Jatropha Genome Database
- JcCB0235361.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0235361.10 - phase: 0 /partial
(353 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42270.1 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1); ATP-de... 425 e-119
AT1G50250.1 | Symbols: FTSH1 | FTSH1 (FtsH protease 1); ATP-depe... 387 e-108
AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-de... 191 4e-49
AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-dependent peptidase/ A... 191 6e-49
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6);... 174 6e-44
AT5G58870.1 | Symbols: ftsh9 | ftsh9 (FtsH protease 9); ATP-depe... 151 6e-37
AT3G47060.1 | Symbols: ftsh7 | ftsh7 (FtsH protease 7); ATP-depe... 150 1e-36
AT2G26140.1 | Symbols: ftsh4 | ftsh4 (FtsH protease 4); ATP-depe... 146 2e-35
AT5G53170.1 | Symbols: FTSH11 | FTSH11 (FtsH protease 11); ATP-d... 141 7e-34
AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protease 3); ATP-depe... 138 7e-33
AT4G23940.1 | Symbols: | FtsH protease, putative | chr4:1243710... 136 2e-32
AT1G07510.1 | Symbols: ftsh10 | ftsh10 (FtsH protease 10); ATP b... 132 3e-31
AT3G02450.1 | Symbols: | cell division protein ftsH, putative |... 129 2e-30
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 129 4e-30
AT3G16290.1 | Symbols: EMB2083 | EMB2083 (embryo defective 2083)... 124 1e-28
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REGULATORY PARTICL... 92 6e-19
AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPase subunit, put... 92 7e-19
AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE TRIPLE... 88 7e-18
AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/ nucle... 87 2e-17
AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PARTICLE TRIPLE-A... 85 8e-17
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (REGULATORY PARTIC... 83 3e-16
AT5G03340.1 | Symbols: | cell division cycle protein 48, putati... 80 2e-15
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | CDC48 (CELL DIVI... 80 2e-15
AT3G53230.1 | Symbols: | cell division cycle protein 48, putati... 80 2e-15
AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTERACTING PROTEIN ... 79 4e-15
AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteasome AAA-ATPase ... 79 5e-15
AT3G04340.1 | Symbols: emb2458 | emb2458 (embryo defective 2458)... 78 9e-15
AT5G52882.1 | Symbols: | ATP binding / nucleoside-triphosphatas... 78 9e-15
AT4G28000.1 | Symbols: | ATP binding / ATPase/ nucleoside-triph... 77 2e-14
AT1G64110.3 | Symbols: | AAA-type ATPase family protein | chr1:... 76 4e-14
AT1G64110.2 | Symbols: | AAA-type ATPase family protein | chr1:... 76 4e-14
AT2G20140.1 | Symbols: | 26S protease regulatory complex subuni... 76 4e-14
AT4G29040.1 | Symbols: RPT2a | RPT2a (regulatory particle AAA-AT... 76 4e-14
AT1G64110.1 | Symbols: | AAA-type ATPase family protein | chr1:... 76 4e-14
AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding / A... 75 5e-14
AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase | chr5:17248563-172... 74 1e-13
AT1G45000.1 | Symbols: | 26S proteasome regulatory complex subu... 74 1e-13
AT1G45000.2 | Symbols: | 26S proteasome regulatory complex subu... 74 2e-13
AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); ATP binding / AT... 73 3e-13
AT3G27120.1 | Symbols: | ATP binding / ATPase/ nucleoside-triph... 70 2e-12
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 70 2e-12
AT2G27600.1 | Symbols: SKD1, VPS4 | SKD1 (SUPPRESSOR OF K+ TRANS... 69 5e-12
AT1G79560.1 | Symbols: EMB1047, FTSH12 | FTSH12 (FTSH PROTEASE 1... 67 1e-11
AT2G45500.2 | Symbols: | ATP binding / nucleoside-triphosphatas... 65 5e-11
AT2G45500.1 | Symbols: | ATP binding / nucleoside-triphosphatas... 65 6e-11
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 64 1e-10
AT3G19740.1 | Symbols: | ATP binding / ATPase/ nucleoside-triph... 63 2e-10
AT2G34560.1 | Symbols: | katanin, putative | chr2:14560266-1456... 63 3e-10
AT2G34560.2 | Symbols: | katanin, putative | chr2:14560266-1456... 63 3e-10
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 63 3e-10
AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP binding / ATPase/ nu... 61 1e-09
AT1G50140.2 | Symbols: | ATP binding / ATPase/ nucleoside-triph... 61 1e-09
AT1G50140.1 | Symbols: | ATP binding / ATPase/ nucleoside-triph... 61 1e-09
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 60 1e-09
AT4G24860.1 | Symbols: | AAA-type ATPase family protein | chr4:... 60 3e-09
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 57 1e-08
AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1); ATP binding /... 57 2e-08
AT4G27680.1 | Symbols: | MSP1 protein, putative / intramitochon... 54 1e-07
AT5G53540.1 | Symbols: | MSP1 protein, putative / intramitochon... 52 6e-07
AT4G04180.1 | Symbols: | AAA-type ATPase family protein | chr4:... 52 8e-07
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 51 1e-06
>AT5G42270.1 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:16902659-16905102 FORWARD
Length = 704
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/350 (66%), Positives = 252/350 (72%), Gaps = 14/350 (4%)
Query: 5 TNPLL-SSNFFGSKIXXXXXXXXXXXXXXXXXLFSTRKSQLAQPILNKKQPISDSLKSIP 63
+NPLL SSNF GS+I + S ++ Q++Q +KS+P
Sbjct: 6 SNPLLLSSNFLGSQIIISAPTPKTTTKSLPFSVISRKRYQISQS--------EKLMKSLP 57
Query: 64 SQXXXXXXXXXXXXPQALALDNSTVPTPPPVIEAQPTKPSASNSSPFSQNLLLTAPKPQS 123
SQ PQALA+ N V P P I A+ P N S F QN+L+TAP PQ+
Sbjct: 58 SQAALAALLFSSSSPQALAV-NEPVQPPAPTITAEAQSP---NLSTFGQNVLMTAPNPQA 113
Query: 124 QSTTDLPEGTQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLID 183
QS+ DLP+GTQWRYSEFLNAVKKGKVERV+FSKDGS LQLTAVD RRATVIVPNDPDLID
Sbjct: 114 QSS-DLPDGTQWRYSEFLNAVKKGKVERVKFSKDGSVLQLTAVDNRRATVIVPNDPDLID 172
Query: 184 ILAMNGVDISVSEGDSGNGLFNFIGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 243
ILAMNGVDISVSEG+ GNGLF+FIGN R Q MDF
Sbjct: 173 ILAMNGVDISVSEGEGGNGLFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDF 232
Query: 244 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 303
GRSKSKFQEVPETGVTF DVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP
Sbjct: 233 GRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 292
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK+KA
Sbjct: 293 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKA 342
>AT1G50250.1 | Symbols: FTSH1 | FTSH1 (FtsH protease 1);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr1:18614398-18616930 REVERSE
Length = 716
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/266 (77%), Positives = 217/266 (81%), Gaps = 6/266 (2%)
Query: 90 TPPPVIEAQPTKPSASNSSPFSQNLLLTAPKPQSQSTTDLPEGTQWRYSEFLNAVKKGKV 149
+P VIE+Q KPS + S F QN +L AP P+S +DLPEG+QWRYSEFLNAVKKGKV
Sbjct: 93 SPSVVIESQAVKPS-TPSPLFIQNEILKAPSPKS---SDLPEGSQWRYSEFLNAVKKGKV 148
Query: 150 ERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGDS-GNGLFNFIG 208
ERVRFSKDGS +QLTAVD RRA+VIVPNDPDLIDILAMNGVDISVSEG+S GN LF IG
Sbjct: 149 ERVRFSKDGSVVQLTAVDNRRASVIVPNDPDLIDILAMNGVDISVSEGESSGNDLFTVIG 208
Query: 209 NXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXX-MDFGRSKSKFQEVPETGVTFADVAGAD 267
N RRAQ MDFGRSKSKFQEVPETGV+FADVAGAD
Sbjct: 209 NLIFPLLAFGGLFLLFRRAQGGPGGGPGGLGGPMDFGRSKSKFQEVPETGVSFADVAGAD 268
Query: 268 QAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAA 327
QAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAA
Sbjct: 269 QAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAA 328
Query: 328 SEFVELFVGVGASRVRDLFEKAKAKA 353
SEFVELFVGVGASRVRDLFEKAK+KA
Sbjct: 329 SEFVELFVGVGASRVRDLFEKAKSKA 354
>AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2);
ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc
ion binding | chr2:13174692-13177064 FORWARD
Length = 695
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 142/230 (61%), Gaps = 9/230 (3%)
Query: 133 TQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVD---GRRATVIVPNDP----DLIDIL 185
++ YS FL + K +V +V ++G+ + AV G R + P +L+ L
Sbjct: 90 SRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKL 149
Query: 186 AMNGVDISV--SEGDSGNGLFNFIGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 243
+D + ++ D G+ LFN IGN RR+ + F
Sbjct: 150 RAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQF 209
Query: 244 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 303
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GAKIPKG LL+GPP
Sbjct: 210 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPP 269
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK A
Sbjct: 270 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 319
>AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-dependent peptidase/
ATPase/ metallopeptidase/ zinc ion binding |
chr1:1960214-1962525 REVERSE
Length = 685
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 143/230 (62%), Gaps = 9/230 (3%)
Query: 133 TQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVD------GRRATVIVPN-DPDLIDIL 185
++ YS FL + KG+VE+V ++G+ + AV +R V +P +L+ L
Sbjct: 83 SRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKL 142
Query: 186 AMNGVDISV--SEGDSGNGLFNFIGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 243
+D + ++ D G+ + N IGN RR+ +
Sbjct: 143 RAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPLQI 202
Query: 244 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 303
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 203 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 262
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK A
Sbjct: 263 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 312
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6);
ATP-dependent peptidase/ ATPase/ metallopeptidase/
peptidase/ zinc ion binding | chr5:4950411-4952777
REVERSE
Length = 688
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 137/227 (60%), Gaps = 16/227 (7%)
Query: 137 YSEFLNAVKKGKVERVRFSKDGSALQLTA---VDGR--RATVIVPNDP-DLIDILAMNGV 190
YS FL +K+ +V++V ++G+ + V G+ R V +P P DL+ + V
Sbjct: 96 YSRFLQHLKENEVKKVDLIENGTVAIVEISNPVVGKIQRVRVNLPGLPVDLVREMKEKNV 155
Query: 191 DISVSEGDSGNG--LFNFIGNXX--XXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRS 246
D + + G L NF+GN RR GRS
Sbjct: 156 DFAAHPMNVNWGAFLLNFLGNLGFPLILLVSLLLTSSSRR------NPAGPNLPFGLGRS 209
Query: 247 KSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTG 306
K+KFQ P TG+TF DVAG D+AK + +E+V+FLK P+K++ALGAKIPKG LL GPPGTG
Sbjct: 210 KAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTG 269
Query: 307 KTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
KTLLA+A+AGEAGVPFFS + SEF+E+FVGVGASR RDLF KAKA +
Sbjct: 270 KTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANS 316
>AT5G58870.1 | Symbols: ftsh9 | ftsh9 (FtsH protease 9);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:23770080-23773719 REVERSE
Length = 806
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 258 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
+TFADVAG D+AK EL+E+V+FLKNPD+Y LGA+ P+G LLVG PGTGKTLLA+AVAGE
Sbjct: 326 ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
+ VPF SC+ASEFVEL+VG+GASRVRDLF +AK +A
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 421
>AT3G47060.1 | Symbols: ftsh7 | ftsh7 (FtsH protease 7);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr3:17332999-17336613 FORWARD
Length = 802
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 258 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
+TFADVAG D+AK EL+E+V+FL+NP+KY LGA+ P+G LLVG PGTGKTLLA+AVAGE
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A VPF SC+ASEFVEL+VG+GASRVRDLF +AK +A
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEA 417
>AT2G26140.1 | Symbols: ftsh4 | ftsh4 (FtsH protease 4);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr2:11131939-11135126 REVERSE
Length = 717
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 80/96 (83%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 314
++ F+DV G D+AK EL+E+V +L++P ++T LG K+PKG LLVGPPGTGKT+LARA+
Sbjct: 221 DSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAI 280
Query: 315 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF AK
Sbjct: 281 AGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAK 316
>AT5G53170.1 | Symbols: FTSH11 | FTSH11 (FtsH protease 11);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:21563023-21567922 REVERSE
Length = 806
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Query: 254 PETGV-TFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLAR 312
PE V TF DV G D AK EL+EVV++LKNP K+T LG K+PKG LL G PGTGKTLLA+
Sbjct: 354 PEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 413
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KA
Sbjct: 414 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 454
>AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protease 3);
ATP-dependent peptidase/ ATPase | chr2:12489911-12492999
REVERSE
Length = 809
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 77/96 (80%)
Query: 258 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
+ F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 378
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
+GVPF S + S+F+E+FVGVG SRVR LF++A+ A
Sbjct: 379 SGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAA 414
>AT4G23940.1 | Symbols: | FtsH protease, putative |
chr4:12437108-12441841 FORWARD
Length = 946
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 84/109 (77%)
Query: 243 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 302
F +SK++ + TGV FADVAG D+A ELQE+V +LKNPD + +G K P G LL GP
Sbjct: 412 FSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGP 471
Query: 303 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 351
PG GKTL+A+A+AGEAGVPF+ A SEFVE+ VGVG++R+RDLF++AK
Sbjct: 472 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKV 520
>AT1G07510.1 | Symbols: ftsh10 | ftsh10 (FtsH protease 10); ATP
binding / ATPase/ metalloendopeptidase/
nucleoside-triphosphatase/ nucleotide binding / zinc ion
binding | chr1:2305689-2309380 FORWARD
Length = 813
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 77/96 (80%)
Query: 258 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
+ F DVAG ++AK E+ E V FL+NP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
+ VPF S + S+F+E+FVGVG SRVR+LF++A+ A
Sbjct: 384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCA 419
>AT3G02450.1 | Symbols: | cell division protein ftsH, putative |
chr3:502876-505030 REVERSE
Length = 622
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 73/93 (78%)
Query: 258 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
V F DV G D AK EL E+V L+ Y LGA++P+G LLVGPPGTGKTLLARAVAGE
Sbjct: 331 VGFDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGE 390
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
AGVPFFS +ASEFVELFVG GA+R+RDLF A+
Sbjct: 391 AGVPFFSVSASEFVELFVGRGAARIRDLFNAAR 423
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE
Length = 855
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 243 FGRSKSKFQEVPE-TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 301
G+S++KF E TGVTF D AG + K ELQE+V LKN +++ G PKG LL G
Sbjct: 297 LGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHG 356
Query: 302 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
PPGTGKTLLA+A+AGEAG+PFF+ ++FVE+FVGV ASRV+DLF +++ A
Sbjct: 357 PPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYA 408
>AT3G16290.1 | Symbols: EMB2083 | EMB2083 (embryo defective 2083);
ATP binding / ATP-dependent peptidase/ ATPase/
metalloendopeptidase/ metallopeptidase/
nucleoside-triphosphatase/ nucleotide binding /
serine-type endopeptidase | chr3:5521187-5524995 REVERSE
Length = 876
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
Query: 246 SKSKFQEVPETGV--TFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 303
S + E E GV F DVAG + +LEL+E+V F + + Y G KIP G LL GPP
Sbjct: 393 SNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPP 452
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
G GKTLLA+AVAGEAGV FFS +AS+FVE++VGVGASRVR L+++A+ A
Sbjct: 453 GVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENA 502
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REGULATORY PARTICLE
TRIPLE-A ATPASE 6A); ATPase | chr5:6752144-6754918
FORWARD
Length = 419
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 249 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 307
K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 308 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
TLLARAVA F + SE V+ ++G G+ VR+LF A+ A
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
>AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPase subunit,
putative | chr5:6756915-6759550 FORWARD
Length = 419
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 249 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 307
K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 308 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
TLLARAVA F + SE V+ ++G G+ VR+LF A+ A
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
>AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE TRIPLE-A
1A); ATPase | chr1:20065921-20068324 REVERSE
Length = 426
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
VT+ DV G + +++EVV+ + +P+K+ LG PKG L GPPGTGKTLLARAVA
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAK 352
F SE V+ +VG GA VR+LF+ A++K
Sbjct: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSK 260
>AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/
nucleoside-triphosphatase/ nucleotide binding /
peptidyl-prolyl cis-trans isomerase |
chr1:20074212-20077235 REVERSE
Length = 598
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 259 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
T++D+ G + +++EVV+ + +P+K+ LG PKG L GPPG+GKTL+ARAVA
Sbjct: 337 TYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANR 396
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAK 352
G F SE V+ ++G GA VR+LF+ A++K
Sbjct: 397 TGACFIRVVGSELVQKYIGEGARMVRELFQMARSK 431
>AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PARTICLE TRIPLE-A
ATPASE 3); ATPase | chr5:23569155-23571116 FORWARD
Length = 408
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V++ D+ G D K E++E V+ L + + Y +G P+G LL GPPGTGKT+LA+AVA
Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
F SEFV+ ++G G VRD+F AK A
Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 248
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (REGULATORY PARTICLE
TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding |
chr3:1603540-1605993 FORWARD
Length = 424
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 246 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 303
S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG LL GPP
Sbjct: 155 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPP 214
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GTGKTL+ARA A + F A + V++F+G GA VRD F+ AK KA
Sbjct: 215 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKA 264
>AT5G03340.1 | Symbols: | cell division cycle protein 48, putative
/ CDC48, putative | chr5:810091-813133 REVERSE
Length = 810
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 252 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 310
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 473 EVP--NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 311 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A+A+A E F S E + ++ G + VR++F+KA+ A
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
E G FF E + G S +R FE+A+ A
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA 300
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | CDC48 (CELL
DIVISION CYCLE 48); ATPase/ identical protein binding |
chr3:3019494-3022832 FORWARD
Length = 809
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 252 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 310
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 473 EVP--NVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 311 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A+A+A E F S E + ++ G + VR++F+KA+ A
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 573
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
E G FF E + G S +R FE+A+ A
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA 300
>AT3G53230.1 | Symbols: | cell division cycle protein 48, putative
/ CDC48, putative | chr3:19723416-19726489 FORWARD
Length = 815
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 252 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 310
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 474 EVP--NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 311 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A+A+A E F S E + ++ G + VR++F+KA+ A
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA 574
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
E G FF E + G S +R FE+A+ A
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA 301
>AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTERACTING PROTEIN
111); ATPase/ calmodulin binding |
chr3:20993869-20998531 REVERSE
Length = 1022
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 242 DFGRSKSKFQ---------EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGA 291
DF +K+K + EVP+ V + DV G ++ K +L E V++ K+ D + +G
Sbjct: 698 DFENAKTKIRPSAMREVILEVPK--VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGT 755
Query: 292 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 351
+ P G L+ GPPG KTL+ARAVA EA + F + E +VG VR LF KA+A
Sbjct: 756 RPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARA 815
Query: 352 KA 353
A
Sbjct: 816 NA 817
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 249 KFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 308
+F E G + + G + L++++D + ++LG + KG L+ GPPGTGKT
Sbjct: 373 QFDEGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKT 432
Query: 309 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
LAR A +GV FFS E + ++G + ++F A
Sbjct: 433 SLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSA 473
>AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteasome AAA-ATPase
subunit RPT5B); ATPase/ calmodulin binding |
chr1:2936675-2939258 REVERSE
Length = 423
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 246 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 303
S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG LL GPP
Sbjct: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPP 213
Query: 304 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GTGKTL+ARA A + F A + V++F+G GA VRD F AK K+
Sbjct: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKS 263
>AT3G04340.1 | Symbols: emb2458 | emb2458 (embryo defective 2458);
ATP binding / ATPase/ metalloendopeptidase/
nucleoside-triphosphatase/ nucleotide binding |
chr3:1146943-1153341 REVERSE
Length = 1320
Score = 77.8 bits (190), Expect = 9e-15, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 249 KFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 308
+ + V + + A + + E+ EVV FL+NP + +GA+ P+G L+VG GTGKT
Sbjct: 772 RMKRVKNPPIPLKNFASIESMREEINEVVAFLQNPKAFQEMGARAPRGVLIVGERGTGKT 831
Query: 309 LLARAVAGEAGVPFFSCAASEF-VELFVGVGASRVRDLFEKAK 350
LA A+A EA VP + A E L+VG A+ VR+LF+ A+
Sbjct: 832 SLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTAR 874
>AT5G52882.1 | Symbols: | ATP binding / nucleoside-triphosphatase/
nucleotide binding | chr5:21434155-21438362 REVERSE
Length = 829
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 313
E GVTFAD+ D+ K LQE+V L+ PD + K +G LL GPPGTGKT+LA+A
Sbjct: 511 EIGVTFADIGSLDETKDSLQELVMLPLRRPDLFQGGLLKPCRGILLFGPPGTGKTMLAKA 570
Query: 314 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
+A EAG F + + S + G VR LF
Sbjct: 571 IANEAGASFINVSMSTITSKWFGEDEKNVRALF 603
>AT4G28000.1 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr4:13925456-13929280 FORWARD
Length = 830
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 313
E GVTFAD+ D+ K LQE+V L+ PD + K +G LL GPPGTGKT++A+A
Sbjct: 512 EIGVTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKA 571
Query: 314 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
+A EAG F + + S + G VR LF
Sbjct: 572 IANEAGASFINVSMSTITSKWFGEDEKNVRALF 604
>AT1G64110.3 | Symbols: | AAA-type ATPase family protein |
chr1:23796887-23801255 REVERSE
Length = 827
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 313
E VTF D+ D+ K LQE+V L+ PD +T K +G LL GPPGTGKT+LA+A
Sbjct: 513 EINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKA 572
Query: 314 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
+A EAG F + + S + G VR LF
Sbjct: 573 IAKEAGASFINVSMSTITSKWFGEDEKNVRALF 605
>AT1G64110.2 | Symbols: | AAA-type ATPase family protein |
chr1:23796887-23801255 REVERSE
Length = 829
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 313
E VTF D+ D+ K LQE+V L+ PD +T K +G LL GPPGTGKT+LA+A
Sbjct: 515 EINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKA 574
Query: 314 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
+A EAG F + + S + G VR LF
Sbjct: 575 IAKEAGASFINVSMSTITSKWFGEDEKNVRALF 607
>AT2G20140.1 | Symbols: | 26S protease regulatory complex subunit
4, putative | chr2:8692736-8694837 FORWARD
Length = 443
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 259 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
++AD+ G + E++E V+ L +P+ Y +G K PKG +L G PGTGKTLLA+AVA
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
F SE ++ ++G G VR+LF A
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
>AT4G29040.1 | Symbols: RPT2a | RPT2a (regulatory particle
AAA-ATPase 2a); ATPase | chr4:14312369-14314386 FORWARD
Length = 443
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 259 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 317
++AD+ G + E++E V+ L +P+ Y +G K PKG +L G PGTGKTLLA+AVA
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 318 AGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
F SE ++ ++G G VR+LF A
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVA 277
>AT1G64110.1 | Symbols: | AAA-type ATPase family protein |
chr1:23796887-23801240 REVERSE
Length = 824
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 313
E VTF D+ D+ K LQE+V L+ PD +T K +G LL GPPGTGKT+LA+A
Sbjct: 510 EINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKA 569
Query: 314 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
+A EAG F + + S + G VR LF
Sbjct: 570 IAKEAGASFINVSMSTITSKWFGEDEKNVRALF 602
>AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr3:231787-235057 FORWARD
Length = 820
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 257 GVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 315
G TF D G + EL+ V F + NP+ + +G K P G L GPPG GKT LA A+A
Sbjct: 229 GPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIA 288
Query: 316 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
EAGVPF+ +A+E + G +R+LF KA A
Sbjct: 289 NEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTA 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 246 SKSKFQEVPETGVTFADVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPG 304
++ F VP+ V + DV G D +L+ +V +K PD Y A G + G LL GPPG
Sbjct: 515 TREGFSIVPD--VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPG 572
Query: 305 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
GKTL+A+A A EAG F +E + +VG +R LF++A+ A
Sbjct: 573 CGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCA 621
>AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase |
chr5:17248563-17251014 REVERSE
Length = 399
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
++++ V G EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
F +S ++ ++G A +R++F A+
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>AT1G45000.1 | Symbols: | 26S proteasome regulatory complex subunit
p42D, putative | chr1:17009220-17011607 FORWARD
Length = 399
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
++++ V G EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
F +S ++ ++G A +R++F A+
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>AT1G45000.2 | Symbols: | 26S proteasome regulatory complex subunit
p42D, putative | chr1:17009220-17011607 FORWARD
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
++++ V G EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
F +S ++ ++G A +R++F A+
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAR 229
>AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr1:688057-692453 REVERSE
Length = 941
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DV G + K + + V L + D +++ G + G LL GPPGTGKTLLA+AVA
Sbjct: 655 VKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 713
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 351
E + F S E + +++G VRD+FEKA++
Sbjct: 714 ECSLNFLSVKGPELINMYIGESEKNVRDIFEKARS 748
>AT3G27120.1 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr3:10000248-10003265 REVERSE
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLARAVA 315
V + D+AG + AK + E+V + L PD + G + P KG LL GPPGTGKT++ +A+A
Sbjct: 196 VRWDDIAGLEHAKKCVTEMVIWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIGKAIA 253
Query: 316 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAK 352
GEA FF +AS ++G G VR LF A +
Sbjct: 254 GEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCR 290
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | ERH3 (ECTOPIC ROOT HAIR 3); ATP binding /
nucleoside-triphosphatase/ nucleotide binding |
chr1:30205499-30208050 REVERSE
Length = 523
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 257 GVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLARAV 314
GV + DVAG +AK L+E V L P+ + G + P KG L+ GPPGTGKTLLA+AV
Sbjct: 235 GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAV 292
Query: 315 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
A E G FF+ +++ + G VR LF+ A+A A
Sbjct: 293 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYA 331
>AT2G27600.1 | Symbols: SKD1, VPS4 | SKD1 (SUPPRESSOR OF K+
TRANSPORT GROWTH DEFECT1); ATP binding /
nucleoside-triphosphatase/ nucleotide binding |
chr2:11781226-11783730 FORWARD
Length = 435
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLARAVA 315
+ ++DVAG + AK LQE V +K P +T G + P + LL GPPGTGK+ LA+AVA
Sbjct: 129 IKWSDVAGLESAKQALQEAVILPVKFPQFFT--GKRRPWRAFLLYGPPGTGKSYLAKAVA 186
Query: 316 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
EA FFS ++S+ V ++G V +LFE A+ A
Sbjct: 187 TEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESA 224
>AT1G79560.1 | Symbols: EMB1047, FTSH12 | FTSH12 (FTSH PROTEASE 12);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr1:29926976-29932308 FORWARD
Length = 1008
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 135 WRY------SEFLNAVKKGKVERVRFSKDGSALQLTAVDG--RRATVIVPNDPDLIDILA 186
WRY + FL + +V V F++D L +T +G V +P DP L + +
Sbjct: 354 WRYRPKLPYTYFLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETIC 413
Query: 187 MNGVDISVSEGDS-------------GNGLFNFIGNXXXXXXXXXXXXXXXRRAQXXXXX 233
GV++ + + G + FI + Q
Sbjct: 414 NAGVEVDLLQKRQIHYFMKVFIALLPGILILWFIRESAMLLLITSKRFLYKKYNQLFDMA 473
Query: 234 XXXXXX--XMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGA 291
D +KS ++EV V G D L L E++ ++ NP +Y
Sbjct: 474 YAENFILPVGDVSETKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYEKDV 523
Query: 292 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 351
+G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+++ ++F A+
Sbjct: 524 AFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAAKINEMFSIARR 582
Query: 352 KA 353
A
Sbjct: 583 NA 584
>AT2G45500.2 | Symbols: | ATP binding / nucleoside-triphosphatase/
nucleotide binding | chr2:18749973-18752636 REVERSE
Length = 487
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DVAG + AK L E+V K D +T L + +G LL GPPG GKT+LA+AVA
Sbjct: 213 VKWDDVAGLNGAKQALLEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVAS 271
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
E+ FF+ +AS +VG V+ LF+ A
Sbjct: 272 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVA 304
>AT2G45500.1 | Symbols: | ATP binding / nucleoside-triphosphatase/
nucleotide binding | chr2:18749973-18752636 REVERSE
Length = 491
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
V + DVAG + AK L E+V K D +T L + +G LL GPPG GKT+LA+AVA
Sbjct: 217 VKWDDVAGLNGAKQALLEMVILPAKRRDLFTGL-RRPARGLLLFGPPGNGKTMLAKAVAS 275
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
E+ FF+ +AS +VG V+ LF+ A
Sbjct: 276 ESQATFFNVSASSLTSKWVGEAEKLVKTLFQVA 308
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE
Length = 1252
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
+ GV+F+D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+
Sbjct: 944 DIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAK 1003
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
AVA EAG F + + S + G G V+ +F A
Sbjct: 1004 AVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLA 1040
>AT3G19740.1 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr3:6855944-6862930 REVERSE
Length = 1001
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
E GV F D+ + K L E+V ++ P+ +T P KG LL GPPGTGKTLLA+
Sbjct: 706 EIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAK 765
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
A+A EAG F S S + G + LF
Sbjct: 766 ALATEAGANFISITGSTLTSKWFGDAEKLTKALF 799
>AT2G34560.1 | Symbols: | katanin, putative |
chr2:14560266-14562695 FORWARD
Length = 384
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 258 VTFADVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
+ + + G + AK L+E VV +K P + L KG LL GPPGTGKT+LA+AVA
Sbjct: 100 IKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPW-KGILLFGPPGTGKTMLAKAVAT 158
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
E FF+ +AS V + G +R LF+ A+ A
Sbjct: 159 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHA 195
>AT2G34560.2 | Symbols: | katanin, putative |
chr2:14560266-14562695 FORWARD
Length = 393
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 258 VTFADVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
+ + + G + AK L+E VV +K P + L KG LL GPPGTGKT+LA+AVA
Sbjct: 109 IKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPW-KGILLFGPPGTGKTMLAKAVAT 167
Query: 317 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
E FF+ +AS V + G +R LF+ A+ A
Sbjct: 168 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHA 204
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE
Length = 1265
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
+ GV+F D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+
Sbjct: 957 DIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAK 1016
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
AVA EAG F + + S + G G V+ +F A
Sbjct: 1017 AVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLA 1053
>AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr2:1117595-1120361 FORWARD
Length = 603
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 252 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 310
E+P+ VT+ DV G K +LQ+ V++ +K+ + +G +G LL GPPG KT L
Sbjct: 279 EIPK--VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTL 336
Query: 311 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
A+A A A FFS + +E ++VG G + +R+ F++A+
Sbjct: 337 AKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRAR 376
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 261 ADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAG 319
A++ G ++A L+E++ F + P + LG K P+G LL GPPGTGKT L RAV E
Sbjct: 22 AEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD 81
Query: 320 VPFFSCAASEFVELFVGVGASRVRDLFEKAKAKA 353
+ G +R+ F +A + A
Sbjct: 82 AHLIVLSPHSVHRAHAGESEKVLREAFAEASSHA 115
>AT1G50140.2 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr1:18569921-18578663 REVERSE
Length = 981
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
E GV F D+ + K L E+V ++ P+ + P KG LL GPPGTGKTLLA+
Sbjct: 686 EIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAK 745
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
A+A EAG F S S + G + LF
Sbjct: 746 ALATEAGANFISITGSTLTSKWFGDAEKLTKALF 779
>AT1G50140.1 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding |
chr1:18569921-18578663 REVERSE
Length = 1003
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
E GV F D+ + K L E+V ++ P+ + P KG LL GPPGTGKTLLA+
Sbjct: 708 EIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAK 767
Query: 313 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLF 346
A+A EAG F S S + G + LF
Sbjct: 768 ALATEAGANFISITGSTLTSKWFGDAEKLTKALF 801
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD
Length = 1210
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 316
+ F D+ G + +L+E+V F L P+ + + P+G LL GPPGTGKTL+ARA+A
Sbjct: 378 INFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALAC 437
Query: 317 EAG-----VPFFSCAASEFVELFVGVGASRVRDLFEKAK 350
A V F+ ++ + +VG +++ LFE+A+
Sbjct: 438 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQ 476
>AT4G24860.1 | Symbols: | AAA-type ATPase family protein |
chr4:12801580-12808190 REVERSE
Length = 1122
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLARAVA 315
VTF D+ ++ K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+AVA
Sbjct: 817 VTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVA 876
Query: 316 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
EA F + + S + G G V+ +F A
Sbjct: 877 KEADANFINISMSSITSKWFGEGEKYVKAVFSLA 910
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE
Length = 1224
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
+ GV+F+D+ + K L+E+V L+ P+ + P KG LL GPPGTGKT+LA+
Sbjct: 944 DIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAK 1003
Query: 313 AVAGEAGVPFFSCAAS 328
AVA EAG F + + S
Sbjct: 1004 AVATEAGANFINISMS 1019
>AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1); ATP binding /
ATPase/ binding / nucleoside-triphosphatase/ nucleotide
binding / protein binding | chr5:2735925-2742731 FORWARD
Length = 1130
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 242 DFGRSKSKFQEVPETGVT----------FADVAGADQAKLELQEVVDFLKNPDKYTALGA 291
DF R+ F V +T + DV G K ++E+++ P K+ + A
Sbjct: 815 DFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIEL---PSKFPKIFA 871
Query: 292 KIP----KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFE 347
K P LL GPPG GKT + A A + F S E + ++G VRD+F
Sbjct: 872 KSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 931
Query: 348 KAKAKA 353
KA A A
Sbjct: 932 KAAAAA 937
>AT4G27680.1 | Symbols: | MSP1 protein, putative /
intramitochondrial sorting protein, putative |
chr4:13821263-13823083 FORWARD
Length = 398
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKI--PKGCLLVGPPGTGKTLLARAV 314
V F + G + K L E+V LK P+ + A G + KG LL GPPGTGKT+LA+A+
Sbjct: 81 VEFGSIGGLETIKQALYELVILPLKRPELF-AYGKLLGPQKGVLLYGPPGTGKTMLAKAI 139
Query: 315 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
A E+G F + S + + G V +F A
Sbjct: 140 AKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLA 174
>AT5G53540.1 | Symbols: | MSP1 protein, putative /
intramitochondrial sorting protein, putative |
chr5:21749561-21751099 REVERSE
Length = 403
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKI--PKGCLLVGPPGTGKTLLARAV 314
V F + G + K L E+V LK P+ + A G + KG LL GPPGTGKT+LA+A+
Sbjct: 84 VEFGSIGGLESIKQALYELVILPLKRPELF-AYGKLLGPQKGVLLYGPPGTGKTMLAKAI 142
Query: 315 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA 349
A E+ F + S + + G V +F A
Sbjct: 143 ARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLA 177
>AT4G04180.1 | Symbols: | AAA-type ATPase family protein |
chr4:2020471-2023673 FORWARD
Length = 609
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 258 VTFADVAGADQAKLELQEVVDF-LKNPDKY--------TALGAKIPKGCLLVGPPGTGKT 308
+++ ++AG DQ K E+++ + L +P+ Y + + P+ L GPPGTGKT
Sbjct: 316 ISWDNIAGYDQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPGTGKT 375
Query: 309 LLARAVAGEAGVPFF 323
AR +A +AG+P
Sbjct: 376 SCARVIANQAGIPLL 390
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE
Length = 1025
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 255 ETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLLAR 312
E GVTF D+ + K L+E+V + P+ + P G LL GP GTGKT+LA+
Sbjct: 729 EIGVTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAK 788
Query: 313 AVAGEAGVPFFSCAASEF 330
AVA EAG + + S +
Sbjct: 789 AVATEAGANLINMSMSRW 806