Jatropha Genome Database

JcCB0232511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0232511.10 + phase: 0 
         (236 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10050.1 | Symbols: OMR1 | OMR1 (L-O-METHYLTHREONINE RESISTAN...   390   e-109

>AT3G10050.1 | Symbols: OMR1 | OMR1 (L-O-METHYLTHREONINE RESISTANT
           1); L-threonine ammonia-lyase | chr3:3099164-3101741
           REVERSE
          Length = 592

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/236 (77%), Positives = 205/236 (86%)

Query: 1   MFEEKRSIXXXXXXXXXXXXXXYCKYYGLQGKNVVAITSGANMNFDKLRVVTELANVGRQ 60
           MFEEKR+I              YCKYYGL+  NVVAITSGANMNFDKLR+VTELANVGRQ
Sbjct: 357 MFEEKRNILEPAGALALAGAEAYCKYYGLKDVNVVAITSGANMNFDKLRIVTELANVGRQ 416

Query: 61  QEAVLATVMPEEPGMFKRFCELVGPMNITEFKYRCNSEKEAVVLYSVGLHTVSEIEALQQ 120
           QEAVLAT+MPE+PG FK+FCELVGPMNI+EFKYRC+SEKEAVVLYSVG+HT  E++ALQ+
Sbjct: 417 QEAVLATLMPEKPGSFKQFCELVGPMNISEFKYRCSSEKEAVVLYSVGVHTAGELKALQK 476

Query: 121 RMESSQLRTYNLTSSDLVKDHLRYLMGGRLNVQNEVLCHFVFPERPGALMKFLDTFSPRW 180
           RMESSQL+T NLT+SDLVKDHLRYLMGGR  V +EVLC F FPERPGALM FLD+FSPRW
Sbjct: 477 RMESSQLKTVNLTTSDLVKDHLRYLMGGRSTVGDEVLCRFTFPERPGALMNFLDSFSPRW 536

Query: 181 NISLFHYRGQGETGANVLVGIQVPEHEMDEFHSRANSVGYDYDLVTDDDNFQLLMH 236
           NI+LFHYRGQGETGANVLVGIQVPE EM+EF +RA ++GYDY LV+DDD F+LLMH
Sbjct: 537 NITLFHYRGQGETGANVLVGIQVPEQEMEEFKNRAKALGYDYFLVSDDDYFKLLMH 592