Jatropha Genome Database

JcCB0231041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0231041.10 - phase: 0 /partial
         (202 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58560.1 | Symbols:  | phosphatidate cytidylyltransferase fam...   293   5e-80
AT5G04490.1 | Symbols: VTE5 | VTE5 (vitamin E pathway gene5); ph...   183   5e-47

>AT5G58560.1 | Symbols:  | phosphatidate cytidylyltransferase family
           protein | chr5:23670513-23672570 FORWARD
          Length = 307

 Score =  293 bits (750), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 137/187 (73%), Positives = 158/187 (84%)

Query: 1   KLNRKLVHISIGLVFMLCWPLFSSGHRGAILAALTPGINIFRMLILGLGIWKDEATVKSM 60
           KL RKLVHI+IGLVFMLCWPLFSSG +GA+ A+L PG+NI RML+LGLG++ DE T+KSM
Sbjct: 106 KLIRKLVHINIGLVFMLCWPLFSSGIQGALFASLVPGLNIVRMLLLGLGVYHDEGTIKSM 165

Query: 61  SRFGDHRELLKGPLYYALTITLTCAIYWRTSPITIAAICNLCAGDGMADIVGRRFGNHKL 120
           SR GD RELLKGPLYY L+IT  C  YW++SPI IA ICNLCAGDGMADIVGRRFG  KL
Sbjct: 166 SRHGDRRELLKGPLYYVLSITSACIYYWKSSPIAIAVICNLCAGDGMADIVGRRFGTEKL 225

Query: 121 PYNTNKSIAGSVAMALAGFLASITYMHYFASFGYVRESWEMTMGFLVVSIASAIVESLPI 180
           PYN NKS AGS+ MA AGFLAS+ YM+YFASFGY+ +S  M + FLV+SIASA+VESLPI
Sbjct: 226 PYNKNKSFAGSIGMATAGFLASVAYMYYFASFGYIEDSGGMILRFLVISIASALVESLPI 285

Query: 181 STQLDDN 187
           ST +DDN
Sbjct: 286 STDIDDN 292


>AT5G04490.1 | Symbols: VTE5 | VTE5 (vitamin E pathway gene5);
           phosphatidate cytidylyltransferase/ phytol kinase |
           chr5:1279867-1281587 FORWARD
          Length = 304

 Score =  183 bits (465), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/188 (46%), Positives = 127/188 (67%), Gaps = 1/188 (0%)

Query: 1   KLNRKLVHISIGLVFMLCWPLFSSGHRGAILAALTPGINIFRMLILGLGIWKDEATVKSM 60
            L+RKLVHI  GL+F+L WP+FS        AA  P +N  R++I GL I  +   +KS+
Sbjct: 100 SLSRKLVHILSGLLFVLAWPIFSGSTEARYFAAFVPLVNGLRLVINGLSISPNSMLIKSV 159

Query: 61  SRFGDHRELLKGPLYYALTITLTCAIYWRTSPITIAAICNLCAGDGMADIVGRRFGNHKL 120
           +R G   ELLKGPL+Y L +  +   +WR SPI + ++  +C GDG+ADI+GR+FG+ K+
Sbjct: 160 TREGRAEELLKGPLFYVLALLFSAVFFWRESPIGMISLAMMCGGDGIADIMGRKFGSTKI 219

Query: 121 PYNTNKSIAGSVAMALAGFLASITYMHYFASFGYVRESWEMTMGFL-VVSIASAIVESLP 179
           PYN  KS AGS++M + GF  SI  ++Y++S GY+  +WE T+  + +VS+ + +VESLP
Sbjct: 220 PYNPRKSWAGSISMFIFGFFISIALLYYYSSLGYLHMNWETTLQRVAMVSMVATVVESLP 279

Query: 180 ISTQLDDN 187
           I+ QLDDN
Sbjct: 280 ITDQLDDN 287