Jatropha Genome Database

JcCB0229861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229861.10 + phase: 0 /pseudo/partial
         (429 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxyla...   566   e-162

>AT2G37690.1 | Symbols:  | phosphoribosylaminoimidazole carboxylase,
           putative / AIR carboxylase, putative |
           chr2:15806111-15810240 FORWARD
          Length = 642

 Score =  566 bits (1460), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 262/322 (81%), Positives = 292/322 (90%)

Query: 106 RCGVLTVEIEHVDVATLEKLEQQGIDCQPKASTIKIIQDKYLQKVHFSRHGIPLPEFMQI 165
           RCGVLTVEIEHVDV TLEKLE+QG+DCQPKASTI+IIQDKY+QKVHFS+HGIPLPEFM+I
Sbjct: 151 RCGVLTVEIEHVDVDTLEKLEKQGVDCQPKASTIRIIQDKYMQKVHFSQHGIPLPEFMEI 210

Query: 166 NNLEGAKKAGDLFGYPLMIKSKRLAYDGRGNAVAKSEEELSFAVAALGGFDRGLYVEKWA 225
           +++EGA+KAG+LFGYPLMIKSKRLAYDGRGNAVA +++ELS AV ALGGF RGLY+EKWA
Sbjct: 211 SDIEGARKAGELFGYPLMIKSKRLAYDGRGNAVANNQDELSSAVTALGGFSRGLYIEKWA 270

Query: 226 PFVKELAVIVARGRDNSIFCYPVVETIHKENICHIVKAPADVPWKIRKLATDVAHEAVSS 285
           PFVKELAVIVARGRD S+ CYPVVETIH++NICHIVKAPADVPWKI KLATDVA +AV S
Sbjct: 271 PFVKELAVIVARGRDGSMVCYPVVETIHRDNICHIVKAPADVPWKINKLATDVAQKAVGS 330

Query: 286 LEGAGVFAVELFLTSEGQILLNEVAPRPHNSGHHTIESCYTSQFEQHLRAVVGLPLGDPS 345
           LEGAGVFAVELFLT + QILLNEVAPRPHNSGH TIE CYTSQFEQHLRAVVGLPLGDPS
Sbjct: 331 LEGAGVFAVELFLTEDSQILLNEVAPRPHNSGHQTIECCYTSQFEQHLRAVVGLPLGDPS 390

Query: 346 MKTPAAIMYNLLGEDEGEPGFLLAQQLIGRALNVQGATVHWYDKPEMRKQRKMGHITITG 405
           M+TPA+IMYN+LGED+GE GF LA +LI RAL + GA+VHWYDKPEMRKQRKMGHIT+ G
Sbjct: 391 MRTPASIMYNILGEDDGEAGFKLAHRLIARALCIPGASVHWYDKPEMRKQRKMGHITLVG 450

Query: 406 PSMGIVEARLNSMLKEQGPDGH 427
            SMGI+E RL  +L EQ    H
Sbjct: 451 QSMGILEQRLQCILSEQSHQVH 472