Jatropha Genome Database

JcCB0229681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229681.10 + phase: 0 
         (90 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63890.1 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);...   163   2e-41
AT5G63890.2 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);...   163   2e-41

>AT5G63890.1 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);
           histidinol dehydrogenase | chr5:25565600-25567879
           REVERSE
          Length = 452

 Score =  163 bits (412), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/86 (87%), Positives = 83/86 (96%)

Query: 1   MGQWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKNLGPYVAT 60
           +G WTPESVGDYASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+NLGPYVAT
Sbjct: 366 IGPWTPESVGDYASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVAT 425

Query: 61  MAEVEGLEAHKRAVTLRLADIEARKV 86
           MAE+EGL+AHKRAVTLRL DIEA+++
Sbjct: 426 MAEIEGLDAHKRAVTLRLKDIEAKQL 451


>AT5G63890.2 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);
           histidinol dehydrogenase | chr5:25565600-25568104
           REVERSE
          Length = 466

 Score =  163 bits (412), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/86 (87%), Positives = 83/86 (96%)

Query: 1   MGQWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLTEEGLKNLGPYVAT 60
           +G WTPESVGDYASGTNHVLPTYGYARMY GVSLDSFLK+MTVQSLTEEGL+NLGPYVAT
Sbjct: 380 IGPWTPESVGDYASGTNHVLPTYGYARMYSGVSLDSFLKFMTVQSLTEEGLRNLGPYVAT 439

Query: 61  MAEVEGLEAHKRAVTLRLADIEARKV 86
           MAE+EGL+AHKRAVTLRL DIEA+++
Sbjct: 440 MAEIEGLDAHKRAVTLRLKDIEAKQL 465