Jatropha Genome Database

JcCB0229331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229331.10 - phase: 0 
         (134 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43600.1 | Symbols: ATAAH-2, UAH | UAH (UREIDOGLYCOLATE AMIDO...   205   5e-54
AT4G20070.1 | Symbols: ATAAH | ATAAH (Arabidopsis thaliana Allan...    56   5e-09

>AT5G43600.1 | Symbols: ATAAH-2, UAH | UAH (UREIDOGLYCOLATE
           AMIDOHYDROLASE); allantoate deiminase/ metallopeptidase
           | chr5:17512651-17515280 FORWARD
          Length = 476

 Score =  205 bits (522), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 102/132 (77%), Positives = 109/132 (82%), Gaps = 1/132 (0%)

Query: 1   MEDFSGYPIHEPFHXXXXXXXXXXXXVDDHGLQKQIDELSSFSDTPAPSVTRVLYTEKDV 60
           MEDFSGYPIHEP              VD  GLQ QIDELSSFSD P+PSVTRVLYT+KDV
Sbjct: 36  MEDFSGYPIHEPGQFGSINLASSLS-VDAPGLQNQIDELSSFSDAPSPSVTRVLYTDKDV 94

Query: 61  LARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGV 120
            ARRY+KNLM L+GL+VREDAVGNIFG+WDG EP L AVATGSHIDAIP+SGKYDGVVGV
Sbjct: 95  SARRYVKNLMALAGLTVREDAVGNIFGKWDGLEPNLPAVATGSHIDAIPYSGKYDGVVGV 154

Query: 121 LGAIEAINVLKR 132
           LGAIEAINVLKR
Sbjct: 155 LGAIEAINVLKR 166


>AT4G20070.1 | Symbols: ATAAH | ATAAH (Arabidopsis thaliana
           Allantoate Amidohydrolase); allantoate deiminase/
           metallopeptidase | chr4:10861548-10864529 FORWARD
          Length = 525

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 35  QIDELSSFSDTPAPSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEP 94
           ++ EL   SD  A  + R   +   + A   I+  M  +GLS   D +GN+ GR +    
Sbjct: 99  RLHELGQVSDA-ATHLERTFMSPASIRAIPLIRGWMEDAGLSTWVDYMGNVHGRVEPKNG 157

Query: 95  ELAAVATGSHIDAIPFSGKYDGVVGVLGAIEAINVLK 131
              A+  GSH+D +  +GKYDG +G++ AI A+ VLK
Sbjct: 158 SSQALLIGSHMDTVIDAGKYDGSLGIISAISALKVLK 194