Jatropha Genome Database

JcCB0226591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0226591.10 + phase: 1 /partial
         (213 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18490.1 | Symbols:  | unknown protein | chr1:6367116-6368640...   305   2e-83
AT5G39890.1 | Symbols:  | unknown protein | chr5:15974543-159760...   184   4e-47
AT5G15120.1 | Symbols:  | unknown protein | chr5:4898814-4900351...   178   2e-45
AT2G42670.2 | Symbols:  | unknown protein | chr2:17772004-177737...   166   1e-41
AT2G42670.1 | Symbols:  | unknown protein | chr2:17772004-177737...   165   2e-41
AT3G58670.2 | Symbols:  | unknown protein | chr3:21703693-217053...   157   6e-39
AT3G58670.1 | Symbols:  | unknown protein | chr3:21703693-217053...   157   6e-39

>AT1G18490.1 | Symbols:  | unknown protein | chr1:6367116-6368640
           FORWARD
          Length = 282

 Score =  305 bits (780), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 141/215 (65%), Positives = 174/215 (80%), Gaps = 3/215 (1%)

Query: 1   TVRPADVGLKEENPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCIFCFPTSS 60
           +V PADVGL+E + DDDRG+G+ G++R +R  RWAQPIT++DI+ECD+FTMCIFCFPTSS
Sbjct: 67  SVSPADVGLEEVSQDDDRGYGVSGVSRFNRVGRWAQPITFLDIHECDTFTMCIFCFPTSS 126

Query: 61  VIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKES--GNPPVKLAKLAVDKVLTA 118
           VIPLHDHP M VFSKILYGSLHVKAYDWVEP CI+   +   G+ P +LAKL  DKV+T 
Sbjct: 127 VIPLHDHPEMAVFSKILYGSLHVKAYDWVEPPCIITQDKGVPGSLPARLAKLVSDKVITP 186

Query: 119 PCGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNG-S 177
                 LYPK+GGNLHCFTA+TPCAVLDIL+P Y+E VGR CSYY DYP+S F+  NG  
Sbjct: 187 QSEIPALYPKTGGNLHCFTALTPCAVLDILSPPYKESVGRSCSYYMDYPFSTFALENGMK 246

Query: 178 ELGDGKEEDYAWLAEIETPDNLYMRPGIYTGPAVN 212
           ++ +GKE++YAWL +I+TPD+L+MRPG YTGP + 
Sbjct: 247 KVDEGKEDEYAWLVQIDTPDDLHMRPGSYTGPTIR 281


>AT5G39890.1 | Symbols:  | unknown protein | chr5:15974543-15976013
           FORWARD
          Length = 276

 Score =  184 bits (467), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 121/178 (67%), Gaps = 12/178 (6%)

Query: 38  ITYIDIYECDSFTMCIFCFPTSSVIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEG 97
           +TY+ IY C  F++CIFC P S VIPLH+HP MTVFSK+L+G++H+K+YDWV        
Sbjct: 107 VTYLHIYACHRFSICIFCLPPSGVIPLHNHPEMTVFSKLLFGTMHIKSYDWVP------- 159

Query: 98  KESGNPP--VKLAKLAVDKVLTAPCGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYRED 155
            +S  P    +LAK+ VD   TAPC TSILYP  GGN+HCFTA T CAVLD++ P Y + 
Sbjct: 160 -DSPQPSSDTRLAKVKVDSDFTAPCDTSILYPADGGNMHCFTAKTACAVLDVIGPPYSDP 218

Query: 156 VGRKCSYYHDYPYSPFSSGNGSELGDGKEEDYAWLAEI-ETPDNLYMRPGIYTGPAVN 212
            GR C+YY DYP+S FS  +G  + + ++E YAWL E  E P++L +   +Y+GP + 
Sbjct: 219 AGRHCTYYFDYPFSSFSV-DGVVVAEEEKEGYAWLKEREEKPEDLTVTALMYSGPTIK 275


>AT5G15120.1 | Symbols:  | unknown protein | chr5:4898814-4900351
           FORWARD
          Length = 293

 Score =  178 bits (452), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 17/213 (7%)

Query: 2   VRPADVGLKEENPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCIFCFPTSSV 61
           ++P DVGL    P      G+         AR + PITY+ +++CD F++ IFC P S V
Sbjct: 93  MKPEDVGLTPTMPYFRPNSGV--------EARSSPPITYLHLHQCDQFSIGIFCLPPSGV 144

Query: 62  IPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNPPVKLAKLAVDKVLTAPCG 121
           IPLH+HPGMTVFSK+L+G++H+K+YDWV    + + K       +LAKL VD   TAPC 
Sbjct: 145 IPLHNHPGMTVFSKLLFGTMHIKSYDWVVDAPMRDSK------TRLAKLKVDSTFTAPCN 198

Query: 122 TSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNGSELGD 181
            SILYP+ GGN+H FTA+T CAVLD+L P Y    GR C+Y+ ++P    SS +   L  
Sbjct: 199 ASILYPEDGGNMHRFTAITACAVLDVLGPPYCNPEGRHCTYFLEFPLDKLSSEDDDVLSS 258

Query: 182 GKE-EDYAWLAEIET--PDNLYMRPGIYTGPAV 211
            +E E YAWL E +    D+  +   +Y GP V
Sbjct: 259 EEEKEGYAWLQERDDNPEDHTNVVGALYRGPKV 291


>AT2G42670.2 | Symbols:  | unknown protein | chr2:17772004-17773700
           REVERSE
          Length = 242

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 8/212 (3%)

Query: 2   VRPADVGLKEENPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCIFCFPTSSV 61
           ++P+DVG++++        G   LN  + + +    I Y+ ++ECDSF++ IFC P SS+
Sbjct: 37  IKPSDVGIEQDAQLARSRSG--PLNERNGSNQSPPAIKYLHLHECDSFSIGIFCMPPSSM 94

Query: 62  IPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNPPVKLAKLAVDKVLTAPCG 121
           IPLH+HPGMTV SK++YGS+HVK+YDW+EP   L   E  +   + AKL  D  +TA   
Sbjct: 95  IPLHNHPGMTVLSKLVYGSMHVKSYDWLEPQ--LTEPEDPSQEARPAKLVKDTEMTAQSP 152

Query: 122 TSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNGSELGD 181
            + LYPKSGGN+HCF A+T CA+LDIL P Y  +  R C+Y+     S      G    D
Sbjct: 153 VTTLYPKSGGNIHCFKAITHCAILDILAPPYSSEHDRHCTYFRK---SRREDLPGELEVD 209

Query: 182 GK-EEDYAWLAEIETPDNLYMRPGIYTGPAVN 212
           G+   D  WL E + PD+  +R   Y GP + 
Sbjct: 210 GEVVTDVTWLEEFQPPDDFVIRRIPYRGPVIR 241


>AT2G42670.1 | Symbols:  | unknown protein | chr2:17772004-17773700
           REVERSE
          Length = 241

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 9/212 (4%)

Query: 2   VRPADVGLKEENPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCIFCFPTSSV 61
           ++P+DVG++++        G   LN  + + +    I Y+ ++ECDSF++ IFC P SS+
Sbjct: 37  IKPSDVGIEQDAQLARSRSG--PLNERNGSNQSPPAIKYLHLHECDSFSIGIFCMPPSSM 94

Query: 62  IPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNPPVKLAKLAVDKVLTAPCG 121
           IPLH+HPGMTV SK++YGS+HVK+YDW+EP        S   P KL K   D  +TA   
Sbjct: 95  IPLHNHPGMTVLSKLVYGSMHVKSYDWLEPQLTEPEDPSQARPAKLVK---DTEMTAQSP 151

Query: 122 TSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFSSGNGSELGD 181
            + LYPKSGGN+HCF A+T CA+LDIL P Y  +  R C+Y+     S      G    D
Sbjct: 152 VTTLYPKSGGNIHCFKAITHCAILDILAPPYSSEHDRHCTYFRK---SRREDLPGELEVD 208

Query: 182 GK-EEDYAWLAEIETPDNLYMRPGIYTGPAVN 212
           G+   D  WL E + PD+  +R   Y GP + 
Sbjct: 209 GEVVTDVTWLEEFQPPDDFVIRRIPYRGPVIR 240


>AT3G58670.2 | Symbols:  | unknown protein | chr3:21703693-21705314
           REVERSE
          Length = 242

 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)

Query: 2   VRPADVGLKEE--------NPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCI 53
           ++P+DVGL++E         P ++R       N  S  A     I Y+ ++ECDSF++ I
Sbjct: 37  IKPSDVGLEQEAQLVRNWPGPGNERNG-----NHHSLPA-----IKYLQLHECDSFSIGI 86

Query: 54  FCFPTSSVIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNP-PVKLAKLAV 112
           FC P  S+IPLH+HPGMTV SK++YGS+HVK+YDW EP    +  E  +P   + AKL  
Sbjct: 87  FCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEP----DQSELDDPLQARPAKLVK 142

Query: 113 DKVLTAPCGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFS 172
           D  +T+P   + LYP +GGN+HCF A+T CA+ DIL+P Y    GR C+Y+   P     
Sbjct: 143 DIDMTSPSPATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSPMLDL- 201

Query: 173 SGNGSELGDGKEEDYAWLAEIETPDNLYMRPGIYTGPAV 211
            G    +      +  WL E + PDN  +    Y GP +
Sbjct: 202 PGEIEVMNGEVISNVTWLEEYQPPDNFVIWRVPYRGPVI 240


>AT3G58670.1 | Symbols:  | unknown protein | chr3:21703693-21705314
           REVERSE
          Length = 242

 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)

Query: 2   VRPADVGLKEE--------NPDDDRGHGIFGLNRLSRAARWAQPITYIDIYECDSFTMCI 53
           ++P+DVGL++E         P ++R       N  S  A     I Y+ ++ECDSF++ I
Sbjct: 37  IKPSDVGLEQEAQLVRNWPGPGNERNG-----NHHSLPA-----IKYLQLHECDSFSIGI 86

Query: 54  FCFPTSSVIPLHDHPGMTVFSKILYGSLHVKAYDWVEPTCILEGKESGNP-PVKLAKLAV 112
           FC P  S+IPLH+HPGMTV SK++YGS+HVK+YDW EP    +  E  +P   + AKL  
Sbjct: 87  FCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEP----DQSELDDPLQARPAKLVK 142

Query: 113 DKVLTAPCGTSILYPKSGGNLHCFTAVTPCAVLDILTPSYREDVGRKCSYYHDYPYSPFS 172
           D  +T+P   + LYP +GGN+HCF A+T CA+ DIL+P Y    GR C+Y+   P     
Sbjct: 143 DIDMTSPSPATTLYPTTGGNIHCFKAITHCAIFDILSPPYSSTHGRHCNYFRKSPMLDL- 201

Query: 173 SGNGSELGDGKEEDYAWLAEIETPDNLYMRPGIYTGPAV 211
            G    +      +  WL E + PDN  +    Y GP +
Sbjct: 202 PGEIEVMNGEVISNVTWLEEYQPPDNFVIWRVPYRGPVI 240