Jatropha Genome Database

JcCB0225841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0225841.10 + phase: 0 /partial
         (165 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27450.2 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE ...   308   1e-84
AT2G27450.1 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE ...   308   1e-84
AT5G64370.1 | Symbols: BETA-UP | BETA-UP (beta-ureidopropionase)...    55   3e-08

>AT2G27450.2 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE
           PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase,
           acting on carbon-nitrogen (but not peptide) bonds |
           chr2:11737666-11739577 REVERSE
          Length = 326

 Score =  308 bits (788), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/165 (89%), Positives = 152/165 (92%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQREDFF+RAKPYK HPTI RMQKLAKELGVVIPVSFFEEAN AHYNSIA
Sbjct: 76  ELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFFEEANTAHYNSIA 135

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IIDADGTDLG+YRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV         EAA
Sbjct: 136 IIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 195

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEPQD+GLDSRDHW+RVMQGHAGAN+V
Sbjct: 196 RAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWRRVMQGHAGANVV 240


>AT2G27450.1 | Symbols: NLP1, ATNLP1, CPA | NLP1 (NITRILASE-LIKE
           PROTEIN 1); N-carbamoylputrescine amidase/ hydrolase,
           acting on carbon-nitrogen (but not peptide) bonds |
           chr2:11737666-11739577 REVERSE
          Length = 299

 Score =  308 bits (788), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/165 (89%), Positives = 152/165 (92%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQREDFF+RAKPYK HPTI RMQKLAKELGVVIPVSFFEEAN AHYNSIA
Sbjct: 49  ELFEGYYFCQAQREDFFKRAKPYKNHPTIARMQKLAKELGVVIPVSFFEEANTAHYNSIA 108

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IIDADGTDLG+YRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV         EAA
Sbjct: 109 IIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 168

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEPQD+GLDSRDHW+RVMQGHAGAN+V
Sbjct: 169 RAMVLQGAEILFYPTAIGSEPQDQGLDSRDHWRRVMQGHAGANVV 213


>AT5G64370.1 | Symbols: BETA-UP | BETA-UP (beta-ureidopropionase);
           beta-ureidopropionase | chr5:25739264-25741031 FORWARD
          Length = 408

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 16/139 (11%)

Query: 6   YYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAH----YNSIAI 61
           + FC  +R  + + A+P  G  T   +Q+LAK+  +VI VS   E +  H    +N+  I
Sbjct: 143 FAFCTRERR-WCEFAEPVDGESTKF-LQELAKKYNMVI-VSPILERDIDHGEVLWNTAVI 199

Query: 62  IDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVEAA---------R 112
           I  +G  +G +RK+HIP    + E  Y+  GDTG  VF+T F KI V             
Sbjct: 200 IGNNGNIIGKHRKNHIPRVGDFNESTYYMEGDTGHPVFETVFGKIAVNICYGRHHPLNWL 259

Query: 113 AMVLQGAEILLYPTAIGSE 131
           A  L GAEI+  P+A   E
Sbjct: 260 AFGLNGAEIVFNPSATVGE 278