Jatropha Genome Database
- JcCB0224601.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0224601.10 + phase: 1 /pseudo
(181 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); tr... 197 4e-51
AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULAT... 164 2e-41
AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 159 1e-39
AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 159 1e-39
AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGUL... 149 1e-36
AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGUL... 143 7e-35
AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGUL... 138 2e-33
AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGUL... 130 7e-31
AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGU... 86 2e-17
AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONS... 82 1e-16
AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGUL... 75 3e-14
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 69 2e-12
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 67 7e-12
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 66 1e-11
AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGUL... 61 5e-10
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 60 6e-10
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 57 8e-09
AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9)... 55 2e-08
AT4G18020.5 | Symbols: | APRR2; transcription factor/ two-compo... 55 3e-08
AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 55 3e-08
AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 55 3e-08
AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 55 3e-08
AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 55 3e-08
AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); trans... 53 1e-07
AT2G27070.1 | Symbols: ARR13 | ARR13 (ARABIDOPSIS RESPONSE REGUL... 50 5e-07
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE ... 49 2e-06
AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6); trans... 48 4e-06
>AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 521
Score = 197 bits (500), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 128/186 (68%), Gaps = 29/186 (15%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TTCGLAR+AL LLRERKDGYDIVISDVNMPDMDGFKLLEHVGLE+DLPVIMMSVDGE S+
Sbjct: 38 TTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSR 97
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIE---------IVAGMESIQ 111
+MKG+QHGA DYLLKPIRM++L+ +WQ+V L +KL +VRDIE + +
Sbjct: 98 VMKGVQHGACDYLLKPIRMKELKIIWQHV-LRKKLQEVRDIEGCGYEGGADWITRYDEAH 156
Query: 112 MTRNGEDLSTSAKKRRDPGDISFIEK---------------ARVVWSADLHRKFVQAVCQ 156
GED+S K++ D F +K ARVVWS +LH KFV AV Q
Sbjct: 157 FLGGGEDVSFGKKRK----DFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQ 212
Query: 157 IGLDSK 162
IG D K
Sbjct: 213 IGCDHK 218
>AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR
2); transcription factor/ two-component response
regulator | chr4:9112979-9115785 FORWARD
Length = 664
Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats.
Identities = 90/185 (48%), Positives = 122/185 (65%), Gaps = 25/185 (13%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A AL+LLR+ K+G+DIVISDV+MPDMDGFKLLEHVGLEMDLPVIMMS D KS
Sbjct: 55 TKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSV 114
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLD-KVRD-----IEIVAG-MESIQMT 113
++KG+ HGA DYL+KP+R+E L+N+WQ+V+ ++ + V + IE G + Q
Sbjct: 115 VLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQH 174
Query: 114 RNGEDLST---------SAKKRR---------DPGDISFIEKARVVWSADLHRKFVQAVC 155
R D ++ S++KR+ D D S ++K RVVWS +LH++FV AV
Sbjct: 175 REDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 156 QIGLD 160
Q+G+D
Sbjct: 235 QLGVD 239
>AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5758853 FORWARD
Length = 669
Score = 159 bits (401), Expect = 1e-39, Method: Composition-based stats.
Identities = 87/197 (44%), Positives = 116/197 (58%), Gaps = 37/197 (18%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A AL+LLR+ K G+DIVISDV+MPDMDGFKLLEHVGLEMDLPVIMMS D KS
Sbjct: 64 TKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSV 123
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKL-----DKVRDIEIVAGMESIQ---- 111
++KG+ HGA DYL+KP+RME L+N+WQ+V+ + + IE + Q
Sbjct: 124 VLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGG 183
Query: 112 ------------------MTRNGEDLSTSAKKRRDP----------GDISFIEKARVVWS 143
G + +S++KR+D D S ++K RVVWS
Sbjct: 184 GGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWS 243
Query: 144 ADLHRKFVQAVCQIGLD 160
+LH++FV AV Q+G++
Sbjct: 244 VELHQQFVAAVNQLGVE 260
>AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5759139 FORWARD
Length = 690
Score = 159 bits (401), Expect = 1e-39, Method: Composition-based stats.
Identities = 87/197 (44%), Positives = 116/197 (58%), Gaps = 37/197 (18%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A AL+LLR+ K G+DIVISDV+MPDMDGFKLLEHVGLEMDLPVIMMS D KS
Sbjct: 64 TKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSV 123
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKL-----DKVRDIEIVAGMESIQ---- 111
++KG+ HGA DYL+KP+RME L+N+WQ+V+ + + IE + Q
Sbjct: 124 VLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGG 183
Query: 112 ------------------MTRNGEDLSTSAKKRRDP----------GDISFIEKARVVWS 143
G + +S++KR+D D S ++K RVVWS
Sbjct: 184 GGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWS 243
Query: 144 ADLHRKFVQAVCQIGLD 160
+LH++FV AV Q+G++
Sbjct: 244 VELHQQFVAAVNQLGVE 260
>AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component
response regulator | chr2:10724490-10726961 REVERSE
Length = 596
Score = 149 bits (375), Expect = 1e-36, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 113/178 (63%), Gaps = 21/178 (11%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A+ AL LLRE K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +
Sbjct: 44 TTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKY 103
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVR------DIEIVAGMESIQMTR 114
+MKG+ HGA DYLLKP+R+E+L+N+WQ+V+ + + DK R D +G E +
Sbjct: 104 VMKGVTHGACDYLLKPVRIEELKNIWQHVVRS-RFDKNRGSNNNGDKRDGSGNEGV--GN 160
Query: 115 NGEDLSTSAKKRRDPGDISFI------------EKARVVWSADLHRKFVQAVCQIGLD 160
+ ++ +KR+D + +K RVVW+ +LH+KFV AV Q+G +
Sbjct: 161 SDQNNGKGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYE 218
>AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component
response regulator | chr4:15444290-15446766 REVERSE
Length = 552
Score = 143 bits (360), Expect = 7e-35, Method: Composition-based stats.
Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 25/174 (14%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
TT A+ AL LLRE K+ +D+VISDV+MPDMDGFKLLE VGLEMDLPVIM+S +
Sbjct: 44 TTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKY 103
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLS 120
+MKG++HGA DYLLKP+R+E+L+N+WQ+V + ++ NG
Sbjct: 104 VMKGVKHGACDYLLKPVRIEELKNIWQHV-----------VRKSKLKKNKSNVSNGSGNC 152
Query: 121 TSAKKRR--------------DPGDISFIEKARVVWSADLHRKFVQAVCQIGLD 160
A ++R D D + +K RV+W+ +LH KF+ AV +G++
Sbjct: 153 DKANRKRKEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVE 206
>AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component
response regulator | chr2:333041-334514 FORWARD
Length = 382
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 116/189 (61%), Gaps = 32/189 (16%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGL-EMDLPVIMMSVDGEKS 59
T C A AL +LRERKD +D+V+SDV+MP M+G+ LL+ VGL EMDLPVIMMSVDG +
Sbjct: 38 TICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTT 97
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYV-----LLTEKLDKVRDIE----------IV 104
+M GI HGA DYL+KPIR E+L+N+WQ+V ++ ++L + +E +V
Sbjct: 98 TVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVV 157
Query: 105 AGM-----ESIQMTRNGEDLSTSA--------KKRRDPGDISFIEKARVVWSADLHRKFV 151
+ ES+ RN + + DPG+ +K+RVVWS +LH++FV
Sbjct: 158 VSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGN---SKKSRVVWSIELHQQFV 214
Query: 152 QAVCQIGLD 160
AV ++G+D
Sbjct: 215 NAVNKLGID 223
>AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component
response regulator | chr5:23501785-23504099 REVERSE
Length = 618
Score = 130 bits (326), Expect = 7e-31, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 103/179 (57%), Gaps = 35/179 (19%)
Query: 6 ARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
+R AL +LRE + +D+VISDV MPD DGFKLLE +GLEMDLPVIM+S + +MKGI
Sbjct: 33 SRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGI 91
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDIEIVAGMESIQMTRNGEDLSTSAKK 125
HGA DYL+KP+ +++L+N+W +V+ + + + + ++++K
Sbjct: 92 IHGACDYLVKPVGLKELQNIWHHVVKKN----------IKSYAKLLPPSESDSVPSASRK 141
Query: 126 RRDP-----------------------GDISFI-EKARVVWSADLHRKFVQAVCQIGLD 160
R+D GD S +K RVVWS +LH+KFV AV Q+GLD
Sbjct: 142 RKDKVNDSGDEDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLD 200
>AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE
REGULATOR 4); transcription factor/ two-component
response regulator | chr5:19962934-19964351 FORWARD
Length = 292
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 22/180 (12%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSK 60
T C A++ LR ++ +D+ + VN + D F+ L +G EMDLP+I++S D
Sbjct: 69 TICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKS 128
Query: 61 LMKGIQHGASDYLLKPIRMEQLRNLWQYVLLTEKLDKVRDI-----EIVAGMESIQM--- 112
+ K + +GA+DYL+KPIR E LR ++++ L +K+ + R + E AG +S +
Sbjct: 129 VKKWMINGAADYLIKPIRPEDLRIVFKH--LVKKMRERRSVVTGEAEKAAGEKSSSVGDS 186
Query: 113 -TRNGEDLSTSA--------KKRRDPGD---ISFIEKARVVWSADLHRKFVQAVCQIGLD 160
RN S+ + R D D S +K RVVW +LH+ F+ AV +GL+
Sbjct: 187 TIRNPNKSKRSSCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLE 246
>AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE
REGULATOR 20); transcription factor/ two-component
response regulator | chr3:23176556-23178294 REVERSE
Length = 426
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
Query: 6 ARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
+A+ L + K D+VI D +MPD++G L +G +MDLPV++MS + +K +M+ I
Sbjct: 71 GEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESI 130
Query: 66 QHGASDYLLKPIRMEQLRNLWQYV----LLTEKLDKVRDIEIVAG-------MESIQMTR 114
++GA D+L+KP+ E + LW++V + LDK + V +E +
Sbjct: 131 KYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGESGTVESDPDEYDDLEQDNLYE 190
Query: 115 NGEDLSTSAKKRRDPGDISFIEKARVVWSADLHRKFVQAVCQIG 158
+ E+ S + ++ + S +K R+ W+ +LH KF AV ++G
Sbjct: 191 SNEEGSKNTCDHKE--EKSPTKKPRMQWTPELHHKFEVAVEKMG 232
>AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE
REGULATOR 19); transcription factor/ two-component
response regulator | chr1:18191342-18193598 FORWARD
Length = 608
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 55/85 (64%)
Query: 6 ARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGEKSKLMKGI 65
A AL L K +IVI D +MP +DG + L+ + ++DLPV++MS D + +MK
Sbjct: 66 AEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKAT 125
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVL 90
+GA DY++KP++ E + N+WQ+++
Sbjct: 126 FYGACDYVVKPVKEEVMANIWQHIV 150
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 7/90 (7%)
Query: 4 GLARDALNLLRERKDGYDIVISDVNMPDMDGFKLL----EHVGLEMDLPVIMMSVDGEKS 59
GLA A +L+E+ D++++++++P + GF LL EH + ++PVIMMS
Sbjct: 69 GLA--AWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACK-NIPVIMMSSQDSIK 125
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYV 89
++K + GA+DYL+KP+R +L+NLWQ+V
Sbjct: 126 MVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGFKLL----EHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L+ + + D+++++V++P + G+ LL EH + ++PVIMMS + + K
Sbjct: 194 AWEMLKGKPESVDLILTEVDLPSISGYALLTLIMEH-DICKNIPVIMMSTQDSVNTVYKC 252
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA+DYL+KP+R +LRNLWQ+V
Sbjct: 253 MLKGAADYLVKPLRRNELRNLWQHV 277
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 6 ARDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGEKSKLM 62
AR ++ L DI+++++++P G K+L ++ + DL PVIMMS E ++
Sbjct: 51 ARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVV 110
Query: 63 KGIQHGASDYLLKPIRMEQLRNLWQYVL-------LTEKLDKVRDIEIVAGMESIQMTRN 115
K ++ GA+DYL+KP+R +L NLW ++ L EK D ++V +S T +
Sbjct: 111 KCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNS 170
Query: 116 ----GEDLSTSAKKRRDP--GDISFIEKARVVWSADLHRK 149
+D + + +P G++S E V +A +H +
Sbjct: 171 TNLFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHAR 210
>AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE
REGULATOR 21); transcription factor/ two-component
response regulator | chr5:2252237-2256018 FORWARD
Length = 621
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 47/199 (23%)
Query: 7 RDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGEKSKLMKGI 65
+ AL+ L+ ++D D++I+D MP M+G +L + + E +LPV++MS D K + + +
Sbjct: 57 KKALSTLKIQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKEE--ESL 114
Query: 66 QHGASDYLLKPIRMEQLRNLWQY----------VLLTEKLDKVRDIEI------VAGMES 109
GA ++ KPI L ++Q+ L TE+ K D+ + V
Sbjct: 115 SCGAMGFIPKPIHPTDLTKIYQFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQAD 174
Query: 110 IQMTR----------------NGEDLSTSA----KKRRDPGDISF--------IEKARVV 141
+ T+ NG +ST +KR+ G S +K ++
Sbjct: 175 VLKTKRKNCSFKSDSRTVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQ 234
Query: 142 WSADLHRKFVQAVCQIGLD 160
W+ LH F+QA+ IGLD
Sbjct: 235 WTDSLHDLFLQAIRHIGLD 253
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 8 DALNLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGEKSKLMK 63
+A +L + K D+V+++V+MP G K++ H L+ ++PVIMMS + K
Sbjct: 98 EAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFK 156
Query: 64 GIQHGASDYLLKPIRMEQLRNLWQYV 89
+ +GA D+L+KPIR +L+NLWQ+V
Sbjct: 157 CLSNGAVDFLVKPIRKNELKNLWQHV 182
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 9 ALNLLRERKDGYDIVISDVNMPDMDGF----KLLEHVGLEMDLPVIMMSVDGEKSKLMKG 64
A +L + + DIV+++V MP + G K+L H ++PVIMMS + K
Sbjct: 113 AWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKC 171
Query: 65 IQHGASDYLLKPIRMEQLRNLWQYV 89
+ GA D+L+KPIR +L+ LWQ+V
Sbjct: 172 LSKGAVDFLVKPIRKNELKILWQHV 196
>AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9);
transcription regulator/ two-component response
regulator | chr3:21110059-21111228 FORWARD
Length = 234
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++I+D MP M G+ LL+ V D+PV++MS + +++ + ++ GA ++ LKP+
Sbjct: 75 NLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPV 134
Query: 78 RMEQLRNLWQYVLLTE-KLDKVRDIEIVAGMES 109
R+ L L +++ T+ K K+ +IE + +E+
Sbjct: 135 RLADLNKLKPHMMKTKLKNQKLEEIETTSKVEN 167
>AT4G18020.5 | Symbols: | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNM-PDMDGFKLLEHVGLEMDLPVIMMSVDGEKS 59
TT +AL+ + + + + I I +VNM + + FK LE + LP IM+S D +
Sbjct: 51 TTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCIT 108
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVL 90
MK I GA ++L KP+ E+L+N+WQ+V+
Sbjct: 109 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNM-PDMDGFKLLEHVGLEMDLPVIMMSVDGEKS 59
TT +AL+ + + + + I I +VNM + + FK LE + LP IM+S D +
Sbjct: 51 TTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCIT 108
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVL 90
MK I GA ++L KP+ E+L+N+WQ+V+
Sbjct: 109 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNM-PDMDGFKLLEHVGLEMDLPVIMMSVDGEKS 59
TT +AL+ + + + + I I +VNM + + FK LE + LP IM+S D +
Sbjct: 51 TTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCIT 108
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVL 90
MK I GA ++L KP+ E+L+N+WQ+V+
Sbjct: 109 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNM-PDMDGFKLLEHVGLEMDLPVIMMSVDGEKS 59
TT +AL+ + + + + I I +VNM + + FK LE + LP IM+S D +
Sbjct: 51 TTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCIT 108
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVL 90
MK I GA ++L KP+ E+L+N+WQ+V+
Sbjct: 109 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 TTCGLARDALNLLRERKDGYDIVISDVNM-PDMDGFKLLEHVGLEMDLPVIMMSVDGEKS 59
TT +AL+ + + + + I I +VNM + + FK LE + LP IM+S D +
Sbjct: 51 TTFTDETEALSAVVKNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCIT 108
Query: 60 KLMKGIQHGASDYLLKPIRMEQLRNLWQYVL 90
MK I GA ++L KP+ E+L+N+WQ+V+
Sbjct: 109 TTMKCIALGAVEFLQKPLSPEKLKNIWQHVV 139
>AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr1:22065894-22066895 REVERSE
Length = 231
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 11/88 (12%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
D++I+D MP M G++LL+ + ++PV++MS + +++ + ++ GA D+LLKP+
Sbjct: 89 DLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPV 148
Query: 78 RMEQLRNLWQYVLLTEKLDKVRDIEIVA 105
++ ++ L Y+ RD+++ A
Sbjct: 149 KLADVKRLRSYL--------TRDVKVAA 168
>AT2G27070.1 | Symbols: ARR13 | ARR13 (ARABIDOPSIS RESPONSE
REGULATOR 13); transcription factor/ two-component
response regulator | chr2:11555781-11560215 REVERSE
Length = 575
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 7 RDALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGEKSKLMKGI 65
+ AL+ L+ ++D D++I+D MP M+G +L + + E +L V++MS D K + + +
Sbjct: 52 KKALSTLKNQRDNIDLIITDYYMPGMNGLQLKKQITQEFGNLSVLVMSSDPNKEE--ESL 109
Query: 66 QHGASDYLLKPIRMEQLRNLWQYVLLTEK 94
GA ++ KPI L ++Q+ L ++
Sbjct: 110 SCGAMGFIPKPIAPTDLPKIYQFALTYKR 138
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/
two-component response regulator | chr1:3442624-3443759
REVERSE
Length = 259
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
D++I+D MP M G++LL+ + ++PV++MS + +++ + ++ GA D+LLKP+
Sbjct: 90 DLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPV 149
Query: 78 RMEQLRNLWQYVLLTEKL 95
++ ++ L ++ KL
Sbjct: 150 KLADVKRLRSHLTKDVKL 167
>AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6);
transcription regulator/ two-component response
regulator | chr5:25252745-25254158 REVERSE
Length = 186
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 21 DIVISDVNMPDMDGFKLLEHVGLEM---DLPVIMMSVDGEKSKLMKGIQHGASDYLLKPI 77
+++++D +MP M G++LL+ + ++PV++MS + ++ + ++ GA D+LLKP+
Sbjct: 81 NLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPV 140
Query: 78 RMEQLRNLWQYVLLTEKLDKVRDIE 102
++ ++ L ++ E L + I+
Sbjct: 141 KLSDVKRLRDSLMKVEDLSFTKSIQ 165