Jatropha Genome Database

JcCB0222931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0222931.10 + phase: 0 /TE/partial
         (785 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   238   1e-62
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...    90   7e-18

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  238 bits (607), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/401 (36%), Positives = 221/401 (55%), Gaps = 34/401 (8%)

Query: 367 SVCLFISLAATFDWTLHQLDVKNAFLHGDLQEEVYIEQPPGFIAQE----ELGKVCELRK 422
           SV L ++++A +++TLHQLD+ NAFL+GDL EE+Y++ PPG+ A++        VC L+K
Sbjct: 175 SVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKK 234

Query: 423 SLYGLKQSPRAWFGRFCNVVHQFGMXKSTSDHSVFFRSTKTSXXXXXXXXXXXXXTGSDS 482
           S+YGLKQ+ R WF +F   +  FG  +S SDH+ F + T T                ++ 
Sbjct: 235 SIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNND 294

Query: 483 AGIASLKSFLQTQFQTKDLGLLKYFLGIEVSWCKRGIFLSQRKYVLELLKXTGKLGAKPC 542
           A +  LKS L++ F+ +DLG LKYFLG+E++    GI + QRKY L+LL  TG LG KP 
Sbjct: 295 AAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPS 354

Query: 543 SAPMTPNLQLSI-GGKLFDDLEMYKRLVGKLNYLTVTSPDIAYSVSVLSQFMSSPTVIHW 601
           S PM P++  S   G  F D + Y+RL+G+L YL +T  DI+++V+ LSQF  +P + H 
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414

Query: 602 EAXDKFCARXKVIQVVASFTVIMGIWTLSVFRMRI-----------GQVRRLIED---XL 647
           +      A  K++  +   TV  G++  S   M++              RR        L
Sbjct: 415 Q------AVMKILHYIKG-TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 648 QDIVSLWVETXYRGGARNKIXSHDRVLNXNIEMAQSACEIIWIRQLLEEIGFKSSLPAKL 707
              +  W     +  +++   +  R L+   +      E++W+ Q   E+    S P  L
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATD------EMMWLAQFFRELQLPLSKPTLL 521

Query: 708 WCDNQVALHIASNPVFHKRTKHIEIDFHFIRER--YNKVLS 746
           +CDN  A+HIA+N VFH+RTKHIE D H +RER  Y   LS
Sbjct: 522 FCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLS 562


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score = 89.7 bits (221), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 72/125 (57%)

Query: 478 TGSDSAGIASLKSFLQTQFQTKDLGLLKYFLGIEVSWCKRGIFLSQRKYVLELLKXTGKL 537
           TGS +  +  L   L + F  KDLG + YFLGI++     G+FLSQ KY  ++L   G L
Sbjct: 13  TGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGML 72

Query: 538 GAKPCSAPMTPNLQLSIGGKLFDDLEMYKRLVGKLNYLTVTSPDIAYSVSVLSQFMSSPT 597
             KP S P+   L  S+    + D   ++ +VG L YLT+T PDI+Y+V+++ Q M  PT
Sbjct: 73  DCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPT 132

Query: 598 VIHWE 602
           +  ++
Sbjct: 133 LADFD 137