Jatropha Genome Database

JcCB0219281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0219281.10 + phase: 0 /partial
         (147 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47810.3 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein...   267   2e-72
AT3G47810.1 | Symbols: MAG1, VPS29, ATVPS29 | MAG1 (MAIGO 1); hy...   267   2e-72
AT3G47810.2 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein...   267   2e-72

>AT3G47810.3 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein
           serine/threonine phosphatase | chr3:17637256-17639017
           REVERSE
          Length = 190

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/142 (89%), Positives = 132/142 (92%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKT+CPDLHI RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQL VDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVY
Sbjct: 105 RQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTT 142
           VYELIDGEVKVDKI+FKK  TT
Sbjct: 165 VYELIDGEVKVDKIEFKKPPTT 186


>AT3G47810.1 | Symbols: MAG1, VPS29, ATVPS29 | MAG1 (MAIGO 1);
           hydrolase/ protein serine/threonine phosphatase |
           chr3:17637256-17639017 REVERSE
          Length = 190

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/142 (89%), Positives = 132/142 (92%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKT+CPDLHI RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQL VDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVY
Sbjct: 105 RQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTT 142
           VYELIDGEVKVDKI+FKK  TT
Sbjct: 165 VYELIDGEVKVDKIEFKKPPTT 186


>AT3G47810.2 | Symbols: MAG1 | MAG1 (MAIGO 1); hydrolase/ protein
           serine/threonine phosphatase | chr3:17637256-17639017
           REVERSE
          Length = 190

 Score =  267 bits (683), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/142 (89%), Positives = 132/142 (92%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKT+CPDLHI RGE+DE+ RYPE KTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTICPDLHIVRGEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQL VDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSI  DVNPSFVLMDIDG R VVY
Sbjct: 105 RQLGVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSINQDVNPSFVLMDIDGFRAVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTT 142
           VYELIDGEVKVDKI+FKK  TT
Sbjct: 165 VYELIDGEVKVDKIEFKKPPTT 186