Jatropha Genome Database
- JcCB0217501.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0217501.10 + phase: 1 /pseudo/partial
(345 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34890.1 | Symbols: ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENA... 443 e-125
AT4G34900.1 | Symbols: ATXDH2, XDH2 | XDH2 (XXANTHINE DEHYDROGEN... 428 e-120
AT3G43600.1 | Symbols: AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyd... 120 1e-27
AT4G37500.1 | Symbols: | xanthine dehydrogenase family protein ... 119 2e-27
AT5G20960.2 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSI... 108 5e-24
AT5G20960.1 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSI... 108 5e-24
AT2G27150.2 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3)... 105 4e-23
AT2G27150.1 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3)... 105 4e-23
AT1G04580.1 | Symbols: AAO4, ATAO-4, ATAO2 | AAO4 (ARABIDOPSIS A... 101 6e-22
AT3G04390.1 | Symbols: | xanthine dehydrogenase family protein ... 84 2e-16
>AT4G34890.1 | Symbols: ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENASE
1); xanthine dehydrogenase | chr4:16618736-16624983
REVERSE
Length = 1361
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/271 (77%), Positives = 234/271 (86%), Gaps = 2/271 (0%)
Query: 42 QETNFQGDGSITHYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALV 101
+E NFQ +GS+THY Q LQ+CTL QLW ELK+SCN +KAR + ++N HNRWKKRGVA+V
Sbjct: 971 KEMNFQVEGSVTHYCQTLQHCTLHQLWKELKVSCNFLKARREADEFNSHNRWKKRGVAMV 1030
Query: 102 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPLSSV 161
PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQ+AAS FNIPLSSV
Sbjct: 1031 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSV 1090
Query: 162 FISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFSSFAELASACY 221
F+SETSTDKVPN DMYGAAVLDACEQI ARMEPVASKHNF++F EL SACY
Sbjct: 1091 FVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHNFNTFTELVSACY 1150
Query: 222 IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
QRIDLSAHGF+I P++GFDW +GKGN FRYYTYGAAFAEVEIDTLTGDFHTRAAD++LD
Sbjct: 1151 FQRIDLSAHGFHIVPDLGFDWISGKGNAFRYYTYGAAFAEVEIDTLTGDFHTRAADIMLD 1210
Query: 282 LGYSLNPAIDVGQV--PFFLGLPFXAMHDLE 310
LGYSLNPAIDVGQ+ F GL + A+ +L+
Sbjct: 1211 LGYSLNPAIDVGQIEGAFVQGLGWVALEELK 1241
>AT4G34900.1 | Symbols: ATXDH2, XDH2 | XDH2 (XXANTHINE DEHYDROGENASE
2); FAD binding / catalytic/ electron carrier/ iron ion
binding / iron-sulfur cluster binding / metal ion binding
/ oxidoreductase/ xanthine dehydrogenase |
chr4:16625688-16631306 REVERSE
Length = 1353
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/271 (74%), Positives = 230/271 (84%), Gaps = 2/271 (0%)
Query: 42 QETNFQGDGSITHYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALV 101
+E NFQ +GSITHY Q LQ+CTL QLW ELK+S N +K R + ++N HNRWKKRGVA+V
Sbjct: 963 KEMNFQVEGSITHYFQSLQHCTLHQLWKELKVSSNFLKTRREADEFNSHNRWKKRGVAMV 1022
Query: 102 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPLSSV 161
PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQ+AA+ FNI LSSV
Sbjct: 1023 PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAATAFNILLSSV 1082
Query: 162 FISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFSSFAELASACY 221
F+SETSTDKVPN DMYGAAVLDACEQI ARMEPVASKHNF++F+ELASACY
Sbjct: 1083 FVSETSTDKVPNASPTAASASSDMYGAAVLDACEQIIARMEPVASKHNFNTFSELASACY 1142
Query: 222 IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
QRIDLSAHGF+I PE+ FDW +GKGN +RYYTYGAAFAEVEIDTLTGDFHTR AD++LD
Sbjct: 1143 FQRIDLSAHGFHIVPELEFDWVSGKGNAYRYYTYGAAFAEVEIDTLTGDFHTRKADIMLD 1202
Query: 282 LGYSLNPAIDVGQV--PFFLGLPFXAMHDLE 310
LGYSLNP ID+GQ+ F GL + A+ +L+
Sbjct: 1203 LGYSLNPTIDIGQIEGAFVQGLGWVALEELK 1233
>AT3G43600.1 | Symbols: AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyde
oxidase | chr3:15512778-15517375 REVERSE
Length = 1321
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 31/269 (11%)
Query: 46 FQGDGSITHYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKF 105
F DG+ G+ +Y TL+ +W+++ +S + +++N N W+KRG++ VP +
Sbjct: 945 FYKDGA----GEPHEY-TLSSMWDKVGVSSKFEERVSVVREFNESNMWRKRGISRVPIIY 999
Query: 106 GISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP-------- 157
+ + V V +DGT++V GG+E+GQGL TKV Q+ + +
Sbjct: 1000 EV-----LLFATPGRVSVLSDGTIVVEIGGIELGQGLWTKVKQMTSYALGMLQCDGTEEL 1054
Query: 158 LSSVFISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFS-SFAEL 216
L + + ++ + + + AAV CE + R++P+ + + ++ EL
Sbjct: 1055 LEKIRVIQSDSLSMVQGNFTGGSTTSEGSCAAVRLCCETLVERLKPLMERSDGPITWNEL 1114
Query: 217 ASACYIQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAA 276
S Y Q ++LSA Y T K P +Y YG A +EVE+D +TG
Sbjct: 1115 ISQAYAQSVNLSASDLY----------TPKDTPMQYLNYGTAVSEVEVDLVTGQTTVLQT 1164
Query: 277 DVILDLGYSLNPAIDVGQV--PFFLGLPF 303
D++ D G SLNPA+D+GQ+ F GL F
Sbjct: 1165 DILYDCGKSLNPAVDLGQIEGSFVQGLGF 1193
>AT4G37500.1 | Symbols: | xanthine dehydrogenase family protein |
chr4:17625388-17625915 FORWARD
Length = 124
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 71/101 (70%), Gaps = 7/101 (6%)
Query: 113 FMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPLSSVFISETSTDKVP 172
+ QAGALVHV T+GTVLVTHGGVEMGQG K I PLSSVF+SETST KVP
Sbjct: 30 LLLQAGALVHVCTNGTVLVTHGGVEMGQGFAYKGCVI-------PLSSVFVSETSTYKVP 82
Query: 173 NXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFSSF 213
N DMYGAAVLDA EQI A++EPVASKHNF+S
Sbjct: 83 NASPTAASASSDMYGAAVLDAVEQIIAKLEPVASKHNFNSI 123
>AT5G20960.2 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSIS
ALDEHYDE OXIDASE 1); aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr5:7116783-7122338
FORWARD
Length = 1368
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 63 TLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMNQAGALVH 122
TL LW+ + K R+ +++N N+W+KRG++ VP + ++ M V
Sbjct: 1000 TLPLLWDRIDEFSGFNKRRKVVEEFNASNKWRKRGISRVPAVYAVN-----MRSTPGRVS 1054
Query: 123 VYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP---------LSSVFISETSTDKVPN 173
V DG+++V G+E+GQGL TKV Q+AA + L + + ++ T +
Sbjct: 1055 VLGDGSIVVEVQGIEIGQGLWTKVKQMAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQ 1114
Query: 174 XXXXXXXXXXDMYGAAVLDACEQIKARMEPVASK-----HNFSSFAELASACYIQRIDLS 228
+ AV C+ + R+ PV + ++ L S Y Q I++S
Sbjct: 1115 GSMTAGSTTSEASSEAVRICCDGLVERLLPVKTALVEQTGGPVTWDSLISQAYQQSINMS 1174
Query: 229 AHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLGYSLNP 288
Y+ P+ STG+ Y YG A +EVE++ LTG+ D+I D G SLNP
Sbjct: 1175 VSSKYM-PD-----STGE-----YLNYGIAASEVEVNVLTGETTILRTDIIYDCGKSLNP 1223
Query: 289 AIDVGQV--PFFLGLPF 303
A+D+GQ+ F GL F
Sbjct: 1224 AVDLGQIEGAFVQGLGF 1240
>AT5G20960.1 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSIS
ALDEHYDE OXIDASE 1); aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr5:7116783-7122338
FORWARD
Length = 1368
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 63 TLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMNQAGALVH 122
TL LW+ + K R+ +++N N+W+KRG++ VP + ++ M V
Sbjct: 1000 TLPLLWDRIDEFSGFNKRRKVVEEFNASNKWRKRGISRVPAVYAVN-----MRSTPGRVS 1054
Query: 123 VYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP---------LSSVFISETSTDKVPN 173
V DG+++V G+E+GQGL TKV Q+AA + L + + ++ T +
Sbjct: 1055 VLGDGSIVVEVQGIEIGQGLWTKVKQMAAYSLGLIQCGTTSDELLKKIRVIQSDTLSMVQ 1114
Query: 174 XXXXXXXXXXDMYGAAVLDACEQIKARMEPVASK-----HNFSSFAELASACYIQRIDLS 228
+ AV C+ + R+ PV + ++ L S Y Q I++S
Sbjct: 1115 GSMTAGSTTSEASSEAVRICCDGLVERLLPVKTALVEQTGGPVTWDSLISQAYQQSINMS 1174
Query: 229 AHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLGYSLNP 288
Y+ P+ STG+ Y YG A +EVE++ LTG+ D+I D G SLNP
Sbjct: 1175 VSSKYM-PD-----STGE-----YLNYGIAASEVEVNVLTGETTILRTDIIYDCGKSLNP 1223
Query: 289 AIDVGQV--PFFLGLPF 303
A+D+GQ+ F GL F
Sbjct: 1224 AVDLGQIEGAFVQGLGF 1240
>AT2G27150.2 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3);
abscisic aldehyde oxidase/ aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr2:11601952-11607014
FORWARD
Length = 1332
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 63 TLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMNQAGALVH 122
TL LW +L++S + E K++NL N W+KRG++ VP + V
Sbjct: 968 TLPLLWEKLEISSKFKERSEMVKEFNLCNVWRKRGISRVPIVHQV-----MQRPTPGKVS 1022
Query: 123 VYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP--------LSSVFISETSTDKVPNX 174
+ +DG+V+V GG+E+GQGL TKV Q+ A + L + + ++ T +
Sbjct: 1023 ILSDGSVVVEVGGIEIGQGLWTKVQQMVAYGLGMVKCEGNEKLLDRIRVVQSDTLGMIQG 1082
Query: 175 XXXXXXXXXDMYGAAVLDACEQIKARMEPVA-----SKHNFSSFAELASACYIQRIDLSA 229
+ AV C + R++P+ K ++ L Y Q I+LSA
Sbjct: 1083 GFTAGSTTSESSCEAVRLCCVILVERLKPIMDQMMMEKSGSVTWNILIQQAYGQYINLSA 1142
Query: 230 HGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLGYSLNPA 289
Y PE + Y YG +EVE+D +TG +D+I D G SLNPA
Sbjct: 1143 STLY-KPEY---------SSMEYLNYGVGVSEVEVDLVTGKTEILRSDIIYDCGKSLNPA 1192
Query: 290 IDVGQV--PFFLGLPFXAMHD 308
+D+GQ F G+ F M +
Sbjct: 1193 VDLGQTEGAFVQGIGFFMMEE 1213
>AT2G27150.1 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3);
abscisic aldehyde oxidase/ aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr2:11601952-11607014
FORWARD
Length = 1332
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 63 TLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMNQAGALVH 122
TL LW +L++S + E K++NL N W+KRG++ VP + V
Sbjct: 968 TLPLLWEKLEISSKFKERSEMVKEFNLCNVWRKRGISRVPIVHQV-----MQRPTPGKVS 1022
Query: 123 VYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP--------LSSVFISETSTDKVPNX 174
+ +DG+V+V GG+E+GQGL TKV Q+ A + L + + ++ T +
Sbjct: 1023 ILSDGSVVVEVGGIEIGQGLWTKVQQMVAYGLGMVKCEGNEKLLDRIRVVQSDTLGMIQG 1082
Query: 175 XXXXXXXXXDMYGAAVLDACEQIKARMEPVA-----SKHNFSSFAELASACYIQRIDLSA 229
+ AV C + R++P+ K ++ L Y Q I+LSA
Sbjct: 1083 GFTAGSTTSESSCEAVRLCCVILVERLKPIMDQMMMEKSGSVTWNILIQQAYGQYINLSA 1142
Query: 230 HGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLGYSLNPA 289
Y PE + Y YG +EVE+D +TG +D+I D G SLNPA
Sbjct: 1143 STLY-KPEY---------SSMEYLNYGVGVSEVEVDLVTGKTEILRSDIIYDCGKSLNPA 1192
Query: 290 IDVGQV--PFFLGLPFXAMHD 308
+D+GQ F G+ F M +
Sbjct: 1193 VDLGQTEGAFVQGIGFFMMEE 1213
>AT1G04580.1 | Symbols: AAO4, ATAO-4, ATAO2 | AAO4 (ARABIDOPSIS
ALDEHYDE OXIDASE 4); aldehyde oxidase/ aryl-aldehyde
oxidase | chr1:1252212-1257510 REVERSE
Length = 1337
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 30/262 (11%)
Query: 56 GQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMN 115
G+ +Y TL LW++L++S + + E K++N N W+KRG++ VP +
Sbjct: 964 GEPDEY-TLPLLWDKLEVSADFRRRAESVKEFNRCNIWRKRGISRVPIIHLV-----IHR 1017
Query: 116 QAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIP--------LSSVFISETS 167
V + DG+V V G+E+GQGL TKV Q+ A + L + + +T
Sbjct: 1018 PTPGKVSILNDGSVAVEVAGIEVGQGLWTKVQQMVAYGLGMIKCEGSDDLLERIRLLQTD 1077
Query: 168 TDKVPNXXXXXXXXXXDMYGAAVLDAC----EQIKARMEPVASKHNFSSFAELASACYIQ 223
T + + AV C E+++ M + ++ L Q
Sbjct: 1078 TLSMSQSSYTAGSTTSENCCEAVRLCCGILVERLRPTMNQILENARSVTWDMLIQQANAQ 1137
Query: 224 RIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLG 283
+DLSA FY PE + Y YG +EVE+D +TG +D+I D G
Sbjct: 1138 SVDLSARTFY-KPE---------SSSAEYLNYGVGASEVEVDLVTGRTEIIRSDIIYDCG 1187
Query: 284 YSLNPAIDVGQV--PFFLGLPF 303
SLNPA+D+GQ+ F G+ F
Sbjct: 1188 KSLNPAVDLGQIEGAFVQGIGF 1209
>AT3G04390.1 | Symbols: | xanthine dehydrogenase family protein |
chr3:1165375-1165765 REVERSE
Length = 79
Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 142 LHTKVAQIAASVFNIPLSSVFISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARM 201
+HTKVA A+ FNIPLSSVF+SETST KVPN DMYG AVLD + I A++
Sbjct: 10 MHTKVA---AAAFNIPLSSVFVSETSTYKVPNASPTAASASSDMYGPAVLDDVKHIIAKL 66
Query: 202 EPVASKHNFSS 212
EPV SKHNF++
Sbjct: 67 EPVTSKHNFNT 77