Jatropha Genome Database

JcCB0212851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212851.10 - phase: 1 /pseudo
         (237 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ fam...   353   6e-98
AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ fam...   352   9e-98

>AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742689 REVERSE
          Length = 468

 Score =  353 bits (905), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 175/218 (80%), Positives = 195/218 (89%)

Query: 1   GVTAAKGFKAAGIYGGLRAQGNKPDLALVTCDVDAAAAGAFTTNMVAAAPVLYCKNALDI 60
           GVTAAKGFKAAG+Y GLRA G KPDLALVTCDV+A AAG FTTN+VAAAPV+YCK  L+ 
Sbjct: 65  GVTAAKGFKAAGMYAGLRAAGKKPDLALVTCDVEAVAAGVFTTNVVAAAPVVYCKKVLET 124

Query: 61  SKTARAVLINAGQANAATGDAGYQDVLECADALAKVLNLKQEEVLIESTGVIGHRIKKEA 120
           SKTARAVLINAGQANAATGDAGYQD+L+C  ++A +L +K EEVLIESTGVIG RIKKE 
Sbjct: 125 SKTARAVLINAGQANAATGDAGYQDMLDCVGSIATLLKVKPEEVLIESTGVIGQRIKKEE 184

Query: 121 LLNALPELVNSLTSSLEGAGSAAVAITTTDLVSKSVAIESQVGDMSVRVGGMAKGSGMIH 180
           LL+ALP LVNS + S+E A SAAVAITTTDLVSKSVA+ESQVG + +RVGGMAKGSGMIH
Sbjct: 185 LLHALPTLVNSRSDSVEEADSAAVAITTTDLVSKSVAVESQVGGIKIRVGGMAKGSGMIH 244

Query: 181 PNMATMLGVITTDALVEADVWRKMVLIAVNRSFNQITV 218
           PNMATMLGVITTDALVE+D+WRKMV +AVNRSFNQITV
Sbjct: 245 PNMATMLGVITTDALVESDIWRKMVKVAVNRSFNQITV 282


>AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742430 REVERSE
          Length = 409

 Score =  352 bits (904), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 175/218 (80%), Positives = 195/218 (89%)

Query: 1   GVTAAKGFKAAGIYGGLRAQGNKPDLALVTCDVDAAAAGAFTTNMVAAAPVLYCKNALDI 60
           GVTAAKGFKAAG+Y GLRA G KPDLALVTCDV+A AAG FTTN+VAAAPV+YCK  L+ 
Sbjct: 6   GVTAAKGFKAAGMYAGLRAAGKKPDLALVTCDVEAVAAGVFTTNVVAAAPVVYCKKVLET 65

Query: 61  SKTARAVLINAGQANAATGDAGYQDVLECADALAKVLNLKQEEVLIESTGVIGHRIKKEA 120
           SKTARAVLINAGQANAATGDAGYQD+L+C  ++A +L +K EEVLIESTGVIG RIKKE 
Sbjct: 66  SKTARAVLINAGQANAATGDAGYQDMLDCVGSIATLLKVKPEEVLIESTGVIGQRIKKEE 125

Query: 121 LLNALPELVNSLTSSLEGAGSAAVAITTTDLVSKSVAIESQVGDMSVRVGGMAKGSGMIH 180
           LL+ALP LVNS + S+E A SAAVAITTTDLVSKSVA+ESQVG + +RVGGMAKGSGMIH
Sbjct: 126 LLHALPTLVNSRSDSVEEADSAAVAITTTDLVSKSVAVESQVGGIKIRVGGMAKGSGMIH 185

Query: 181 PNMATMLGVITTDALVEADVWRKMVLIAVNRSFNQITV 218
           PNMATMLGVITTDALVE+D+WRKMV +AVNRSFNQITV
Sbjct: 186 PNMATMLGVITTDALVESDIWRKMVKVAVNRSFNQITV 223