Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212401.10 - phase: 0 
         (155 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38670.1 | Symbols: PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYT...   172   7e-44
AT2G32260.1 | Symbols: ATCCT1, CCT1 | cholinephosphate cytidylyl...    70   7e-13
AT4G15130.1 | Symbols: ATCCT2, CCT2 | catalytic/ choline-phospha...    69   1e-12

>AT2G38670.1 | Symbols: PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE
           CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate
           cytidylyltransferase | chr2:16168979-16171680 FORWARD
          Length = 421

 Score =  172 bits (436), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 106/142 (74%), Gaps = 11/142 (7%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           ++ +V  +KWVDEVI+++PYAITE FM  LF+E++IDYIIHGDDPC+LPDGTDAYALAK+
Sbjct: 108 RMTMVKAVKWVDEVISDAPYAITEDFMKKLFDEYQIDYIIHGDDPCVLPDGTDAYALAKK 167

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHDDKLPLPRDACKAN---------QS 121
           AGRYKQIKRTEGVSSTDIVGR +L V +  + + H  +  L R     +          S
Sbjct: 168 AGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDTH-SRSSLQRQFSHGHSSPKFEDGASS 226

Query: 122 SGAYISQFLPTSRRIVQFSNGK 143
           +G  +S FLPTSRRIVQFSNGK
Sbjct: 227 AGTRVSHFLPTSRRIVQFSNGK 248


>AT2G32260.1 | Symbols: ATCCT1, CCT1 | cholinephosphate
           cytidylyltransferase, putative / phosphorylcholine
           transferase, putative / CTP:phosphocholine
           cytidylyltransferase, putative | chr2:13697645-13700241
           FORWARD
          Length = 332

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI ++P+ + ++F++    +H+IDY+ H   P     G   D Y   K+ GR+K+
Sbjct: 99  KWVDEVIPDAPWVVNQEFLD----KHQIDYVAHDSLPYADSSGAGKDVYEFVKKVGRFKE 154

Query: 78  IKRTEGVSSTDIVGRIL 94
            +RTEG+S++DI+ RI+
Sbjct: 155 TQRTEGISTSDIIMRIV 171


>AT4G15130.1 | Symbols: ATCCT2, CCT2 | catalytic/ choline-phosphate
           cytidylyltransferase/ nucleotidyltransferase |
           chr4:8637793-8639388 FORWARD
          Length = 304

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI ++P+ +T +F++    +HKIDY+ H   P     G   D Y   K  G++K+
Sbjct: 84  KWVDEVIPDAPWVLTTEFLD----KHKIDYVAHDALPYADTSGAGNDVYEFVKSIGKFKE 139

Query: 78  IKRTEGVSSTDIVGRIL 94
            KRTEG+S++DI+ RI+
Sbjct: 140 TKRTEGISTSDIIMRIV 156