Jatropha Genome Database

JcCB0207431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0207431.10 + phase: 2 /partial
         (135 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | SMO1-2 (...   215   8e-57
AT4G12110.1 | Symbols: SMO1-1, ATSMO1, ATSMO1-1 | SMO1-1 (STEROL...   213   4e-56
AT4G22753.1 | Symbols: SMO1-3, ATSMO1, SMO1, ATSMO1-3 | SMO1-3 (...   205   5e-54
AT1G07420.2 | Symbols: ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-M...   140   3e-34
AT1G07420.1 | Symbols: ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-M...   140   3e-34
AT2G29390.5 | Symbols: ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OX...   137   2e-33
AT2G29390.3 | Symbols: ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OX...   137   2e-33
AT2G29390.2 | Symbols: ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OX...   137   2e-33
AT2G29390.4 | Symbols: ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OX...   137   2e-33
AT2G29390.1 | Symbols: SMO2-2, ATSMO2 | SMO2-2 (STEROL 4-ALPHA-M...   129   7e-31

>AT4G22756.1 | Symbols: SMO1-2, ATSMO1, ATSMO1-2, SMO1 | SMO1-2
           (STEROL C4-METHYL OXIDASE 1-2);
           4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl
           oxidase/ C-4 methylsterol oxidase/ catalytic |
           chr4:11955124-11956695 REVERSE
          Length = 299

 Score =  215 bits (547), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 109/129 (84%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
             H KWGYEK HH+HH+YTAPIG AAPYAHWAE+L+LG P FLGPA+ PGH+IT+WLW  
Sbjct: 149 FFHCKWGYEKFHHIHHEYTAPIGYAAPYAHWAEVLLLGIPTFLGPAIAPGHMITFWLWIA 208

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LRQIEAIETHSGYD   S TKYIPFYGGAEYHDYHH VG QSQSNFAS+FTYCDYIYGTD
Sbjct: 209 LRQIEAIETHSGYDFPWSLTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTD 268

Query: 121 KVSKTRNEI 129
           K  + + ++
Sbjct: 269 KGYRFQKKL 277


>AT4G12110.1 | Symbols: SMO1-1, ATSMO1, ATSMO1-1 | SMO1-1
           (STEROL-4ALPHA-METHYL OXIDASE 1-1);
           4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl
           oxidase/ C-4 methylsterol oxidase/ catalytic |
           chr4:7254197-7256004 FORWARD
          Length = 298

 Score =  213 bits (541), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 106/121 (87%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
             HSKWGY+KIH VHH+YTAPIG AAPYAHWAE+L+LG P F+GPA+ PGH+IT+WLW  
Sbjct: 149 FFHSKWGYDKIHRVHHEYTAPIGYAAPYAHWAEVLLLGIPTFMGPAIAPGHMITFWLWIA 208

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LRQ+EAIETHSGYD   S TKYIPFYGGAEYHDYHH VG QSQSNFAS+FTYCDYIYGTD
Sbjct: 209 LRQMEAIETHSGYDFPWSPTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTD 268

Query: 121 K 121
           K
Sbjct: 269 K 269


>AT4G22753.1 | Symbols: SMO1-3, ATSMO1, SMO1, ATSMO1-3 | SMO1-3
           (STEROL 4-ALPHA METHYL OXIDASE 1-3);
           4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl
           oxidase/ catalytic | chr4:11952019-11953609 REVERSE
          Length = 291

 Score =  205 bits (522), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 94/120 (78%), Positives = 103/120 (85%)

Query: 2   LHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFIL 61
           +H KWGYEKIH +HH+YT+PIG A+PYAHWAEILILG P FLGPA+ PGHI+T+WLW  L
Sbjct: 146 MHCKWGYEKIHRIHHEYTSPIGYASPYAHWAEILILGIPTFLGPAIAPGHIMTFWLWISL 205

Query: 62  RQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTDK 121
           RQ EAIETHSGYD   S TK IPFYGG EYHDYHH VG QSQSNFAS+FTYCDYIYGTDK
Sbjct: 206 RQFEAIETHSGYDFPWSVTKLIPFYGGPEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDK 265


>AT1G07420.2 | Symbols: ATSMO2, SMO2-1 | SMO2-1 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-1);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr1:2278918-2280033 FORWARD
          Length = 228

 Score =  140 bits (353), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 82/121 (67%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LHSKW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 91  ILHSKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMV 150

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR +E +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 151 LRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 210

Query: 121 K 121
           K
Sbjct: 211 K 211


>AT1G07420.1 | Symbols: ATSMO2, SMO2-1 | SMO2-1 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-1);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr1:2277910-2280033 FORWARD
          Length = 266

 Score =  140 bits (352), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 82/121 (67%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LHSKW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 129 ILHSKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMV 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR +E +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 189 LRVLETVEAHCGYHFPWSLSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 248

Query: 121 K 121
           K
Sbjct: 249 K 249


>AT2G29390.5 | Symbols: ATSMO2 | SMO2-2 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-2);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr2:12610758-12611929 REVERSE
          Length = 219

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 86/132 (65%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 88  ILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMM 147

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR IE +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 148 LRVIETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 207

Query: 121 KVSKTRNEIEVT 132
           K  +    ++ T
Sbjct: 208 KGYRKLKALKET 219


>AT2G29390.3 | Symbols: ATSMO2 | SMO2-2 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-2);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr2:12610758-12612149 REVERSE
          Length = 253

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 86/132 (65%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 122 ILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMM 181

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR IE +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 182 LRVIETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 241

Query: 121 KVSKTRNEIEVT 132
           K  +    ++ T
Sbjct: 242 KGYRKLKALKET 253


>AT2G29390.2 | Symbols: ATSMO2 | SMO2-2 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-2);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr2:12610758-12612799 REVERSE
          Length = 260

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 86/132 (65%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 129 ILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMM 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR IE +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 189 LRVIETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 248

Query: 121 KVSKTRNEIEVT 132
           K  +    ++ T
Sbjct: 249 KGYRKLKALKET 260


>AT2G29390.4 | Symbols: ATSMO2 | SMO2-2 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-2);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr2:12610758-12611731 REVERSE
          Length = 177

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 86/132 (65%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 46  ILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMM 105

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGGAEYHDYHHCVGAQSQSNFASIFTYCDYIYGTD 120
           LR IE +E H GY    S + ++P YGGA++HDYHH +      N++S F Y D+I+GTD
Sbjct: 106 LRVIETVEAHCGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWIFGTD 165

Query: 121 KVSKTRNEIEVT 132
           K  +    ++ T
Sbjct: 166 KGYRKLKALKET 177


>AT2G29390.1 | Symbols: SMO2-2, ATSMO2 | SMO2-2 (STEROL
           4-ALPHA-METHYL-OXIDASE 2-2);
           4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4
           methylsterol oxidase | chr2:12610758-12612799 REVERSE
          Length = 272

 Score =  129 bits (323), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 12/144 (8%)

Query: 1   LLHSKWGYEKIHHVHHQYTAPIGLAAPYAHWAEILILGFPAFLGPALVPGHIITYWLWFI 60
           +LH+KW Y+ +H VHH+Y  P GL + YAH AEIL LGF   +GPAL   H+IT WLW +
Sbjct: 129 ILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPALTGPHLITLWLWMM 188

Query: 61  LRQIEAIETHSGYDIARSFTKYIPFYGG------------AEYHDYHHCVGAQSQSNFAS 108
           LR IE +E H GY    S + ++P YGG            A++HDYHH +      N++S
Sbjct: 189 LRVIETVEAHCGYHFPWSPSNFLPLYGGSLILMWESFAYSADFHDYHHRLLYTKSGNYSS 248

Query: 109 IFTYCDYIYGTDKVSKTRNEIEVT 132
            F Y D+I+GTDK  +    ++ T
Sbjct: 249 TFVYMDWIFGTDKGYRKLKALKET 272