Jatropha Genome Database

JcCB0204821.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0204821.10 - phase: 2 /pseudo/partial
         (244 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...   365   e-102
AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...   365   e-102
AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...   341   3e-94
AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...   341   3e-94

>AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
           GTP binding / GTPase/ calcium ion binding |
           chr3:7075057-7078655 REVERSE
          Length = 545

 Score =  365 bits (938), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/191 (91%), Positives = 184/191 (96%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLLK++YPGAHIGPEPTTDRFVVVMSG DERSIP
Sbjct: 190 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVMSGPDERSIP 249

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNTVAVQADMPF+GLTTFGTAFLSKFECSQMPHPLLEH+TFVDTPGVLSGEKQRTQRAYD
Sbjct: 250 GNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGEKQRTQRAYD 309

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGVTSWFA+KCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQ+ 
Sbjct: 310 FTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLM 369

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 370 RVY-GALMWSL 379


>AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
           GTP binding / GTPase/ calcium ion binding |
           chr3:7075057-7078655 REVERSE
          Length = 545

 Score =  365 bits (938), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/191 (91%), Positives = 184/191 (96%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLLK++YPGAHIGPEPTTDRFVVVMSG DERSIP
Sbjct: 190 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVMSGPDERSIP 249

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNTVAVQADMPF+GLTTFGTAFLSKFECSQMPHPLLEH+TFVDTPGVLSGEKQRTQRAYD
Sbjct: 250 GNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGEKQRTQRAYD 309

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGVTSWFA+KCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQ+ 
Sbjct: 310 FTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLM 369

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 370 RVY-GALMWSL 379


>AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
           GTP binding / GTPase/ calcium ion binding |
           chr4:2804522-2807833 FORWARD
          Length = 545

 Score =  341 bits (874), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 159/194 (81%), Positives = 176/194 (90%), Gaps = 1/194 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           TSSDFDAKPMVMLLGQYSTGKTTFIKHLL   YPGAHIGPEPTTDRFVV MSG DER+IP
Sbjct: 189 TSSDFDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIP 248

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AVQADMPFNGLT+FG AFLSKFECSQMPHP+L+ IT VDTPGVLSGEKQR QR+YD
Sbjct: 249 GNTMAVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYD 308

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGV SWFA+KCD+ILLLFDPHKLD+SDEFKRVI+SLRG++DKIRVVLNKADQVDTQQ+ 
Sbjct: 309 FTGVISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLM 368

Query: 231 ILFNNVLFWTLHCI 244
            ++   L W+L  +
Sbjct: 369 RVY-GALMWSLGKV 381


>AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
           GTP binding / GTPase/ calcium ion binding |
           chr4:2804522-2807833 FORWARD
          Length = 546

 Score =  341 bits (874), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 159/194 (81%), Positives = 176/194 (90%), Gaps = 1/194 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           TSSDFDAKPMVMLLGQYSTGKTTFIKHLL   YPGAHIGPEPTTDRFVV MSG DER+IP
Sbjct: 190 TSSDFDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIP 249

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AVQADMPFNGLT+FG AFLSKFECSQMPHP+L+ IT VDTPGVLSGEKQR QR+YD
Sbjct: 250 GNTMAVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYD 309

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGV SWFA+KCD+ILLLFDPHKLD+SDEFKRVI+SLRG++DKIRVVLNKADQVDTQQ+ 
Sbjct: 310 FTGVISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLM 369

Query: 231 ILFNNVLFWTLHCI 244
            ++   L W+L  +
Sbjct: 370 RVY-GALMWSLGKV 382