Jatropha Genome Database
- JcCB0203531.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0203531.20 - phase: 0
(269 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32340.1 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 159 2e-39
AT1G80130.1 | Symbols: | binding | chr1:30141250-30142478 REVERSE 137 5e-33
AT5G20190.1 | Symbols: | binding | chr5:6814093-6815171 FORWARD 134 7e-32
AT4G17940.1 | Symbols: | binding | chr4:9965787-9966778 FORWARD 115 2e-26
AT1G04530.1 | Symbols: | binding | chr1:1234456-1235895 REVERSE 93 1e-19
AT1G07280.3 | Symbols: | binding | chr1:2238505-2240991 FORWARD 75 4e-14
AT1G07280.2 | Symbols: | binding | chr1:2238505-2240991 FORWARD 75 4e-14
AT1G07280.1 | Symbols: | binding | chr1:2238505-2240991 FORWARD 75 4e-14
AT2G29670.1 | Symbols: | binding | chr2:12682309-12684745 REVERSE 74 1e-13
AT3G47080.1 | Symbols: | binding | chr3:17338415-17340129 REVERSE 72 3e-13
>AT4G32340.1 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: binding (TAIR:AT1G80130.1);
Has 2680 Blast hits to 1282 proteins in 184 species:
Archae - 2; Bacteria - 433; Metazoa - 1247; Fungi - 71;
Plants - 657; Viruses - 13; Other Eukaryotes - 257
(source: NCBI BLink). | chr4:15612741-15614219 REVERSE
Length = 238
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
Query: 135 MDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMA-NARDGDVLSMYGD 193
+D YY+ MI+ YPGD LLL+NYA+FLKEV+GD KAE+ CE+A+++ + RDG++LSMYGD
Sbjct: 110 VDGYYEEMIQRYPGDTLLLSNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGD 169
Query: 194 LIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDA 233
LIW NH D RAQ+Y+D+AVQSSPDDC VLASYARFLWDA
Sbjct: 170 LIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASYARFLWDA 209
>AT1G80130.1 | Symbols: | binding | chr1:30141250-30142478 REVERSE
Length = 305
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 79/101 (78%)
Query: 131 SHERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSM 190
S + D YY+ MI++ PG++LL NYAKFLKEV+GD KAE+ CE+A++ N DG+VLS+
Sbjct: 161 SEDATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSL 220
Query: 191 YGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLW 231
Y DLI +NH+D RA +Y+ +AV+ SP+DCYV ASYARFLW
Sbjct: 221 YADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLW 261
>AT5G20190.1 | Symbols: | binding | chr5:6814093-6815171 FORWARD
Length = 290
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 79/98 (80%)
Query: 136 DNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDLI 195
D +Y+ MIE PG+ + L+NYAKFLKEVR D +KAE+ C +A++ + DG+VL+MY +L+
Sbjct: 157 DVHYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELV 216
Query: 196 WNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDA 233
W HKD++RA+ YF++AV ++P+DCYV ASYARFLWDA
Sbjct: 217 WKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDA 254
>AT4G17940.1 | Symbols: | binding | chr4:9965787-9966778 FORWARD
Length = 274
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%)
Query: 134 RMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGD 193
++ +YY+ M+ + P ++LLL NY KFL EV D AE+ +A++ N DG+ LSMYG
Sbjct: 149 KIGDYYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGR 208
Query: 194 LIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDA 233
LIW +D RAQ YFD+AV +SP+DC VL SYARF+W+A
Sbjct: 209 LIWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEA 248
>AT1G04530.1 | Symbols: | binding | chr1:1234456-1235895 REVERSE
Length = 310
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 137 NYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSMYGDLIW 196
+YY+ M+E YP LLL NYAKFL E +GD AE+ K + DG L+ YG L+
Sbjct: 123 DYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVM 181
Query: 197 NNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWD 232
H+D A+A +YF+ AVQ+SPDD VLA+YA FLW+
Sbjct: 182 KLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWE 217
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 20/119 (16%)
Query: 137 NYYQIMIETYPGDALLLANYAKFLKEVRG-------------------DNVKAEKVCE-K 176
+Y++ ++ P D+++LA YA FL E+ D +A+ + K
Sbjct: 192 SYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESSGQGKDEFEADAAGKGK 251
Query: 177 ALMANARDGDVLSMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGE 235
+ ++ DG+ L Y W+ + D+ +A YF++AV++SP+D +L YARFLW+ E
Sbjct: 252 SSLSKTEDGETLCRYAKAFWSINNDHEKALFYFEKAVEASPNDSIILGEYARFLWEIDE 310
>AT1G07280.3 | Symbols: | binding | chr1:2238505-2240991 FORWARD
Length = 552
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 133 ERMDNY-----YQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDV 187
E MD + YQ + PG+ LLLANYA+FL + D +AEK ++A A D +
Sbjct: 428 ESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEA 487
Query: 188 LSMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
L+ Y +W D RA+ + EA+ + P + A+YA FLW+ G +E
Sbjct: 488 LNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
>AT1G07280.2 | Symbols: | binding | chr1:2238505-2240991 FORWARD
Length = 552
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 133 ERMDNY-----YQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDV 187
E MD + YQ + PG+ LLLANYA+FL + D +AEK ++A A D +
Sbjct: 428 ESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEA 487
Query: 188 LSMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
L+ Y +W D RA+ + EA+ + P + A+YA FLW+ G +E
Sbjct: 488 LNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
>AT1G07280.1 | Symbols: | binding | chr1:2238505-2240991 FORWARD
Length = 552
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 133 ERMDNY-----YQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDV 187
E MD + YQ + PG+ LLLANYA+FL + D +AEK ++A A D +
Sbjct: 428 ESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDRAEKYFKRAAKAEPADAEA 487
Query: 188 LSMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
L+ Y +W D RA+ + EA+ + P + A+YA FLW+ G +E
Sbjct: 488 LNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGDE 537
>AT2G29670.1 | Symbols: | binding | chr2:12682309-12684745 REVERSE
Length = 536
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 129 DLSHERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVL 188
D + + + YQ + P + LLLANYA+FL V D+ +AE+ ++A+ +D +
Sbjct: 414 DTGYFKTELMYQTELSQEPNNPLLLANYAQFLYLVSNDHDRAEEYFKRAVGVEPKDAEAF 473
Query: 189 SMYGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAG 234
S Y +W D A+ F EA+ + P + Y A+YA FLW+ G
Sbjct: 474 SKYATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYANFLWNTG 519
>AT3G47080.1 | Symbols: | binding | chr3:17338415-17340129 REVERSE
Length = 515
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%)
Query: 131 SHERMDNYYQIMIETYPGDALLLANYAKFLKEVRGDNVKAEKVCEKALMANARDGDVLSM 190
++ R + Y+I + P + LLLANYA+FL V D+ +AE +KA+ + D + S
Sbjct: 396 NYTRTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVDAETYSK 455
Query: 191 YGDLIWNNHKDNARAQTYFDEAVQSSPDDCYVLASYARFLWDAGEEE 237
Y +W D A+ F EA+ + P + + A+YA FLW+ G EE
Sbjct: 456 YAIFLWKVRNDLWAAEENFLEAISADPTNSFYAANYANFLWNTGGEE 502