Jatropha Genome Database
- JcCB0201931.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0201931.10 - phase: 0 /partial
(276 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23340.1 | Symbols: | INVOLVED IN: biological_process unknow... 410 e-115
AT4G15475.1 | Symbols: | F-box family protein (FBL4) | chr4:884... 109 2e-24
AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD 108 4e-24
AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX PRO... 102 3e-22
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; ubiquitin-protei... 101 5e-22
AT3G07550.2 | Symbols: | F-box family protein (FBL12) | chr3:24... 96 3e-20
AT3G07550.1 | Symbols: | F-box family protein (FBL12) | chr3:24... 96 3e-20
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 94 1e-19
AT3G58530.1 | Symbols: | F-box family protein-related | chr3:21... 87 9e-18
AT5G01720.1 | Symbols: | F-box family protein (FBL3) | chr5:267... 86 2e-17
AT5G25350.1 | Symbols: EBF2 | EBF2 (EIN3-BINDING F BOX PROTEIN 2... 84 8e-17
AT5G51380.1 | Symbols: | F-box family protein | chr5:20875945-2... 84 1e-16
AT1G80570.1 | Symbols: | F-box family protein (FBL14) | chr1:30... 74 1e-13
AT1G80570.3 | Symbols: | F-box family protein (FBL14) | chr1:30... 74 1e-13
AT1G80570.2 | Symbols: | F-box family protein (FBL14) | chr1:30... 74 1e-13
AT2G44900.1 | Symbols: | armadillo/beta-catenin repeat family p... 70 1e-12
AT3G60350.1 | Symbols: | armadillo/beta-catenin repeat family p... 69 3e-12
AT5G21900.1 | Symbols: | unknown protein | chr5:7238239-7240338... 67 8e-12
AT5G67140.1 | Symbols: | F-box family protein | chr5:26794009-2... 65 6e-11
AT5G51370.1 | Symbols: | F-box family protein | chr5:20872783-2... 64 8e-11
AT2G06040.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 1e-10
AT1G55590.1 | Symbols: | F-box family protein | chr1:20769476-2... 64 1e-10
AT5G51370.2 | Symbols: | F-box family protein | chr5:20872783-2... 64 1e-10
AT1G80630.1 | Symbols: | leucine-rich repeat family protein | c... 62 4e-10
AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PROTEINE 1); ubiq... 61 9e-10
AT2G17020.1 | Symbols: | F-box family protein (FBL10) | chr2:73... 60 1e-09
AT5G07670.1 | Symbols: | F-box family protein | chr5:2430421-24... 60 2e-09
AT1G15740.1 | Symbols: | leucine-rich repeat family protein | c... 59 3e-09
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1 INTERACTIN... 58 6e-09
AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2); ubiq... 58 8e-09
AT5G57900.1 | Symbols: SKIP1 | SKIP1 (SKP1 INTERACTING PARTNER 1... 54 1e-07
AT4G05460.1 | Symbols: | F-box family protein (FBL20) | chr4:27... 54 1e-07
AT4G03630.1 | Symbols: | root nodule development protein-relate... 53 2e-07
AT4G08980.5 | Symbols: | F-box family protein (FBW2) | chr4:575... 53 2e-07
AT4G08980.4 | Symbols: | F-box family protein (FBW2) | chr4:575... 53 2e-07
AT4G08980.2 | Symbols: | F-box family protein (FBW2) | chr4:575... 53 2e-07
AT4G08980.3 | Symbols: | F-box family protein (FBW2) | chr4:575... 53 2e-07
AT4G08980.1 | Symbols: | F-box family protein (FBW2) | chr4:575... 53 2e-07
AT4G33210.1 | Symbols: | F-box family protein (FBL15) | chr4:16... 52 3e-07
AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PROTEINE 3); ubiq... 51 6e-07
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROT... 50 2e-06
AT2G36370.1 | Symbols: | ubiquitin-protein ligase | chr2:152478... 49 4e-06
>AT5G23340.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: F-box family
protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits
to 3545 proteins in 210 species: Archae - 0; Bacteria -
454; Metazoa - 4575; Fungi - 774; Plants - 2118; Viruses
- 15; Other Eukaryotes - 1159 (source: NCBI BLink). |
chr5:7856314-7857983 FORWARD
Length = 405
Score = 410 bits (1055), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/274 (73%), Positives = 241/274 (87%)
Query: 3 SSICINEILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM 62
SS+C+NE LTDDELR +LS+L+SDKDKE+FGLVCKRWL LQST+RKKLAARAGPHML+++
Sbjct: 2 SSVCVNEALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLRRL 61
Query: 63 AQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGC 122
A RF++++ELDLSQSISRSFYPGVTDSDLAVI+ GFK LR+L+L CKGITD+G+ SIG
Sbjct: 62 ASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGR 121
Query: 123 GLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDL 182
LS LQ LDVS+CRKL+DKGL AVAEGC DL++LHLAGCR ITD L++LS C L+ L
Sbjct: 122 CLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEAL 181
Query: 183 GLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYK 242
GLQGCT+ITD GL LV GC++I+ LDINKCSN+GD G+S+++KAC+S LKTLK+LDCYK
Sbjct: 182 GLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYK 241
Query: 243 VGDESISSLAKYCNNLETLIIGGCRDISDNSIKL 276
VG+ESISSLA++C NLETLIIGGCRDISD SI L
Sbjct: 242 VGNESISSLAQFCKNLETLIIGGCRDISDESIML 275
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIG--CGLSSLQSLDVSFCRKLTDKGL 143
+TDS LA + G + ++ L + C + D+G+ S+ C SSL++L + C K+ ++ +
Sbjct: 189 ITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACA-SSLKTLKLLDCYKVGNESI 247
Query: 144 LAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCH-KLQDLGLQGCTSITDDGLTYLVSGC 202
++A+ CK+L++L + GCR I+D + L+++C L++L + C +I+D L+ ++ C
Sbjct: 248 SSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQC 307
Query: 203 QQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETL 261
+ ++ LDI C + D +L LK LK+ +C K+ I L C++LE +
Sbjct: 308 KNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYI 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIG--CGLSSLQSLDVSFCRKLTDKGL 143
V + ++ +A K L L + C+ I+D + + C SL++L + +C ++D L
Sbjct: 242 VGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCK-DSLKNLRMDWCLNISDSSL 300
Query: 144 LAVAEGCKDLQSLHLAGCRLITDGLLRAL-SNNCHKLQDLGLQGCTSITDDGLTYLVSGC 202
+ + CK+L++L + C +TD R L S++ L+ L + CT IT G+ L+ C
Sbjct: 301 SCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKC 360
Query: 203 QQIQFLDINKCSNIGDVGISNLSKACSSCLKT 234
++++D+ ++ +V S C K
Sbjct: 361 SSLEYIDVRSLPHVTEVRCSEAGLEFPKCCKV 392
>AT4G15475.1 | Symbols: | F-box family protein (FBL4) |
chr4:8845927-8848701 FORWARD
Length = 610
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 8/216 (3%)
Query: 59 LQKMAQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMR 118
L +AQ RL L L Q +S VTD A + L L+L + TD GMR
Sbjct: 261 LIAVAQGCHRLKNLKL-QCVS------VTDVAFAAVGELCTSLERLALYSFQHFTDKGMR 313
Query: 119 SIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHK 178
+IG G L+ L +S C ++ KGL A+A GCK+L+ + + GC I + A+ +C +
Sbjct: 314 AIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPR 373
Query: 179 LQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKML 238
L++L L C I + L + GC+ ++ L + CS IGD+ + +++K C + LK L +
Sbjct: 374 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRN-LKKLHIR 432
Query: 239 DCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
CY++G++ I S+ K+C +L L + C + + ++
Sbjct: 433 RCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKAL 468
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
+ D L +A G L+ L LQ C +TD ++G +SL+ L + + TDKG+ A
Sbjct: 256 IHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRA 314
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQI 205
+ +G K L+ L L+ C ++ L A+++ C +L+ + + GC +I G+ + C ++
Sbjct: 315 IGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRL 374
Query: 206 QFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGG 265
+ L + C IG+ + + K C S L+ L ++DC +GD ++ S+AK C NL+ L I
Sbjct: 375 KELALLYCQRIGNSALQEIGKGCKS-LEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 433
Query: 266 CRDISDNSI 274
C +I + I
Sbjct: 434 CYEIGNKGI 442
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 46/311 (14%)
Query: 7 INEILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKL---AARAGPHMLQKMA 63
IN L ++ + I +LES +++ LVCKRWL L+ R L A+ + + ++
Sbjct: 7 INNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLS 66
Query: 64 QRFSRLIELDLSQSI------------------------------SRSFYPG-------- 85
+RF + + + + I + + G
Sbjct: 67 RRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSS 126
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
+TD+ L +A+GF + LSL +C ++ G+ S+ +SL+SLD+ C + D+GL A
Sbjct: 127 LTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAA 185
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHK-LQDLGLQGCTSITDDGLTYLVSGCQQ 204
V + CK L+ L+L C +TD + L C K L+ +G+ ITD L + S C+
Sbjct: 186 VGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKL 245
Query: 205 IQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIG 264
++ L ++ I D G+ +++ C LK LK L C V D + +++ + C +LE L +
Sbjct: 246 LEVLYLDS-EYIHDKGLIAVAQGCHR-LKNLK-LQCVSVTDVAFAAVGELCTSLERLALY 302
Query: 265 GCRDISDNSIK 275
+ +D ++
Sbjct: 303 SFQHFTDKGMR 313
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 11/215 (5%)
Query: 62 MAQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIG 121
+AQ+ + L LDL + Y G D LA + K L L+L++C+G+TD G+ +
Sbjct: 161 LAQKCTSLKSLDL-----QGCYVG--DQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLV 213
Query: 122 CGLS-SLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQ 180
G S SL+S+ V+ K+TD L AV CK L+ L+L I D L A++ CH+L+
Sbjct: 214 VGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDS-EYIHDKGLIAVAQGCHRLK 272
Query: 181 DLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDC 240
+L LQ C S+TD + C ++ L + + D G+ + K S LK L + DC
Sbjct: 273 NLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKG-SKKLKDLTLSDC 330
Query: 241 YKVGDESISSLAKYCNNLETLIIGGCRDISDNSIK 275
Y V + + ++A C LE + I GC +I I+
Sbjct: 331 YFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIE 365
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 101 LRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAG 160
L+ L+L YC+ I +S ++ IG G SL+ L + C + D + ++A+GC++L+ LH+
Sbjct: 374 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 433
Query: 161 CRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVG 220
C I + + ++ +C L +L L+ C + + L + GC +Q L+++ C+ I D G
Sbjct: 434 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCS-LQQLNVSGCNQISDAG 492
Query: 221 ISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
I+ +++ C L L + +GD ++ L + C L+ L++ C I+DN +
Sbjct: 493 ITAIARGCPQ-LTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGL 545
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLL 144
G+ D + IA G + L+ L ++ C I + G+ SIG SL L + FC K+ +K L+
Sbjct: 410 GIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALI 469
Query: 145 AVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQ 204
A+ +GC LQ L+++GC I+D + A++ C +L L + +I D L L GC
Sbjct: 470 AIGKGC-SLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPM 528
Query: 205 IQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLII 263
++ L ++ C +I D G+++L + C L+T M+ C + ++++ C +++ ++I
Sbjct: 529 LKDLVLSHCHHITDNGLNHLVQKC-KLLETCHMVYCPGITSAGVATVVSSCPHIKKVLI 586
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
V+ L IAHG K L + + C I G+ +IG L+ L + +C+++ + L
Sbjct: 333 VSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQE 392
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQI 205
+ +GCK L+ LHL C I D + +++ C L+ L ++ C I + G+ + C+ +
Sbjct: 393 IGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSL 452
Query: 206 QFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGG 265
L + C +G+ + + K CS L+ L + C ++ D I+++A+ C L L I
Sbjct: 453 TELSLRFCDKVGNKALIAIGKGCS--LQQLNVSGCNQISDAGITAIARGCPQLTHLDISV 510
Query: 266 CRDISD 271
++I D
Sbjct: 511 LQNIGD 516
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 78 ISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRK 137
+S F V + L I G L+ L++ C I+D+G+ +I G L LD+S +
Sbjct: 455 LSLRFCDKVGNKALIAIGKGCS-LQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQN 513
Query: 138 LTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTY 197
+ D L + EGC L+ L L+ C ITD L L C L+ + C IT G+
Sbjct: 514 IGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVAT 573
Query: 198 LVSGCQQIQFLDINK 212
+VS C I+ + I K
Sbjct: 574 VVSSCPHIKKVLIEK 588
>AT1G21410.1 | Symbols: SKP2A | SKP2A | chr1:7497479-7499386 FORWARD
Length = 360
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 98 FKGLRILSLQYCKG-ITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSL 156
F L+ L+L+ K + D+ + +I LQ LD+S K+TD+ L A+A GC DL L
Sbjct: 89 FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKL 148
Query: 157 HLAGCRLITDGLLRALSNNCHKLQDLGLQGCT-SITDDGLTYLVSGCQQIQFLDINKCSN 215
+L+GC +D + L+ C KL+ L L GC ++TD+ L + + C Q+Q L++ C N
Sbjct: 149 NLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCEN 208
Query: 216 IGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
I D G+ +L+ C L+TL + C + DES+ +LA +C +L +L + CR+I+D ++
Sbjct: 209 ISDDGVMSLAYGCPD-LRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAM 266
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 110/200 (55%), Gaps = 22/200 (11%)
Query: 20 LSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSRLIELDLSQSIS 79
LS ++ + + LV ++++LQ+ ++ + + ++ +A L ELDLS+S+
Sbjct: 71 LSWCNNNMNSLVLSLV-PKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLK 129
Query: 80 ---RSFY------PGVT-----------DSDLAVIAHGFKGLRILSLQYC-KGITDSGMR 118
RS Y P +T D+ +A + + L++L+L C K +TD+ +
Sbjct: 130 ITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALE 189
Query: 119 SIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHK 178
+IG + +QSL++ +C ++D G++++A GC DL++L L GC LITD + AL++ C
Sbjct: 190 AIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVH 249
Query: 179 LQDLGLQGCTSITDDGLTYL 198
L+ LGL C +ITD + L
Sbjct: 250 LRSLGLYYCRNITDRAMYSL 269
>AT2G25490.1 | Symbols: EBF1, FBL6 | EBF1 (EIN3-BINDING F BOX
PROTEIN 1); protein binding / ubiquitin-protein ligase |
chr2:10848018-10850275 REVERSE
Length = 628
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 9 EILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSR 68
++L D+ L I +L +++ V K+WL L S+ R QK S+
Sbjct: 65 DVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIR------------QKEIDVPSK 112
Query: 69 LIEL--DLSQSISRSF-YPGVTDSDLAVIAHGFKGLRILSLQYCKG-----ITDSGMRSI 120
+ E D +SRS TD LA IA G G L +G ++D G+RSI
Sbjct: 113 ITEDGDDCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSI 172
Query: 121 GCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQ 180
G SL SL + +TD GLL +AEGC L+ L L C ITD L A++ +C L
Sbjct: 173 GRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLT 232
Query: 181 DLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDC 240
+L L+ C+ I D+GL + C +++ + I C + D GI++L + L LK L
Sbjct: 233 ELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLK-LQM 291
Query: 241 YKVGDESISSLAKYCNNLETLIIGGCRDISD 271
V D S++ + Y ++ L++ G +S+
Sbjct: 292 LNVTDVSLAVVGHYGLSITDLVLAGLSHVSE 322
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 100 GLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLA 159
LR LS++ C G D+ + +IG L+ +D+ + +T+ G L + + L ++ +
Sbjct: 442 ALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQ--SSLVKINFS 499
Query: 160 GCRLITDGLLRALS-NNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGD 218
GC +TD ++ A++ N L+ L + GC++ITD L + + CQ + LDI+KC+ I D
Sbjct: 500 GCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCA-ISD 558
Query: 219 VGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
GI L+ + L+ L + C V D+S+ ++ + L L + CR IS++++
Sbjct: 559 SGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTV 614
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 136 RKLTDKGLLAVAEGCKD---LQSLHLAGCR--LITDGLLRALSNNCHKLQDLGLQGCTSI 190
+K TD L A+A G L L + G ++D LR++ +C L L L ++I
Sbjct: 131 KKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTI 190
Query: 191 TDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISS 250
TD+GL + GC Q++ L++N+CS I D G+ ++K+C + L L + C ++GDE + +
Sbjct: 191 TDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPN-LTELTLEACSRIGDEGLLA 249
Query: 251 LAKYCNNLETLIIGGCRDISDNSI 274
+A+ C+ L+++ I C + D I
Sbjct: 250 IARSCSKLKSVSIKNCPLVRDQGI 273
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 73 DLSQSISRSFYPGVTDSDLAVIAH-------------GFKGLRILSLQYCKGITDSGMRS 119
D+S ++ + +TD LA ++H G + L L++ C+G+TD G+ S
Sbjct: 296 DVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLES 355
Query: 120 IGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITD-GLLRALSNNCHK 178
+G G +++ +S L+D GL++ A+ L+SL L C +T G +L N K
Sbjct: 356 VGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEK 415
Query: 179 LQDLGLQGCTSITD--DGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACS------- 229
L+ L C SI D GL S C ++ L I C GD ++ + K C
Sbjct: 416 LKAFSLVNCLSIRDLTTGLPA-SSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDL 474
Query: 230 ----------------SCLKTLKMLDCYKVGDESISSL-AKYCNNLETLIIGGCRDISDN 272
S L + C + D IS++ A+ LE L I GC +I+D
Sbjct: 475 CGLKGITESGFLHLIQSSLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDA 534
Query: 273 SI 274
S+
Sbjct: 535 SL 536
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSI--GCGLSSLQSLDVSFCRKLTDKGL 143
VTD LAV+ H + L L +++ G + G GL L SL ++ C+ +TD GL
Sbjct: 294 VTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGL 353
Query: 144 LAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC- 202
+V +GC +++ ++ L++D L + + L+ L L+ C +T G + C
Sbjct: 354 ESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCG 413
Query: 203 QQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLI 262
++++ + C +I D+ + + S L++L + +C GD +++++ K C LE +
Sbjct: 414 EKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDID 473
Query: 263 IGGCRDISDN 272
+ G + I+++
Sbjct: 474 LCGLKGITES 483
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 84 PGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGL 143
PG D++LA I L + L KGIT+SG + SSL ++ S C LTD+ +
Sbjct: 452 PGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLI--QSSLVKINFSGCSNLTDRVI 509
Query: 144 LAV-AEGCKDLQSLHLAGCRLITDGLLRALSNNCH------------------------- 177
A+ A L+ L++ GC ITD L +++ NC
Sbjct: 510 SAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDK 569
Query: 178 -KLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGD 218
KLQ L + GC+ +TD L +V + L++ +C +I +
Sbjct: 570 LKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISN 611
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | SKP2B; ubiquitin-protein
ligase | chr1:28940888-28942401 FORWARD
Length = 360
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Query: 94 IAHGFKGLRILSLQYCKG-ITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKD 152
+A F L+ L L+ K + D+ + +I LQ LD+S K+TD L ++A GC +
Sbjct: 85 LAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTN 144
Query: 153 LQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCT-SITDDGLTYLVSGCQQIQFLDIN 211
L L+L+GC +D L L+ C KL+ L L GC +++D+ L + C Q+Q L++
Sbjct: 145 LTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG 204
Query: 212 KCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISD 271
C NI D G+ +L+ C L+TL + C + DES+ +LA C +L +L + CR+I+D
Sbjct: 205 WCENISDDGVMSLAYGCPD-LRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITD 263
Query: 272 NSI 274
++
Sbjct: 264 RAM 266
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 57 HMLQKMAQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYC-KGITDS 115
H L +A+ + L +L+LS S S D+ LA + + L+IL+L C + ++D+
Sbjct: 133 HSLYSLARGCTNLTKLNLSGCTSFS------DTALAHLTRFCRKLKILNLCGCVEAVSDN 186
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNN 175
+++IG + LQSL++ +C ++D G++++A GC DL++L L C LITD + AL+N
Sbjct: 187 TLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANR 246
Query: 176 CHKLQDLGLQGCTSITDDGLTYL 198
C L+ LGL C +ITD + L
Sbjct: 247 CIHLRSLGLYYCRNITDRAMYSL 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLL 144
V+D+ L I L+ L+L +C+ I+D G+ S+ G L++LD+ C +TD+ ++
Sbjct: 182 AVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVV 241
Query: 145 AVAEGCKDLQSLHLAGCRLITDGLLRALS 173
A+A C L+SL L CR ITD + +L+
Sbjct: 242 ALANRCIHLRSLGLYYCRNITDRAMYSLA 270
>AT3G07550.2 | Symbols: | F-box family protein (FBL12) |
chr3:2409946-2411133 FORWARD
Length = 395
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 62/324 (19%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLA-------------ARAGP- 56
L DD L I +L+S D + FGL C RWL +Q+ R+ L ++ P
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTNPD 77
Query: 57 ---HMLQKMAQRFSRLIELDLS-------QSISRSFYPG-------------VTDSDLAV 93
H L ++ RF L L LS S+ YPG ++D ++
Sbjct: 78 VSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGIST 137
Query: 94 IAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL 153
IA L ++SL C I+D G+ ++ SL+ +++S+C ++D G+ A+++ C L
Sbjct: 138 IASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQL 196
Query: 154 QSLHLAGCRLIT--------DGLLRALSNNCH-------------KLQDLGLQGCT-SIT 191
+S+ ++ C+ IT L +++C ++ L + G + I
Sbjct: 197 ESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIR 256
Query: 192 DDGLTYLVSG-CQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISS 250
DGL + SG +++ L++ C +GD I ++K C L+ + C++V +
Sbjct: 257 KDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGC-PLLQEWNLALCHEVKISGWEA 315
Query: 251 LAKYCNNLETLIIGGCRDISDNSI 274
+ K+C NL+ L + CR++ D +
Sbjct: 316 VGKWCRNLKKLHVNRCRNLCDQGL 339
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 112 ITDSGMRSIGCGLSS-LQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLR 170
I G+ IG G++S L+ L++ CR + D+ + A+A+GC LQ +LA C +
Sbjct: 255 IRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWE 314
Query: 171 ALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGI 221
A+ C L+ L + C ++ D GL L GC +Q L +N + + I
Sbjct: 315 AVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 101 LRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAG 160
LRIL+L+ C+ + D + +I G LQ +++ C ++ G AV + C++L+ LH+
Sbjct: 271 LRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNR 330
Query: 161 CRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGL 195
CR + D L AL C LQ L + G +T +
Sbjct: 331 CRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
V D + IA G L+ +L C + SG ++G +L+ L V+ CR L D+GLLA
Sbjct: 282 VGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLA 341
Query: 146 VAEGCKDLQSLHLAG 160
+ GC +LQ L++ G
Sbjct: 342 LRCGCMNLQILYMNG 356
>AT3G07550.1 | Symbols: | F-box family protein (FBL12) |
chr3:2409946-2411133 FORWARD
Length = 395
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 62/324 (19%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLA-------------ARAGP- 56
L DD L I +L+S D + FGL C RWL +Q+ R+ L ++ P
Sbjct: 18 LPDDCLSFIFQRLDSVADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTNPD 77
Query: 57 ---HMLQKMAQRFSRLIELDLS-------QSISRSFYPG-------------VTDSDLAV 93
H L ++ RF L L LS S+ YPG ++D ++
Sbjct: 78 VSSHHLHRLLTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGIST 137
Query: 94 IAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL 153
IA L ++SL C I+D G+ ++ SL+ +++S+C ++D G+ A+++ C L
Sbjct: 138 IASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNLSYCPLVSDFGIKALSQACLQL 196
Query: 154 QSLHLAGCRLIT--------DGLLRALSNNCH-------------KLQDLGLQGCT-SIT 191
+S+ ++ C+ IT L +++C ++ L + G + I
Sbjct: 197 ESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIR 256
Query: 192 DDGLTYLVSG-CQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISS 250
DGL + SG +++ L++ C +GD I ++K C L+ + C++V +
Sbjct: 257 KDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGC-PLLQEWNLALCHEVKISGWEA 315
Query: 251 LAKYCNNLETLIIGGCRDISDNSI 274
+ K+C NL+ L + CR++ D +
Sbjct: 316 VGKWCRNLKKLHVNRCRNLCDQGL 339
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 112 ITDSGMRSIGCGLSS-LQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLR 170
I G+ IG G++S L+ L++ CR + D+ + A+A+GC LQ +LA C +
Sbjct: 255 IRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWE 314
Query: 171 ALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGI 221
A+ C L+ L + C ++ D GL L GC +Q L +N + + I
Sbjct: 315 AVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 101 LRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAG 160
LRIL+L+ C+ + D + +I G LQ +++ C ++ G AV + C++L+ LH+
Sbjct: 271 LRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNR 330
Query: 161 CRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGL 195
CR + D L AL C LQ L + G +T +
Sbjct: 331 CRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAI 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
V D + IA G L+ +L C + SG ++G +L+ L V+ CR L D+GLLA
Sbjct: 282 VGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLA 341
Query: 146 VAEGCKDLQSLHLAG 160
+ GC +LQ L++ G
Sbjct: 342 LRCGCMNLQILYMNG 356
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE
Length = 642
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 104 LSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRL 163
+ L C +TD GM S+ +L++L+++ C +TD + AVA+ C++L +L L C L
Sbjct: 330 IGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHL 389
Query: 164 ITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISN 223
IT+ L++L +Q+L L C + D GL Y +S C +Q L + C+NI D GI +
Sbjct: 390 ITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEY-ISKCSNLQRLKLGLCTNISDKGIFH 448
Query: 224 LSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSIK 275
+ CS L+ L + C GD+ +++L++ C +L LI+ C +++D ++
Sbjct: 449 IGSKCSKLLE-LDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVE 499
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
VTD ++ +A + L L L+ C IT+ G++S+GC +Q LD++ C + D+GL
Sbjct: 364 VTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEY 423
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQI 205
+++ C +LQ L L C I+D + + + C KL +L L C DDGL L GC+ +
Sbjct: 424 ISK-CSNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSL 482
Query: 206 QFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGG 265
L ++ C + D G+ + + L L++ + ++++A C L L +
Sbjct: 483 NRLILSYCCELTDTGVEQIRQL--ELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKL 540
Query: 266 CRDISDN 272
C +I D+
Sbjct: 541 CENIDDS 547
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 66 FSRLI-ELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGL 124
+S L+ ELDL+ GV D L I+ L+ L L C I+D G+ IG
Sbjct: 401 YSMLVQELDLTDCY------GVNDRGLEYISK-CSNLQRLKLGLCTNISDKGIFHIGSKC 453
Query: 125 SSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGL 184
S L LD+ C D GL A++ GCK L L L+ C +TD + + L L L
Sbjct: 454 SKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQI-RQLELLSHLEL 512
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLS 225
+G +IT GL + SGC+++ +LD+ C NI D G L+
Sbjct: 513 RGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALA 553
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 52/242 (21%)
Query: 83 YPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKG 142
Y +T+ + IA K L +L + C I D G++ + G SLQ +DV+ C +++ G
Sbjct: 207 YLKITNDSIRSIALLVK-LEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSG 265
Query: 143 LLAVAEGCKDLQSLHLAGC-RLITDGLLRALSNNCH------------------------ 177
L+++ G D+Q L + C ++ L+ + H
Sbjct: 266 LISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCR 325
Query: 178 KLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKAC--------S 229
L ++GL C +TD G+ L C ++ L++ C + DV IS ++++C
Sbjct: 326 SLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLE 385
Query: 230 SC-----------------LKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDN 272
SC ++ L + DCY V D + ++K C+NL+ L +G C +ISD
Sbjct: 386 SCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISK-CSNLQRLKLGLCTNISDK 444
Query: 273 SI 274
I
Sbjct: 445 GI 446
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 62 MAQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIG 121
+ + S+L+ELDL + G D LA ++ G K L L L YC +TD+G+ I
Sbjct: 449 IGSKCSKLLELDLYRC------AGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIR 502
Query: 122 CGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQD 181
L L L++ + +T GL A+A GCK L L + C I D AL+ L+
Sbjct: 503 -QLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQ 561
Query: 182 LGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSC 231
+ L C S++D L L+S ++Q +D+ S + G +AC +
Sbjct: 562 INLCNC-SVSDTALCMLMSNLSRVQDVDLVHLSRVTVEGFEFALRACCNR 610
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 38/278 (13%)
Query: 1 MASSICINEILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQ 60
M++S I +L++D L + L+ K + L+ K +LR+ S R + L
Sbjct: 1 MSTSPSILSVLSEDLLVRVYECLDPPCRKT-WRLISKDFLRVDSLTRTTIRI-LRVEFLP 58
Query: 61 KMAQRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSI 120
+ ++ L LDLS P + D + +A D + ++
Sbjct: 59 TLLFKYPNLSSLDLS------VCPKLDDDVVLRLA-----------------LDGAISTL 95
Query: 121 GCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQ 180
G ++SL++S + +GL +A C L+ + ++ C D ALS+ L+
Sbjct: 96 G-----IKSLNLSRSTAVRARGLETLARMCHALERVDVSHCWGFGDREAAALSSA-TGLR 149
Query: 181 DLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDC 240
+L + C S++D GL +V GC + + + C I D+GI L K C K LK LD
Sbjct: 150 ELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKIC----KGLKSLDV 205
Query: 241 --YKVGDESISSLAKYCNNLETLIIGGCRDISDNSIKL 276
K+ ++SI S+A LE L + C I D ++
Sbjct: 206 SYLKITNDSIRSIALLV-KLEVLDMVSCPLIDDGGLQF 242
>AT3G58530.1 | Symbols: | F-box family protein-related |
chr3:21645759-21648219 FORWARD
Length = 353
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 31/225 (13%)
Query: 76 QSISRSFYPGVTDSDLAVI----AHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLD 131
+ I+ F GV DS L ++ L L+L C+ I+D+G+ +I L+
Sbjct: 84 KHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFS 143
Query: 132 VSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSIT 191
+ + ++TD G+ + + C+ + L+L+GC+ +TD ++ ++ + L+ L + C IT
Sbjct: 144 IYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKIT 203
Query: 192 DDGLTYLVSGCQQIQ-------------------------FLDINKCSNIGDVGISNLSK 226
DDGL ++ C +Q FLDI NI D GI +++K
Sbjct: 204 DDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAK 263
Query: 227 ACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISD 271
C+ L++L + C ++ D ++++A C +LE L + G ++D
Sbjct: 264 -CNK-LESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTD 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
VTD+ + + + + L+L CK +TD M+ + L+SL+++ C K+TD GLL
Sbjct: 150 VTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQ 209
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALS------------------------NNCHKLQD 181
V + C LQ+L+L TD +S C+KL+
Sbjct: 210 VLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLES 269
Query: 182 LGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCY 241
L L C ITD G+ + + C ++FL + + D + LS+ CS+ L TL + C
Sbjct: 270 LNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDVNGCT 329
Query: 242 KVGDES 247
+ S
Sbjct: 330 GIKRRS 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 166 DGLLRALS-NNCHKLQDLGLQGCTSITDDGLTYLVSGCQ----QIQFLDINKCSNIGDVG 220
D LL ALS +++ + L+ + D L + + C +++L++N C I D G
Sbjct: 69 DRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNG 128
Query: 221 ISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSIKL 276
I ++ C LK + +V D I +L K C ++ L + GC+ ++D S++L
Sbjct: 129 IEAITSICPK-LKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQL 183
>AT5G01720.1 | Symbols: | F-box family protein (FBL3) |
chr5:267118-270391 REVERSE
Length = 665
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 45 TERKKLAARAGPHMLQKM-AQRFSRLIELDLSQSISR-SFYPGVTDSDLAVIAHGFKG-- 100
T R + +G LQ++ S +I LD + S+ + S + +V G K
Sbjct: 266 THRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIG 325
Query: 101 -----LRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQS 155
L+ +SL C +TD G+ S+ L L+ LD++ CRKL+ + +A C L S
Sbjct: 326 TLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVS 385
Query: 156 LHLAGCRLITDGLLRALSNNCHKLQDLGLQG------------------------CTSIT 191
L + C L++ + C L++L L C +IT
Sbjct: 386 LKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNIT 445
Query: 192 DDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSL 251
D GL+Y+ GC ++ LD+ + I DVGIS +++ C L+T+ + C + D+S+ SL
Sbjct: 446 DKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIH-LETINISYCQDITDKSLVSL 504
Query: 252 AKYCNNLETLIIGGCRDISDNSI 274
+K C+ L+T GC +I+ +
Sbjct: 505 SK-CSLLQTFESRGCPNITSQGL 526
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Query: 109 CKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGL 168
C ITD G+ IG G S+L+ LD+ +TD G+ +A+GC L++++++ C+ ITD
Sbjct: 441 CLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKS 500
Query: 169 LRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLS 225
L +LS C LQ +GC +IT GL + C+++ +D+ KC +I D G+ L+
Sbjct: 501 LVSLS-KCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALA 556
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 14/263 (5%)
Query: 11 LTDDELRSILSKLESDKDKEI--FGLVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSR 68
L +EL I+ L S ++ F L CK + +L+S R L + L ++ R+
Sbjct: 15 LLSEELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDY-LPRILTRYRN 73
Query: 69 LIELDLSQSISRSFYPGVTDSDLAVIA-HGFKGLRILSLQYCKGITDSGMRSIGCGLSSL 127
+LDL+ F P VTD L+V+ LR L L + +G+ + +L
Sbjct: 74 TTDLDLT------FCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNL 127
Query: 128 QSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGC 187
+D+S ++ D VAE + L+ L L C+++TD + ++ C KL + L+ C
Sbjct: 128 VEIDLSNATEMRDADAAVVAEA-RSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWC 186
Query: 188 TSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDES 247
+ D G+ L C+ I+ LD++ G + ++ K + L + C+ V D+S
Sbjct: 187 VGVGDLGVGLLAVKCKDIRTLDLSYLPITGKC-LHDILKLQHL--EELLLEGCFGVDDDS 243
Query: 248 ISSLAKYCNNLETLIIGGCRDIS 270
+ SL C +L+ L C++++
Sbjct: 244 LKSLRHDCKSLKKLDASSCQNLT 266
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 33/161 (20%)
Query: 67 SRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSI------ 120
S L ELDL +S+ G+TD ++ IA G L +++ YC+ ITD + S+
Sbjct: 457 SNLRELDLYRSV------GITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLL 510
Query: 121 ------GC------GLSS-------LQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGC 161
GC GL++ L +D+ C + D GLLA+A ++L+ ++++
Sbjct: 511 QTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDT 570
Query: 162 RLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC 202
+ GLL + C LQ++ + + + G+ + GC
Sbjct: 571 AVTEVGLLSLANIGC--LQNIAVVNSSGLRPSGVAAALLGC 609
>AT5G25350.1 | Symbols: EBF2 | EBF2 (EIN3-BINDING F BOX PROTEIN 2);
protein binding | chr5:8794842-8796882 REVERSE
Length = 623
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 9 EILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSR 68
++L ++ L IL +L S +++ V K WL L S+ + + +++ SR
Sbjct: 56 DVLPEECLFEILRRLPSGQERSACACVSKHWLNLLSSISRSEVNESSVQDVEEGEGFLSR 115
Query: 69 LIE---------------------LDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQ 107
+E L Q F VTD L +AHG LRI+SL
Sbjct: 116 SLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLW 175
Query: 108 YCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDG 167
++D G+ I ++ LD+S C +TD GL+A+AE C +L L + C + +
Sbjct: 176 NLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDLTIDSCSGVGNE 235
Query: 168 LLRALSNNCHKLQDLGLQGCTSITDDGLTYLVS 200
LRA++ C L+ + ++ C I D G+ +L++
Sbjct: 236 GLRAIARRCVNLRSISIRSCPRIGDQGVAFLLA 268
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGC--GLSSLQSLDVSFCRKLTDKGL 143
V+ LAVI H + L L +G+ + G +G GL L+SL V CR +TD GL
Sbjct: 284 VSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGL 343
Query: 144 LAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC- 202
AV GC DL+ + L C L++ L AL+ + L+ L L+ C I GL + C
Sbjct: 344 EAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCG 403
Query: 203 QQIQFLDINKCSNIGDVGISNLSKACSSCL-KTLKMLDCYKVGDESISSLAKYCNNLETL 261
+++ + C I D + + S ++L + C GD S++ L K+C+ L+ +
Sbjct: 404 SKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDV 463
Query: 262 IIGGCRDISDNSIK 275
+ G ++D ++
Sbjct: 464 ELCGLNGVTDAGVR 477
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 85 GVTDSDLAVI--AHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKG 142
GV + V+ A G K L+ LS+ C+G+TD G+ ++G G L+ + ++ C ++ KG
Sbjct: 309 GVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKG 368
Query: 143 LLAVAEGCKDLQSLHLAGCRLITD-GLLRALSNNCHKLQDLGLQGCTSITD--------- 192
L+A+A+ L+SL L C I GL+ L N KL+ L C I+D
Sbjct: 369 LVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPS 428
Query: 193 -------------------DGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLK 233
L +L C Q+Q +++ + + D G+ L ++ + L
Sbjct: 429 PSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLV 488
Query: 234 TLKMLDCYKVGDESISSLAK-YCNNLETLIIGGCRDISDNSI 274
+ + +C V D ++S+++ + LE+L + GC++I++ S+
Sbjct: 489 KVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASL 530
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 19/184 (10%)
Query: 84 PGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSS----LQSLDVSFCRKLT 139
PG D+ LA + L+ + L G+TD+G+R + L S L +++S C ++
Sbjct: 443 PGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVREL---LQSNNVGLVKVNLSECINVS 499
Query: 140 DKGL--LAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTY 197
D + ++V G + L+SL+L GC+ IT+ L A++ NC+ + DL + T ++D G+
Sbjct: 500 DNTVSAISVCHG-RTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISN-TLVSDHGIKA 557
Query: 198 LVSGCQQ--IQFLDINKCSNIGDVGISNLSKACSSCL-KTLKMLDCYKVGDESISSLAKY 254
L S +Q L I CS+I D SKAC L +TL L+ + G S S++
Sbjct: 558 LASSPNHLNLQVLSIGGCSSITDK-----SKACIQKLGRTLLGLNIQRCGRISSSTVDTL 612
Query: 255 CNNL 258
NL
Sbjct: 613 LENL 616
>AT5G51380.1 | Symbols: | F-box family protein |
chr5:20875945-20877779 FORWARD
Length = 479
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 31/267 (11%)
Query: 19 ILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQ-KMAQRFSRLIELDLSQS 77
IL KL +++++ LVCKRWL +Q + + +L ++ RF +L +DL
Sbjct: 75 ILEKLPESQNEDV-SLVCKRWLSVQGRRLRSMKVFDWEFLLSGRLVSRFPKLTSVDL--- 130
Query: 78 ISRSFYPGVTDSDL---AVIAHGFKGLRILSLQYCK------GITDSGMRSIGCGLSSLQ 128
++ F P L I+ L+L + + + D G+R +G G L
Sbjct: 131 VNACFNPSSNSGILLCHTSISFHVSTDSSLNLNFVEESLLDNEMVDKGLRVLGRGSFDLI 190
Query: 129 SLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQG-- 186
L V T+ GLL++AE C DLQ L L C +D LLR ++ C L+ L L G
Sbjct: 191 KLVVI---NATELGLLSLAEDCSDLQELELHKC---SDNLLRGIA-ACENLRGLRLVGSV 243
Query: 187 ----CTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYK 242
+S++D GLT L GC+++ L+++ C D GI + + C L+ L + D ++
Sbjct: 244 DGLYSSSVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGQCC-EVLEELSICD-HR 300
Query: 243 VGDESISSLAKYCNNLETLIIGGCRDI 269
+ D I++L+ Y +L+TL+I CR I
Sbjct: 301 MDDGWIAALS-YFESLKTLLISSCRKI 326
>AT1G80570.1 | Symbols: | F-box family protein (FBL14) |
chr1:30290828-30292231 FORWARD
Length = 467
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAG----PHMLQKMAQRF 66
L D + ILSKL + D+ L CKR+ L + +R L G L + +RF
Sbjct: 4 LPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLSLCRRF 63
Query: 67 SRL--IELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGL 124
L +E+ S +S+ V D L V+ L L+L +C ITD G+ +
Sbjct: 64 PNLSKVEIIYSGWMSK-LGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLS-SC 121
Query: 125 SSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGL 184
L SL ++F ++T G+L++A GCK L+ LHL C + L++L +
Sbjct: 122 PELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCI 181
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSN------IGDVGISNLSKACSSC--LKTLK 236
+ C +I + L L + +++ L +N + + K C L L
Sbjct: 182 KNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELS 241
Query: 237 MLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ +C ++ + + C NLE L + C +SD+ I
Sbjct: 242 LGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDI 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 69 LIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQ 128
L+EL L I PG LA + K L L L C G++DS + ++ S L+
Sbjct: 237 LVELSLGNCI---IAPG---RGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLR 290
Query: 129 SLDV------------SFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSN-- 174
S+ + + +LTD+ L A+A+ C L+S ++ +DG +L +
Sbjct: 291 SISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKIS----FSDGEFPSLFSFT 346
Query: 175 ---------NCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLS 225
C +++L L D G+ L S Q+++ L++ C + D G+ +S
Sbjct: 347 LQGIITLIQKC-PVRELSLDHVCVFNDMGMEALCSA-QKLEILELVHCQEVSDEGLILVS 404
Query: 226 KACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ S L LK+ C V D+ + L + LE L++ C +S +
Sbjct: 405 QFPS--LNVLKLSKCLGVTDDGMRPLVG-SHKLELLVVEDCPQVSRRGV 450
>AT1G80570.3 | Symbols: | F-box family protein (FBL14) |
chr1:30290828-30292231 FORWARD
Length = 467
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAG----PHMLQKMAQRF 66
L D + ILSKL + D+ L CKR+ L + +R L G L + +RF
Sbjct: 4 LPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLSLCRRF 63
Query: 67 SRL--IELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGL 124
L +E+ S +S+ V D L V+ L L+L +C ITD G+ +
Sbjct: 64 PNLSKVEIIYSGWMSK-LGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLS-SC 121
Query: 125 SSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGL 184
L SL ++F ++T G+L++A GCK L+ LHL C + L++L +
Sbjct: 122 PELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCI 181
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSN------IGDVGISNLSKACSSC--LKTLK 236
+ C +I + L L + +++ L +N + + K C L L
Sbjct: 182 KNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELS 241
Query: 237 MLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ +C ++ + + C NLE L + C +SD+ I
Sbjct: 242 LGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDI 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 69 LIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQ 128
L+EL L I PG LA + K L L L C G++DS + ++ S L+
Sbjct: 237 LVELSLGNCI---IAPG---RGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLR 290
Query: 129 SLDV------------SFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSN-- 174
S+ + + +LTD+ L A+A+ C L+S ++ +DG +L +
Sbjct: 291 SISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKIS----FSDGEFPSLFSFT 346
Query: 175 ---------NCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLS 225
C +++L L D G+ L S Q+++ L++ C + D G+ +S
Sbjct: 347 LQGIITLIQKC-PVRELSLDHVCVFNDMGMEALCSA-QKLEILELVHCQEVSDEGLILVS 404
Query: 226 KACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ S L LK+ C V D+ + L + LE L++ C +S +
Sbjct: 405 QFPS--LNVLKLSKCLGVTDDGMRPLVG-SHKLELLVVEDCPQVSRRGV 450
>AT1G80570.2 | Symbols: | F-box family protein (FBL14) |
chr1:30290661-30292231 FORWARD
Length = 480
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAG----PHMLQKMAQRF 66
L D + ILSKL + D+ L CKR+ L + +R L G L + +RF
Sbjct: 17 LPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLSLCRRF 76
Query: 67 SRL--IELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGL 124
L +E+ S +S+ V D L V+ L L+L +C ITD G+ +
Sbjct: 77 PNLSKVEIIYSGWMSK-LGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLS-SC 134
Query: 125 SSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGL 184
L SL ++F ++T G+L++A GCK L+ LHL C + L++L +
Sbjct: 135 PELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCI 194
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSN------IGDVGISNLSKACSSC--LKTLK 236
+ C +I + L L + +++ L +N + + K C L L
Sbjct: 195 KNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELS 254
Query: 237 MLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ +C ++ + + C NLE L + C +SD+ I
Sbjct: 255 LGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDI 292
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 69 LIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQ 128
L+EL L I PG LA + K L L L C G++DS + ++ S L+
Sbjct: 250 LVELSLGNCI---IAPG---RGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLR 303
Query: 129 SLDV------------SFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSN-- 174
S+ + + +LTD+ L A+A+ C L+S ++ +DG +L +
Sbjct: 304 SISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKIS----FSDGEFPSLFSFT 359
Query: 175 ---------NCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLS 225
C +++L L D G+ L S Q+++ L++ C + D G+ +S
Sbjct: 360 LQGIITLIQKC-PVRELSLDHVCVFNDMGMEALCSA-QKLEILELVHCQEVSDEGLILVS 417
Query: 226 KACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSI 274
+ S L LK+ C V D+ + L + LE L++ C +S +
Sbjct: 418 QFPS--LNVLKLSKCLGVTDDGMRPLVG-SHKLELLVVEDCPQVSRRGV 463
>AT2G44900.1 | Symbols: | armadillo/beta-catenin repeat family
protein / F-box family protein | chr2:18511719-18515762
REVERSE
Length = 930
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 40/257 (15%)
Query: 27 KDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQK--MAQRFSRLIELDLSQSISRSFYP 84
+D+ CK W L ++ + PH A SR + L + +
Sbjct: 65 RDRASLASTCKTWRCLGASSCLWTSLDLRPHKFDASMAASLASRCVNLHYLR------FR 118
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDV--SFCRKLTDKG 142
GV +D ++I + L +S YCK ITD+ + I +L+SL + FC ++T
Sbjct: 119 GVESAD-SLIHLKARNLIEVSGDYCKKITDATLSMIVARHEALESLQLGPDFCERITSDA 177
Query: 143 LLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC 202
+ AVA C L+ L L+G R +T + AL+ +C +L DLG C +I ++ L +VS
Sbjct: 178 IKAVAFCCPKLKKLRLSGIRDVTSEAIEALAKHCPQLNDLGFLDCLNIDEEALGKVVS-- 235
Query: 203 QQIQFLDINKCSNIG----------------------DVGISNLSK--ACSSCLKTLKML 238
+++L + SNI D+G + +S+ S LK L L
Sbjct: 236 --VRYLSVAGTSNIKWSIASNNWDKLPKLTGLDVSRTDIGPTAVSRFLTSSQSLKVLCAL 293
Query: 239 DCYKV-GDESISSLAKY 254
+C+ + DES+ S ++
Sbjct: 294 NCHVLEEDESLISYNRF 310
>AT3G60350.1 | Symbols: | armadillo/beta-catenin repeat family
protein / F-box family protein | chr3:22306806-22310596
REVERSE
Length = 928
Score = 69.3 bits (168), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 36/251 (14%)
Query: 27 KDKEIFGLVCKRWLRLQSTE--RKKLAARAGPHMLQKMAQRFSRLIELDLSQSISRSFYP 84
+D+ C+ W L ++ L RA L A +R ++L Q I +
Sbjct: 58 RDRASLASTCRTWRSLGASSFLWSSLDLRAHKFDLSMAASLATRCVDL---QKIR---FR 111
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDV--SFCRKLTDKG 142
GV +D A+I + L +S YC+ ITD+ + I +L+SL + FC ++T
Sbjct: 112 GVDSAD-AIIHLKARSLLEISGDYCRKITDATLSMIAARHEALESLQLGPDFCERITSDA 170
Query: 143 LLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVS-- 200
+ +A C L+ L ++G R ++ + +L+ +C +L DLG C +I ++ L +VS
Sbjct: 171 IRVIAFCCPKLKKLRVSGMRDVSSEAIESLAKHCPQLSDLGFLDCLNINEEALGKVVSLR 230
Query: 201 -----GCQQIQF---------------LDINKCSNIGDVGISNLSKACSSCLKTLKMLDC 240
G I++ LD+++ + I + +S L K+ S LK L L+C
Sbjct: 231 YLSVAGTSNIKWKVALENWEKLPKLIGLDVSR-TTIDHIAVSRLLKS-SQSLKVLCALNC 288
Query: 241 -YKVGDESISS 250
Y D+S SS
Sbjct: 289 PYLEEDKSYSS 299
>AT5G21900.1 | Symbols: | unknown protein | chr5:7238239-7240338
FORWARD
Length = 544
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 104 LSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRL 163
LSL C +TD M IG L++LD++ KLTDK L + EGC+ L+SL L R
Sbjct: 367 LSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRF 426
Query: 164 ITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISN 223
+ + L + L++L L + + L C+ +QFLD++ C + + +
Sbjct: 427 SDECIAAFLEVSGGSLRELCLNKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDDLRR 486
Query: 224 LSKACSSCLKTLKMLDCYKVGDESISSLAK 253
+ + CSS L++LK+ +V D + L++
Sbjct: 487 ILRCCSS-LQSLKLFGWTQVEDTYLEELSR 515
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 11/186 (5%)
Query: 100 GLRILSLQYC-KGITDSGM----RSIGCGLSSLQSLDV--SFCRKLTDKGLLAVAEGCKD 152
L++L L C + +TD + + G SL +L + +FC LTD LL +++
Sbjct: 225 SLKVLILDLCGRSMTDYTINQFFKRAPNGFPSLTTLSLQGAFC--LTDNALLLISKSSPL 282
Query: 153 LQSLHLAGCRLITDGLLRALSNNC-HKLQDLGLQGCTSI-TDDGLTYLVSGCQQIQFLDI 210
LQ ++L C L+T LR L++ L+ L + GC I G + + +++ +L +
Sbjct: 283 LQYINLTECSLLTYRALRILADKFGSTLRGLSIGGCQGIKKHKGFSSSLYKFEKLNYLSV 342
Query: 211 NKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDIS 270
++ D + + SS L L + +C +V DE + + +YC LE L I ++
Sbjct: 343 AGLVSVNDGVVRSFFMFRSSILTDLSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLT 402
Query: 271 DNSIKL 276
D S++
Sbjct: 403 DKSLEF 408
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 91 LAVIAHGF-KGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEG 149
L ++A F LR LS+ C+GI + L + L+ L+ GL++V +G
Sbjct: 299 LRILADKFGSTLRGLSIGGCQGI--KKHKGFSSSLYKFEKLNY-----LSVAGLVSVNDG 351
Query: 150 CKD---------LQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVS 200
L L LA C +TD + + C KL+ L + +TD L ++
Sbjct: 352 VVRSFFMFRSSILTDLSLANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITE 411
Query: 201 GCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLET 260
GC+ ++ L + + D I+ + L+ L + VG E+ SLAK C L+
Sbjct: 412 GCRYLKSLKLTS-NRFSDECIAAFLEVSGGSLRELCLNKVRDVGPETAFSLAKVCKMLQF 470
Query: 261 LIIGGCRDISDNSIK 275
L + CR + ++ ++
Sbjct: 471 LDLSWCRRLKEDDLR 485
>AT5G67140.1 | Symbols: | F-box family protein |
chr5:26794009-26795213 REVERSE
Length = 228
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 35 VCKRWLRL--QSTERKKLAARAGPHMLQKMAQRFSRLI----ELDLSQSISRSFYPGVTD 88
VCK+W + QS R++ + AG M R L ELD+S+S + +TD
Sbjct: 34 VCKKWRKAVNQSMARRETLSFAGWKMDDDSTSRLVHLAFNLKELDISRS---RWGCHITD 90
Query: 89 SDLAVIAHG--FKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDV--SFCRKLTDKGLL 144
+ L IA L +SL ITDSG+ + SSLQ L++ +F +TD+ L
Sbjct: 91 NGLYQIASARCVSNLNSVSLWGMTAITDSGVVQLISRTSSLQHLNIGGTF---ITDESLF 147
Query: 145 AVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYL-VSGCQ 203
A+AE C L+++ + CR +T+ L L N C KL+ + L G D + L +S
Sbjct: 148 AIAERCHQLKTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLTISPAL 207
Query: 204 QIQFLDI 210
QI+ +++
Sbjct: 208 QIKPMEL 214
>AT5G51370.1 | Symbols: | F-box family protein |
chr5:20872783-20873850 FORWARD
Length = 355
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 63/316 (19%)
Query: 19 ILSKLESDKDKEIFGLVCKRWLRLQSTE-RKKLAARAGPHMLQKMAQRFSRLIELDLSQS 77
I+ KL + ++ LVCKRWL LQ R + +++ RF L +DL +
Sbjct: 40 IIEKLPESQSNDV-SLVCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNA 98
Query: 78 I--------------SRSFYPGVTDSDLAVIAHGF-------KGLRILS-----LQYCKG 111
S SF+ S+ + +GLRILS L K
Sbjct: 99 CMNPRVNSGILFCHKSISFHLSSDSSNWEFLEENLLHSDVIDRGLRILSRESFDLLNLKV 158
Query: 112 ITDS--GMRSIGCGLSSLQSLDVSFCR----------------------------KLTDK 141
I S G+ S+ S LQ L++ C ++D
Sbjct: 159 INASELGLLSLAGDCSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDI 218
Query: 142 GLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSG 201
GL +A+GC+ L L L+GC DG ++A+ C L++L + C DDG +S
Sbjct: 219 GLTFLAQGCRSLVKLELSGCEGSFDG-IKAIGQCCEVLEELSI--CDHRMDDGWIAALSY 275
Query: 202 CQQIQFLDINKCSNI-GDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLET 260
+ ++ L I+ C I G L ++C + +++L++ C E I +L K C+
Sbjct: 276 FESLKILRISSCRKIDASPGPEKLLRSCPA-MESLQLKRCCLNDKEGIKALFKVCDGATE 334
Query: 261 LIIGGCRDISDNSIKL 276
+ I C +SD+ L
Sbjct: 335 VNIQDCWGLSDDCFSL 350
>AT2G06040.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 10 growth stages; CONTAINS
InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G21900.1); Has 3642 Blast hits to 1885 proteins
in 175 species: Archae - 0; Bacteria - 109; Metazoa -
2066; Fungi - 492; Plants - 697; Viruses - 0; Other
Eukaryotes - 278 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE
Length = 762
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 101 LRILSLQYCKGITDSGMRSIGCGLSSLQSLDV-SFCRKLTDKGLL----AVAEGCKDLQS 155
LR L + C+ I M+ I L + L+V S + KG A G + L+
Sbjct: 538 LRELYINECQNI---DMKHILAALKKFEKLEVLSLADLPSVKGRFLKEFVTARG-QTLKQ 593
Query: 156 LHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSN 215
L L R ++D ++ +S NC L L L +TD L YL +GCQ ++ L C N
Sbjct: 594 LILTNSRKLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIF--CRN 651
Query: 216 -IGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGCRDISDN 272
D ++ + LK L + + KVG + +LAK+ + L+ L I CR++S++
Sbjct: 652 PFSDEAVAAFVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWCREMSND 709
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCR-KLTDKGLL 144
++DS + VI+ L +L L +TDS + + G +L+ L FCR +D+ +
Sbjct: 602 LSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKL--IFCRNPFSDEAVA 659
Query: 145 AVAEGCK-DLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQ 203
A E L+ L L + + AL+ + KLQ L + C +++D L Y+V
Sbjct: 660 AFVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWCREMSNDLLGYIVDNSS 719
Query: 204 QIQFLDINKCSNIGDVGI 221
++ L + CS + DV +
Sbjct: 720 SLKVLKVFGCSQVTDVFV 737
>AT1G55590.1 | Symbols: | F-box family protein |
chr1:20769476-20771756 REVERSE
Length = 607
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Query: 89 SDLAVIAHGFKG----LRILSLQYCKGITDSGMRSIG-CGLSSLQSLDVSFCRKLTDKGL 143
SDLA H G L+ + L C IT ++ +G CG +L+ LD+ C+ ++D L
Sbjct: 351 SDLAF--HDVTGSSCSLQEVRLSTCPLITSEAVKKLGLCG--NLEVLDLGSCKSISDSCL 406
Query: 144 LAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSG-- 201
+V+ + L SL+LAG + G+L AL + + L L+GC ++D G++YL++
Sbjct: 407 NSVS-ALRKLTSLNLAGADVTDSGML-ALGKSDVPITQLSLRGCRRVSDRGISYLLNNEG 464
Query: 202 --CQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKY 254
+ + LD+ I D I ++ C + L L + C+ V D SI SLA +
Sbjct: 465 TISKTLSTLDLGHMPGISDRAIHTITHCCKA-LTELSIRSCFHVTDSSIESLATW 518
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 45/207 (21%)
Query: 66 FSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLS 125
+L++LDL + +P D+DL + GL+ +L +C+ +T + +
Sbjct: 243 LPQLVKLDLEDRPEKEPFP---DNDLT-----YTGLQ--ALGFCQQLTSLSL------VR 286
Query: 126 SLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQ 185
+ + +SF +++ D G+ ++E CK L+S+ L G ++D +L ++C L+ ++
Sbjct: 287 TCYNRKISF-KRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVR 345
Query: 186 GCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGD 245
G ++D + F D+ S CS L+ +++ C +
Sbjct: 346 GAFLLSD------------LAFHDVTGSS-------------CS--LQEVRLSTCPLITS 378
Query: 246 ESISSLAKYCNNLETLIIGGCRDISDN 272
E++ L C NLE L +G C+ ISD+
Sbjct: 379 EAVKKLG-LCGNLEVLDLGSCKSISDS 404
>AT5G51370.2 | Symbols: | F-box family protein |
chr5:20872783-20874192 FORWARD
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 63/316 (19%)
Query: 19 ILSKLESDKDKEIFGLVCKRWLRLQSTE-RKKLAARAGPHMLQKMAQRFSRLIELDLSQS 77
I+ KL + ++ LVCKRWL LQ R + +++ RF L +DL +
Sbjct: 40 IIEKLPESQSNDV-SLVCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNA 98
Query: 78 I--------------SRSFYPGVTDSDLAVIAHGF-------KGLRILS-----LQYCKG 111
S SF+ S+ + +GLRILS L K
Sbjct: 99 CMNPRVNSGILFCHKSISFHLSSDSSNWEFLEENLLHSDVIDRGLRILSRESFDLLNLKV 158
Query: 112 ITDS--GMRSIGCGLSSLQSLDVSFCR----------------------------KLTDK 141
I S G+ S+ S LQ L++ C ++D
Sbjct: 159 INASELGLLSLAGDCSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDI 218
Query: 142 GLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSG 201
GL +A+GC+ L L L+GC DG ++A+ C L++L + C DDG +S
Sbjct: 219 GLTFLAQGCRSLVKLELSGCEGSFDG-IKAIGQCCEVLEELSI--CDHRMDDGWIAALSY 275
Query: 202 CQQIQFLDINKCSNI-GDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLET 260
+ ++ L I+ C I G L ++C + +++L++ C E I +L K C+
Sbjct: 276 FESLKILRISSCRKIDASPGPEKLLRSCPA-MESLQLKRCCLNDKEGIKALFKVCDGATE 334
Query: 261 LIIGGCRDISDNSIKL 276
+ I C +SD+ L
Sbjct: 335 VNIQDCWGLSDDCFSL 350
>AT1G80630.1 | Symbols: | leucine-rich repeat family protein |
chr1:30308879-30310615 REVERSE
Length = 578
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLL 144
G T + + ++ L L+L+ ++D + +G L L++SFC KLT
Sbjct: 279 GFTFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFF 338
Query: 145 AVAEGC----------------------KDLQS----LHLAGCRLITDGLLRALSNNCHK 178
++ E C KD +S L+L+ + D L +S +C
Sbjct: 339 SIIERCVSLRCMIMVGTNFGVEEYTKDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPF 398
Query: 179 LQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKML 238
++ L + C IT DG+ + C +++ LDI++C+ I +G+ + L++L+
Sbjct: 399 IESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVVDFELP---KLESLRAC 455
Query: 239 DCYKVGDESISSLAKYCNNLETLIIGGCRDISDNSIK 275
+ + DE++ ++K C L L + GC ++S +K
Sbjct: 456 GTW-IDDEALDMISKKCRGLLHLDLQGCLNVSSRGVK 491
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 111 GITDSGMRSIGCGLSSLQSLDVSFCR----KLTDKGLLAVAEGCKDLQSLHLAGCRLITD 166
G +DS + SIG L+ LD+S+ +++D G++ ++ K L ++++G ITD
Sbjct: 119 GFSDSDLVSIGVNFPLLEKLDISYPNSSPSRVSDSGVIELSSNLKGLLKINISGNSFITD 178
Query: 167 GLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDIN 211
L ALS NC L+++ + C I+ D + +++ + ++ L IN
Sbjct: 179 KSLIALSQNCLLLREIIFRDCDFISSDCIKFVLRNSRNLESLAIN 223
>AT1G47056.1 | Symbols: VFB1 | VFB1 (VIER F-BOX PROTEINE 1);
ubiquitin-protein ligase | chr1:17276103-17277659
REVERSE
Length = 518
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 125 SSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCR--LITDGLLRALSNNCHKLQDL 182
SSL+SL + + T+ GL A+AE CK L+ LH+ G + LI D L A++ C +LQ+L
Sbjct: 283 SSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQEL 342
Query: 183 GLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYK 242
L G T L L + C ++ L + C GD +S ++ C + L+ L + +C
Sbjct: 343 VLIGVNPTTLS-LGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPA-LRKLCIKNC-P 399
Query: 243 VGDESISSLAKYCNNLETL-------IIGGCRD 268
+ D I +LA C L + ++GGC D
Sbjct: 400 ISDVGIENLANGCPGLTKVKIKKCKGVLGGCAD 432
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 60/308 (19%)
Query: 13 DDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSRLIEL 72
DE +++ + + +++ LVC+RW+ ++ R +L+ A ++ + FSR +
Sbjct: 44 PDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSV 103
Query: 73 -DLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIG---------- 121
LS R + D L I+ + L+ L L+ C+ +TD GM +
Sbjct: 104 TKLSLKCDRRSV-SIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFS 162
Query: 122 CG---------------LSSLQSLDVSFCRKLTD-------KGLLA-------------- 145
CG S+L+ L + R TD G+ A
Sbjct: 163 CGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNG 222
Query: 146 -----VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVS 200
V G K+L+SL L C D LL+ +S H + ++ L+ ++D L+ +S
Sbjct: 223 QCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLER-MQVSDVALSA-IS 280
Query: 201 GCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYK---VGDESISSLAKYCNN 257
C ++ L + K + G++ +++ C L+ L +D +K +GDE + ++AK+C+
Sbjct: 281 YCSSLESLHLVKTPECTNFGLAAIAEKCKR-LRKLH-IDGWKANLIGDEGLVAVAKFCSQ 338
Query: 258 LETLIIGG 265
L+ L++ G
Sbjct: 339 LQELVLIG 346
>AT2G17020.1 | Symbols: | F-box family protein (FBL10) |
chr2:7396559-7398787 REVERSE
Length = 656
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
VTD+ I H L S+ + +TD I SL + + C LTD +
Sbjct: 339 VTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRRCHLLTDHAIQK 398
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC-QQ 204
+A K L++L L GCR + D L A+S+ KL+ L L G I+D GL+YL G
Sbjct: 399 LASSLK-LENLDLRGCRNLRDETLTAVSH-LPKLKVLLLDG-ADISDTGLSYLKEGVLDS 455
Query: 205 IQFLDINKCSNIGDVGISNLSKACSS-CLKTLKMLDCYKVGDESISSLAKYCNNLETLII 263
+ L + C N+ D +S L S L+ L + + + D +I +LAK + L +
Sbjct: 456 LVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPNLTDAAIFALAKSGAPITKLQL 515
Query: 264 GGCRDISDNSI 274
CR I D S+
Sbjct: 516 RECRLIGDASV 526
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 84 PGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGL 143
P +TD I L +SL+ C +TD ++ + L L++LD+ CR L D+ L
Sbjct: 363 PKLTDLVFHDILATTLSLSHVSLRRCHLLTDHAIQKLASSLK-LENLDLRGCRNLRDETL 421
Query: 144 LAVA------------------------EGCKD-LQSLHLAGCRLITDGLLRALSNNCHK 178
AV+ EG D L SL + GCR +TD + L + K
Sbjct: 422 TAVSHLPKLKVLLLDGADISDTGLSYLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSK 481
Query: 179 L--QDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKA-------CS 229
L ++L L ++TD + L I L + +C IGD + L+
Sbjct: 482 LALRELDLSNLPNLTDAAIFALAKSGAPITKLQLRECRLIGDASVMALASTRVYEDECPG 541
Query: 230 SCLKTLKMLDCYKVGDESISSLAK-YCNNLETLIIGGC--RDISD 271
S L L + DC + S L K + L+ L I G RDI D
Sbjct: 542 SSLCLLDLYDCGGITQLSFKWLKKPFFPRLKWLGITGSVNRDIVD 586
>AT5G07670.1 | Symbols: | F-box family protein |
chr5:2430421-2432065 FORWARD
Length = 476
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 59/309 (19%)
Query: 10 ILTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQ-KMAQRFSR 68
+L D L ++ K+ + + K + LVCKRW RL + + ++ RF
Sbjct: 64 LLPDLILIRVIQKIPNSQRKNL-SLVCKRWFRLHGRLVRSFKVSDWEFLSSGRLISRFPN 122
Query: 69 LIELDLSQS--ISR------------SFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITD 114
L +DL IS SF GV + F +LS++ + +
Sbjct: 123 LETVDLVSGCLISPPNLGILVNHRIVSFTVGVGSYQ----SWSFFEENLLSVE----LVE 174
Query: 115 SGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGC------------- 161
G++++ G S+L+ L V+ +L GLL VAE C LQ L L C
Sbjct: 175 RGLKALAGGCSNLRKLVVTNTSEL---GLLNVAEECSRLQELELHKCSDSVLLGIGAFEN 231
Query: 162 ----RLI--TDGL---------LRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQ 206
RL+ DGL L L+ C +L L L GC DG+ + CQ ++
Sbjct: 232 LQILRLVGNVDGLYNSLVSDIGLMILAQGCKRLVKLELVGCEG-GFDGIKEIGECCQMLE 290
Query: 207 FLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGGC 266
L + C N + G + C + LKTLK++ C K+ ++ SL+ C LE L + C
Sbjct: 291 ELTV--CDNKMESGWLGGLRYCEN-LKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKC 347
Query: 267 RDISDNSIK 275
+ N++K
Sbjct: 348 QLRDKNTVK 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 86 VTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLA 145
V+D L ++A G K L L L C+G D G++ IG L+ L V C + G L
Sbjct: 249 VSDIGLMILAQGCKRLVKLELVGCEGGFD-GIKEIGECCQMLEELTV--CDNKMESGWLG 305
Query: 146 VAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQI 205
C++L++L L C+ I + +LS C L+ L L+ C + + L C+
Sbjct: 306 GLRYCENLKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAA 365
Query: 206 QFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNNLETLIIGG 265
+ + C + D I +L+ A +K L + C + + S+ + + LE L +
Sbjct: 366 REIVFQDCWGL-DNDIFSLAMAFGR-VKLLYLEGCSLLTTSGLESVILHWHELEHLKVVS 423
Query: 266 CRDISDNSI 274
C++I D+ +
Sbjct: 424 CKNIKDSEV 432
>AT1G15740.1 | Symbols: | leucine-rich repeat family protein |
chr1:5411509-5414544 FORWARD
Length = 585
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 34/247 (13%)
Query: 5 ICINEILTDDELRSILSKLESDKDKEIFG-LVCKRWLRLQSTERKKLAARAGPHMLQKMA 63
+C+ +I D + + S L D ++IF LV + L L+S E A
Sbjct: 65 LCVRKIQEDIDRYTKFSDLPRDISQQIFDELVYSQRLTLKSLE----------------A 108
Query: 64 QRFSRLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYC-KGITDSGMRSIGC 122
R + +L L + YPGV D + VI+ + +LS+ + ITDSG+ S+
Sbjct: 109 FRDCAIQDLYLGE------YPGVNDDWMDVISS--QSTSLLSVDFSGSDITDSGLVSLK- 159
Query: 123 GLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDL 182
G ++L+SL+ +FC +++++GL+ ++ G +L SL IT +RALSN + L+ L
Sbjct: 160 GCTNLESLNFNFCDQISNRGLVHLS-GLSNLTSLSFRRNAAITAQGMRALSNLVN-LKKL 217
Query: 183 GLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYK 242
L+ C I D GL +L +++ L+I C+ I D + LS + L++L++ C K
Sbjct: 218 DLEKCPGI-DGGLVHL-RALTKLESLNIKWCNCITDADMEPLSVLTN--LRSLQIC-CSK 272
Query: 243 VGDESIS 249
+ D IS
Sbjct: 273 ITDIGIS 279
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKIP2 (SKP1/ASK1 INTERACTING
PROTEIN 2); ubiquitin-protein ligase |
chr5:26831677-26833260 REVERSE
Length = 527
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 7/175 (4%)
Query: 85 GVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLL 144
G D L +IA+G L + L+ + ++D G+ +I S++++L + + ++ GL+
Sbjct: 249 GDWDKVLQMIANGKSSLSEIHLERLQ-VSDIGLSAIS-KCSNVETLHIVKTPECSNFGLI 306
Query: 145 AVAEGCKDLQSLHLAGCRL--ITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGC 202
VAE CK L+ LH+ G R I D L +++ +C LQ+L L G + T L + S C
Sbjct: 307 YVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNA-THMSLAAIASNC 365
Query: 203 QQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVGDESISSLAKYCNN 257
++++ L + IGD I+ +++ C + L+ + C V D I +LA C N
Sbjct: 366 EKLERLALCGSGTIGDTEIACIARKCGA-LRKFCIKGC-PVSDRGIEALAVGCPN 418
>AT3G50080.1 | Symbols: VFB2 | VFB2 (VIER F-BOX PROTEINE 2);
ubiquitin-protein ligase | chr3:18572788-18574356
FORWARD
Length = 522
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 64/310 (20%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKMA---QRFS 67
L DD L I L S D++ LV KRWL + R +L+ A +L + RF
Sbjct: 44 LPDDCLAHIFQFL-SAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFD 102
Query: 68 RLIELDLSQSISRSFYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSL 127
+ +L L + RSF ++D L +++ L + L+ C+ ITD GM S SL
Sbjct: 103 SVTKLAL-RCDRRSF--SLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSL 159
Query: 128 QSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITD---------------GLLRAL 172
+ L C KG+ A+ E CK L+ L L R + + L+ L
Sbjct: 160 RKLSCGSC-TFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLSLSASLRSVFLKEL 218
Query: 173 SN-----------------------NCHKLQDLGLQGCTSITDDGLTYL---------VS 200
N N ++ ++ G +S+T+ L L +S
Sbjct: 219 VNGQVFGSLVATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRLERLQVTDIGLFGIS 278
Query: 201 GCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKML--DCYKV---GDESISSLAKYC 255
C ++ L I K + ++G++++ + C K L+ L D ++V GD+ + S+AK+C
Sbjct: 279 KCSNLETLHIVKTPDCSNLGLASVVERC----KLLRKLHIDGWRVKRIGDQGLMSVAKHC 334
Query: 256 NNLETLIIGG 265
NL+ L++ G
Sbjct: 335 LNLQELVLIG 344
>AT5G57900.1 | Symbols: SKIP1 | SKIP1 (SKP1 INTERACTING PARTNER 1);
protein binding | chr5:23449916-23450915 REVERSE
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 87 TDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAV 146
+D L+ A L++L+++ +TD+ M I SL+ LD+S+C +++ L+ +
Sbjct: 100 SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMI 159
Query: 147 AEGCKDLQSL------------------HLAGCRLITDGLLRALSNNCHKLQDLGLQGCT 188
C +L+ L +L C D A+ + L+ L +Q +
Sbjct: 160 GRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQ-FS 218
Query: 189 SITDDGLTYLVSGCQQIQFLDINKCSNIGDVGI-SNLSKACSSCLKTLKMLDCYKVGDES 247
++ GL + GC ++++LD+ C ++ I SN+S+ LK +K D Y
Sbjct: 219 RLSVKGLASICEGCPKLEYLDLFGCVHLSSRDITSNVSRL--KWLKEVKKPDVYVPRSGD 276
Query: 248 ISSLAKY 254
++ +Y
Sbjct: 277 VAQTERY 283
>AT4G05460.1 | Symbols: | F-box family protein (FBL20) |
chr4:2761106-2762400 REVERSE
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 82 FYPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDK 141
+Y G D L IAH LR L L C ITD G L L+ L++S+C + +
Sbjct: 99 WYFGTVDL-LNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP-LEELELSYC-SFSVE 155
Query: 142 GLLAVAEGCKDLQSLHL-AGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVS 200
L V + C ++++L L + D A++ KL+ L L G ++D GL ++
Sbjct: 156 SLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMPKLRHLQLCG-NGLSDTGLNAILD 214
Query: 201 GCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLK 236
C ++ LD+ +C N+ VG +L K C +K ++
Sbjct: 215 NCSNLEHLDLRRCFNVNLVG--DLQKRCFESVKVVR 248
>AT4G03630.1 | Symbols: | root nodule development protein-related |
chr4:1608750-1610037 FORWARD
Length = 220
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 87 TDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVSFCRKLTDKGLLAV 146
TDS L IA LR L L C IT G+ + L L+ L++S+C + K L A+
Sbjct: 50 TDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMKLPLLEDLELSYCL-IKGKNLEAI 108
Query: 147 AEGCKDLQSLHL-------AGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLV 199
C L++L L G D L ++ +L+ L L G ++D GL +
Sbjct: 109 GFACLHLKTLKLNCQGFKFPGFTYDHDAL--GIAKRMPELRCLQLFG-NRVSDVGLNAIF 165
Query: 200 SGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLK 236
GC ++ LD+ +C NI VG +L K C +K L+
Sbjct: 166 DGCPHLEHLDLRQCFNINLVG--DLEKRCMERIKDLR 200
>AT4G08980.5 | Symbols: | F-box family protein (FBW2) |
chr4:5758993-5760108 FORWARD
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM-----AQR 65
L D L I S L + + VCK W R A GP+ Q++ + R
Sbjct: 13 LIPDALGLIFSHLPLQEVLTVVPRVCKAWNR----------AVTGPYCWQEIDIELWSNR 62
Query: 66 FS------RLIELDLSQSISRSFYPGVT----DSDLAVIAHGFKGLRILSLQYCKGITDS 115
F R++E+ + +S VT DS + IA L+ L + G+T+S
Sbjct: 63 FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNS 121
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL----QSLHLAGCRLIT--DGLL 169
G+ ++ LSSL LD+S+C K+ + + A+ + CK L +++H + D
Sbjct: 122 GVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEA 181
Query: 170 RALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNI 216
A++N KL+ L + ++ +G+ ++S C ++FL++ C ++
Sbjct: 182 YAIANTMPKLKRLEI-AYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
>AT4G08980.4 | Symbols: | F-box family protein (FBW2) |
chr4:5758993-5760108 FORWARD
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM-----AQR 65
L D L I S L + + VCK W R A GP+ Q++ + R
Sbjct: 13 LIPDALGLIFSHLPLQEVLTVVPRVCKAWNR----------AVTGPYCWQEIDIELWSNR 62
Query: 66 FS------RLIELDLSQSISRSFYPGVT----DSDLAVIAHGFKGLRILSLQYCKGITDS 115
F R++E+ + +S VT DS + IA L+ L + G+T+S
Sbjct: 63 FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNS 121
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL----QSLHLAGCRLIT--DGLL 169
G+ ++ LSSL LD+S+C K+ + + A+ + CK L +++H + D
Sbjct: 122 GVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEA 181
Query: 170 RALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNI 216
A++N KL+ L + ++ +G+ ++S C ++FL++ C ++
Sbjct: 182 YAIANTMPKLKRLEI-AYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
>AT4G08980.2 | Symbols: | F-box family protein (FBW2) |
chr4:5758993-5760108 FORWARD
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM-----AQR 65
L D L I S L + + VCK W R A GP+ Q++ + R
Sbjct: 13 LIPDALGLIFSHLPLQEVLTVVPRVCKAWNR----------AVTGPYCWQEIDIELWSNR 62
Query: 66 FS------RLIELDLSQSISRSFYPGVT----DSDLAVIAHGFKGLRILSLQYCKGITDS 115
F R++E+ + +S VT DS + IA L+ L + G+T+S
Sbjct: 63 FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNS 121
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL----QSLHLAGCRLIT--DGLL 169
G+ ++ LSSL LD+S+C K+ + + A+ + CK L +++H + D
Sbjct: 122 GVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEA 181
Query: 170 RALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNI 216
A++N KL+ L + ++ +G+ ++S C ++FL++ C ++
Sbjct: 182 YAIANTMPKLKRLEI-AYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
>AT4G08980.3 | Symbols: | F-box family protein (FBW2) |
chr4:5758993-5760108 FORWARD
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM-----AQR 65
L D L I S L + + VCK W R A GP+ Q++ + R
Sbjct: 13 LIPDALGLIFSHLPLQEVLTVVPRVCKAWNR----------AVTGPYCWQEIDIELWSNR 62
Query: 66 FS------RLIELDLSQSISRSFYPGVT----DSDLAVIAHGFKGLRILSLQYCKGITDS 115
F R++E+ + +S VT DS + IA L+ L + G+T+S
Sbjct: 63 FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNS 121
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL----QSLHLAGCRLIT--DGLL 169
G+ ++ LSSL LD+S+C K+ + + A+ + CK L +++H + D
Sbjct: 122 GVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEA 181
Query: 170 RALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNI 216
A++N KL+ L + ++ +G+ ++S C ++FL++ C ++
Sbjct: 182 YAIANTMPKLKRLEI-AYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
>AT4G08980.1 | Symbols: | F-box family protein (FBW2) |
chr4:5758993-5760108 FORWARD
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAARAGPHMLQKM-----AQR 65
L D L I S L + + VCK W R A GP+ Q++ + R
Sbjct: 13 LIPDALGLIFSHLPLQEVLTVVPRVCKAWNR----------AVTGPYCWQEIDIELWSNR 62
Query: 66 FS------RLIELDLSQSISRSFYPGVT----DSDLAVIAHGFKGLRILSLQYCKGITDS 115
F R++E+ + +S VT DS + IA L+ L + G+T+S
Sbjct: 63 FHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNS 121
Query: 116 GMRSIGCGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDL----QSLHLAGCRLIT--DGLL 169
G+ ++ LSSL LD+S+C K+ + + A+ + CK L +++H + D
Sbjct: 122 GVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEA 181
Query: 170 RALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNI 216
A++N KL+ L + ++ +G+ ++S C ++FL++ C ++
Sbjct: 182 YAIANTMPKLKRLEI-AYHRVSTEGVLKILSCCVFLEFLELRGCWDV 227
>AT4G33210.1 | Symbols: | F-box family protein (FBL15) |
chr4:16015971-16020697 REVERSE
Length = 942
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 11 LTDDELRSILSKLESDKDKEIFGLVCKRWLRLQSTERKKLAA------RAGPHMLQKMAQ 64
LTDD L + S L + D +VC++W R+ S R + M
Sbjct: 193 LTDDLLHMVFSFL-NHVDLCRSAMVCRQW-RVASAHEDFWRVLNFENIRISMEQFENMCS 250
Query: 65 RFSRLIELDLSQSISRSFYPGVTDSDLAV-IAHGFKGLRILSLQYCKG-ITDSGMRSIG- 121
R+ E+++ Y + LA+ A + L +L++ KG I++S +++G
Sbjct: 251 RYPNATEVNV--------YGAPAVNALAMKAATTLRNLEVLTIG--KGHISESFFQALGE 300
Query: 122 CGLSSLQSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQD 181
C + L+S+ VS + G + L+ L + CR++ LS C +L+
Sbjct: 301 CNM--LRSVTVS--DAILGNGAQEIHLSHDRLRELKITKCRVMR------LSIRCPQLRS 350
Query: 182 LGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCY 241
L L+ ++ + C +Q LDI C + D I + + +C L++L + +C
Sbjct: 351 LSLKR------SNMSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQ-LESLDVSNCS 403
Query: 242 KVGDESISSLAKYCNNLETLIIGGCRDISDNSIKL 276
V DE++ +A+ C NL L C +IS S+ L
Sbjct: 404 CVSDETLREIAQACANLHILNASYCPNISLESVHL 438
>AT4G07400.1 | Symbols: VFB3 | VFB3 (VIER F-BOX PROTEINE 3);
ubiquitin-protein ligase | chr4:4197847-4199511 REVERSE
Length = 554
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 91 LAVIAHGFKGLRILSLQYCKGITDSGMRSI------------------GCGLSSL----- 127
A + G KGLRIL + C G D ++ GL++L
Sbjct: 258 FAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLERIQMSDLGLTALSKCSG 317
Query: 128 -QSLDVSFCRKLTDKGLLAVAEGCKDLQSLHLAGCRL--ITDGLLRALSNNCHKLQDLGL 184
+ L + T+ GL VAE CK L+ LH+ G + I D L ++ C LQ+L L
Sbjct: 318 VEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVL 377
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCYKVG 244
G + T L +VS C ++ L + +GD + +++ C + L+ L + +C +
Sbjct: 378 IG-VNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLA-LRKLCIKNC-PIT 434
Query: 245 DESISSLAKYCNNLETLIIGGCRDIS 270
D+ I +L C NL + + CR ++
Sbjct: 435 DDGIKALGNGCPNLLKVKVKKCRGVT 460
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 67/290 (23%)
Query: 34 LVCKRWLRLQSTERKKLAARAGPHMLQKMAQRFSRLIELD--LSQSISRSFYPGVTDSDL 91
LVC+RWL ++ R +L+ +A ++ + F+R + + +S RS G+ D+
Sbjct: 99 LVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRFDSVTKLVLRSDRRSL--GICDNAF 156
Query: 92 AVIAHGFKGLRILSLQYCKGITDSGM-------RSI--------GCGLSSLQSLDVSFCR 136
+I+ + L L L+ C I+D G+ RS+ G G+ + +L ++ C
Sbjct: 157 VMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNAL-LNTCL 215
Query: 137 KLTD------KGLLAVAE------------------------------GCKDLQSLHLAG 160
L + +G+ A AE G K L+ L +
Sbjct: 216 GLEELSVKRLRGIGAGAELIGPGGAAGSLKVICLKELHNGQCFAPLLSGAKGLRILKIFR 275
Query: 161 CRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVG 220
C D + A+ + + + ++ L+ ++D GLT L S C ++ L + K + +VG
Sbjct: 276 CSGDWDRVFEAVRDKVNAIVEIHLER-IQMSDLGLTAL-SKCSGVEVLHLVKTPDCTNVG 333
Query: 221 ISNLSKACSSCLKTLKML--DCYK---VGDESISSLAKYCNNLETLIIGG 265
++ +++ C K L+ L D +K +GDE + +AKYC NL+ L++ G
Sbjct: 334 LALVAERC----KLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIG 379
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRH1 (GRR1-LIKE PROTEIN
1); auxin binding / protein binding / ubiquitin-protein
ligase | chr4:1405108-1407057 REVERSE
Length = 585
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 83 YPGVTDSDLAVIAHGFKGLRILS---------LQYCKGITDSGMRSIGCGLSSLQSLDVS 133
+P D D I +GL +S L +C T++ + +I +L+ +
Sbjct: 342 FPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLC 401
Query: 134 FCRKLT---------DKGLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGL 184
DKG A+AEGC+DL+ L ++G L++D + + + K++ L +
Sbjct: 402 VIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSG--LLSDKAFKYIGKHAKKVRMLSI 459
Query: 185 QGCTSITDDGLTYLVSGCQQIQFLDINKCSNIGDVGISNLSKACSSCLKTLKMLDCY 241
+D L +L+SGC+ ++ L+I C GD + + + +++L M C+
Sbjct: 460 -AFAGDSDLMLHHLLSGCESLKKLEIRDCP-FGDTALLEHAAKLET-MRSLWMSSCF 513
>AT2G36370.1 | Symbols: | ubiquitin-protein ligase |
chr2:15247894-15252800 FORWARD
Length = 898
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 83 YPGVTDSDLAVIAHGFKGLRILSLQYCKGITDSGMRSIGCGLSSLQSLDVS-FCRKLTDK 141
+ ++DS L + K L+ L+L YC G + ++S + +L+ L + R +T+
Sbjct: 679 FQEISDSALTSVLTSLKHLQELALSYCFG--EISLQSFKFSMPNLRKLRLERVTRWMTND 736
Query: 142 GLLAVAEGCKDLQSLHLAGCRLITDGLLRALSNNCHKLQDLGLQGCTSITDDGLTYLVSG 201
LL + + C +L L L GC +T +S + L L+ C SIT++G+ L G
Sbjct: 737 DLLVLTQSCPNLTELSLVGCLHLTSDCQPIISAGWPGMISLHLEECGSITENGVASLY-G 795
Query: 202 CQQIQ 206
C ++
Sbjct: 796 CIALE 800