Jatropha Genome Database

JcCB0198191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0198191.10 + phase: 0 
         (300 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110...   336   1e-92
AT5G50290.1 | Symbols:  | unknown protein | chr5:20461814-204638...   102   4e-22
AT3G17350.1 | Symbols:  | unknown protein | chr3:5934111-5935036...    99   2e-21
AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084...    95   7e-20
AT1G21240.1 | Symbols: WAK3 | WAK3 (wall associated kinase 3); k...    48   9e-06

>AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110
           FORWARD
          Length = 305

 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/259 (66%), Positives = 205/259 (79%), Gaps = 6/259 (2%)

Query: 42  QACKNSCGNIPIKYPFGTGLGCGDPRFQKYVTCD-DQEKLSLLTHTGCYPINNIDYTNQV 100
           QAC+ +CG IPIKYP GTG GCGDPRF +Y+TCD DQ+ L+L THTG YPI ++DY  Q 
Sbjct: 27  QACQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQE 86

Query: 101 IYISDPSMSTCSCTQPSKGFGLDWDAPFSFQDDTVFTLLDCSTTSSPIFRNSNNGS-IVP 159
           IY++DPSMSTC+CT+PS GFGLDWDAPFSF DDTVFTLLDCS   SP+F   +NGS  V 
Sbjct: 87  IYVTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFTLLDCSVDESPVFTPLSNGSGRVS 146

Query: 160 QCDRTGAPICSFLYS-CQAISRLSLPISTCCVYTPVDLGPAFEMDLQKLQCSSYSGFYSF 218
            CDR  + IC+FLYS C+AIS ++L +STCCVY P+DLGP+FEMDL KL+CSSYSGFY+ 
Sbjct: 147 LCDRQSSSICTFLYSNCRAISLINLQVSTCCVYVPLDLGPSFEMDLNKLKCSSYSGFYNL 206

Query: 219 N-GQEDNPENWKYGIALKYKFNVYNDYPSSCANCERSNGVCGYGGVYNSFVCNCPNGFNT 277
             GQE +PENW YGIALKYKFNV+++YP  C +CERSNG CG+    +SFVCNCP G NT
Sbjct: 207 GPGQESHPENWNYGIALKYKFNVFDEYPGVCGSCERSNGACGFNTQSSSFVCNCPGGINT 266

Query: 278 TSDCFFGGSYSLGSTLLPW 296
           TSDCFF   Y+  S L+PW
Sbjct: 267 TSDCFF--LYNSASILVPW 283


>AT5G50290.1 | Symbols:  | unknown protein | chr5:20461814-20463896
           FORWARD
          Length = 303

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 127/276 (46%), Gaps = 27/276 (9%)

Query: 23  ITLLSFISFIITLPSPISSQACKNSCGNIPIKYPFGTGLGCGDPRFQKYVTCDDQEKLSL 82
           + +L  I   +TL       AC++ CGNI + YPFG   GCG P ++  + C + + L  
Sbjct: 1   MKILILILSFVTLFEICVVDACRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMN-DVLMF 59

Query: 83  LTHTGCYPINNIDYTNQVIYISDPSMSTC-SCTQPSKGFGL---DWDAP-FSFQDDTVFT 137
              +G Y + +IDY  Q I + DP MS C +     KG G    DW  P F+   D VF 
Sbjct: 60  HISSGSYRVLDIDYAYQSITLHDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFM 119

Query: 138 LLDCSTTSSPIFRNSNNGSIVPQCDRTGAPICSFLYSCQAISRLSL--PISTCCVYTPVD 195
           L+ CS   SPIF+      +   C       C    SC A   +    P        P+ 
Sbjct: 120 LIGCS-PKSPIFQGFPEKKV--PCRNISGMSCEEYMSCPAWDMVGYRQPGIHSGSGPPMC 176

Query: 196 LGPAFE----MDLQKLQCSSYSGFYSFNGQE-DNPENWKYGIALKYKFNVYNDYPSSCAN 250
            G  FE    ++L KL+C  YS  Y+    +   P +W YGI +KY+    + +   C  
Sbjct: 177 CGVGFESVKAINLSKLECEGYSSAYNLAPLKLRGPSDWAYGIRVKYELQGSDAF---CRA 233

Query: 251 CERSNGVCGY-----GGVYNSFVCNCPNGFNTTSDC 281
           C  ++G CGY     GG+ +  VC C N  N+T++C
Sbjct: 234 CVATSGTCGYEPADGGGLRH--VCMCDN-HNSTTNC 266


>AT3G17350.1 | Symbols:  | unknown protein | chr3:5934111-5935036
           FORWARD
          Length = 278

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 110/258 (42%), Gaps = 32/258 (12%)

Query: 40  SSQACKNSCGNIPIKYPFGTGLGCGDPRFQKYVTCDDQEKLSLLTHTGCYPINNIDYTNQ 99
           ++ +C+  CGNIPI YPFG   GCG P+++    C     L   T +G Y + +IDY  +
Sbjct: 27  AATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNC--STDLYFTTPSGSYKVQSIDYEKK 84

Query: 100 VIYISDPSMSTCSCTQPSKGFGLD--WDAPFSFQDDTVFTLLDCSTTSSPIFRNSNNGSI 157
            + I DP+MSTCS  QP   F +    +       DTVF L +CS   SP+     N   
Sbjct: 85  TMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFALFNCS-NDSPVHNRYRN--- 140

Query: 158 VPQCDRTGAPICSFLYSCQAISRL-----------SLPISTCCVYTPVDLGPAFEMDLQK 206
              C       C  LYS     R+           ++  +  C +T  D      M++  
Sbjct: 141 --LCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNI-- 196

Query: 207 LQCSSYSGFYSFNGQED--NPENWKYGIALKYKFNVYNDYPSSCANCERSNGVCGYGGVY 264
           L CS Y+     NG+     P +W YGI L Y           C  C +S G CG+    
Sbjct: 197 LDCSHYTTVID-NGKMRGVGPLDWSYGIELSYSVT-----EIGCDRCRKSGGTCGFDAET 250

Query: 265 NSFVCNCPNGFNT-TSDC 281
             F+C C    N  T +C
Sbjct: 251 EIFLCQCSGSNNNPTREC 268


>AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084
           FORWARD
          Length = 329

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 125/274 (45%), Gaps = 24/274 (8%)

Query: 20  HSYITLLSFISFIITLPSPISSQA--CKNSCGNIPIKYPFGTGLGCGDPRFQKYVTCDDQ 77
           HSYI   S +  I+   S  SSQ+  C++SCGNIPI YPF    GCG P ++  + C D 
Sbjct: 5   HSYIIFFSLLMTILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDN 64

Query: 78  E-KLSLLTHTGCYPINNIDYTNQVIYISDPSMSTCSCT---QPSKGFGLDWDAPFSFQDD 133
           + KL L T +G YP+ +I Y++  + +SDP M  C      +P++ F +D    F+    
Sbjct: 65  DTKLELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQ 124

Query: 134 TVFTLLDCSTTSSPIFRNSNNGSIVPQCDRTGAPICSFLYSCQAISRLSLPIS---TCCV 190
             +   +C+T    +          P  DR  +   S  Y C+ +      +    +CC 
Sbjct: 125 NDYLFFNCNTDKVIVEPKPLFCERFP--DRCDSSCDSSSYLCRHLPECGSALGSRVSCCS 182

Query: 191 YTPVDLGPAFEMDLQKLQCSSYSGFY-SFNGQEDNPENW--KYGIALKYKFNVYNDYPSS 247
           Y P        + L    C++Y+  Y    G E+ P +   +YGI + Y+F V       
Sbjct: 183 YYP---KATQSLRLMLQDCATYTSVYWRSTGVENAPYDQFPEYGIRVDYEFPV----TMK 235

Query: 248 CANCE---RSNGVCGYGGVYNSFVCNCPNGFNTT 278
           C  C+   +  GVCG+      F+C C  G  TT
Sbjct: 236 CLLCQETTKGGGVCGFNTRTRDFLCLCKQGNVTT 269


>AT1G21240.1 | Symbols: WAK3 | WAK3 (wall associated kinase 3);
           kinase/ protein serine/threonine kinase |
           chr1:7434303-7436702 FORWARD
          Length = 741

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 23  ITLLSFISFIITLPSPISSQACKNSCGNIPIKYPFGTGLGC---GDPRFQKYVTCDDQEK 79
           I  L++   +     P   + CK  CGN+ I+YPFG   GC   GD  F   +TC  +EK
Sbjct: 12  IFFLAYTQLVKGQHQP--REDCKLKCGNVTIEYPFGISTGCYYPGDDNFN--LTCVVEEK 67

Query: 80  LSLLTHTGCYPINNIDYTNQVIYISDPSMSTCSCTQPSKGFGLDWD--APFSFQDDTVFT 137
           L L    G   + NI ++  V  + +           + G  L +   + FS   +  FT
Sbjct: 68  LLLF---GIIQVTNISHSGHVSVLFERFSECYEQKNETNGTALGYQLGSSFSLSSNNKFT 124

Query: 138 LLDCSTTS 145
           L+ C+  S
Sbjct: 125 LVGCNALS 132