Jatropha Genome Database

JcCB0194971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0194971.10 - phase: 0 /pseudo
         (175 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38400.1 | Symbols: AGT3 | AGT3 (ALANINE:GLYOXYLATE AMINOTRAN...   230   3e-61
AT3G08860.1 | Symbols:  | alanine--glyoxylate aminotransferase, ...   209   7e-55
AT4G39660.1 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE AMINOTRAN...   192   8e-50
AT5G46180.1 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid...    47   6e-06

>AT2G38400.1 | Symbols: AGT3 | AGT3 (ALANINE:GLYOXYLATE
           AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr2:16083779-16085974 FORWARD
          Length = 477

 Score =  230 bits (587), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 106/158 (67%), Positives = 128/158 (81%), Gaps = 1/158 (0%)

Query: 1   MQRFVAKRLLSGRSSLSIHRCFSQLAQN-EASVLDNDALIPKMPPFDYSPPPYTGPSSEE 59
           MQRF AKR +   S     RC S  +Q   ASV D+D    ++PPF Y+PPPYTGPS++ 
Sbjct: 1   MQRFAAKRSVQNISVSLWRRCISSTSQAATASVKDSDEFQARLPPFAYTPPPYTGPSADV 60

Query: 60  IMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPDIID 119
           I++KRKEFLSPS+F  Y+KPLN+VDGKMQYLFDE+GRRYLDAF GIA V CGHCHPD+++
Sbjct: 61  ILSKRKEFLSPSMFCLYRKPLNIVDGKMQYLFDESGRRYLDAFAGIAVVNCGHCHPDVVE 120

Query: 120 SIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
            ++NQIKRLQH TVLYLNHAIADF+EALASK+PG+LKV
Sbjct: 121 PVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKV 158


>AT3G08860.1 | Symbols:  | alanine--glyoxylate aminotransferase,
           putative / beta-alanine-pyruvate aminotransferase,
           putative / AGT, putative | chr3:2696754-2699087 REVERSE
          Length = 481

 Score =  209 bits (532), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 96/161 (59%), Positives = 123/161 (76%), Gaps = 4/161 (2%)

Query: 1   MQRFVAKRLLSGRSS--LSIHRCFSQLAQNEASV--LDNDALIPKMPPFDYSPPPYTGPS 56
           M++  A   L  R++  L  H      AQ  +SV   + +  +PKMPPF+YSPPPY GPS
Sbjct: 1   MRKLTAVNSLLKRNNYLLPRHGSSQTAAQRTSSVRETETETKLPKMPPFNYSPPPYDGPS 60

Query: 57  SEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPD 116
           + EI+ KR+EFLSP+LFHFY  PLN+V+ KMQY+FDENGRRYLDAFGGIATV CGHCHP+
Sbjct: 61  TAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYLDAFGGIATVSCGHCHPE 120

Query: 117 IIDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           +++S+V Q+K + HST+LYLNH I+DFAEAL S +PG+LKV
Sbjct: 121 VVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKV 161


>AT4G39660.1 | Symbols: AGT2 | AGT2 (ALANINE:GLYOXYLATE
           AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/
           catalytic/ pyridoxal phosphate binding / transaminase |
           chr4:18406797-18409262 FORWARD
          Length = 476

 Score =  192 bits (488), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 102/118 (86%)

Query: 40  PKMPPFDYSPPPYTGPSSEEIMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYL 99
           P +PPF + P PY GPS++E++ KRK+FL PSLFH+Y+KPLN+V+GKMQYL+DE+GRRYL
Sbjct: 39  PHIPPFVHQPRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYL 98

Query: 100 DAFGGIATVCCGHCHPDIIDSIVNQIKRLQHSTVLYLNHAIADFAEALASKMPGNLKV 157
           DAF GI TV CGHCHPDI+++I  Q K LQH+T +YL+HAI DFAEALA+KMPGNLKV
Sbjct: 99  DAFAGIVTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKV 156


>AT5G46180.1 | Symbols: DELTA-OAT | delta-OAT; ornithine-oxo-acid
           transaminase | chr5:18718766-18721271 REVERSE
          Length = 475

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 60  IMTKRKEFLSPSLFHFYKKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPDIID 119
           +M    EF   S  +++  P+         ++D  G+RY+D     + V  GHCHP I+ 
Sbjct: 43  LMELESEF---SAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCHPKIMK 99

Query: 120 SIVNQIKRLQHSTVLYLNHAIADFAEALAS 149
           ++  Q+++L  S+  + N     FAE L +
Sbjct: 100 ALQEQVEKLTLSSRAFYNDKFPVFAERLTN 129