Jatropha Genome Database
- JcCB0190821.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0190821.10 - phase: 0 /pseudo
(236 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42740.1 | Symbols: | glucose-6-phosphate isomerase, cytosol... 347 4e-96
AT4G24620.2 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERAS... 57 8e-09
AT4G24620.1 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERAS... 57 8e-09
>AT5G42740.1 | Symbols: | glucose-6-phosphate isomerase, cytosolic
(PGIC) | chr5:17136080-17140622 FORWARD
Length = 560
Score = 347 bits (890), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 189/206 (91%)
Query: 2 ASAALICDTHPWKTLKAHVEDIKKTHLRDLMSDSERCKSMVVEFDGIIVDFSRQQATVDT 61
+S ALICDT WK LK HVEDIKKTHLRDLMSD+ RC+SM++EFDG+++D+SRQ+ATV+T
Sbjct: 3 SSTALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVET 62
Query: 62 VDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDAVIKSDGKNVVPDVWN 121
+DKL NLA+A+ L EKI MFNGE IN+TENRSVLHVALRAP+DAVIK+DG NVVP+VWN
Sbjct: 63 MDKLLNLAKASQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGMNVVPEVWN 122
Query: 122 VLDKIKDFSERLRNGSWVGATGKQLTDVIAIGIGGSFLGPLFVHTALQTDPEASKFAKGR 181
VLDKIK+FS+++R+GSWVGATGK L DVIAIGIGGSFLGPLFVHTALQTDPEA + AKGR
Sbjct: 123 VLDKIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGR 182
Query: 182 QLRFLANVDPIDVARNIAGLHPETTL 207
QLRFLAN+DP+DVARNI+GL+PETTL
Sbjct: 183 QLRFLANIDPVDVARNISGLNPETTL 208
>AT4G24620.2 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE
1); glucose-6-phosphate isomerase |
chr4:12709097-12712610 REVERSE
Length = 570
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 47 GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDA 106
G+ +D SR T + V ++ +AA + + + G N E R V H LR + A
Sbjct: 89 GLYLDISRVGFTDEFVAEMEPRFQAAF--KAMEDLEKGSIANPDEGRMVGHYWLRNSKLA 146
Query: 107 VIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGPLFV 164
K K ++ N LD I FS+ + +G + + T ++++GIGGS LGP FV
Sbjct: 147 P-KPTLKTLIE---NTLDSICAFSDDIISGKIKPPSSPEGRFTQILSVGIGGSALGPQFV 202
Query: 165 HTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPE 204
AL D K +RF+ N DP + IA L PE
Sbjct: 203 AEALAPDNPPLK------IRFIDNTDPAGIDHQIAQLGPE 236
>AT4G24620.1 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE
1); glucose-6-phosphate isomerase |
chr4:12708972-12712610 REVERSE
Length = 613
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 47 GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDA 106
G+ +D SR T + V ++ +AA + + + G N E R V H LR + A
Sbjct: 89 GLYLDISRVGFTDEFVAEMEPRFQAAF--KAMEDLEKGSIANPDEGRMVGHYWLRNSKLA 146
Query: 107 VIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGPLFV 164
K K ++ N LD I FS+ + +G + + T ++++GIGGS LGP FV
Sbjct: 147 P-KPTLKTLIE---NTLDSICAFSDDIISGKIKPPSSPEGRFTQILSVGIGGSALGPQFV 202
Query: 165 HTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPE 204
AL D K +RF+ N DP + IA L PE
Sbjct: 203 AEALAPDNPPLK------IRFIDNTDPAGIDHQIAQLGPE 236