Jatropha Genome Database
- JcCB0188331.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0188331.10 + phase: 2 /pseudo/partial
(139 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase... 179 4e-46
AT5G12150.2 | Symbols: | pleckstrin homology (PH) domain-contai... 146 5e-36
AT5G12150.1 | Symbols: | pleckstrin homology (PH) domain-contai... 145 6e-36
AT5G19390.3 | Symbols: | pleckstrin homology (PH) domain-contai... 142 4e-35
AT5G19390.4 | Symbols: | pleckstrin homology (PH) domain-contai... 142 5e-35
AT5G19390.2 | Symbols: | pleckstrin homology (PH) domain-contai... 142 6e-35
AT5G19390.1 | Symbols: | pleckstrin homology (PH) domain-contai... 142 6e-35
>AT4G24580.1 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase
activator/ Rho GTPase binding / phosphoinositide binding
| chr4:12687879-12694248 REVERSE
Length = 939
Score = 179 bits (455), Expect = 4e-46, Method: Composition-based stats.
Identities = 79/100 (79%), Positives = 90/100 (90%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
GV++EGILRQAA VDDV+HRIREYE+GK EF+ +EDAH+I DC+KYFLRELPSSPVPASC
Sbjct: 236 GVRIEGILRQAADVDDVEHRIREYEKGKNEFSPEEDAHIIADCLKYFLRELPSSPVPASC 295
Query: 81 CNALLQSFRTDRANRVNNMRVAILENFPEPNRRLLQRYLM 120
CNALL++ RTDR NRVN MR AI E+FPEPNRRLLQR LM
Sbjct: 296 CNALLEACRTDRGNRVNAMRAAICESFPEPNRRLLQRILM 335
>AT5G12150.2 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:3924632-3930100 REVERSE
Length = 772
Score = 146 bits (368), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G KVEGILRQ+A V++V+ R++EYEQGKTEF+ +ED HV+GDCVK+ LR+LPSSPVPASC
Sbjct: 195 GTKVEGILRQSADVEEVERRVQEYEQGKTEFSPEEDPHVVGDCVKHVLRQLPSSPVPASC 254
Query: 81 CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
C ALL++++ D+ RVN++R AI+E FPEPNRRLL R L
Sbjct: 255 CTALLEAYKIDQNEARVNSLRSAIIETFPEPNRRLLLRML 294
>AT5G12150.1 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:3924393-3930100 REVERSE
Length = 827
Score = 145 bits (367), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G KVEGILRQ+A V++V+ R++EYEQGKTEF+ +ED HV+GDCVK+ LR+LPSSPVPASC
Sbjct: 195 GTKVEGILRQSADVEEVERRVQEYEQGKTEFSPEEDPHVVGDCVKHVLRQLPSSPVPASC 254
Query: 81 CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
C ALL++++ D+ RVN++R AI+E FPEPNRRLL R L
Sbjct: 255 CTALLEAYKIDQNEARVNSLRSAIIETFPEPNRRLLLRML 294
>AT5G19390.3 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:6531906-6538069 FORWARD
Length = 822
Score = 142 bits (359), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G K+EGILRQ+A V++V+ R++EYEQGKTEF DED HV+GDC+K+ LRELPSSPV ASC
Sbjct: 190 GTKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASC 249
Query: 81 CNALLQSFRTD-RANRVNNMRVAILENFPEPNRRLLQRYL 119
C ALL+++R + + R++++R AI E FPEPNRRLLQR L
Sbjct: 250 CTALLEAYRIESKEARISSLRSAIAETFPEPNRRLLQRIL 289
>AT5G19390.4 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:6531906-6537143 FORWARD
Length = 714
Score = 142 bits (359), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G K+EGILRQ+A V++V+ R++EYEQGKTEF DED HV+GDC+K+ LRELPSSPV ASC
Sbjct: 190 GTKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASC 249
Query: 81 CNALLQSFRTD-RANRVNNMRVAILENFPEPNRRLLQRYL 119
C ALL+++R + + R++++R AI E FPEPNRRLLQR L
Sbjct: 250 CTALLEAYRIESKEARISSLRSAIAETFPEPNRRLLQRIL 289
>AT5G19390.2 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:6531906-6538206 FORWARD
Length = 870
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G K+EGILRQ+A V++V+ R++EYEQGKTEF DED HV+GDC+K+ LRELPSSPV ASC
Sbjct: 190 GTKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASC 249
Query: 81 CNALLQSFRTD-RANRVNNMRVAILENFPEPNRRLLQRYL 119
C ALL+++R + + R++++R AI E FPEPNRRLLQR L
Sbjct: 250 CTALLEAYRIESKEARISSLRSAIAETFPEPNRRLLQRIL 289
>AT5G19390.1 | Symbols: | pleckstrin homology (PH)
domain-containing protein / RhoGAP domain-containing
protein | chr5:6531906-6538206 FORWARD
Length = 870
Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
Query: 21 GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
G K+EGILRQ+A V++V+ R++EYEQGKTEF DED HV+GDC+K+ LRELPSSPV ASC
Sbjct: 190 GTKIEGILRQSADVEEVERRVQEYEQGKTEFTFDEDPHVVGDCIKHVLRELPSSPVSASC 249
Query: 81 CNALLQSFRTD-RANRVNNMRVAILENFPEPNRRLLQRYL 119
C ALL+++R + + R++++R AI E FPEPNRRLLQR L
Sbjct: 250 CTALLEAYRIESKEARISSLRSAIAETFPEPNRRLLQRIL 289