Jatropha Genome Database
- JcCB0186361.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0186361.10 - phase: 0
(405 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63090.1 | Symbols: | ubiquitin thiolesterase | chr3:2331361... 551 e-157
AT5G48040.1 | Symbols: | ubiquitin thiolesterase | chr5:1947046... 180 1e-45
AT2G31290.2 | Symbols: | ubiquitin thiolesterase | chr2:1334415... 177 8e-45
AT2G31290.1 | Symbols: | ubiquitin thiolesterase | chr2:1334415... 177 8e-45
AT4G01037.1 | Symbols: | ubiquitin thiolesterase | chr4:451444-... 175 5e-44
AT3G58520.1 | Symbols: | ubiquitin thiolesterase | chr3:2164392... 170 1e-42
AT3G58520.2 | Symbols: | ubiquitin thiolesterase | chr3:2164392... 161 6e-40
AT5G21970.1 | Symbols: | ubiquitin thiolesterase | chr5:7262071... 155 3e-38
AT1G71850.1 | Symbols: | ubiquitin thiolesterase | chr1:2702487... 143 2e-34
AT4G24320.1 | Symbols: | ubiquitin thiolesterase | chr4:1260229... 136 2e-32
AT1G79120.1 | Symbols: | ubiquitin thiolesterase | chr1:2976731... 134 1e-31
AT5G45790.1 | Symbols: | ubiquitin thiolesterase | chr5:1857247... 132 3e-31
AT4G33495.1 | Symbols: RPD1 | RPD1 (ROOT PRIMORDIUM DEFECTIVE 1)... 132 5e-31
AT1G06440.1 | Symbols: | ubiquitin thiolesterase | chr1:1963733... 132 5e-31
AT4G08940.1 | Symbols: | ubiquitin thiolesterase | chr4:5730986... 107 2e-23
AT2G39120.1 | Symbols: | ubiquitin thiolesterase | chr2:1632179... 105 4e-23
AT5G62990.1 | Symbols: emb1692 | emb1692 (embryo defective 1692)... 98 9e-21
>AT3G63090.1 | Symbols: | ubiquitin thiolesterase |
chr3:23313617-23314831 FORWARD
Length = 404
Score = 551 bits (1420), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/367 (73%), Positives = 306/367 (83%)
Query: 28 FNIQIKYISSLKVVWRKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXX 87
IQI++ISSLKVVW+KD +LD AIE+DKRYK+CARVVKEVLNEPGQVIP
Sbjct: 24 LGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRER 83
Query: 88 XXXNIKVKTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIV 147
K K+F+ NP LF+ YYDRIKPKS+ V FLR + RLR FL+EE+RI ENE L+V
Sbjct: 84 LRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLV 143
Query: 148 SRLCKLLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLEL 207
S+LC+LLMMAKDKV+SADKLVHVKR+FG PNDFL+ LV KYPNYFRLTG P EGKSFLEL
Sbjct: 144 SKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLEL 203
Query: 208 VEWNSEFAKSFIEQRAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISP 267
V WN +FAKS IE RAE+E+ TG+R+RPN+N KLP GFFLRKEMREW RDWLE DYISP
Sbjct: 204 VSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISP 263
Query: 268 YEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHS 327
YEDVSHLDQ+S EMEKRTVGV HELLSLSL KRVPVP LGKF +E+RFSNAFSSVFTRHS
Sbjct: 264 YEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHS 323
Query: 328 GIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQLKTQKEVL 387
GIFY+SLKGGIKTA+LREAYKD EL+D+DPL IKDKF+ LLEEGWQER D+LK Q+E +
Sbjct: 324 GIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQV 383
Query: 388 KNDMEMM 394
+ D EMM
Sbjct: 384 QKDREMM 390
>AT5G48040.1 | Symbols: | ubiquitin thiolesterase |
chr5:19470461-19471729 FORWARD
Length = 422
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 179/350 (51%), Gaps = 13/350 (3%)
Query: 35 ISSLKVVWRKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXX--XNI 92
+ ++K+ W KDR+LD + ++K + +V + P +P +
Sbjct: 32 LVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQEL 91
Query: 93 KVKTFINQNPGLF--DTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRL 150
K+ FI + P +F Y+D SV + + EE + NE ++ RL
Sbjct: 92 KLSAFIRRYPNIFVEHCYWD---SAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRL 148
Query: 151 CKLLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEW 210
CKLLM+ ++ LS + H++ + GLP D+ +L+ K+P+ F L + L+L+ W
Sbjct: 149 CKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-LKLIHW 207
Query: 211 NSEFAKSFIEQRAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISPYED 270
+ A S ++ R + G R F K GF L+++ EW+++W L Y SPY D
Sbjct: 208 DEHLAVSQMQLRED-----VGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYVD 262
Query: 271 VSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIF 330
SHLD + EKR VGVFHELL L++ K+ + + + F+ VF RH GIF
Sbjct: 263 ASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIF 322
Query: 331 YISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQL 380
YIS+K +T +LREAY LI+K PL E+++KF ++ EG+ +R+ L
Sbjct: 323 YISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSRGL 372
>AT2G31290.2 | Symbols: | ubiquitin thiolesterase |
chr2:13344151-13345398 FORWARD
Length = 415
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 175/340 (51%), Gaps = 28/340 (8%)
Query: 43 RKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVKTFINQNP 102
+KD L+ A+ ++KR+ V +R+ +L P QV K ++ + P
Sbjct: 29 KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88
Query: 103 GLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDKVL 162
F Y + + R + + +EEE+ ++ E ++ RL KLLM++ ++ L
Sbjct: 89 CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 142
Query: 163 SADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSF-LELVEWNSEFAKSFIEQ 221
+ KL KR FG P+D+++ +VPKY + FRL G S +EL+ W E A S +E
Sbjct: 143 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 202
Query: 222 RAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDW---LELD---YISPYEDVSHLD 275
A++ P+F+ LP W + W +E + YISPYED L
Sbjct: 203 AAKKCGS------EPSFSCSLPS---------TWTKPWERFMEFNAFPYISPYEDHGDLV 247
Query: 276 QSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYISLK 335
+ S E EKR+VG+ HELLSL+L+K++ + L F E+ + + +H GIFY+ K
Sbjct: 248 EGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNK 307
Query: 336 GGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQE 375
+ T +LRE Y SELI KDPL +KDKF EL+++G E
Sbjct: 308 YQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE 347
>AT2G31290.1 | Symbols: | ubiquitin thiolesterase |
chr2:13344151-13345398 FORWARD
Length = 415
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 175/340 (51%), Gaps = 28/340 (8%)
Query: 43 RKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVKTFINQNP 102
+KD L+ A+ ++KR+ V +R+ +L P QV K ++ + P
Sbjct: 29 KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88
Query: 103 GLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDKVL 162
F Y + + R + + +EEE+ ++ E ++ RL KLLM++ ++ L
Sbjct: 89 CCFHVYLE------NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 142
Query: 163 SADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSF-LELVEWNSEFAKSFIEQ 221
+ KL KR FG P+D+++ +VPKY + FRL G S +EL+ W E A S +E
Sbjct: 143 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 202
Query: 222 RAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDW---LELD---YISPYEDVSHLD 275
A++ P+F+ LP W + W +E + YISPYED L
Sbjct: 203 AAKKCGS------EPSFSCSLPS---------TWTKPWERFMEFNAFPYISPYEDHGDLV 247
Query: 276 QSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYISLK 335
+ S E EKR+VG+ HELLSL+L+K++ + L F E+ + + +H GIFY+ K
Sbjct: 248 EGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNK 307
Query: 336 GGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQE 375
+ T +LRE Y SELI KDPL +KDKF EL+++G E
Sbjct: 308 YQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE 347
>AT4G01037.1 | Symbols: | ubiquitin thiolesterase |
chr4:451444-453030 REVERSE
Length = 528
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 181/337 (53%), Gaps = 18/337 (5%)
Query: 43 RKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVK--TFINQ 100
RK+ D +++DK+ K+ + K ++++P +++ + + + +
Sbjct: 79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138
Query: 101 NPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDK 160
PG+F+ ++ + S+ F S+ R +L+E RI+ E E ++V +L KL+MM+ DK
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYLDE-MRIRNELEDVLVVKLRKLVMMSIDK 193
Query: 161 VLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEFAKSFIE 220
+ +K+ H+K + GLP +F + +YP YFR+ P G + LEL W+ E A S E
Sbjct: 194 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 251
Query: 221 -------QRAEEESQLTGIRVRPNFN-YKLPPGFFLRKEMREWVRDWLELDYISPYEDVS 272
R EE L I P FN KLP G L K + + ++ YISPY+D S
Sbjct: 252 LSEDDNRTRESEERNLI-IDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFS 310
Query: 273 HLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYI 332
HL + E EK GV HELLSL+ KR V L F EE+RFS + RH +FY+
Sbjct: 311 HLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYV 370
Query: 333 SLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELL 369
SLKG + LREAY++SELIDKDPL +K+K L+
Sbjct: 371 SLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407
>AT3G58520.1 | Symbols: | ubiquitin thiolesterase |
chr3:21643921-21645277 REVERSE
Length = 418
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 179/356 (50%), Gaps = 15/356 (4%)
Query: 35 ISSLKVVWRKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKV 94
++ +++ W K++ LD I+ + K + + P + + V
Sbjct: 28 MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLTVPV 87
Query: 95 KTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLL 154
F+ + P LF + + S+ + +D +E+ I +E V RLC++L
Sbjct: 88 LRFLRRYPTLFHEF---PHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVL 144
Query: 155 MMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEF 214
MM + K +S L +K + GLP+++ LV KYP++F G L+LV+W EF
Sbjct: 145 MMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKA-SNGNPCLKLVKWRDEF 203
Query: 215 AKSFIEQRAEEESQLTGIRVR----------PNFNYKLPPGFFLRKEMREWVRDWLELDY 264
A S +++R E++ ++G R F P G+ +K+++ W+ ++ +L Y
Sbjct: 204 AFSALQKR-NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPY 262
Query: 265 ISPYEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFT 324
ISPY+D S++D S MEKR V V HELLSL++ K+ L E + F+ +FT
Sbjct: 263 ISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFT 322
Query: 325 RHSGIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQL 380
R+ GIFY+SLK T +L+E Y+ +L+D PL ++DKF ++ G+ RA L
Sbjct: 323 RYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGL 378
>AT3G58520.2 | Symbols: | ubiquitin thiolesterase |
chr3:21643921-21645277 REVERSE
Length = 406
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 27/356 (7%)
Query: 35 ISSLKVVWRKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKV 94
++ +++ W K++ LD I+ + K +L + + P N +
Sbjct: 28 MTKVRLKWVKNKNLDHVIDTETDLKAAC-----ILKDAIKRSPTGITIRENFNCYWNKRY 82
Query: 95 KTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLL 154
T ++ P + S+ + +D +E+ I +E V RLC++L
Sbjct: 83 PTLFHEFP----------HARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVL 132
Query: 155 MMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEF 214
MM + K +S L +K + GLP+++ LV KYP++F G L+LV+W EF
Sbjct: 133 MMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKA-SNGNPCLKLVKWRDEF 191
Query: 215 AKSFIEQRAEEESQLTGIRVR----------PNFNYKLPPGFFLRKEMREWVRDWLELDY 264
A S +++R E++ ++G R F P G+ +K+++ W+ ++ +L Y
Sbjct: 192 AFSALQKR-NEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPY 250
Query: 265 ISPYEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFT 324
ISPY+D S++D S MEKR V V HELLSL++ K+ L E + F+ +FT
Sbjct: 251 ISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFT 310
Query: 325 RHSGIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQL 380
R+ GIFY+SLK T +L+E Y+ +L+D PL ++DKF ++ G+ RA L
Sbjct: 311 RYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGL 366
>AT5G21970.1 | Symbols: | ubiquitin thiolesterase |
chr5:7262071-7263420 FORWARD
Length = 449
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 13/303 (4%)
Query: 93 KVKTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCK 152
K+ FI ++P LF+ Y D+ VL+ ++ + L+E ++ EN + +
Sbjct: 108 KISDFIRKSPKLFELYKDQ-----RGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTR 162
Query: 153 LLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNS 212
LMM+ DK L DK+VH +R+FGLP DF +N V +P +F++ G+G+ +LELV WN
Sbjct: 163 CLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKL-GDGEEYLELVSWNP 221
Query: 213 EFAKSFIEQRA---EEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISPYE 269
+A + +E++ E+ + + F K PP + R + + + Y+SPY
Sbjct: 222 AWAITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYA 281
Query: 270 DVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGI 329
D L+ S E +KR + V HELLS +L KR+ L F E+ +F +H GI
Sbjct: 282 DARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGI 341
Query: 330 FYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQLKTQKEVLKN 389
FY+S +G + L E Y+ ELI+K PL K+K ++ G++ R ++T + L
Sbjct: 342 FYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFT--GYRGRKRDIQTYSDTL-- 397
Query: 390 DME 392
DME
Sbjct: 398 DME 400
>AT1G71850.1 | Symbols: | ubiquitin thiolesterase |
chr1:27024875-27026287 REVERSE
Length = 470
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 43/386 (11%)
Query: 44 KDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVKTFINQNPG 103
+DR LD A+E++K + + + +EP + +P ++ FI P
Sbjct: 33 RDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRSFPS 92
Query: 104 LFDTYYDR---IKPK---SESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMA 157
+F + I P + +L A ++L E K +GL RL KLLM+
Sbjct: 93 VFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYK------QGL-ADRLLKLLMIN 145
Query: 158 KDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFR-----LTGCPGEGKSFLELVEWNS 212
+ + + L +K + GLP D++ +VP++P+YFR L GC GE LELV W++
Sbjct: 146 RINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGE----LELVCWSN 201
Query: 213 EFAKSFIEQRAE-----EESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISP 267
E A S +E++A E ++ + I F K GF + K+M++W+ DW +L YISP
Sbjct: 202 EHAVSVLEKKARTLRKGEYTKGSAI----AFPMKFSNGFVVDKKMKKWIDDWQKLPYISP 257
Query: 268 YEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHS 327
YE+ HL +S E +K V HE+++L + K+V + E + F V H
Sbjct: 258 YENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHP 317
Query: 328 GIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLE---------EGWQERAD 378
GIFY+S K T +LR+ YK LI+ + L ++++++L+ ++ D
Sbjct: 318 GIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKED 377
Query: 379 QLKTQKEVLKNDMEMMATRNWDLDGQ 404
+ K + EV D + N D+ G
Sbjct: 378 KGKVEGEVCDTDAK---AENDDISGS 400
>AT4G24320.1 | Symbols: | ubiquitin thiolesterase |
chr4:12602298-12603485 REVERSE
Length = 395
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 157/344 (45%), Gaps = 17/344 (4%)
Query: 39 KVVWRKDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVKTFI 98
+V W D LD A++++K K + +++ P + +P +I F
Sbjct: 22 RVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLHITAAAFF 81
Query: 99 NQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLE--NEGLIVSRLCKLLMM 156
+ P +F T+ +P L +R + + +EE+ I L + V RL K LM+
Sbjct: 82 QKYPSVFTTF----QPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKFLML 137
Query: 157 AKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGC----PGEGKSFLELVEWNS 212
L L + + GLP D++ +L+ YP YF +T GE L + +
Sbjct: 138 TGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTISSRRN 197
Query: 213 EFAKSFIEQRAEEESQLTGIRV----RPNFNYKLPPGFFLRKEMREWVRDWLELDYISPY 268
S +E+R E+ + G RV R ++ P G+ L K ++ WV W L YISPY
Sbjct: 198 NLPVSEMERR---EATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVEQWQNLPYISPY 254
Query: 269 EDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSG 328
E+ HL S + EK V V HELL L + K+ + E F F H G
Sbjct: 255 ENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKKALVHHPG 314
Query: 329 IFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEG 372
IFY+S K +T +LREAY L++K PL I+ +++ L+ +
Sbjct: 315 IFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKS 358
>AT1G79120.1 | Symbols: | ubiquitin thiolesterase |
chr1:29767314-29768555 REVERSE
Length = 413
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 126/262 (48%), Gaps = 16/262 (6%)
Query: 121 FLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDKVLSADKLVHVKREFGLPNDF 180
F+ +++ + EE E ++V+ L KLLMM+ D + +K+ ++ GLP DF
Sbjct: 135 FVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVPLEKVEFIQSAMGLPQDF 194
Query: 181 LVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEFAKSFIEQRAEEE--SQLTG----IRV 234
L+PKY +F L GK L L W+S A + E R E S+ G +R+
Sbjct: 195 KSTLIPKYTEFFSLKVI--NGKVNLVLENWDSSLAITAREDRLSREGFSESVGDRKRVRI 252
Query: 235 --------RPNFNYKLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLDQSSPEMEKRTV 286
R F PPGF E W ++++ SPY + D + P+ KR V
Sbjct: 253 TKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNARRFDAADPKARKRVV 312
Query: 287 GVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYISLKGGIKTAMLREA 346
V HELLSL++ KRV L F EY + +H GIFYI+ KG T L++A
Sbjct: 313 AVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGIFYITNKGARGTVFLKDA 372
Query: 347 YKDSELIDKDPLHEIKDKFVEL 368
Y S LI+K PL D+FV L
Sbjct: 373 YAGSNLIEKCPLLLFHDRFVAL 394
>AT5G45790.1 | Symbols: | ubiquitin thiolesterase |
chr5:18572473-18573664 FORWARD
Length = 354
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 28/328 (8%)
Query: 91 NIKVKTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRL 150
N+ V FI + P F+ + P S++ L + +++ + ++EE+ + E E V R+
Sbjct: 33 NVNVGAFIGKYPHAFEIF---THPFSKN-LCCKITEKFKVLIDEEENVVRECEVDAVKRV 88
Query: 151 CKLLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEW 210
KLL+++K VL L +++E GLP DF +++ KY + FRL LELV+
Sbjct: 89 KKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDR 143
Query: 211 NSEFAKSFIEQRAEE-------ESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELD 263
+ E S + EE E L+ F LP GF + K RE +++W +
Sbjct: 144 DDE---SLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVP 200
Query: 264 YISPYEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVF 323
Y+ PY D + + EKR V V HELLSL++ K V V L F ++ V
Sbjct: 201 YVKPY-DRKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVI 259
Query: 324 TRHSGIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELL------EEGWQERA 377
+H GIFY+S KG +T LREAY LI+ +P++ ++ K ++L+ +R
Sbjct: 260 LKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQRE 319
Query: 378 DQLKTQKEVLKNDMEMMATRNWDLDGQG 405
D+ T +E D+ + + +W+ G
Sbjct: 320 DE--THREEKSRDVLISSNEDWEGGRDG 345
>AT4G33495.1 | Symbols: RPD1 | RPD1 (ROOT PRIMORDIUM DEFECTIVE 1);
ubiquitin thiolesterase | chr4:16111349-16112578 REVERSE
Length = 409
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 17/339 (5%)
Query: 44 KDRKLDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVK---TFINQ 100
+D D +E +K+ + + +L++P I K F+ +
Sbjct: 48 RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLK 107
Query: 101 NPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDK 160
P +F+ Y + + +L+ R + + + + E L+ V+RL KL+MM+
Sbjct: 108 FPHVFEIYEHPV----QRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 163
Query: 161 VLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEFAKSFIE 220
+ + + + EFGLP DF +++ K+P +FRL ++E+VE + + IE
Sbjct: 164 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 223
Query: 221 QRAEEESQLTGI---RVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISPYEDVSHLDQS 277
+ E E + GI VR +F PPGF + K R V W L Y SPYED+S D
Sbjct: 224 RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 283
Query: 278 SPE----MEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYIS 333
S E +EKR+V HELLSL++ K++ + + F +H GIFYIS
Sbjct: 284 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 343
Query: 334 LKGG---IKTAMLREAYKDSELIDKDPLHEIKDKFVELL 369
+G + T LRE YK EL++ + ++ + + EL+
Sbjct: 344 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382
>AT1G06440.1 | Symbols: | ubiquitin thiolesterase |
chr1:1963733-1964905 REVERSE
Length = 390
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 91 NIKVKTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRL 150
N +F+ + P +F YD +K + F R +D +E L+V RL
Sbjct: 86 NRGAASFLRKYPHIFHVLYDPVKAEP----FCRLTDVAMEISRQEALAITATLSLVVDRL 141
Query: 151 CKLLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELV-- 208
+LL M+ K + + V RE GLP+DF +++ K P+ F+L+ LELV
Sbjct: 142 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 201
Query: 209 -----EWNSEFAKSFIEQRAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELD 263
E+ + K + + ++E+ + ++ +F + PPG L K + V++W L
Sbjct: 202 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 261
Query: 264 YISPYEDVSHLDQSSPE---MEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFS 320
Y+ PYED+ +S +EKR V + HE L+L++ K V V + F + +
Sbjct: 262 YVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIR 321
Query: 321 SVFTRHSGIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEG 372
+F H G+FY+S KG T LREAY+ LID +P+++ + K ++L+ G
Sbjct: 322 DLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLG 373
>AT4G08940.1 | Symbols: | ubiquitin thiolesterase |
chr4:5730986-5732173 REVERSE
Length = 395
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 140/272 (51%), Gaps = 22/272 (8%)
Query: 93 KVKTFINQNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCK 152
KV FI ++P +F TY S+ ++L ++ + + L+EEK + E V+ + K
Sbjct: 118 KVTKFIPKHPLIFQTYR-----HSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRK 172
Query: 153 LLMMAKDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNS 212
LLMM KDK + K+ H + FG+P DF + V KYP+YFR+ G+G LELV W++
Sbjct: 173 LLMMTKDKRILLSKIHHTRLLFGIPEDFR-DRVAKYPDYFRVV-TGGDGNRVLELVNWDT 230
Query: 213 EFAKSFIEQRAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDY------IS 266
A S +E+ + + + F + + G KE+ +D +L+ +S
Sbjct: 231 NLAVSELERLF----MIDEDKAKRVFKFPVKHG----KELELEEKDTRKLNLLNTFPLVS 282
Query: 267 PYEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRH 326
PY D LD S E EK VG+ HE L+L+L KR + + +F +E+ + + +
Sbjct: 283 PYSDGWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQ 342
Query: 327 SGIFYISLKGGIKTAMLREAY-KDSELIDKDP 357
S FY++ T L++AY ++ L+ KDP
Sbjct: 343 SMSFYLAGTEMNWTVFLKDAYDENGVLVSKDP 374
>AT2G39120.1 | Symbols: | ubiquitin thiolesterase |
chr2:16321794-16322957 FORWARD
Length = 387
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 23/372 (6%)
Query: 42 WRKDRKLDFA--IEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXNIKVKTFIN 99
W++D D I + + K + ++ EP + IP + K+ F+
Sbjct: 31 WKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLR 90
Query: 100 QNPGLFDTYYDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKD 159
+ P +F+ + + P+ ++ + R + +E+ + + + RL KL++M+KD
Sbjct: 91 KFPSIFEEF---VGPEY-NLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKD 146
Query: 160 KVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWN------SE 213
VL + +K GLP+D+L + FR K V++N S
Sbjct: 147 NVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLA--VDYNGGDKVLSV 204
Query: 214 FAKSFIEQRAEEESQLTGIRVRPNFNYKLPPGFFLRKEMREWVRDWLELDYISPYEDVSH 273
K+ +++R E S L I P F K G LR ++ +W+ ++ +L Y+SPY+D S
Sbjct: 205 LQKNAMKKRRGEVS-LEEIEF-PLFPSK---GCRLRVKIEDWLMEFQKLPYVSPYDDYSC 259
Query: 274 LDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYIS 333
LD SS EKR VG HELL L + L + + F RH IFY+S
Sbjct: 260 LDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLS 319
Query: 334 LKGGIKTAMLREAYKDSELIDKDPLHEIKDKFVELLEEGWQERADQLKTQKEVLKNDMEM 393
+K TA+LRE Y+D ++ P+ ++ K+++L++ LK+++ E
Sbjct: 320 MKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNS----ELILKSRRNSFGFRDEG 375
Query: 394 MATRNWDLDGQG 405
+ ++ DLD +G
Sbjct: 376 VVDKDLDLDFEG 387
>AT5G62990.1 | Symbols: emb1692 | emb1692 (embryo defective 1692);
ubiquitin thiolesterase | chr5:25277828-25279312 FORWARD
Length = 494
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 157/338 (46%), Gaps = 24/338 (7%)
Query: 48 LDFAIEKDKRYKVCARVVKEVLNEPGQVIPXXXXXXXXXXXXXN--IKVKTFINQNPGLF 105
LD + K R + ++ +L++P IP + + + I + P +F
Sbjct: 65 LDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIF 124
Query: 106 DTY--------YDRIKPKSESVLFLRASDRLRNFLEEEKRIQLENEGLIVSRLCKLLMMA 157
+ + + KP S+ L +R + + +E ++ E + ++L KLLM++
Sbjct: 125 ELFTTPTPHLPMNATKPLSQ--LCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLS 182
Query: 158 KDKVLSADKLVHVKREFGLPNDFLVNLVPKYPNYFRLTGCPGEGKSFLELVEWNSEFAKS 217
+ L KLVH+ +FG P +F L YP+ F+ T G++ LELV + E A
Sbjct: 183 SHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFK-TVDTSYGRA-LELVSSDPELANQ 240
Query: 218 FIEQRAEEESQLTGIRVRPNFNYK---LPPGFFLRKEMREWVRDWLELDYISPYEDVS-H 273
+ G+ V +K L G L++ + ++ + E + PY+ S +
Sbjct: 241 MPSPEVDR-----GLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDY 295
Query: 274 LDQSSPEMEKRTVGVFHELLSLSLFKRVPVPILGKFTEEYRFSNAFSSVFTRHSGIFYIS 333
L S E EKR V E+L L++ KR + L F +E+ N + RH +FY+S
Sbjct: 296 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 355
Query: 334 LKGGIKTAMLREAYKDS-ELIDKDPLHEIKDKFVELLE 370
+KG + L EAY D+ +L+DKD I+++ ++L++
Sbjct: 356 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQ 393