Jatropha Genome Database
- JcCB0183081.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0183081.10 + phase: 0 /partial
(270 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G04890.1 | Symbols: PDF2 | PDF2 (PROTODERMAL FACTOR 2); DNA b... 402 e-112
AT4G21750.2 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA bin... 392 e-109
AT4G21750.1 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA bin... 392 e-109
AT1G05230.3 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA... 322 2e-88
AT1G05230.2 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA... 322 2e-88
AT1G05230.1 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA... 322 2e-88
AT4G00730.2 | Symbols: ANL2, AHDP | ANL2 (ANTHOCYANINLESS 2); tr... 230 8e-61
AT4G00730.1 | Symbols: ANL2, AHDP | ANL2 (ANTHOCYANINLESS 2); tr... 230 9e-61
AT3G61150.1 | Symbols: HDG1, HD-GL2-1 | HDG1 (HOMEODOMAIN GLABRO... 222 2e-58
AT1G73360.1 | Symbols: HDG11, EDT1, ATHDG11 | HDG11 (HOMEODOMAIN... 217 5e-57
AT2G32370.1 | Symbols: HDG3 | HDG3 (HOMEODOMAIN GLABROUS 3); DNA... 214 5e-56
AT5G52170.1 | Symbols: HDG7 | HDG7 (HOMEODOMAIN GLABROUS 7); DNA... 199 1e-51
AT1G17920.1 | Symbols: HDG12 | HDG12 (HOMEODOMAIN GLABROUS 12); ... 194 5e-50
AT5G46880.1 | Symbols: HB-7, HDG5 | HB-7 (HOMEOBOX-7); DNA bindi... 194 6e-50
AT1G79840.1 | Symbols: GL2 | GL2 (GLABRA 2); DNA binding / trans... 158 4e-39
AT3G03260.1 | Symbols: HDG8 | HDG8 (HOMEODOMAIN GLABROUS 8); DNA... 152 3e-37
AT5G17320.1 | Symbols: HDG9 | HDG9 (HOMEODOMAIN GLABROUS 9); DNA... 143 1e-34
AT4G17710.1 | Symbols: HDG4 | HDG4 (HOMEODOMAIN GLABROUS 4); DNA... 141 4e-34
AT1G34650.1 | Symbols: HDG10 | HDG10 (HOMEODOMAIN GLABROUS 10); ... 124 5e-29
AT4G25530.1 | Symbols: FWA, HDG6 | FWA; DNA binding / protein bi... 104 6e-23
AT1G30490.1 | Symbols: PHV, ATHB9 | PHV (PHAVOLUTA); DNA binding... 66 2e-11
AT5G60690.1 | Symbols: REV, IFL, IFL1 | REV (REVOLUTA); DNA bind... 65 4e-11
AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | PHB (PHABU... 64 8e-11
AT4G32880.1 | Symbols: ATHB-8, ATHB8 | ATHB-8 (HOMEOBOX GENE 8);... 62 4e-10
AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA... 62 4e-10
AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA... 62 4e-10
AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA... 62 4e-10
AT2G46680.1 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS THALI... 54 1e-07
AT4G37790.1 | Symbols: HAT22 | HAT22; transcription factor | chr... 54 1e-07
AT2G46680.2 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS THALI... 54 2e-07
AT3G01470.1 | Symbols: ATHB-1, ATHB1, HD-ZIP-1, HAT5 | ATHB-1 (A... 50 1e-06
AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding / transcription ... 50 1e-06
AT5G03790.1 | Symbols: ATHB51, LMI1, HB51 | HB51; DNA binding / ... 50 1e-06
AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS ... 49 2e-06
AT3G61890.1 | Symbols: ATHB-12, ATHB12 | ATHB-12 (ARABIDOPSIS TH... 49 5e-06
AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidopsis thaliana hom... 48 5e-06
AT1G69780.1 | Symbols: ATHB13 | ATHB13; DNA binding / sequence-s... 48 7e-06
AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding / transcription ... 47 9e-06
>AT4G04890.1 | Symbols: PDF2 | PDF2 (PROTODERMAL FACTOR 2); DNA
binding / transcription factor | chr4:2476970-2480090
REVERSE
Length = 743
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/276 (73%), Positives = 229/276 (82%), Gaps = 9/276 (3%)
Query: 1 MFQPNMFESHHLFDMSMTPKS-SENELAKL--KDDDCETKSGTE-TTEAPSGDD-QDPNQ 55
M+ PNMFESHH+FDM TPKS S+N+L ++DD ETKSGTE TTE PSG++ QDP+Q
Sbjct: 1 MYHPNMFESHHMFDM--TPKSTSDNDLGITGSREDDFETKSGTEVTTENPSGEELQDPSQ 58
Query: 56 RP-KKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
RP KKKRYHRHTQRQIQE+E+FFKECPHPDDKQRKELSR+L LEPLQVKFWFQNKRTQMK
Sbjct: 59 RPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMK 118
Query: 115 AQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARL 174
AQ ER EN ILKS+N+KLRAEN+RYKEAL NA+CPNCGGPAA+GEMSFDEQHLRIENARL
Sbjct: 119 AQSERHENQILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARL 178
Query: 175 REEIDRISGIAAKYVGK-XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGATDLLR 233
REEIDRIS IAAKYVGK DL V NFG Q GFVGEMYG D+LR
Sbjct: 179 REEIDRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVGEMYGTGDILR 238
Query: 234 SITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
S++ P+E +KP+IVELAVAAMEEL+RMAQ G+PLW+
Sbjct: 239 SVSIPSETDKPIIVELAVAAMEELVRMAQTGDPLWL 274
>AT4G21750.2 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA
binding / sequence-specific DNA binding / transcription
factor | chr4:11556965-11560243 FORWARD
Length = 762
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/285 (70%), Positives = 228/285 (80%), Gaps = 18/285 (6%)
Query: 1 MFQPNMFESHH-LFDMSMTPKSSENELAKL--KDDDCETKSGTETT-EAPSGDD-QDPNQ 55
M+ PNMFESHH +FDM TPK+SEN+L ++D ETKSG E T E P ++ QDPNQ
Sbjct: 1 MYHPNMFESHHHMFDM--TPKNSENDLGITGSHEEDFETKSGAEVTMENPLEEELQDPNQ 58
Query: 56 RP-KKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
RP KKKRYHRHTQRQIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKRTQMK
Sbjct: 59 RPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMK 118
Query: 115 AQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARL 174
AQHER EN ILKSEN+KLRAEN+RYK+AL NA+CPNCGGPAA+GEMSFDEQHLRIENARL
Sbjct: 119 AQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARL 178
Query: 175 REEIDRISGIAAKYVGKXXXXXXXXXXXXX------XXXXDLGVSNFG----AQPGFVGE 224
REEIDRIS IAAKYVGK DL V NFG + GFVGE
Sbjct: 179 REEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVGE 238
Query: 225 MYGATDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
M+G++D+LRS++ P+EA+KPMIVELAVAAMEEL+RMAQ G+PLWV
Sbjct: 239 MFGSSDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWV 283
>AT4G21750.1 | Symbols: ATML1 | ATML1 (MERISTEM LAYER 1); DNA
binding / sequence-specific DNA binding / transcription
factor | chr4:11556965-11560243 FORWARD
Length = 762
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/285 (70%), Positives = 228/285 (80%), Gaps = 18/285 (6%)
Query: 1 MFQPNMFESHH-LFDMSMTPKSSENELAKL--KDDDCETKSGTETT-EAPSGDD-QDPNQ 55
M+ PNMFESHH +FDM TPK+SEN+L ++D ETKSG E T E P ++ QDPNQ
Sbjct: 1 MYHPNMFESHHHMFDM--TPKNSENDLGITGSHEEDFETKSGAEVTMENPLEEELQDPNQ 58
Query: 56 RP-KKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
RP KKKRYHRHTQRQIQE+E+FFKECPHPDDKQRKELSREL LEPLQVKFWFQNKRTQMK
Sbjct: 59 RPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMK 118
Query: 115 AQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARL 174
AQHER EN ILKSEN+KLRAEN+RYK+AL NA+CPNCGGPAA+GEMSFDEQHLRIENARL
Sbjct: 119 AQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARL 178
Query: 175 REEIDRISGIAAKYVGKXXXXXXXXXXXXX------XXXXDLGVSNFG----AQPGFVGE 224
REEIDRIS IAAKYVGK DL V NFG + GFVGE
Sbjct: 179 REEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGNFGNNNNSHTGFVGE 238
Query: 225 MYGATDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
M+G++D+LRS++ P+EA+KPMIVELAVAAMEEL+RMAQ G+PLWV
Sbjct: 239 MFGSSDILRSVSIPSEADKPMIVELAVAAMEELVRMAQTGDPLWV 283
>AT1G05230.3 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA
binding / transcription factor | chr1:1513388-1517024
REVERSE
Length = 719
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/282 (60%), Positives = 197/282 (69%), Gaps = 25/282 (8%)
Query: 1 MFQPNMF--------ESHHLFDMSMTPKSSENELAKLKDDDCE---TKSGTETTEAPSGD 49
MF+PNM ++H ++ N L+DD+ + TKSG+E E SG+
Sbjct: 1 MFEPNMLLAAMNNADSNNHNYN-----HEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGN 55
Query: 50 DQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
DQDP KKKRYHRHTQ QIQEMEAFFKECPHPDDKQRK+LSREL LEPLQVKFWFQNK
Sbjct: 56 DQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNK 115
Query: 110 RTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRI 169
RTQMK HER ENS L++ENEKLR +N RY+EAL NASCPNCGGP A+GEMSFDE LR+
Sbjct: 116 RTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRL 175
Query: 170 ENARLREEIDRISGIAAKYVGK-XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYG- 227
ENARLREEIDRIS IAAKYVGK +L + N G GE YG
Sbjct: 176 ENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG------GEAYGN 229
Query: 228 -ATDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLW 268
DLL+SIT PTE++KP+I++L+VAAMEELMRM Q EPLW
Sbjct: 230 NPNDLLKSITAPTESDKPVIIDLSVAAMEELMRMVQVDEPLW 271
>AT1G05230.2 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA
binding / transcription factor | chr1:1513388-1517024
REVERSE
Length = 721
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/282 (60%), Positives = 197/282 (69%), Gaps = 25/282 (8%)
Query: 1 MFQPNMF--------ESHHLFDMSMTPKSSENELAKLKDDDCE---TKSGTETTEAPSGD 49
MF+PNM ++H ++ N L+DD+ + TKSG+E E SG+
Sbjct: 1 MFEPNMLLAAMNNADSNNHNYN-----HEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGN 55
Query: 50 DQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
DQDP KKKRYHRHTQ QIQEMEAFFKECPHPDDKQRK+LSREL LEPLQVKFWFQNK
Sbjct: 56 DQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNK 115
Query: 110 RTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRI 169
RTQMK HER ENS L++ENEKLR +N RY+EAL NASCPNCGGP A+GEMSFDE LR+
Sbjct: 116 RTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRL 175
Query: 170 ENARLREEIDRISGIAAKYVGK-XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYG- 227
ENARLREEIDRIS IAAKYVGK +L + N G GE YG
Sbjct: 176 ENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG------GEAYGN 229
Query: 228 -ATDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLW 268
DLL+SIT PTE++KP+I++L+VAAMEELMRM Q EPLW
Sbjct: 230 NPNDLLKSITAPTESDKPVIIDLSVAAMEELMRMVQVDEPLW 271
>AT1G05230.1 | Symbols: HDG2 | HDG2 (HOMEODOMAIN GLABROUS 2); DNA
binding / transcription factor | chr1:1513388-1517024
REVERSE
Length = 721
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/282 (60%), Positives = 197/282 (69%), Gaps = 25/282 (8%)
Query: 1 MFQPNMF--------ESHHLFDMSMTPKSSENELAKLKDDDCE---TKSGTETTEAPSGD 49
MF+PNM ++H ++ N L+DD+ + TKSG+E E SG+
Sbjct: 1 MFEPNMLLAAMNNADSNNHNYN-----HEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGN 55
Query: 50 DQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNK 109
DQDP KKKRYHRHTQ QIQEMEAFFKECPHPDDKQRK+LSREL LEPLQVKFWFQNK
Sbjct: 56 DQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNK 115
Query: 110 RTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRI 169
RTQMK HER ENS L++ENEKLR +N RY+EAL NASCPNCGGP A+GEMSFDE LR+
Sbjct: 116 RTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRL 175
Query: 170 ENARLREEIDRISGIAAKYVGK-XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYG- 227
ENARLREEIDRIS IAAKYVGK +L + N G GE YG
Sbjct: 176 ENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMGNIG------GEAYGN 229
Query: 228 -ATDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLW 268
DLL+SIT PTE++KP+I++L+VAAMEELMRM Q EPLW
Sbjct: 230 NPNDLLKSITAPTESDKPVIIDLSVAAMEELMRMVQVDEPLW 271
>AT4G00730.2 | Symbols: ANL2, AHDP | ANL2 (ANTHOCYANINLESS 2);
transcription factor/ transcription regulator |
chr4:301071-304103 REVERSE
Length = 570
Score = 230 bits (586), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 168/263 (63%), Gaps = 19/263 (7%)
Query: 13 FDMSMTPKSSENELAKLKDDDCETKSGTETTEAPSGDDQDPNQRP-KKKRYHRHTQRQIQ 71
FD S+ +S E E E++SG++ E SG+DQD +P +KKRYHRHT +QIQ
Sbjct: 96 FDGSVNRRSREEEH--------ESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQ 147
Query: 72 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEK 131
E+E+ FKECPHPD+KQR ELS+ L LE QVKFWFQN+RTQMK Q ER EN++L+ EN+K
Sbjct: 148 ELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDK 207
Query: 132 LRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGK 191
LRAEN +EA+ N C NCGGPA LG++S +E HLRIENARL++E+DR+ + K++G
Sbjct: 208 LRAENMSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGH 267
Query: 192 XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGATDLL-----RSITGPTEAEKPMI 246
+G +N G F + G L +S +K ++
Sbjct: 268 HHNHHYNSSLELA-----VGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVL 322
Query: 247 VELAVAAMEELMRMAQAGEPLWV 269
+ELA+ AM+EL+++AQ+ EPLWV
Sbjct: 323 LELALTAMDELVKLAQSEEPLWV 345
>AT4G00730.1 | Symbols: ANL2, AHDP | ANL2 (ANTHOCYANINLESS 2);
transcription factor/ transcription regulator |
chr4:299741-304103 REVERSE
Length = 802
Score = 230 bits (586), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 168/263 (63%), Gaps = 19/263 (7%)
Query: 13 FDMSMTPKSSENELAKLKDDDCETKSGTETTEAPSGDDQDPNQRP-KKKRYHRHTQRQIQ 71
FD S+ +S E E E++SG++ E SG+DQD +P +KKRYHRHT +QIQ
Sbjct: 96 FDGSVNRRSREEEH--------ESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQ 147
Query: 72 EMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEK 131
E+E+ FKECPHPD+KQR ELS+ L LE QVKFWFQN+RTQMK Q ER EN++L+ EN+K
Sbjct: 148 ELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDK 207
Query: 132 LRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGK 191
LRAEN +EA+ N C NCGGPA LG++S +E HLRIENARL++E+DR+ + K++G
Sbjct: 208 LRAENMSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGH 267
Query: 192 XXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGATDLL-----RSITGPTEAEKPMI 246
+G +N G F + G L +S +K ++
Sbjct: 268 HHNHHYNSSLELA-----VGTNNNGGHFAFPPDFGGGGGCLPPQQQQSTVINGIDQKSVL 322
Query: 247 VELAVAAMEELMRMAQAGEPLWV 269
+ELA+ AM+EL+++AQ+ EPLWV
Sbjct: 323 LELALTAMDELVKLAQSEEPLWV 345
>AT3G61150.1 | Symbols: HDG1, HD-GL2-1 | HDG1 (HOMEODOMAIN GLABROUS
1); DNA binding / transcription factor |
chr3:22630769-22634875 FORWARD
Length = 808
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 161/261 (61%), Gaps = 21/261 (8%)
Query: 30 KDDDCETKSGTETTEAPSGDDQDPNQRP--KKKRYHRHTQRQIQEMEAFFKECPHPDDKQ 87
+ +D E++S ++ EA SGDD D + RP KKKRYHRHT +QIQ++E+ FKEC HPD+KQ
Sbjct: 80 RGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQ 139
Query: 88 RKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRYKEALGNAS 147
R +LSR L L+P QVKFWFQN+RTQMK Q ER EN++L+ EN+KLRAEN +EA+ N
Sbjct: 140 RLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPM 199
Query: 148 CPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKXXXXXXXXXXXXXXXX 207
C NCGGPA +GE+S +EQHLRIEN+RL++E+DR+ + K++G+
Sbjct: 200 CGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGV 259
Query: 208 XDLGVSNFG-------------AQPGFVGEMYGATDLLRSIT--GPTEA----EKPMIVE 248
A P F + L+ ++ P ++ ++
Sbjct: 260 GVGSGGCNVGGGFTLSSPLLPQASPRFEISNGTGSGLVATVNRQQPVSVSDFDQRSRYLD 319
Query: 249 LAVAAMEELMRMAQAGEPLWV 269
LA+AAM+EL++MAQ EPLWV
Sbjct: 320 LALAAMDELVKMAQTREPLWV 340
>AT1G73360.1 | Symbols: HDG11, EDT1, ATHDG11 | HDG11 (HOMEODOMAIN
GLABROUS 11); DNA binding / transcription factor |
chr1:27578893-27581820 REVERSE
Length = 722
Score = 217 bits (553), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 146/229 (63%), Gaps = 22/229 (9%)
Query: 58 KKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQH 117
KKKRYHRHT +QIQ +E+ FKECPHPD+KQR +LSRELGL P Q+KFWFQN+RTQ+KAQH
Sbjct: 32 KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQH 91
Query: 118 ERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREE 177
ER +NS LK+EN+K+R EN +EAL +A CPNCGGP + FDEQ LRIENA LREE
Sbjct: 92 ERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLREE 151
Query: 178 IDRISGIAAKYVGKXXXXXXXXXXXXXXXXXDL------GVSNFGAQPGFVGEMYGATDL 231
++R+S IA+KY+G+ DL G FG P ++ + +
Sbjct: 152 LERMSTIASKYMGR-PISQLSTLHPMHISPLDLSMTSLTGCGPFGHGPSLDFDLLPGSSM 210
Query: 232 LRSITGP------------TEAEKPMIVELAVAAMEELMRMAQAGEPLW 268
GP ++ +KP++ +A+ AMEEL+R+ Q EPLW
Sbjct: 211 ---AVGPNNNLQSQPNLAISDMDKPIMTGIALTAMEELLRLLQTNEPLW 256
>AT2G32370.1 | Symbols: HDG3 | HDG3 (HOMEODOMAIN GLABROUS 3); DNA
binding / transcription factor | chr2:13742408-13745840
FORWARD
Length = 725
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 145/226 (64%), Gaps = 16/226 (7%)
Query: 48 GDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 107
G++Q P R KKK+Y+RHTQ QI EMEAFF+ECPHPDDKQR +LS +LGL+P+Q+KFWFQ
Sbjct: 60 GNNQAP--RHKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQ 117
Query: 108 NKRTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHL 167
NKRTQ K Q ER ENS L++ N LR+EN R +EA+ A CP CGG A+GEM+F+E HL
Sbjct: 118 NKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHL 177
Query: 168 RIENARLREEIDRISGIA---AKYVGKXXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGE 224
RI NARL EEI ++S A ++ G + G+ G VG
Sbjct: 178 RILNARLTEEIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGM----GSKGNVGN 233
Query: 225 MYGATDLLRSITGPTEAE-KPMIVELAVAAMEELMRMAQAGEPLWV 269
R TGP +A KP+I+ELA AMEEL+ MAQ EPLW+
Sbjct: 234 HS------RETTGPADANTKPIIMELAFGAMEELLVMAQVAEPLWM 273
>AT5G52170.1 | Symbols: HDG7 | HDG7 (HOMEODOMAIN GLABROUS 7); DNA
binding / sequence-specific DNA binding / transcription
factor | chr5:21196974-21199959 FORWARD
Length = 682
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 155/249 (62%), Gaps = 31/249 (12%)
Query: 26 LAKLKDDDCETKSGTETT-EAPSGDDQDPNQRPKKKR----YHRHTQRQIQEMEAFFKEC 80
L KLKDD+ E++S ++ + +A SGD+ QRPKKK+ YHRHT QIQE+E+FFKEC
Sbjct: 20 LGKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFFKEC 79
Query: 81 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRYK 140
PHP++KQR EL ++L LE Q+KFWFQN+RTQMK Q ER EN ILK ENEKLR ENS K
Sbjct: 80 PHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQENEKLRLENSFLK 139
Query: 141 EALGNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKXXXXXXXXX 200
E++ + C +CGG GE+SF++ LRIENA+L+EE+DRI +A +++G
Sbjct: 140 ESMRGSLCIDCGGAVIPGEVSFEQHQLRIENAKLKEELDRICALANRFIGGSISLEQPSN 199
Query: 201 XXXXXXXXDLGVSNFGAQPGFVGE-MYGATDLLRSITGPTEAEKPMIVELAVAAMEELMR 259
G+Q +G + G T L M ++LA+ AM+EL++
Sbjct: 200 ------------GGIGSQHLPIGHCVSGGTSL-------------MFMDLAMEAMDELLK 234
Query: 260 MAQAGEPLW 268
+A+ LW
Sbjct: 235 LAELETSLW 243
>AT1G17920.1 | Symbols: HDG12 | HDG12 (HOMEODOMAIN GLABROUS 12);
transcription factor | chr1:6162214-6165033 REVERSE
Length = 687
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERT 120
R+HRHT QIQ +E+ F EC HPD+KQR +LSRELGL P Q+KFWFQN+RTQ KAQHER
Sbjct: 24 RFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKKAQHERA 83
Query: 121 ENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDR 180
+N LK EN+K+R EN +EA+ +A CP+CG + FDEQ LRIENA+LR+E++R
Sbjct: 84 DNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYFDEQKLRIENAQLRDELER 143
Query: 181 ISGIAAKYVGKXXXXXXXXXXXXXXXXXDL---GVS-NFGAQPGFVGEMYGATDLLRSIT 236
+S IAAK++G+ +L G S +F PG M + +
Sbjct: 144 VSSIAAKFLGRPISHLPPLLNPMHVSPLELFHTGPSLDFDLLPGSCSSMSVPSLPSQPNL 203
Query: 237 GPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
+E +K ++ +AV AMEEL+R+ Q EPLW+
Sbjct: 204 VLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWI 236
>AT5G46880.1 | Symbols: HB-7, HDG5 | HB-7 (HOMEOBOX-7); DNA binding
/ transcription factor | chr5:19031540-19035388 FORWARD
Length = 820
Score = 194 bits (492), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 143/257 (55%), Gaps = 27/257 (10%)
Query: 37 KSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELG 96
K G E+ DD+ P KKKRYHRHT RQIQEMEA FKE PHPDDKQRK LS ELG
Sbjct: 91 KFGNESDVNELHDDEQP-PPAKKKRYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAELG 149
Query: 97 LEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAA 156
L+P QVKFWFQN+RTQMKAQ +R EN +L++EN+ L++EN + L SCP+CGGP
Sbjct: 150 LKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSENCHLQAELRCLSCPSCGGPTV 209
Query: 157 LGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKXXXXXXXXXXXXX----------XX 206
LG++ F+E H IEN RLREE+DR+ IA++Y G+
Sbjct: 210 LGDIPFNEIH--IENCRLREELDRLCCIASRYTGRPMQSMPPSQPLINPSPMLPHHQPSL 267
Query: 207 XXDLGV--SNFGAQPGFVGEMYGATDLLRSITGPT------------EAEKPMIVELAVA 252
D+ V NF Q M D T + EK + +E AV+
Sbjct: 268 ELDMSVYAGNFPEQSCTDMMMLPPQDTACFFPDQTANNNNNNNMLLADEEKVIAMEFAVS 327
Query: 253 AMEELMRMAQAGEPLWV 269
++EL +M EPLW+
Sbjct: 328 CVQELTKMCDTEEPLWI 344
>AT1G79840.1 | Symbols: GL2 | GL2 (GLABRA 2); DNA binding /
transcription factor | chr1:30037526-30041013 FORWARD
Length = 747
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 125/218 (57%), Gaps = 37/218 (16%)
Query: 54 NQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 113
N+R K+K+YHRHT QI+ MEA FKE PHPD+KQR++LS++LGL P QVKFWFQN+RTQ+
Sbjct: 98 NKR-KRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI 156
Query: 114 KAQHERTENSILKSENEKLRAENSRYKEAL--GNASCPNCGGPAALGEMSFDEQHLRIEN 171
KA ER ENS+LK+E EKLR EN +E+ N+SCPNCGG D+ HL EN
Sbjct: 157 KAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP-------DDLHL--EN 207
Query: 172 ARLREEIDRISGIAAKYVGKXXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGATDL 231
++L+ E+D++ LG + + Q +
Sbjct: 208 SKLKAELDKLRAA-------------------------LGRTPYPLQASCSDDQEHRLGS 242
Query: 232 LRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
L TG EK I E++ A EL +MA +GEP+W+
Sbjct: 243 LDFYTGVFALEKSRIAEISNRATLELQKMATSGEPMWL 280
>AT3G03260.1 | Symbols: HDG8 | HDG8 (HOMEODOMAIN GLABROUS 8); DNA
binding / transcription factor | chr3:755356-759234
REVERSE
Length = 699
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 119/215 (55%), Gaps = 8/215 (3%)
Query: 59 KKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHE 118
K+ HRHT +QIQ +EA+FKECPHPD++QR +L REL LEP Q+KFWFQNKRTQ K Q +
Sbjct: 24 KRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQED 83
Query: 119 RTENSILKSENEKLRAENSRYKEALGNASCPNCGGPA-ALGEMSFDEQHLRIENARLREE 177
R+ N +L+ ENE L+++N +AL + CP CGGP E + Q LR ENARL++
Sbjct: 84 RSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGPPFGREERGHNLQKLRFENARLKDH 143
Query: 178 IDRISGIAAKYVGKXXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGATDLLRSITG 237
DRIS ++ G++ G YG + I
Sbjct: 144 RDRISNFVDQHKPNEPTVEDSLAYVPSLDRISYGIN--GGNMYEPSSSYGPPNF--QIIQ 199
Query: 238 P---TEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
P E + ++ E+A +A+EEL R+ A E WV
Sbjct: 200 PRPLAETDMSLLSEIAASAVEELKRLFLAEEQFWV 234
>AT5G17320.1 | Symbols: HDG9 | HDG9 (HOMEODOMAIN GLABROUS 9); DNA
binding / sequence-specific DNA binding / transcription
factor | chr5:5703380-5707637 REVERSE
Length = 718
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Query: 36 TKSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL 95
T+ + E + D + N R +KK YHRHT QI +E +FKECPHPD+ QR+ L EL
Sbjct: 4 TRDDNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL 63
Query: 96 GLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPA 155
L+P Q+KFWFQNKRTQ K+ +E+ +N+ L++EN K+R EN ++AL N CP CGG
Sbjct: 64 NLKPKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRG 123
Query: 156 ALGEMSFDE-QHLRIENARLREEIDRISGIAAKYVG 190
E Q LR +NA L++E +R+S +Y G
Sbjct: 124 PGREDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGG 159
>AT4G17710.1 | Symbols: HDG4 | HDG4 (HOMEODOMAIN GLABROUS 4); DNA
binding / transcription factor | chr4:9856327-9859288
REVERSE
Length = 709
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 86/129 (66%), Gaps = 12/129 (9%)
Query: 58 KKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQH 117
KKKRYHRHT QIQ+MEA FKE HPD K R LS++LGL P+QVKFWFQNKRTQ+KAQ
Sbjct: 88 KKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQ 147
Query: 118 ERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREE 177
R++N+ LK+ENE L+ E+ + C CG +LR+ENARLR+E
Sbjct: 148 SRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG------------HNLRLENARLRQE 195
Query: 178 IDRISGIAA 186
+DR+ I +
Sbjct: 196 LDRLRSIVS 204
>AT1G34650.1 | Symbols: HDG10 | HDG10 (HOMEODOMAIN GLABROUS 10); DNA
binding / transcription factor | chr1:12693011-12697778
FORWARD
Length = 708
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 65 HTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSI 124
H+ Q+Q +EAFF ECPHPDD QR++L EL L+ Q+KFWFQN+RTQ + +E+ +N
Sbjct: 23 HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIA 82
Query: 125 LKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGI 184
L+ EN K+R N ++AL CP CGGP E + Q LR +N L+ E +R+S
Sbjct: 83 LRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTEYERLSSY 142
Query: 185 AAKYVGKXXXXXXXXXXXXXXXXXDL-GVSNFGAQPGFVGEMYGATD------------- 230
K+ G DL G S +G+ YG++
Sbjct: 143 LTKHGG--------YSIPSVDALPDLHGPSTYGSTSNNRPASYGSSSNHLPQQSSLLRRP 194
Query: 231 LLRSITGPTEAEKPMIV---------------ELAVAAMEELMRMAQAGEPLWV 269
R + T KP+++ E+A A+ E+M + Q +W+
Sbjct: 195 FTRELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWI 248
>AT4G25530.1 | Symbols: FWA, HDG6 | FWA; DNA binding / protein
binding / protein homodimerization/ transcription factor
| chr4:13039312-13042242 FORWARD
Length = 686
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 18/221 (8%)
Query: 49 DDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 108
+DQD + +R HR T Q QE+E F+ E PHP ++QR EL + L + QVK WFQN
Sbjct: 34 NDQDGG---RMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQN 90
Query: 109 KRTQMKAQHERTENSILKSENEKLRAENSRYKEALGNASCPNCGGPAALGEMSFDEQHLR 168
KR K ++ EN L+ E+++L A + + A+ + C CG G+ ++ Q L
Sbjct: 91 KRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLM 150
Query: 169 IENARLREEIDRISGIAAKYVGKXXXXXXXXXXXXXXXXXDLGVSNFGAQPGFVGEMYGA 228
ENA L EID+ + ++Y+ + G++ A P V + G
Sbjct: 151 AENANLEREIDQFN---SRYLSHPKQRMVSTSEQAPSSSSNPGIN---ATP--VLDFSGG 202
Query: 229 TDLLRSITGPTEAEKPMIVELAVAAMEELMRMAQAGEPLWV 269
T +E E + + LA+ A+ EL+ + + P W+
Sbjct: 203 TR-------TSEKETSIFLNLAITALRELITLGEVDCPFWM 236
>AT1G30490.1 | Symbols: PHV, ATHB9 | PHV (PHAVOLUTA); DNA binding /
protein binding / transcription factor |
chr1:10796328-10800744 REVERSE
Length = 841
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 47 SGDDQD-PNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRE----LGLEPLQ 101
S DD+D P++ +Y R+T Q++ +E + ECP P +R++L RE +EP Q
Sbjct: 6 SMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQ 65
Query: 102 VKFWFQNKRTQMKAQHE----RTENSILKSENEKLRAENSRYKEALGN 145
+K WFQN+R + K + E +T N L + N+ L EN R ++ + N
Sbjct: 66 IKVWFQNRRCREKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSN 113
>AT5G60690.1 | Symbols: REV, IFL, IFL1 | REV (REVOLUTA); DNA binding
/ lipid binding / transcription factor |
chr5:24397734-24401933 FORWARD
Length = 842
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELG----LEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + ECP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK-- 82
Query: 117 HERTENSILKSENEKLRA-------ENSRYKEALGNASCPN 150
+R E S L+S N KL A EN R ++ + C N
Sbjct: 83 -QRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCEN 122
>AT2G34710.1 | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | PHB
(PHABULOSA); DNA binding / transcription factor |
chr2:14639548-14643993 REVERSE
Length = 852
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 51 QDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWF 106
+ P++ +Y R+T Q++ +E + ECP P +R++L RE +EP Q+K WF
Sbjct: 15 ESPDKGLDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWF 74
Query: 107 QNKRTQMKAQHE----RTENSILKSENEKLRAENSRYKEALGN 145
QN+R + K + E +T N L + N+ L EN R ++ + N
Sbjct: 75 QNRRCREKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSN 117
>AT4G32880.1 | Symbols: ATHB-8, ATHB8 | ATHB-8 (HOMEOBOX GENE 8);
DNA binding / transcription factor |
chr4:15863587-15867822 REVERSE
Length = 833
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 15 KYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 72
Query: 117 HERTENSILKSENEKLRAENSRYKE 141
+R E S L++ N KL A N E
Sbjct: 73 -QRKEASRLQAVNRKLTAMNKLLME 96
>AT1G52150.2 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA
binding / transcription factor | chr1:19409913-19413961
REVERSE
Length = 837
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 117 HERTENSILKSENEKLRAENSRYKE 141
+R E S L++ N KL A N E
Sbjct: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
>AT1G52150.3 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA
binding / transcription factor | chr1:19410118-19413961
REVERSE
Length = 794
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 117 HERTENSILKSENEKLRAENSRYKE 141
+R E S L++ N KL A N E
Sbjct: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
>AT1G52150.1 | Symbols: ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA
binding / transcription factor | chr1:19409913-19413961
REVERSE
Length = 836
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 61 RYHRHTQRQIQEMEAFFKECPHPDDKQRKELSREL----GLEPLQVKFWFQNKRTQMKAQ 116
+Y R+T Q++ +E + +CP P +R++L RE +EP Q+K WFQN+R + K
Sbjct: 17 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 74
Query: 117 HERTENSILKSENEKLRAENSRYKE 141
+R E S L++ N KL A N E
Sbjct: 75 -QRKEASRLQAVNRKLTAMNKLLME 98
>AT2G46680.1 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS THALIANA
HOMEOBOX 7); transcription activator/ transcription
factor | chr2:19165777-19166773 REVERSE
Length = 258
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 58 KKKRYHRHTQR-----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
KK ++++ QR QI+ +E F+ + +++ +L+RELGL+P QV WFQNKR +
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 113 MKAQHERTENSI--------------LKSENEKLRAENSRYKEALGNASCP---NCGGPA 155
K++ TE +I LK E + L +E R KEA + C G
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQ 143
Query: 156 ALGEMS 161
A+ +S
Sbjct: 144 AVVALS 149
>AT4G37790.1 | Symbols: HAT22 | HAT22; transcription factor |
chr4:17768241-17769272 FORWARD
Length = 278
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 49 DDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 108
DD D + ++ R T++Q +E FK + KQ++ L+R+L L P QV+ WFQN
Sbjct: 114 DDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQN 173
Query: 109 KRTQMKAQHERTENSILKSENEKLRAENSRYKEAL 143
+R + K + + LK E L EN R ++ L
Sbjct: 174 RRARTKLKQTEVDCEFLKKCCETLTDENRRLQKEL 208
>AT2G46680.2 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS THALIANA
HOMEOBOX 7); transcription activator/ transcription
factor | chr2:19165777-19166773 REVERSE
Length = 256
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 58 KKKRYHRHTQR-----QIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
KK ++++ QR QI+ +E F+ + +++ +L+RELGL+P QV WFQNKR +
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 113 MKAQHERTENSILKSENEKLRAE 135
K++ TE +IL+ + L ++
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQ 106
>AT3G01470.1 | Symbols: ATHB-1, ATHB1, HD-ZIP-1, HAT5 | ATHB-1
(ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein
homodimerization/ sequence-specific DNA binding /
transcription activator/ transcription factor |
chr3:182648-184034 REVERSE
Length = 272
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 55 QRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
Q P+KKR R T Q+ +E F+ + +++ +L+++LGL+P QV WFQN+R + K
Sbjct: 64 QLPEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 121
Query: 115 AQHERTENSILKS--------------ENEKLRAENSRYKEAL 143
+ + +LKS +N+KLR+E + E L
Sbjct: 122 TKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164
>AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding / transcription
factor | chr2:9704949-9706048 REVERSE
Length = 274
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 64 RHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENS 123
R T++Q +E FK+ + KQ++ L+R+L L P QV+ WFQN+R + K + +
Sbjct: 116 RLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCE 175
Query: 124 ILKSENEKLRAENSRYKEAL 143
LK E L EN R ++ +
Sbjct: 176 FLKKCCETLADENIRLQKEI 195
>AT5G03790.1 | Symbols: ATHB51, LMI1, HB51 | HB51; DNA binding /
sequence-specific DNA binding / transcription factor |
chr5:1004985-1006373 FORWARD
Length = 235
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 53 PNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQ 112
PN + + R T Q+ +E F+E D ++ +LSRELGL+P Q+ WFQN+R +
Sbjct: 69 PNNNNEMIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRAR 128
Query: 113 MKAQH 117
KA+
Sbjct: 129 WKAKQ 133
>AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS
THALIANA); DNA binding / transcription factor |
chr5:2068305-2070284 REVERSE
Length = 336
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 31 DDDCETKSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKE 90
DD+ E + + E D+ D N +KK R ++ Q +E FKE + KQ+
Sbjct: 166 DDEVERSASRASNE----DNDDENGSTRKK--LRLSKDQSAFLEDSFKEHSTLNPKQKIA 219
Query: 91 LSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRYKE 141
L+++L L P QV+ WFQN+R + K + + LK E L EN R ++
Sbjct: 220 LAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQK 270
>AT3G61890.1 | Symbols: ATHB-12, ATHB12 | ATHB-12 (ARABIDOPSIS
THALIANA HOMEOBOX 12); transcription activator/
transcription factor | chr3:22914346-22915239 REVERSE
Length = 235
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 43 TEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQV 102
+E SG + + K R ++ QI+ +E F+ + +++ +++RELGL+P QV
Sbjct: 12 SEISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQV 71
Query: 103 KFWFQNKRTQMKAQHERTENSILKSENEKLRAE 135
WFQNKR + K + E + L++ L ++
Sbjct: 72 AIWFQNKRARWKTKQLEKEYNTLRANYNNLASQ 104
>AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidopsis thaliana
homeobox-leucine zipper protein 18); DNA binding /
transcription factor | chr1:26736126-26738419 FORWARD
Length = 206
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 13 FDMSMTPKSSENELAKLKDDDCETKSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQE 72
FD++ TPK+ E D E G P ++ D N ++++ R T+ Q
Sbjct: 34 FDINQTPKTEE---------DREWMIGA----TPHVNEDDSNSGGRRRKKLRLTKEQSHL 80
Query: 73 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKL 132
+E F + KQ+K+L+ L L QV+ WFQN+R + K +H E LK L
Sbjct: 81 LEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSL 140
Query: 133 RAENSRYK------EALGNAS------CPNC 151
+ +N R + AL +S CP C
Sbjct: 141 KEQNRRLQIEVEELRALKPSSTSALTMCPRC 171
>AT1G69780.1 | Symbols: ATHB13 | ATHB13; DNA binding /
sequence-specific DNA binding / transcription factor |
chr1:26259166-26260465 FORWARD
Length = 294
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 34 CETKSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSR 93
C+ ++G D D +Q +KKR R Q++ +E F+ + +++ +L+R
Sbjct: 61 CDLETGNNMNGEEDYSD-DGSQMGEKKR--RLNMEQVKTLEKNFELGNKLEPERKMQLAR 117
Query: 94 ELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAEN 136
LGL+P Q+ WFQN+R + K + + LK + + L+AEN
Sbjct: 118 ALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAEN 160
>AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding / transcription
factor | chr4:9739862-9740983 FORWARD
Length = 282
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 32 DDCETKSGTETTEAPSGDDQDPNQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDKQRKEL 91
DD + ++ S +++D +K+ R ++ Q +E FKE + KQ+ L
Sbjct: 107 DDLDITLDRSSSRGTSDEEEDYGGETCRKKL-RLSKDQSAVLEDTFKEHNTLNPKQKLAL 165
Query: 92 SRELGLEPLQVKFWFQNKRTQMKAQHERTENSILKSENEKLRAENSRY-KEA 142
+++LGL QV+ WFQN+R + K + + LK EKL EN R KEA
Sbjct: 166 AKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEA 217