Jatropha Genome Database

JcCB0181751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0181751.10 + phase: 0 /partial
         (217 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzym...   283   7e-77
AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzym...   248   2e-66
AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzym...   243   5e-65
AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzym...   241   2e-64
AT2G13560.1 | Symbols:  | malate oxidoreductase, putative | chr2...   106   9e-24
AT4G00570.1 | Symbols:  | malate oxidoreductase, putative | chr4...    93   1e-19

>AT1G79750.1 | Symbols: ATNADP-ME4 | ATNADP-ME4 (NADP-malic enzyme
           4); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr1:30007655-30011179
           REVERSE
          Length = 646

 Score =  283 bits (723), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 135/212 (63%), Positives = 168/212 (79%), Gaps = 1/212 (0%)

Query: 7   SNTSISGSCSPFSGKQKGLVPTAPSTLKVVA-LNPNRDRNGSVVMESSLQEIRDGASVLD 65
           + T + G  +  S +Q   + T P++L+V + L  N+D  GSV++E++        +   
Sbjct: 11  NKTVVPGCSTRLSLRQPRTIITPPASLRVFSSLGSNQDPTGSVLIETTATSSSSLETSAA 70

Query: 66  FDSDKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDPHHNKGLAFNDKERNAH 125
               K+TV+GGV+DVYGED ATED  +TPWSLSVASGY+LLRDPHHNKGLAF+ +ER+AH
Sbjct: 71  DIVPKSTVSGGVQDVYGEDAATEDMPITPWSLSVASGYTLLRDPHHNKGLAFSHRERDAH 130

Query: 126 YLRGLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERNEKLFYKLLIEHVEEML 185
           YLRGLLPP V+SQ+LQVKK+MH +RQYQ PLQKYMAMMDLQE NE+LFYKLLI+HVEE+L
Sbjct: 131 YLRGLLPPTVISQDLQVKKIMHTLRQYQVPLQKYMAMMDLQETNERLFYKLLIDHVEELL 190

Query: 186 PIVYTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           P++YTPTVGEACQKYGSIF RPQGL+ISL EK
Sbjct: 191 PVIYTPTVGEACQKYGSIFLRPQGLFISLKEK 222


>AT5G11670.1 | Symbols: ATNADP-ME2 | ATNADP-ME2 (NADP-malic enzyme
           2); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:3754456-3758040
           FORWARD
          Length = 588

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 135/153 (88%)

Query: 65  DFDSDKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDPHHNKGLAFNDKERNA 124
           D   +++ V GG+ DVYGED+AT DQLVTPW  SVASGY+L+RDP +NKGLAF DKER+A
Sbjct: 12  DVADNRSGVGGGISDVYGEDSATLDQLVTPWVTSVASGYTLMRDPRYNKGLAFTDKERDA 71

Query: 125 HYLRGLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERNEKLFYKLLIEHVEEM 184
           HYL GLLPP ++SQ++Q +K+MH +RQY  PLQ+YMA+MDLQERNE+LFYKLLI++VEE+
Sbjct: 72  HYLTGLLPPVILSQDVQERKVMHNLRQYTVPLQRYMALMDLQERNERLFYKLLIDNVEEL 131

Query: 185 LPIVYTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           LP+VYTPTVGEACQKYGSIF +PQGLYISLNEK
Sbjct: 132 LPVVYTPTVGEACQKYGSIFRKPQGLYISLNEK 164


>AT5G25880.1 | Symbols: ATNADP-ME3 | ATNADP-ME3 (NADP-malic enzyme
           3); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr5:9024549-9028260
           FORWARD
          Length = 588

 Score =  243 bits (621), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 132/149 (88%)

Query: 69  DKATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDPHHNKGLAFNDKERNAHYLR 128
           + + V GG+ DVYGED+AT DQLVTPW  SVASGY+L+RDP +NKGLAF DKER+AHY+ 
Sbjct: 16  NSSGVGGGISDVYGEDSATLDQLVTPWVTSVASGYTLMRDPRYNKGLAFTDKERDAHYIT 75

Query: 129 GLLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIV 188
           GLLPP V+SQ++Q +K+MH +RQY  PLQ+YMA+MDLQERNE+LFYKLLI++VEE+LP+V
Sbjct: 76  GLLPPVVLSQDVQERKVMHNLRQYTVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVV 135

Query: 189 YTPTVGEACQKYGSIFGRPQGLYISLNEK 217
           YTPTVGEACQKYGSI+ RPQGLYISL EK
Sbjct: 136 YTPTVGEACQKYGSIYRRPQGLYISLKEK 164


>AT2G19900.1 | Symbols: ATNADP-ME1 | ATNADP-ME1 (NADP-malic enzyme
           1); malate dehydrogenase (oxaloacetate-decarboxylating)
           (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or
           NADPH, NAD or NADP as acceptor | chr2:8592106-8595403
           REVERSE
          Length = 581

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 109/148 (73%), Positives = 133/148 (89%)

Query: 70  KATVTGGVRDVYGEDTATEDQLVTPWSLSVASGYSLLRDPHHNKGLAFNDKERNAHYLRG 129
           K++V GGV DVYGED+AT +  +TPWSLSV+SGYSLLRDP +NKGLAF +KER+ HYLRG
Sbjct: 10  KSSVDGGVVDVYGEDSATIEHNITPWSLSVSSGYSLLRDPRYNKGLAFTEKERDTHYLRG 69

Query: 130 LLPPAVVSQELQVKKMMHIIRQYQFPLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIVY 189
           LLPP V+ Q+LQ K++++ IRQYQFPLQKYMA+ +LQERNE+LFYKLLI++VEE+LPIVY
Sbjct: 70  LLPPVVLDQKLQEKRLLNNIRQYQFPLQKYMALTELQERNERLFYKLLIDNVEELLPIVY 129

Query: 190 TPTVGEACQKYGSIFGRPQGLYISLNEK 217
           TPTVGEACQK+GSIF RPQGL+ISL +K
Sbjct: 130 TPTVGEACQKFGSIFRRPQGLFISLKDK 157


>AT2G13560.1 | Symbols:  | malate oxidoreductase, putative |
           chr2:5650089-5655103 FORWARD
          Length = 623

 Score =  106 bits (265), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 10/126 (7%)

Query: 102 GYSLLRDPHHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQ-------- 153
           G  +L DP  NKG AF   ERN   LRGLLPP V+  E Q+ + M  +++ +        
Sbjct: 46  GLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQARDGPS 105

Query: 154 --FPLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLY 211
               L K+  +  L +RNE ++YK+LI ++EE  PIVYTPTVG  CQ Y  +F RP+G+Y
Sbjct: 106 DPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMY 165

Query: 212 ISLNEK 217
            S  ++
Sbjct: 166 FSAEDR 171


>AT4G00570.1 | Symbols:  | malate oxidoreductase, putative |
           chr4:242817-246522 REVERSE
          Length = 607

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 10/126 (7%)

Query: 102 GYSLLRDPHHNKGLAFNDKERNAHYLRGLLPPAVVSQELQVKKMMHIIRQYQ-------- 153
           G  +L DP  NK   F   ER+   +RGLLPP V++   Q  + +   R  +        
Sbjct: 39  GADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVMTCVQQCDRFIESFRSLENNTKGEPE 98

Query: 154 --FPLQKYMAMMDLQERNEKLFYKLLIEHVEEMLPIVYTPTVGEACQKYGSIFGRPQGLY 211
               L K+  +  L +RNE L+Y++LI+++++  PI+YTPTVG  CQ Y  ++ RP+G+Y
Sbjct: 99  NVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGMY 158

Query: 212 ISLNEK 217
            S  +K
Sbjct: 159 FSAKDK 164