Jatropha Genome Database

JcCB0180631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0180631.10 - phase: 1 /TE
         (667 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   105   1e-22

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 28/185 (15%)

Query: 426 EPESFEEAIENEHKRNWIEAMQDEMKSLHEDETFEXXXXXXXXXXXXXXWVFSIKQEEHS 485
           EP ++ EA E      W  AM DE+ ++    T+E              WV+ IK     
Sbjct: 85  EPSTYNEAKE---FLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141

Query: 486 SQPQFKARLVVK-------------------MTSIRTVLGMATSFELEIEQMDGKTTFLN 526
           +  ++KARLV K                   +TS++ +L ++  +   + Q+D    FLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201

Query: 527 GDLEEEIYMELPEDFVEKE------DCVCKLKKSLYGLKQALRQWYKKFESVMGEQGYRK 580
           GDL+EEIYM+LP  +  ++      + VC LKKS+YGLKQA RQW+ KF   +   G+ +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261

Query: 581 TTSDH 585
           + SDH
Sbjct: 262 SHSDH 266