Jatropha Genome Database
- JcCB0176301.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0176301.20 + phase: 0
(136 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38880.3 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 186 4e-48
AT3G53340.1 | Symbols: NF-YB10 | NF-YB10 (NUCLEAR FACTOR Y, SUBU... 186 4e-48
AT2G38880.5 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 185 8e-48
AT2G38880.1 | Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 | N... 185 8e-48
AT2G38880.2 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 185 8e-48
AT2G38880.6 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 184 1e-47
AT2G38880.4 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNI... 184 1e-47
AT4G14540.1 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNI... 183 3e-47
AT2G37060.3 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 183 4e-47
AT2G37060.2 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 183 4e-47
AT2G37060.1 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNI... 183 4e-47
AT5G47640.1 | Symbols: NF-YB2 | NF-YB2 (NUCLEAR FACTOR Y, SUBUNI... 174 1e-44
AT2G13570.1 | Symbols: NF-YB7 | NF-YB7 (NUCLEAR FACTOR Y, SUBUNI... 168 1e-42
AT2G47810.1 | Symbols: NF-YB5 | NF-YB5 (NUCLEAR FACTOR Y, SUBUNI... 149 7e-37
AT5G47670.1 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNI... 146 3e-36
AT5G47670.2 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNI... 146 4e-36
AT1G21970.1 | Symbols: LEC1, EMB 212, EMB212, NF-YB9 | LEC1 (LEA... 145 5e-36
AT1G09030.1 | Symbols: NF-YB4 | NF-YB4 (NUCLEAR FACTOR Y, SUBUNI... 132 7e-32
AT5G08190.1 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBU... 72 1e-13
AT5G08190.2 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBU... 72 1e-13
AT5G23090.4 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 71 2e-13
AT5G23090.1 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 71 2e-13
AT5G23090.2 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 71 2e-13
AT5G23090.3 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBU... 58 1e-09
AT2G27470.1 | Symbols: NF-YB11 | NF-YB11 (NUCLEAR FACTOR Y, SUBU... 47 4e-06
>AT2G38880.3 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240225
FORWARD
Length = 140
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYRE+
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT3G53340.1 | Symbols: NF-YB10 | NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT
B10); transcription factor | chr3:19774667-19775991
REVERSE
Length = 176
Score = 186 bits (472), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 90/94 (95%)
Query: 27 NFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKR 86
N REQDR+LPIANISRIMK+ LP NGKIAKDAKET+QECVSEFISF+TSEASDKCQREKR
Sbjct: 26 NVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKR 85
Query: 87 KTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
KTINGDDLLWAMATLGFEDYIDPLK+YL RYRE+
Sbjct: 86 KTINGDDLLWAMATLGFEDYIDPLKVYLMRYREM 119
>AT2G38880.5 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240316
FORWARD
Length = 141
Score = 185 bits (469), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYRE+
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.1 | Symbols: ATNF-YB1, HAP3, ATHAP3, HAP3A, NF-YB1 |
NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription
factor | chr2:16238685-16240316 FORWARD
Length = 141
Score = 185 bits (469), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYRE+
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.2 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240316
FORWARD
Length = 141
Score = 185 bits (469), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/97 (86%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYRE+
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREL 111
>AT2G38880.6 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240143
FORWARD
Length = 112
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYREV
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT2G38880.4 | Symbols: NF-YB1 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT
B1); transcription factor | chr2:16238685-16240143
FORWARD
Length = 112
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 92/97 (94%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
S + REQDRYLPIANISRIMKKALP NGKI KDAK+TVQECVSEFISFITSEASDKCQ+
Sbjct: 15 SGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQK 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKT+NGDDLLWAMATLGFEDY++PLKIYL+RYREV
Sbjct: 75 EKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREV 111
>AT4G14540.1 | Symbols: NF-YB3 | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT
B3); transcription factor | chr4:8344663-8345148 FORWARD
Length = 161
Score = 183 bits (465), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 82/97 (84%), Positives = 91/97 (93%)
Query: 24 SNSNFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQR 83
N++ REQDR+LPIAN+SRIMKKALPAN KI+KDAKETVQECVSEFISFIT EASDKCQR
Sbjct: 15 GNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQR 74
Query: 84 EKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
EKRKTINGDDLLWAM TLGFEDY++PLK+YL +YREV
Sbjct: 75 EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREV 111
>AT2G37060.3 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 90/94 (95%)
Query: 27 NFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKR 86
+ REQDR+LPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKR
Sbjct: 27 HVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKR 86
Query: 87 KTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
KTINGDDLLWAMATLGFEDY++PLK+YL RYRE+
Sbjct: 87 KTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT2G37060.2 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 90/94 (95%)
Query: 27 NFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKR 86
+ REQDR+LPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKR
Sbjct: 27 HVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKR 86
Query: 87 KTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
KTINGDDLLWAMATLGFEDY++PLK+YL RYRE+
Sbjct: 87 KTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT2G37060.1 | Symbols: NF-YB8 | NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT
B8); transcription factor | chr2:15576336-15577660
FORWARD
Length = 173
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 90/94 (95%)
Query: 27 NFREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKR 86
+ REQDR+LPIANISRIMK+ LPANGKIAKDAKE VQECVSEFISF+TSEASDKCQREKR
Sbjct: 27 HVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKR 86
Query: 87 KTINGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
KTINGDDLLWAMATLGFEDY++PLK+YL RYRE+
Sbjct: 87 KTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
>AT5G47640.1 | Symbols: NF-YB2 | NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT
B2); transcription factor | chr5:19309414-19309986
FORWARD
Length = 190
Score = 174 bits (442), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 88/92 (95%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
REQDR+LPIAN+SRIMKKALPAN KI+KDAKET+QECVSEFISF+T EASDKCQ+EKRKT
Sbjct: 26 REQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKT 85
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
INGDDLLWAM TLGFEDY++PLK+YL R+RE+
Sbjct: 86 INGDDLLWAMTTLGFEDYVEPLKVYLQRFREI 117
>AT2G13570.1 | Symbols: NF-YB7 | NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT
B7); transcription factor | chr2:5655842-5656489 REVERSE
Length = 215
Score = 168 bits (425), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 84/92 (91%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
+EQDR+LPIAN+ RIMKK LP NGKI+KDAKETVQECVSEFISF+T EASDKCQREKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
INGDD++WA+ TLGFEDY+ PLK+YL +YR+
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDT 126
>AT2G47810.1 | Symbols: NF-YB5 | NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT
B5); transcription factor | chr2:19582938-19583420
REVERSE
Length = 160
Score = 149 bits (375), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 76/90 (84%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
+EQDR LPIAN+ RIMK LPAN K++K+AKET+QECVSEFISF+T EASDKC +EKRKT
Sbjct: 50 KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYR 118
+NGDD+ WAMA LGF+DY LK YL RYR
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLHRYR 139
>AT5G47670.1 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT
B6); transcription activator/ transcription activator
binding / transcription factor | chr5:19315061-19315975
FORWARD
Length = 234
Score = 146 bits (369), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 82/92 (89%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
REQDR++PIAN+ RIM++ LPA+ KI+ D+KET+QECVSE+ISFIT EA+++CQRE+RKT
Sbjct: 57 REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT 116
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
I +D+LWAM+ LGF+DYI+PL +YL RYRE+
Sbjct: 117 ITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL 148
>AT5G47670.2 | Symbols: NF-YB6 | NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT
B6); transcription activator/ transcription activator
binding / transcription factor | chr5:19315358-19315975
FORWARD
Length = 205
Score = 146 bits (369), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 82/92 (89%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
REQDR++PIAN+ RIM++ LPA+ KI+ D+KET+QECVSE+ISFIT EA+++CQRE+RKT
Sbjct: 28 REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT 87
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
I +D+LWAM+ LGF+DYI+PL +YL RYRE+
Sbjct: 88 ITAEDVLWAMSKLGFDDYIEPLTLYLHRYREL 119
>AT1G21970.1 | Symbols: LEC1, EMB 212, EMB212, NF-YB9 | LEC1 (LEAFY
COTYLEDON 1); transcription activator/ transcription
factor | chr1:7727750-7729571 REVERSE
Length = 238
Score = 145 bits (367), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 83/92 (90%)
Query: 29 REQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKT 88
REQD+Y+PIAN+ RIM+K LP++ KI+ DAKET+QECVSE+ISF+T EA+++CQRE+RKT
Sbjct: 58 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 117
Query: 89 INGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
I +D+LWAM+ LGF++Y+DPL ++++RYRE+
Sbjct: 118 ITAEDILWAMSKLGFDNYVDPLTVFINRYREI 149
>AT1G09030.1 | Symbols: NF-YB4 | NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT
B4); transcription factor | chr1:2908611-2909030 REVERSE
Length = 139
Score = 132 bits (332), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 75/91 (82%)
Query: 30 EQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 89
++DR LPIAN+ R+MK+ LP+N KI+K+AK+TVQEC +EFISF+T EAS+KC RE RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 90 NGDDLLWAMATLGFEDYIDPLKIYLSRYREV 120
NGDD+ WA++TLG ++Y D + +L +YRE
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREA 93
>AT5G08190.1 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT
B12); DNA binding / transcription factor |
chr5:2636204-2637125 FORWARD
Length = 163
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 57/78 (73%)
Query: 31 QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
+D LP A +++I+K+ LPA+ ++A+DA++ + EC EFI+ I+SE+++ C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIA 71
Query: 91 GDDLLWAMATLGFEDYID 108
+ +L A+ LGF +Y++
Sbjct: 72 PEHVLKALQVLGFGEYVE 89
>AT5G08190.2 | Symbols: NF-YB12 | NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT
B12); DNA binding / transcription factor |
chr5:2636204-2637125 FORWARD
Length = 162
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 57/78 (73%)
Query: 31 QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
+D LP A +++I+K+ LPA+ ++A+DA++ + EC EFI+ I+SE+++ C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIA 71
Query: 91 GDDLLWAMATLGFEDYID 108
+ +L A+ LGF +Y++
Sbjct: 72 PEHVLKALQVLGFGEYVE 89
>AT5G23090.4 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 158
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 56/78 (71%)
Query: 31 QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
+D LP A +++I+K+ LP + ++A+DA++ + EC EFI+ ++SE++D C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 91 GDDLLWAMATLGFEDYID 108
+ +L A+ LGF +YI+
Sbjct: 72 PEHVLKALQVLGFGEYIE 89
>AT5G23090.1 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 159
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 56/78 (71%)
Query: 31 QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
+D LP A +++I+K+ LP + ++A+DA++ + EC EFI+ ++SE++D C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 91 GDDLLWAMATLGFEDYID 108
+ +L A+ LGF +YI+
Sbjct: 72 PEHVLKALQVLGFGEYIE 89
>AT5G23090.2 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 159
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 56/78 (71%)
Query: 31 QDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTIN 90
+D LP A +++I+K+ LP + ++A+DA++ + EC EFI+ ++SE++D C +E ++TI
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 91 GDDLLWAMATLGFEDYID 108
+ +L A+ LGF +YI+
Sbjct: 72 PEHVLKALQVLGFGEYIE 89
>AT5G23090.3 | Symbols: NF-YB13 | NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT
B13); transcription factor | chr5:7749391-7750203
FORWARD
Length = 146
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 45/62 (72%)
Query: 47 ALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDY 106
+LP + ++A+DA++ + EC EFI+ ++SE++D C +E ++TI + +L A+ LGF +Y
Sbjct: 15 SLPKDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLGFGEY 74
Query: 107 ID 108
I+
Sbjct: 75 IE 76
>AT2G27470.1 | Symbols: NF-YB11 | NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT
B11); transcription factor | chr2:11745196-11746375
REVERSE
Length = 275
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 35 LPIANISRIMKKALPA-----NGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 89
LP+A + R++KK L + I K+A E FI ++++ A+D C+ +R+T+
Sbjct: 11 LPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTM 70
Query: 90 NGDDLLWAMATLGFEDYIDPLKIYLSRY 117
DD+ A+ + F ++++PLK L +
Sbjct: 71 KADDVFKALEEMDFSEFLEPLKSSLEDF 98