Jatropha Genome Database

JcCB0174321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0174321.10 - phase: 0 /pseudo
         (367 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10050.1 | Symbols: OMR1 | OMR1 (L-O-METHYLTHREONINE RESISTAN...   416   e-116
AT4G11640.1 | Symbols: ATSR | ATSR (ARABIDOPSIS THALIANA SERINE ...   106   2e-23
AT3G61440.1 | Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | CYSC1 (CY...    54   1e-07

>AT3G10050.1 | Symbols: OMR1 | OMR1 (L-O-METHYLTHREONINE RESISTANT
           1); L-threonine ammonia-lyase | chr3:3099164-3101741
           REVERSE
          Length = 592

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/262 (76%), Positives = 223/262 (85%)

Query: 79  VSPNSLQYPSGYLGAVPDRTVQDVTNDIINAMGYLTSILSSKVYDVAIESPLQFAPKLSE 138
           VSPNSLQYP+GYLGAVP+RT +     I  AM YLT+ILS+KVYD+AIESPLQ A KLS+
Sbjct: 62  VSPNSLQYPAGYLGAVPERTNEAENGSIAEAMEYLTNILSTKVYDIAIESPLQLAKKLSK 121

Query: 139 RLGVKVWLKREDLQPVFSFKLRGAYNMMAKIPKEQLERGVICSSAGNHAQGVALAAKRLG 198
           RLGV+++LKREDLQPVFSFKLRGAYNMM K+P +QL +GVICSSAGNHAQGVAL+A +LG
Sbjct: 122 RLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSASKLG 181

Query: 199 CNAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAYAKKRAKEEDRTFIPPFDHPDV 258
           C AVI MPVTTPEIKWQ+VE LGATVVL GDSYD+AQA+AK RA+EE  TFIPPFDHPDV
Sbjct: 182 CTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIPPFDHPDV 241

Query: 259 IMGQGTVGMEIVRQMQAPLHAIFVPXXXXXXXXXXXXYVKRVNPEVKIIGVEPSDANAMA 318
           I GQGTVGMEI RQ + PLHAIFVP            YVKRV+PEVKIIGVEP+DANAMA
Sbjct: 242 IAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPADANAMA 301

Query: 319 LSLHHGERVMLDHVGGFADGVA 340
           LSLHHGERV+LD VGGFADGVA
Sbjct: 302 LSLHHGERVILDQVGGFADGVA 323


>AT4G11640.1 | Symbols: ATSR | ATSR (ARABIDOPSIS THALIANA SERINE
           RACEMASE); serine racemase | chr4:7021770-7023252
           FORWARD
          Length = 331

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 1/212 (0%)

Query: 128 SPLQFAPKLSERLGVKVWLKREDLQPVFSFKLRGAYNMMAKIPKEQLERGVICSSAGNHA 187
           +P+  +  L+   G  ++ K E LQ   +FK RGA N +  +  EQ  +GV+  S+GNHA
Sbjct: 29  TPVLTSESLNSISGRSLFFKCECLQKGGAFKFRGACNAVLSLDAEQAAKGVVTHSSGNHA 88

Query: 188 QGVALAAKRLGCNAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAYAKKRAKEEDR 247
             ++LAAK  G  A I +P   P+ K  +V R G  V+    +    +  A K  +E   
Sbjct: 89  AALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRYGGKVIWSEATMSSREEIASKVLQETGS 148

Query: 248 TFIPPFDHPDVIMGQGTVGMEIVRQMQAPLHAIFVPXXXXXXXXXXXXYVKRVNPEVKII 307
             I P++   +I GQGT+ +E++ Q+Q  + AI VP              K + P ++II
Sbjct: 149 VLIHPYNDGRIISGQGTIALELLEQIQ-EIDAIVVPISGGGLISGVALAAKSIKPSIRII 207

Query: 308 GVEPSDANAMALSLHHGERVMLDHVGGFADGV 339
             EP  A+  A S   G+ + L      ADG+
Sbjct: 208 AAEPKGADDAAQSKVAGKIITLPVTNTIADGL 239


>AT3G61440.1 | Symbols: ATCYSC1, ARATH;BSAS3;1, CYSC1 | CYSC1
           (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/
           cysteine synthase | chr3:22735885-22737792 FORWARD
          Length = 368

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 24/207 (11%)

Query: 127 ESPLQFAPKLSERLGVKVWLKREDLQPVFSFKLRGAYNMMAKIPKEQL----ERGVICSS 182
           ++PL F  K++E     V  K+E  QP  S K R A  M+A   K++L    +  +I  +
Sbjct: 59  KTPLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIPGKTTLIEPT 118

Query: 183 AGNHAQGVALAAKRLGCNAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAYAKKRA 242
           +GN    +A  A   G   ++ MP  T   +  ++   GA +VL  D         KK  
Sbjct: 119 SGNMGISLAFMAAMKGYRIIMTMPSYTSLERRVTMRSFGAELVLT-DPAKGMGGTVKKAY 177

Query: 243 KEEDRTFIPPFDHPDVIMGQ------------GTVGMEIVRQMQAPLHAIFVPXXXXXXX 290
              D T       PD  M Q             T G EI       +    +        
Sbjct: 178 DLLDST-------PDAFMCQQFANPANTQIHFDTTGPEIWEDTLGNVDIFVMGIGSGGTV 230

Query: 291 XXXXXYVKRVNPEVKIIGVEPSDANAM 317
                Y+K  NP VKI GVEP+++N +
Sbjct: 231 SGVGRYLKSKNPNVKIYGVEPAESNIL 257