Jatropha Genome Database

JcCB0174101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0174101.20 + phase: 0 /partial
         (226 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16580.1 | Symbols:  | catalytic | chr4:9341152-9342555 REVERSE    205   2e-53
AT5G66720.2 | Symbols:  | 5-azacytidine resistance protein -rela...   189   9e-49
AT5G66720.1 | Symbols:  | 5-azacytidine resistance protein -rela...   189   1e-48
AT2G30170.1 | Symbols:  | catalytic | chr2:12879802-12881474 REV...   110   6e-25
AT4G33500.1 | Symbols:  | protein phosphatase 2C-related / PP2C-...   110   9e-25
AT2G30170.2 | Symbols:  | catalytic | chr2:12879802-12881046 REV...    98   4e-21

>AT4G16580.1 | Symbols:  | catalytic | chr4:9341152-9342555 REVERSE
          Length = 467

 Score =  205 bits (521), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 135/189 (71%), Gaps = 2/189 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           + LK+ +G+ YLP  DKE   GEDAHFIC E+  +GVADGVGGWA  G+DAG Y+R LM 
Sbjct: 214 KPLKLVSGSCYLPHPDKEATGGEDAHFICAEEQALGVADGVGGWAELGIDAGYYSRELMS 273

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
           NS+ A+Q E KGS++P +VL++A++ T  +GSSTACII + +N  LH +NLGDSGF++ R
Sbjct: 274 NSVNAIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIAL-TNQGLHAINLGDSGFMVVR 332

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCSD-DLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           E   +++S VQQH+FN  YQL +  + DLP       + V  GD+++AGTDGL DN+Y +
Sbjct: 333 EGHTVFRSPVQQHDFNFTYQLESGRNGDLPSSGQVFTVAVAPGDVIIAGTDGLFDNLYNN 392

Query: 213 EITKILEKA 221
           EIT I+  A
Sbjct: 393 EITAIVVHA 401


>AT5G66720.2 | Symbols:  | 5-azacytidine resistance protein -related
           | chr5:26639015-26640545 REVERSE
          Length = 411

 Score =  189 bits (481), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 96/186 (51%), Positives = 131/186 (70%), Gaps = 3/186 (1%)

Query: 35  TLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLMEN 94
           +LK+ +G+ YLP  +KE   GEDAHFIC E+  IGVADGVGGWA  GV+AG+++R LM  
Sbjct: 164 SLKLVSGSCYLPHPEKEATGGEDAHFICDEEQAIGVADGVGGWAEVGVNAGLFSRELMSY 223

Query: 95  SIIALQGEKKG-SVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
           S+ A+Q + KG S++P  VL++A+S T  KGSSTACII +  +  LH +NLGDSGF + R
Sbjct: 224 SVSAIQEQHKGSSIDPLVVLEKAHSQTKAKGSSTACIIVLK-DKGLHAINLGDSGFTVVR 282

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTC-SDDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           E   +++S VQQH FN  YQL +  S D+P       I V++GD++VAGTDG+ DN+Y  
Sbjct: 283 EGTTVFQSPVQQHGFNFTYQLESGNSADVPSSGQVFTIDVQSGDVIVAGTDGVYDNLYNE 342

Query: 213 EITKIL 218
           EIT ++
Sbjct: 343 EITGVV 348


>AT5G66720.1 | Symbols:  | 5-azacytidine resistance protein -related
           | chr5:26639015-26640545 REVERSE
          Length = 414

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/187 (50%), Positives = 132/187 (70%), Gaps = 3/187 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           ++L++ +G+ YLP  +KE   GEDAHFIC E+  IGVADGVGGWA  GV+AG+++R LM 
Sbjct: 166 KSLRLVSGSCYLPHPEKEATGGEDAHFICDEEQAIGVADGVGGWAEVGVNAGLFSRELMS 225

Query: 94  NSIIALQGEKKG-SVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLF 152
            S+ A+Q + KG S++P  VL++A+S T  KGSSTACII +  +  LH +NLGDSGF + 
Sbjct: 226 YSVSAIQEQHKGSSIDPLVVLEKAHSQTKAKGSSTACIIVLK-DKGLHAINLGDSGFTVV 284

Query: 153 RENKYIYKSKVQQHEFNHPYQLGTC-SDDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYP 211
           RE   +++S VQQH FN  YQL +  S D+P       I V++GD++VAGTDG+ DN+Y 
Sbjct: 285 REGTTVFQSPVQQHGFNFTYQLESGNSADVPSSGQVFTIDVQSGDVIVAGTDGVYDNLYN 344

Query: 212 SEITKIL 218
            EIT ++
Sbjct: 345 EEITGVV 351


>AT2G30170.1 | Symbols:  | catalytic | chr2:12879802-12881474
           REVERSE
          Length = 298

 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 103/187 (55%), Gaps = 3/187 (1%)

Query: 36  LKMNAGAFYLPKDDKERPQGEDAHFICKEKL-TIGVADGVGGWARKGVDAGIYARRLMEN 94
           L ++ G   +P  DK    GEDA F+   +   + VADGV GWA + VD  ++++ LM N
Sbjct: 45  LSLSVGIHAIPHPDKVEKGGEDAFFVSSYRGGVMAVADGVSGWAEQDVDPSLFSKELMAN 104

Query: 95  SIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFRE 154
           +   L  +++   +P  ++ +A++ T  +GS+T  +  ++    L   N+GD G  L RE
Sbjct: 105 AS-RLVDDQEVRYDPGFLIDKAHTATTSRGSATIILAMLEEVGILKIGNVGDCGLKLLRE 163

Query: 155 NKYIYKSKVQQHEFNHPYQLGTCSDDLPCLAYEEKIL-VEAGDIVVAGTDGLLDNIYPSE 213
            + I+ +  Q+H F+ PYQL +       L     I+ V+ GD++V G+DGL DN++  E
Sbjct: 164 GQIIFATAPQEHYFDCPYQLSSEGSAQTYLDASFSIVEVQKGDVIVMGSDGLFDNVFDHE 223

Query: 214 ITKILEK 220
           I  I+ K
Sbjct: 224 IVSIVTK 230


>AT4G33500.1 | Symbols:  | protein phosphatase 2C-related /
           PP2C-related | chr4:16112835-16116243 REVERSE
          Length = 724

 Score =  110 bits (274), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 3/163 (1%)

Query: 56  EDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLMENSIIALQGEKKGSVNPRKVLQE 115
           EDA+FI      IG+ADGV  W+ +G++ G+YA+ LM N    +  E     +P +VL  
Sbjct: 499 EDAYFISHHNW-IGIADGVSQWSFEGINKGMYAQELMSNCEKIISNETAKISDPVQVLHR 557

Query: 116 AYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFRENKYIYKSKVQQHEFNHPYQLG 175
           + + T   GSSTA I  +D NN LH  N+GDSGF++ R+   +  S    H F  P  + 
Sbjct: 558 SVNETKSSGSSTALIAHLD-NNELHIANIGDSGFMVIRDGTVLQNSSPMFHHFCFPLHIT 616

Query: 176 TCSDDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPSEITKIL 218
              D L  LA    + +E GD+V+A TDGL DN+Y  EI  I+
Sbjct: 617 QGCDVLK-LAEVYHVNLEEGDVVIAATDGLFDNLYEKEIVSIV 658


>AT2G30170.2 | Symbols:  | catalytic | chr2:12879802-12881046
           REVERSE
          Length = 221

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 2/154 (1%)

Query: 68  IGVADGVGGWARKGVDAGIYARRLMENSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSST 127
           + VADGV GWA + VD  ++++ LM N+   L  +++   +P  ++ +A++ T  +GS+T
Sbjct: 1   MAVADGVSGWAEQDVDPSLFSKELMANAS-RLVDDQEVRYDPGFLIDKAHTATTSRGSAT 59

Query: 128 ACIITIDSNNCLHYVNLGDSGFLLFRENKYIYKSKVQQHEFNHPYQLGTCSDDLPCLAYE 187
             +  ++    L   N+GD G  L RE + I+ +  Q+H F+ PYQL +       L   
Sbjct: 60  IILAMLEEVGILKIGNVGDCGLKLLREGQIIFATAPQEHYFDCPYQLSSEGSAQTYLDAS 119

Query: 188 EKIL-VEAGDIVVAGTDGLLDNIYPSEITKILEK 220
             I+ V+ GD++V G+DGL DN++  EI  I+ K
Sbjct: 120 FSIVEVQKGDVIVMGSDGLFDNVFDHEIVSIVTK 153