Jatropha Genome Database

JcCB0173711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0173711.10 + phase: 2 /partial
         (174 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ fam...   207   3e-54
AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ fam...   206   4e-54

>AT2G37500.2 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742430 REVERSE
          Length = 409

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 110/154 (71%)

Query: 21  QLQACLDAVMQALAKSVAWDGEGATCLIEVTVTGAESEVKAAKIXXXXXXXXXXXXXXYG 80
           QLQACLDAVMQ LAKS+AWDGEGATCLIEVTV G E+E +AAKI              YG
Sbjct: 256 QLQACLDAVMQGLAKSIAWDGEGATCLIEVTVKGTETEAEAAKIARSVASSSLVKAAVYG 315

Query: 81  RDPNWGRXXXXXXXXXXPFHQNNLRVMLGDILLMDNGQPLAFDRAAASNYLRKAGETHGT 140
           RDPNWGR           F  + L++ LG+  LM++GQPL FDR  ASNYL+K GE HGT
Sbjct: 316 RDPNWGRIAAAAGYAGVSFQMDKLKISLGEFSLMESGQPLPFDRDGASNYLKKTGEVHGT 375

Query: 141 VGIYISVGDGSGHGQAWGCDLSYDYVKINAEYTT 174
           V I ISVGDG+  G+AWGCDLSYDYVKINAEYT+
Sbjct: 376 VTIDISVGDGAAIGKAWGCDLSYDYVKINAEYTS 409


>AT2G37500.1 | Symbols:  | arginine biosynthesis protein ArgJ family
           | chr2:15739904-15742689 REVERSE
          Length = 468

 Score =  206 bits (525), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 110/154 (71%)

Query: 21  QLQACLDAVMQALAKSVAWDGEGATCLIEVTVTGAESEVKAAKIXXXXXXXXXXXXXXYG 80
           QLQACLDAVMQ LAKS+AWDGEGATCLIEVTV G E+E +AAKI              YG
Sbjct: 315 QLQACLDAVMQGLAKSIAWDGEGATCLIEVTVKGTETEAEAAKIARSVASSSLVKAAVYG 374

Query: 81  RDPNWGRXXXXXXXXXXPFHQNNLRVMLGDILLMDNGQPLAFDRAAASNYLRKAGETHGT 140
           RDPNWGR           F  + L++ LG+  LM++GQPL FDR  ASNYL+K GE HGT
Sbjct: 375 RDPNWGRIAAAAGYAGVSFQMDKLKISLGEFSLMESGQPLPFDRDGASNYLKKTGEVHGT 434

Query: 141 VGIYISVGDGSGHGQAWGCDLSYDYVKINAEYTT 174
           V I ISVGDG+  G+AWGCDLSYDYVKINAEYT+
Sbjct: 435 VTIDISVGDGAAIGKAWGCDLSYDYVKINAEYTS 468