Jatropha Genome Database

JcCB0173361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0173361.10 + phase: 0 
         (191 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2); c...   345   1e-95
AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3); c...   343   5e-95
AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   342   6e-95
AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative | chr...   342   1e-94

>AT5G54960.1 | Symbols: PDC2 | PDC2 (pyruvate decarboxylase-2);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding |
           chr5:22310858-22312681 REVERSE
          Length = 607

 Score =  345 bits (885), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 160/189 (84%), Positives = 172/189 (91%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           + MLS ++AV+AETGDSWFNCQKL+LPE CGYEFQMQYGSIGWSVGATLGYAQA   +RV
Sbjct: 419 QNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAMPNRRV 478

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           IACIGDGSFQVTAQD+STMIR GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YT  V 
Sbjct: 479 IACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTAFVE 538

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWTAKVR EE+L +AI TAT E+K S CFIEV+VHKDDTSKELLEWGSRVSA
Sbjct: 539 AIHNGEGKCWTAKVRCEEELVKAINTATNEEKESFCFIEVIVHKDDTSKELLEWGSRVSA 598

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 599 ANSRPPNPQ 607


>AT5G01330.1 | Symbols: PDC3 | PDC3 (pyruvate decarboxylase-3);
           carboxy-lyase/ catalytic/ magnesium ion binding /
           pyruvate decarboxylase/ thiamin pyrophosphate binding /
           transferase | chr5:132538-134807 REVERSE
          Length = 592

 Score =  343 bits (879), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 174/189 (92%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 404 QKMLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRV 463

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           ++ IGDGSFQVTAQD+STMIR GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 464 LSFIGDGSFQVTAQDVSTMIRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 523

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWT KVR EE+L EAI TAT E+K SLCFIEV+VHKDDTSKELLEWGSRVSA
Sbjct: 524 AIHNGEGKCWTTKVRYEEELVEAINTATLEKKDSLCFIEVIVHKDDTSKELLEWGSRVSA 583

Query: 183 ANSRPPNPQ 191
           AN RPPNPQ
Sbjct: 584 ANGRPPNPQ 592


>AT5G01320.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr5:129484-131625 REVERSE
          Length = 603

 Score =  342 bits (878), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 173/189 (91%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA   KRV
Sbjct: 415 QKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQATPEKRV 474

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           ++ IGDGSFQVTAQDISTMIR GQK IIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 475 LSFIGDGSFQVTAQDISTMIRNGQKAIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 534

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EGKCWT KVR EE+L EAI TAT E+K SLCFIEV+VHKDDTSKELLEWGSRVSA
Sbjct: 535 AIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEWGSRVSA 594

Query: 183 ANSRPPNPQ 191
           AN RPPNPQ
Sbjct: 595 ANGRPPNPQ 603


>AT4G33070.1 | Symbols:  | pyruvate decarboxylase, putative |
           chr4:15952519-15954676 REVERSE
          Length = 607

 Score =  342 bits (876), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 160/189 (84%), Positives = 174/189 (92%)

Query: 3   KEMLSGDTAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIGWSVGATLGYAQAARTKRV 62
           ++MLS +TAVIAETGDSWFNCQKL+LP+ CGYEFQMQYGSIGWSVGATLGYAQA+  KRV
Sbjct: 419 QKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQASPEKRV 478

Query: 63  IACIGDGSFQVTAQDISTMIRLGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLVN 122
           +A IGDGSFQVT QDISTM+R GQKTIIFLINNGGYTIEVEIHDGPYNVIKNW+YTGLV+
Sbjct: 479 LAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVD 538

Query: 123 AIHNDEGKCWTAKVRTEEQLREAIATATGEQKGSLCFIEVLVHKDDTSKELLEWGSRVSA 182
           AIHN EG CWTAKVR EE+L EAI TAT E+K  LCFIEV++HKDDTSKELLEWGSRVSA
Sbjct: 539 AIHNGEGNCWTAKVRYEEELVEAITTATTEKKDCLCFIEVILHKDDTSKELLEWGSRVSA 598

Query: 183 ANSRPPNPQ 191
           ANSRPPNPQ
Sbjct: 599 ANSRPPNPQ 607