Jatropha Genome Database

JcCB0170441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0170441.10 + phase: 0 /partial
         (284 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24040.1 | Symbols: ATTRE1, TRE1 | TRE1 (TREHALASE 1); alpha,...   315   2e-86

>AT4G24040.1 | Symbols: ATTRE1, TRE1 | TRE1 (TREHALASE 1);
           alpha,alpha-trehalase/ trehalase |
           chr4:12488242-12491060 FORWARD
          Length = 626

 Score =  315 bits (806), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/275 (57%), Positives = 197/275 (71%), Gaps = 4/275 (1%)

Query: 14  GPVIPTTPLITFLERVQETALDTFGKKGF-DPKLYVDLSLK--FNLSTTEKAFDGLPRNE 70
           GPV+ TT L+TFL+RVQ TAL ++ KK   DPK Y+DLSLK  ++LST E AFD L    
Sbjct: 72  GPVVATTKLVTFLQRVQHTALRSYPKKQTPDPKSYIDLSLKRPYSLSTIESAFDDLTSES 131

Query: 71  NGN-VLVKDLEEFIATYFEDEGDDLVYYDPPDFVPEPDGFLPEVENLEVREWALKVHSLW 129
           +   V V+ LE+F+  YF+  G+DL++++P DFV +P GFL  VEN EVREWA +VH LW
Sbjct: 132 HDQPVPVETLEKFVKEYFDGAGEDLLHHEPVDFVSDPSGFLSNVENEEVREWAREVHGLW 191

Query: 130 KNLSRKISGEVLKQXXXXXXXXXXXXMIVPGSRFREVYYWDSYWVIRGLLASKMYETAKS 189
           +NLS ++S  V +             +I+PGSRFREVYYWDSYWVI+GL+ S+M+ TAK 
Sbjct: 192 RNLSCRVSDSVRESADRHTLLPLPEPVIIPGSRFREVYYWDSYWVIKGLMTSQMFTTAKG 251

Query: 190 IVTNLISLVNKYGFALNGGRAYYTNRSEPPLLSAMVYEIYNRTGDMEXXXXXXXXXXXEH 249
           +VTNL+SLV  YG+ALNG RAYYTNRS+PPLLS+MVYEIYN T D E           E+
Sbjct: 252 LVTNLMSLVETYGYALNGARAYYTNRSQPPLLSSMVYEIYNVTKDEELVRKAIPLLLKEY 311

Query: 250 EFWNSEMHKVTIQDAQGSNHILSRYYAKWNKPRPE 284
           EFWNS  HKV I+DA G +H+LSRYYA WNKPRPE
Sbjct: 312 EFWNSGKHKVVIRDANGYDHVLSRYYAMWNKPRPE 346