Jatropha Genome Database
- JcCB0161621.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0161621.10 - phase: 0 /partial
(182 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L... 226 7e-60
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R... 226 8e-60
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 225 9e-60
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 224 3e-59
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 224 3e-59
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6... 222 1e-58
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB... 221 2e-58
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB... 216 8e-57
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP bi... 202 8e-53
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10 (RH... 198 2e-51
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ... 185 1e-47
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ... 184 4e-47
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 73 1e-13
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 72 1e-13
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; G... 70 5e-13
AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase ... 68 3e-12
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 | AT... 68 3e-12
AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS R... 68 3e-12
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP... 67 6e-12
AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPa... 67 7e-12
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; ... 66 1e-11
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ... 66 1e-11
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A | ... 64 4e-11
AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPa... 64 5e-11
AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPa... 64 6e-11
AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPa... 64 7e-11
AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPa... 63 9e-11
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE HOM... 62 1e-10
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN... 62 1e-10
AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPa... 62 1e-10
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (A... 62 2e-10
AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPa... 62 2e-10
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (... 61 4e-10
AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPa... 61 4e-10
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS... 60 6e-10
AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 60 6e-10
AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 60 6e-10
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;... 60 6e-10
AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein... 60 6e-10
AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPa... 60 6e-10
AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 60 6e-10
AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 60 6e-10
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP b... 60 6e-10
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D | A... 60 6e-10
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN... 60 7e-10
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D (HOARABIDO... 60 7e-10
AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPa... 60 7e-10
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP b... 60 7e-10
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D | A... 60 8e-10
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C | ... 59 1e-09
AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding | ... 59 1e-09
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding ... 59 1e-09
AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPa... 59 1e-09
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP bindin... 59 2e-09
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4... 58 3e-09
AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPa... 58 4e-09
AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPa... 57 6e-09
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 57 8e-09
AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPa... 56 1e-08
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 56 1e-08
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 56 1e-08
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS ... 56 2e-08
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 55 2e-08
AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear prot... 55 2e-08
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSI... 54 4e-08
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS... 54 5e-08
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |... 53 1e-07
AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPa... 52 2e-07
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 52 3e-07
AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protei... 51 3e-07
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding ... 51 4e-07
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP b... 51 4e-07
AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 51 4e-07
AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 51 4e-07
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 51 4e-07
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; G... 50 7e-07
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO2 (MIRO-RELATED GTP-AS... 50 9e-07
AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPa... 48 3e-06
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS... 48 4e-06
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 47 7e-06
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 47 7e-06
AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 47 8e-06
AT5G27540.2 | Symbols: MIRO1 | MIRO1 (Miro-related GTP-ase 1); G... 47 8e-06
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO1 (Miro-related GTP-... 47 8e-06
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE
GTP BINDING PROTEIN 5); GTP binding / GTPase |
chr1:28475964-28477377 FORWARD
Length = 196
Score = 226 bits (576), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 106/109 (97%), Positives = 108/109 (99%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITT Q
Sbjct: 94 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQ 142
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
(RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
chr1:6967223-6968603 FORWARD
Length = 195
Score = 226 bits (575), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 105/109 (96%), Positives = 108/109 (99%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 33 DYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 92
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
EN+AKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITT Q
Sbjct: 93 ENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQ 141
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | ROP1
(RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding /
GTPase activating protein binding / GTPase/ protein
binding | chr3:19043197-19044215 FORWARD
Length = 197
Score = 225 bits (574), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 109/109 (100%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPITTAQ
Sbjct: 94 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQ 142
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 109/109 (100%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPITTAQ
Sbjct: 94 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQ 142
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 109/109 (100%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPITTAQ
Sbjct: 94 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQ 142
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6
(ARABIDOPSIS RAC-LIKE 6); GTP binding |
chr4:17024051-17025514 REVERSE
Length = 197
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/109 (93%), Positives = 108/109 (99%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPITT Q
Sbjct: 94 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTVQ 142
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
(ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
chr4:16673176-16674540 FORWARD
Length = 198
Score = 221 bits (564), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/109 (91%), Positives = 108/109 (99%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANV+VDG+T+NLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL+SKASY
Sbjct: 34 DYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV+KKW+PELRHYAPGVPIILVGTKLDLRDDKQFF +HPGAVPI+TAQ
Sbjct: 94 ENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQ 142
>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
(ARABIDOPSIS RAC-LIKE 2); GTP binding |
chr5:18643761-18645758 FORWARD
Length = 201
Score = 216 bits (549), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 99/109 (90%), Positives = 104/109 (95%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY
Sbjct: 34 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
EN+ KKW+PEL+HYAPG+PI+LVGTKLDLRDDKQF DHPGA ITTAQ
Sbjct: 94 ENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQFLKDHPGAASITTAQ 142
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP
binding | chr5:25237236-25238939 FORWARD
Length = 215
Score = 202 bits (514), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 89/109 (81%), Positives = 103/109 (94%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DY+PTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+L+FSL+S+ASY
Sbjct: 36 DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLSFSLVSRASY 95
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV KKWIPEL+H+APGVP++LVGTKLDLR+DK + DHPG P+TTAQ
Sbjct: 96 ENVFKKWIPELQHFAPGVPLVLVGTKLDLREDKHYLADHPGLSPVTTAQ 144
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10
(RHO-RELATED PROTEIN FROM PLANTS 10); GTP binding /
GTPase | chr3:17731561-17733241 FORWARD
Length = 208
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 88/109 (80%), Positives = 101/109 (92%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DY+PTVFDNFS NVVV+G TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+ASY
Sbjct: 36 DYIPTVFDNFSVNVVVEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLISRASY 95
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV KKWIPEL+H+APGVPI+LVGTK+DLR+D+ + DHPG P+TT+Q
Sbjct: 96 ENVFKKWIPELQHFAPGVPIVLVGTKMDLREDRHYLSDHPGLSPVTTSQ 144
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
chr2:18429276-18430636 FORWARD
Length = 209
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 97/109 (88%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DYVPTVFDNF+ANV+VDG TVNLGLWDTAGQEDYNR+RPLSYRGADVF+LAFSLIS+ S+
Sbjct: 46 DYVPTVFDNFNANVLVDGKTVNLGLWDTAGQEDYNRVRPLSYRGADVFILAFSLISRPSF 105
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
EN+AKKW+PELRHYAP VPI+LVGTK DLRD+ QF ++PGA I Q
Sbjct: 106 ENIAKKWVPELRHYAPTVPIVLVGTKSDLRDNMQFPKNYPGACTIFPEQ 154
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
(RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
chr4:14278289-14279705 FORWARD
Length = 209
Score = 184 bits (466), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 93/109 (85%)
Query: 40 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
DY+PTVFDNFSANV VDG VNLGLWDTAGQEDY+RLRPLSYRGAD+F+LAFSLISKASY
Sbjct: 34 DYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASY 93
Query: 100 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
ENV KKW+PELR +AP VPI+LVGTKLDLRDDK + DH + T +
Sbjct: 94 ENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKGYLADHTNVITSTQGE 142
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RHA1 (RAB HOMOLOG 1); GTP binding |
chr5:18244495-18246060 FORWARD
Length = 200
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 49 FSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIP 108
FS + V+ +TV +WDTAGQE Y+ L P+ YRGA ++ F + ++AS+E AKKW+
Sbjct: 48 FSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQ 106
Query: 109 ELRHYA-PGVPIILVGTKLDLRDDKQFFIDH 138
EL+ P + + L G K DL D ++ +
Sbjct: 107 ELQAQGNPNMVMALAGNKADLLDARKVSAEE 137
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | ARA7; GTP binding |
chr4:10687441-10689449 REVERSE
Length = 200
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 49 FSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIP 108
FS + V+ +TV +WDTAGQE Y+ L P+ YRGA ++ F + ++AS+E AKKW+
Sbjct: 48 FSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQ 106
Query: 109 ELRHYA-PGVPIILVGTKLDLRDDKQ 133
EL+ P + + L G K DL D ++
Sbjct: 107 ELQAQGNPNMVMALAGNKSDLLDARK 132
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; GTP
binding / protein binding | chr2:18411778-18413883
REVERSE
Length = 208
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T +F+Y + Y T+ D S + ++ TV L LWDTAGQE +
Sbjct: 14 FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQF 134
L P R + V ++ + + S+ S+ N KWI E+R V ++LVG K DL D +Q
Sbjct: 74 LIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDKRQV 132
Query: 135 FIDHPGA 141
I+ A
Sbjct: 133 SIEEAEA 139
>AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase |
chr3:20318597-20320737 FORWARD
Length = 193
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 56 DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYA 114
D +TV +WDTAGQE Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +
Sbjct: 79 DSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGS 137
Query: 115 PGVPIILVGTKLDLRDDKQ 133
P + + LVG K DL + ++
Sbjct: 138 PDIVMALVGNKADLHEKRE 156
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 |
ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP
binding | chr2:9466568-9467688 FORWARD
Length = 207
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T +F+Y + Y T+ D S + ++ TV L LWDTAGQE +
Sbjct: 14 FLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDDKQF 134
L P R + V ++ + + ++ S+ N + KWI E+R+ G V I+LVG K DL + +Q
Sbjct: 74 LIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNKTDLVEKRQV 132
Query: 135 FIDH 138
I+
Sbjct: 133 SIEE 136
>AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS RAB
GTPASE HOMOLOG A1B); GTP binding | chr1:5787489-5789147
REVERSE
Length = 216
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VDG V +WDTAGQE Y + YRGA LL + + +A++ENV +W+ EL+ H
Sbjct: 57 VDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHT 115
Query: 114 APGVPIILVGTKLDLR 129
P + ++LVG K DLR
Sbjct: 116 DPNIVVMLVGNKSDLR 131
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP
binding / GTPase | chr3:20318597-20320782 FORWARD
Length = 202
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 56 DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYA 114
D +TV +WDTAGQE Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +
Sbjct: 79 DSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGS 137
Query: 115 PGVPIILVGTKLDLRDDKQ 133
P + + LVG K DL + ++
Sbjct: 138 PDIVMALVGNKADLHEKRE 156
>AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPase
homolog H1e); GTP binding | chr5:3219991-3221301 FORWARD
Length = 207
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T +F+Y + Y T+ D S + ++ TV L LWDTAGQE +
Sbjct: 14 FLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQF 134
L P R + V ++ + + ++ S+ N + KWI ++R V I+LVG K DL D +Q
Sbjct: 74 LIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNKTDLVDKRQV 132
Query: 135 FIDH 138
I+
Sbjct: 133 SIEE 136
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; GTP
binding | chr1:1951089-1952686 REVERSE
Length = 216
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
V+G V +WDTAGQE Y + YRGA LL + + A++EN A +W+ ELR H
Sbjct: 57 VEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHT 115
Query: 114 APGVPIILVGTKLDLR 129
P + ++L+G K DLR
Sbjct: 116 DPNIVVMLIGNKCDLR 131
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A |
ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding |
chr1:3118350-3119571 REVERSE
Length = 217
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
V+G TV +WDTAGQE Y + YRGA LL + + ++ENV+ +W+ ELR +A
Sbjct: 56 VEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHA 114
Query: 115 -PGVPIILVGTKLDLR-------DDKQFFIDHPGAVPITTA 147
+ I+L+G K DL+ +D Q + + G I T+
Sbjct: 115 DSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETS 155
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A |
ARA-5 (ARABIDOPSIS RAS 5); GTP binding |
chr1:400350-401788 REVERSE
Length = 203
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 39 QDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKA 97
+ Y+ T+ +F V DG T+ L +WDTAGQE + + YRGA ++ + + +
Sbjct: 35 ESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEE 94
Query: 98 SYENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
S+ NV K+W+ E+ YA V +LVG K DL +++ A+P TA+
Sbjct: 95 SFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLTENR--------AIPYETAKA 138
>AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPase
homolog A1e); GTP binding | chr4:10183903-10185223
REVERSE
Length = 217
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 52 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR 111
+V VD + LWDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR
Sbjct: 54 SVHVDEKIIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELR 112
Query: 112 -HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
H V I+LVG K DLR H AVP A+
Sbjct: 113 DHTDANVVIMLVGNKADLR--------HLRAVPTEEAR 142
>AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPase
homolog A6a); GTP binding | chr1:27687033-27687987
FORWARD
Length = 233
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 40 DYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKAS 98
D PT+ F+ NV V + +WDTAGQE + + YRGA LL + + + +
Sbjct: 41 DSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTT 100
Query: 99 YENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFFIDH 138
++N+ KKW+ ELR +A P ++LVG K DLR ++ D
Sbjct: 101 FDNI-KKWLFELRDFANPETVVVLVGNKSDLRQSREVEEDE 140
>AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPase
homolog H1c); GTP binding / protein binding |
chr4:18506112-18507459 FORWARD
Length = 214
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T +F+Y + Y PT+ D S + ++ TV L LWDTAGQE +
Sbjct: 14 FLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG---VPIILVGTKLDLRDDK 132
L P R + V ++ + + ++ ++ N + KWI ++ H G V I+LVG K DL + +
Sbjct: 74 LIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDV-HRERGQSNVIIVLVGNKTDLVEKR 131
Query: 133 QFFIDH 138
Q I
Sbjct: 132 QVSISE 137
>AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPase
homolog A1c); GTP binding | chr5:18559318-18560639
FORWARD
Length = 216
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VD + +WDTAGQE Y + YRGA LL + + +++ENV + W+ ELR H
Sbjct: 57 VDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHT 115
Query: 114 APGVPIILVGTKLDLR 129
P + ++LVG K DLR
Sbjct: 116 DPNIVVMLVGNKSDLR 131
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE
HOMOLOG A4D); GTP binding | chr3:3879495-3880437 REVERSE
Length = 222
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 23 IFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSY 81
+ +T+ +F + D T+ F + +V+D TV +WDTAGQE Y + Y
Sbjct: 26 VGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQERYRAVTSAYY 85
Query: 82 RGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 128
RGA +L + + + S++++A KW+ ELR +A + I+L+G K DL
Sbjct: 86 RGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNKCDL 132
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
(GTP-BINDING 2); GTP binding | chr4:16987118-16988839
REVERSE
Length = 211
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 32 FLYHFVEQDYVP----TVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADV 86
L F ++ + P T+ F A +V VDG + L +WDTAGQE + + YRGA
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 87 FLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL--------RDDKQFFID 137
LL + + + ++ ++A W+ + R +A P + I+L+G K DL + +QF +
Sbjct: 82 ALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKE 140
Query: 138 H 138
H
Sbjct: 141 H 141
>AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPase
homolog A1g); GTP binding | chr3:5069239-5070025 FORWARD
Length = 217
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR H
Sbjct: 57 VDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHT 115
Query: 114 APGVPIILVGTKLDLR 129
+ I+LVG K DLR
Sbjct: 116 EANIVIMLVGNKADLR 131
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D
(ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding |
chr4:10320156-10321339 REVERSE
Length = 214
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
V+ + +WDTAGQE Y + YRGA LL + + +++ENV ++W+ ELR H
Sbjct: 57 VNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHT 115
Query: 114 APGVPIILVGTKLDLR 129
P + ++LVG K DLR
Sbjct: 116 DPNIVVMLVGNKSDLR 131
>AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPase
homolog H1a); GTP binding | chr5:25963562-25964792
REVERSE
Length = 206
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 17 FCLNQYIFETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNR 75
F +Q + +T F+Y + Y T+ D S + T L LWDTAGQE +
Sbjct: 12 FLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQERFKS 71
Query: 76 LRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQF 134
L P R + V ++ + + SK S+ N + KWI E+R V I+LVG K DL + +Q
Sbjct: 72 LVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNKTDLVNKRQV 130
Query: 135 FIDH 138
I+
Sbjct: 131 SIEE 134
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B
(ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding /
GTPase/ protein binding | chr1:2276270-2277154 FORWARD
Length = 214
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
V+G TV +WDTAGQE Y + YRGA LL + + + ++ENV +W+ ELR +A
Sbjct: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHA 114
Query: 115 -PGVPIILVGTKLDL 128
+ I++ G K DL
Sbjct: 115 DSNIVIMMAGNKSDL 129
>AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPase
homolog A6b); GTP binding / GTPase/ protein binding |
chr1:6265416-6266659 REVERSE
Length = 229
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 40 DYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKAS 98
D PT+ +F+ NV V T+ +WDTAGQE + + YRGA LL + + + +
Sbjct: 41 DSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRIT 100
Query: 99 YENVAKKWIPELRHY-APGVPIILVGTKLDLRDDKQ 133
++N+ +KW+ ELR + +P ++LVG K DL ++
Sbjct: 101 FKNI-EKWLSELRGFSSPETVVVLVGNKSDLGQSRE 135
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS
RAB GTPASE HOMOLOG E1E); GTP binding |
chr3:3034687-3036379 FORWARD
Length = 218
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
V +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + W+ + +
Sbjct: 57 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDSVNKILVGNKADMDESKR-------AVPTSKGQA 146
>AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
++ T+ +F + +DG + L +WDTAGQE + + YRGA LL + + ++S+
Sbjct: 44 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 103
Query: 100 ENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
N+ + WI + +H + V ILVG K D+ + K+ AVP Q
Sbjct: 104 NNI-RNWIRNIEQHASDNVNKILVGNKADMDESKR-------AVPTAKGQA 146
>AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
++ T+ +F + +DG + L +WDTAGQE + + YRGA LL + + ++S+
Sbjct: 44 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 103
Query: 100 ENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
N+ + WI + +H + V ILVG K D+ + K+ AVP Q
Sbjct: 104 NNI-RNWIRNIEQHASDNVNKILVGNKADMDESKR-------AVPTAKGQA 146
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;
GTP binding | chr3:16917908-16919740 FORWARD
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
++ T+ +F + +DG + L +WDTAGQE + + YRGA LL + + ++S+
Sbjct: 44 FITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSF 103
Query: 100 ENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
N+ + WI + +H + V ILVG K D+ + K+ AVP Q
Sbjct: 104 NNI-RNWIRNIEQHASDNVNKILVGNKADMDESKR-------AVPTAKGQA 146
>AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein |
chr5:24107450-24109049 REVERSE
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDNVNKILVGNKADMDESKR-------AVPKSKGQA 146
>AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPase
homolog A1i); GTP binding | chr1:10036966-10037698
REVERSE
Length = 218
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 31 KFLYHFVEQDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLL 89
+F + D T+ F+ ++ D V +WDTAGQE Y + YRGA LL
Sbjct: 32 RFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALL 91
Query: 90 AFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 129
+ + ++ENV ++W+ ELR H + I+LVG K DLR
Sbjct: 92 VYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
>AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDSVNKILVGNKADMDESKR-------AVPKSKGQA 146
>AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDSVNKILVGNKADMDESKR-------AVPKSKGQA 146
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP
binding | chr3:19876531-19878264 REVERSE
Length = 216
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
+ +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + WI + +
Sbjct: 57 IELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP + Q
Sbjct: 116 HASDSVNKILVGNKADMDESKR-------AVPKSKGQA 146
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883713-885158 FORWARD
Length = 206
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
V +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP Q
Sbjct: 106 HASDNVNKILVGNKADMDESKR-------AVPTAKGQA 136
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
(GTP-BINDING 2); GTP binding | chr4:16987118-16988587
REVERSE
Length = 165
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
V VDG + L +WDTAGQE + + YRGA LL + + + ++ ++A W+ + R
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 113 YA-PGVPIILVGTKLDL--------RDDKQFFIDH 138
+A P + I+L+G K DL + +QF +H
Sbjct: 61 HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEH 95
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D
(HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding |
chr5:23876858-23878244 FORWARD
Length = 217
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
V+G TV +WDTAGQE Y + YRGA LL + + + +++NV +W+ ELR +A
Sbjct: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHA 114
Query: 115 -PGVPIILVGTKLDL-------RDDKQFFIDHPG 140
+ I++ G K DL +D Q + G
Sbjct: 115 DSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEG 148
>AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPase
homolog A1f); GTP binding | chr5:24484750-24485565
FORWARD
Length = 217
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
VD V +WDTAGQE Y + YRGA LL + + ++ENV ++W+ ELR H
Sbjct: 57 VDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHT 115
Query: 114 APGVPIILVGTKLDLR 129
+ I+ VG K DLR
Sbjct: 116 DANIVIMFVGNKADLR 131
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP
binding | chr4:9773721-9775424 REVERSE
Length = 202
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
Y+ T+ +F V DG T+ L +WDTAGQE + + YRGA ++ + + S+
Sbjct: 37 YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESF 96
Query: 100 ENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDK 132
NV K+W+ E+ YA V +LVG K DL K
Sbjct: 97 NNV-KQWLNEIDRYASENVNKLLVGNKCDLTSQK 129
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883679-885158 FORWARD
Length = 216
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 111
V +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + W+ + +
Sbjct: 57 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 115
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQV 149
H + V ILVG K D+ + K+ AVP Q
Sbjct: 116 HASDNVNKILVGNKADMDESKR-------AVPTAKGQA 146
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C |
ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP
binding | chr3:17246699-17248362 REVERSE
Length = 217
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
V+G T+ +WDTAGQE Y + YRGA LL + + + +++NV +W+ ELR +A
Sbjct: 56 VEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHA 114
Query: 115 -PGVPIILVGTKLDL-------RDDKQFFIDHPG 140
+ I++ G K DL +D Q + G
Sbjct: 115 DSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEG 148
>AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding |
chr5:19421533-19422473 REVERSE
Length = 223
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
+D T+ +WDTAGQE Y + YRGA +L + + + S+++VA +W+ ELR +A
Sbjct: 59 IDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHA 117
Query: 115 -PGVPIILVGTKLDL 128
+ I+L+G K DL
Sbjct: 118 DKNIVIMLIGNKTDL 132
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding |
chr5:19167029-19168718 FORWARD
Length = 202
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
Y+ T+ +F V DG T+ L +WDTAGQE + + YRGA ++ + + S+
Sbjct: 37 YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESF 96
Query: 100 ENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDK 132
NV K+W+ E+ YA V +LVG K DL K
Sbjct: 97 NNV-KQWLNEIDRYASENVNKLLVGNKNDLTSQK 129
>AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPase
homolog A1h); GTP binding | chr2:14337366-14338251
REVERSE
Length = 218
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 31 KFLYHFVEQDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLL 89
+F + D T+ F+ ++ VD V +WDTAGQE Y + YRGA LL
Sbjct: 32 RFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALL 91
Query: 90 AFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDL 128
+ + ++ENV ++W+ ELR H I+LVG K DL
Sbjct: 92 VYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADL 130
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP binding /
GTP-dependent protein binding / myosin XI tail binding |
chr3:3709490-3711397 REVERSE
Length = 205
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 41 YVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 99
Y+ T+ +F + DG T+ L +WDTAGQE + + YRGA ++ + S+
Sbjct: 37 YISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESF 96
Query: 100 ENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDK 132
NV K+W+ E+ YA V +L+G K D+ + K
Sbjct: 97 NNV-KQWLSEIDRYANESVCKLLIGNKNDMVESK 129
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4B
(RAB GTPASE HOMOLOG A4B); GTP binding |
chr4:18542722-18543779 FORWARD
Length = 224
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA 114
++ ++ +WDTAGQE Y + YRGA +L + + + ++E++ +W+ ELR +A
Sbjct: 61 IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHA 119
Query: 115 -PGVPIILVGTKLDLRDDKQFFIDHPGAVPITTAQ 148
+ IIL+G K DL D + AVP A+
Sbjct: 120 DKNIVIILIGNKSDLEDQR--------AVPTEDAK 146
>AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPase
homolog A5d); GTP binding | chr2:13473781-13474957
REVERSE
Length = 219
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 52 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR 111
N+ ++G V +WDTAGQE + + YRGA L+ + + ++++E+V +W+ EL+
Sbjct: 53 NMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELK 111
Query: 112 -HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPIT 145
H V +LVG K DL + ++ A+ T
Sbjct: 112 THSDTTVARMLVGNKCDLESIRAVSVEEGKALAET 146
>AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase
homolog A4a); GTP binding | chr5:26083437-26084550
FORWARD
Length = 226
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
+V+D +V +WDTAGQE Y + YRGA +L + + + +++++ +W+ ELR
Sbjct: 59 LVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRA 117
Query: 113 YA-PGVPIILVGTKLDLRDDK 132
+A + IIL+G K DL D +
Sbjct: 118 HADKNIVIILIGNKSDLVDQR 138
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding /
GTP-dependent protein binding / myosin XI tail binding |
chr5:885741-887061 REVERSE
Length = 210
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 32 FLYHFVEQDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLA 90
F+ VE D PT+ +F + V G + L +WDTAGQE + L YRGA +L
Sbjct: 33 FISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILV 91
Query: 91 FSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDK 132
+ + + ++ N+ W E+ Y+ + LVG K+D ++
Sbjct: 92 YDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRESER 135
>AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPase
homolog A5b); GTP binding | chr3:2372485-2373482 REVERSE
Length = 217
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR- 111
V ++G V +WDTAGQE + + YRGA L+ + + ++E+V K+W+ EL
Sbjct: 54 VEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNT 112
Query: 112 HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP 143
H V +LVG K DL D + ++ A+
Sbjct: 113 HCDTAVAQMLVGNKCDLEDIRAVSVEEGKALA 144
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
ARA4; GTP binding / GTPase/ protein binding |
chr2:17929899-17930904 REVERSE
Length = 214
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 50 SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE 109
+ ++++DG V +WDTAGQE + + YRGA L+ + + +++ENV +W+ E
Sbjct: 51 TQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDE 109
Query: 110 LR-HYAPGVPIILVGTKLDL 128
L H V +L+G K DL
Sbjct: 110 LNTHSDTTVAKMLIGNKCDL 129
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E |
RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding |
chr1:1748314-1749350 FORWARD
Length = 261
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
++G V +WDTAGQE + + YRGA L+ + + + ++E+V +W+ EL+ H
Sbjct: 99 IEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHS 157
Query: 114 APGVPIILVGTKLDLRDDKQFFIDHPGAVP 143
V +LVG K DL + + ++ A+
Sbjct: 158 DTTVARMLVGNKCDLENIRAVSVEEGKALA 187
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS RAB
GTPASE HOMOLOG A3); GTP binding | chr1:86715-88145
REVERSE
Length = 237
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 53 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 112
+ + G V +WDTAGQE Y + YRGA ++ + + + S+++VA +W+ ELR
Sbjct: 70 ITLRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRA 128
Query: 113 YAPGVPII-LVGTKLDL 128
+A +I LVG K DL
Sbjct: 129 HADDSAVIMLVGNKADL 145
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RABB1C (ARABIDOPSIS RAB GTPASE
HOMOLOG B1C); GTP binding / GTPase |
chr4:9644908-9646220 REVERSE
Length = 211
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 32 FLYHFVEQDYVP----TVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADV 86
L F ++ + P T+ F A ++ +D + L +WDTAGQE + + YRGA
Sbjct: 22 LLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAG 81
Query: 87 FLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL--------RDDKQFFID 137
LL + + + ++ ++A W+ + R +A + I+L+G K DL + +QF +
Sbjct: 82 ALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKE 140
Query: 138 H 138
H
Sbjct: 141 H 141
>AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear protein
4); GTP binding / GTPase/ protein binding |
chr5:22351576-22353058 REVERSE
Length = 222
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E + PT+ D + + + + WDTAGQE Y+ L+ Y
Sbjct: 26 KTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL 128
++ F + ++ +Y N+ +W +LR +PI+L G K+D+
Sbjct: 86 GQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDV 129
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSIS
RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding /
transcription factor binding | chr3:3036864-3038121
REVERSE
Length = 205
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 39 QDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKA 97
+D PT+ +F + V G + L +WDTAGQE + L +RG+ +L + + +
Sbjct: 39 EDLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRE 98
Query: 98 SYENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDKQ 133
++ N+A W E+ Y+ I LVG K+D +++
Sbjct: 99 TFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRESERK 136
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS
RAB GTPASE HOMOLOG B1A); GTP binding |
chr4:9641980-9643541 REVERSE
Length = 205
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 50 SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE 109
+ + +D + L +WDTAGQE + + YRG LL + + + ++ ++A W+ E
Sbjct: 45 AKTITIDNKPIKLQIWDTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEE 103
Query: 110 LR-HYAPGVPIILVGTKLDLRDDK 132
R H + + +L+G K DL D +
Sbjct: 104 ARQHASENMTTMLIGNKCDLEDKR 127
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
chr2:9324899-9326170 REVERSE
Length = 212
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 19 LNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLR 77
+NQY+++ KF+K+ Y T+ +F + + +D +V L +WDTAGQE + L
Sbjct: 26 MNQYVYK-KFNKQ---------YKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQSLG 75
Query: 78 PLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTKLDL 128
YRGAD +L + + + S+E + W E L+ P P +L+G K D+
Sbjct: 76 AAFYRGADCCVLVYDVNNLKSFETL-NNWHTEFLKQANPMEPETFPFVLIGNKTDV 130
>AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPase
homolog A5a); GTP binding | chr5:19277596-19278366
REVERSE
Length = 221
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 55 VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HY 113
++G + +WDTAGQE + + YRGA LL + + + ++ ++ +W+ EL H
Sbjct: 58 INGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHS 116
Query: 114 APGVPIILVGTKLDLRD 130
V ILVG K DL+D
Sbjct: 117 DMNVVTILVGNKSDLKD 133
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP
binding | chr3:6484266-6486005 FORWARD
Length = 206
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 19 LNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLR 77
+NQY+ +KKF Y T+ +F + V + L +WDTAGQE + L
Sbjct: 25 MNQYV-----NKKFSNQ-----YKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
Query: 78 PLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTKLDLRDDK 132
YRGAD +L + + S S+EN+ W E L +P P +L+G K+D+ D
Sbjct: 75 VAFYRGADCCVLVYDVNSMKSFENL-NNWREEFLIQASPSDPENFPFVLIGNKVDVDDGN 133
Query: 133 QFFIDHPGA 141
+ A
Sbjct: 134 SRVVSEKKA 142
>AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protein
binding | chr5:6762817-6764381 FORWARD
Length = 221
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding /
GTPase/ protein binding | chr5:6760364-6761747 FORWARD
Length = 221
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP
binding / GTPase/ protein binding |
chr5:22392285-22393957 FORWARD
Length = 221
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 25 ETKFDKKFLYHFVEQDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRG 83
+T F K+ L E+ Y PT+ + + + + WDTAGQE + LR Y
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 84 ADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 130
++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 86 GQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 40 DYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKAS 98
D PT+ +F + G + L +WDTAGQE + L YRGA ++ + + + +
Sbjct: 40 DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 99
Query: 99 YENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDK 132
+ N++ W E+ Y+ I LVG K+D ++
Sbjct: 100 FTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESER 135
>AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 40 DYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKAS 98
D PT+ +F + G + L +WDTAGQE + L YRGA ++ + + + +
Sbjct: 40 DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 99
Query: 99 YENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDK 132
+ N++ W E+ Y+ I LVG K+D ++
Sbjct: 100 FTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESER 135
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1 |
ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP
binding | chr1:16646934-16648395 FORWARD
Length = 212
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 40 DYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKAS 98
D PT+ +F + G + L +WDTAGQE + L YRGA ++ + + + +
Sbjct: 40 DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 99
Query: 99 YENVAKKWIPELRHYAPGVPII--LVGTKLDLRDDK 132
+ N++ W E+ Y+ I LVG K+D ++
Sbjct: 100 FTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESER 135
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; GTP
binding | chr1:8049247-8050494 FORWARD
Length = 203
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 11 VLLSVQFCLNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAG 69
LL V + + +T +++ + Q Y T+ +F + + +D V L +WDTAG
Sbjct: 7 TLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAG 66
Query: 70 QEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGT 124
QE + L YRGAD +L + + S+E++ W E L +P P IL+G
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNHLKSFESL-DNWHNEFLTRASPRDPMAFPFILLGN 125
Query: 125 KLDL 128
K+D+
Sbjct: 126 KVDI 129
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO2 (MIRO-RELATED GTP-ASE
2); GTPase/ calcium ion binding | chr3:23329200-23332692
REVERSE
Length = 643
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 74 NRLRPLS-YRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 132
NR++ + +R ADV LL ++ ++ + ++ W+PELR P+I+VG KLDLRD++
Sbjct: 74 NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDER 133
>AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPase
homolog G3d); GTP binding | chr1:19468150-19469449
REVERSE
Length = 206
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 11 VLLSVQFCLNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAG 69
VLL V + + +T +F+ Y T+ +F + V +D L +WDTAG
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAG 66
Query: 70 QEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGT 124
QE + L YRGAD +L + + S++N+ W E L +P P +++G
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNL-NNWREEFLIQASPSDPENFPFVVLGN 125
Query: 125 KLDLRDDKQFFIDHPGA 141
K D+ K + A
Sbjct: 126 KTDVDGGKSRVVSEKKA 142
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS
RAB GTPASE HOMOLOG G3C); GTP binding |
chr3:5459270-5460556 FORWARD
Length = 206
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 11 VLLSVQFCLNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAG 69
VLL V + + +T +F+ Y T+ +F + V +D L +WDTAG
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAG 66
Query: 70 QEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGT 124
QE + L YRGAD +L + S+EN+ W E L +P P +++G
Sbjct: 67 QERFQSLGVAFYRGADCCVLVNDVNVMKSFENL-NNWREEFLIQASPSDPENFPFVVLGN 125
Query: 125 KLDLRDDKQFFIDHPGA 141
K D+ K + A
Sbjct: 126 KTDVDGGKSRVVTEKKA 142
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 19 LNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLR 77
+NQY+ +KKF Y T+ +F + V + L +WDTAGQE + L
Sbjct: 25 MNQYV-----NKKF-----SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
Query: 78 PLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTKLDL 128
YRGAD +L + + S S+E++ W E L +P P +++G K+D+
Sbjct: 75 VAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNKIDV 129
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 19 LNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLR 77
+NQY+ +KKF Y T+ +F + V + L +WDTAGQE + L
Sbjct: 25 MNQYV-----NKKF-----SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLG 74
Query: 78 PLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTKLDL 128
YRGAD +L + + S S+E++ W E L +P P +++G K+D+
Sbjct: 75 VAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNKIDV 129
>AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protein,
putative | chr4:6133101-6134959 FORWARD
Length = 206
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 19 LNQYIFETKFDKKFLYHFVEQDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLR 77
+NQY+ KKF Y T+ +F + + + V L +WDTAGQE + L
Sbjct: 25 MNQYVH-----KKFSMQ-----YKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLG 74
Query: 78 PLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAPG----VPIILVGTKLDL 128
YRGAD L + + S++N+ + W E L+ +P P I++G K+D+
Sbjct: 75 AAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFPFIVLGNKIDV 129
>AT5G27540.2 | Symbols: MIRO1 | MIRO1 (Miro-related GTP-ase 1); GTP
binding | chr5:9722816-9727112 FORWARD
Length = 648
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 42 VPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN 101
VP V ++ + + + + DT+ + + + + AD +L ++ + E
Sbjct: 46 VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPEDRDIVAEELKRADAVVLTYACDRPETLER 105
Query: 102 VAKKWIPELRHYAPGVPIILVGTKLDLRDD 131
+++ W+PELR +PII+ G KLD RDD
Sbjct: 106 LSEYWLPELRRLEVKIPIIVAGCKLDFRDD 135
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO1 (Miro-related GTP-ase
1); GTP binding | chr5:9722816-9727112 FORWARD
Length = 648
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 42 VPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN 101
VP V ++ + + + + DT+ + + + + AD +L ++ + E
Sbjct: 46 VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPEDRDIVAEELKRADAVVLTYACDRPETLER 105
Query: 102 VAKKWIPELRHYAPGVPIILVGTKLDLRDD 131
+++ W+PELR +PII+ G KLD RDD
Sbjct: 106 LSEYWLPELRRLEVKIPIIVAGCKLDFRDD 135