Jatropha Genome Database

JcCB0161221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0161221.10 - phase: 0 
         (132 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55130.1 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,...   133   3e-32
AT5G55130.2 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,...    74   3e-14

>AT5G55130.1 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,
           REDUCTASE AND XANTHINE DEHYDROGENASE 5);
           Mo-molybdopterin cofactor sulfurase |
           chr5:22373374-22376028 REVERSE
          Length = 464

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 6/121 (4%)

Query: 1   MKSNGTDAAQILGEIETLKATKSDIENRIAALEAKLRHLNLPN--DNVSSNGSSLPVSIV 58
           M SNG D+++I+ E+E LK  K++IE+RI+ LEAKL+        D VS+  S L    +
Sbjct: 1   MMSNGGDSSEIVRELEELKLKKAEIEHRISTLEAKLQDTAAVELYDAVSNGDSYLTAPEL 60

Query: 59  DYGFGHGLSSDMIYRYSRHLLLPSFGVQGQSNLLKSSILVVGAGGLGSPALLYLAACGVG 118
           +    HGLS D IYRYSR LLLPSF V+GQSNLLKSS+LV+GAGGLGSPALLYLAACGVG
Sbjct: 61  E----HGLSPDQIYRYSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVG 116

Query: 119 K 119
           +
Sbjct: 117 Q 117


>AT5G55130.2 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,
          REDUCTASE AND XANTHINE DEHYDROGENASE 5);
          Mo-molybdopterin cofactor sulfurase |
          chr5:22373374-22376028 REVERSE
          Length = 437

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 6/89 (6%)

Query: 1  MKSNGTDAAQILGEIETLKATKSDIENRIAALEAKLRHLNLPN--DNVSSNGSSLPVSIV 58
          M SNG D+++I+ E+E LK  K++IE+RI+ LEAKL+        D VS+  S L    +
Sbjct: 1  MMSNGGDSSEIVRELEELKLKKAEIEHRISTLEAKLQDTAAVELYDAVSNGDSYLTAPEL 60

Query: 59 DYGFGHGLSSDMIYRYSRHLLLPSFGVQG 87
          +    HGLS D IYRYSR LLLPSF V+ 
Sbjct: 61 E----HGLSPDQIYRYSRQLLLPSFAVEA 85