Jatropha Genome Database

JcCB0150901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0150901.10 + phase: 0 /pseudo/partial
         (257 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   262   2e-70
AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   261   4e-70

>AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26753745-26757090 REVERSE
          Length = 667

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/179 (70%), Positives = 150/179 (83%)

Query: 62  EGMEQSIESGTPIDIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSF 121
           E  +QS+E+ TP+D+VSSLK YE +RRLRVAIIH MARMAAIMASTYKAYLGVGLGPLSF
Sbjct: 402 EAWKQSVETTTPVDVVSSLKRYEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSF 461

Query: 122 LTKYRIPHPGRVGGRFFIDIAMPVMLSWVLGGNSSKLEGRSQCCRLSDKASDQLRTWFED 181
           LTK+R+PHPGRVGGRFF+DIAMP ML WVLGGNS KL+GR   CRL+DKA D+LR WFED
Sbjct: 462 LTKFRVPHPGRVGGRFFVDIAMPSMLDWVLGGNSEKLQGRPPSCRLTDKADDRLREWFED 521

Query: 182 DDALERALNAEWFLLPLGNKVVVSEPICLSRNENTPCVVGKVSHKDFPGMSIVIPSPQV 240
           DDALER +  EW+L+P G+   VSE +CL+++E+ PC+VG    +DFPGM IVIPS QV
Sbjct: 522 DDALERTIKGEWYLIPHGDDCCVSETLCLTKDEDQPCIVGSEPDQDFPGMRIVIPSSQV 580


>AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26754026-26757090 REVERSE
          Length = 610

 Score =  261 bits (666), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 127/179 (70%), Positives = 150/179 (83%)

Query: 62  EGMEQSIESGTPIDIVSSLKSYERARRLRVAIIHGMARMAAIMASTYKAYLGVGLGPLSF 121
           E  +QS+E+ TP+D+VSSLK YE +RRLRVAIIH MARMAAIMASTYKAYLGVGLGPLSF
Sbjct: 402 EAWKQSVETTTPVDVVSSLKRYEESRRLRVAIIHAMARMAAIMASTYKAYLGVGLGPLSF 461

Query: 122 LTKYRIPHPGRVGGRFFIDIAMPVMLSWVLGGNSSKLEGRSQCCRLSDKASDQLRTWFED 181
           LTK+R+PHPGRVGGRFF+DIAMP ML WVLGGNS KL+GR   CRL+DKA D+LR WFED
Sbjct: 462 LTKFRVPHPGRVGGRFFVDIAMPSMLDWVLGGNSEKLQGRPPSCRLTDKADDRLREWFED 521

Query: 182 DDALERALNAEWFLLPLGNKVVVSEPICLSRNENTPCVVGKVSHKDFPGMSIVIPSPQV 240
           DDALER +  EW+L+P G+   VSE +CL+++E+ PC+VG    +DFPGM IVIPS QV
Sbjct: 522 DDALERTIKGEWYLIPHGDDCCVSETLCLTKDEDQPCIVGSEPDQDFPGMRIVIPSSQV 580