Jatropha Genome Database

JcCB0149951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0149951.10 + phase: 1 /partial
         (195 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74030.1 | Symbols:  | enolase, putative | chr1:27839465-2784...   375   e-105
AT2G36530.1 | Symbols: LOS2 | LOS2; copper ion binding / phospho...   279   7e-76
AT2G29560.1 | Symbols:  | enolase, putative | chr2:12646635-1264...   217   5e-57

>AT1G74030.1 | Symbols:  | enolase, putative |
           chr1:27839465-27841901 REVERSE
          Length = 477

 Score =  375 bits (964), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 178/194 (91%), Positives = 190/194 (97%)

Query: 2   QIKIGMDVAASEFLTKDGKYDLNFKKQPNDGAHVLSAQNLGELYKEFIKDFPIVSIEDPF 61
           +IKIGMDVAASEF  KDG+YDLNFKKQPNDGAHVLSA++L +LY+EFIKDFPIVSIEDPF
Sbjct: 284 KIKIGMDVAASEFFMKDGRYDLNFKKQPNDGAHVLSAESLADLYREFIKDFPIVSIEDPF 343

Query: 62  DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGSVTESIRA 121
           DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAI+K++CN LLLKVNQIG+VTESI+A
Sbjct: 344 DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIKKQSCNALLLKVNQIGTVTESIQA 403

Query: 122 ALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEE 181
           ALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERL+KYNQLLRIEEE
Sbjct: 404 ALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLSKYNQLLRIEEE 463

Query: 182 LGNVRYAGEAFRSP 195
           LGNVRYAGEAFRSP
Sbjct: 464 LGNVRYAGEAFRSP 477


>AT2G36530.1 | Symbols: LOS2 | LOS2; copper ion binding /
           phosphopyruvate hydratase | chr2:15321081-15323786
           REVERSE
          Length = 444

 Score =  279 bits (714), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 134/197 (68%), Positives = 161/197 (81%), Gaps = 3/197 (1%)

Query: 2   QIKIGMDVAASEFLTKDGKYDLNFKKQPNDGAHVLSAQNLGELYKEFIKDFPIVSIEDPF 61
           ++ IGMDVAASEF ++D  YDLNFK++ N+G+  +S   L +LYK F+ ++PIVSIEDPF
Sbjct: 244 KVVIGMDVAASEFYSEDKTYDLNFKEENNNGSQKISGDALKDLYKSFVAEYPIVSIEDPF 303

Query: 62  DQDDWSSWASL--QSSVDIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGSVTESI 119
           DQDDW  +A +  +   ++Q+VGDDLLVTNPKR+A+AI +K+CN LLLKVNQIGSVTESI
Sbjct: 304 DQDDWEHYAKMTTECGTEVQIVGDDLLVTNPKRVAKAIAEKSCNALLLKVNQIGSVTESI 363

Query: 120 RAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIE 179
            A   SK AGWGVM SHRSGETED FIADL+VGL++GQIKTGAPCRSERLAKYNQLLRIE
Sbjct: 364 EAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIE 423

Query: 180 EELGN-VRYAGEAFRSP 195
           EELG+   YAG  FR P
Sbjct: 424 EELGSEAIYAGVNFRKP 440


>AT2G29560.1 | Symbols:  | enolase, putative |
           chr2:12646635-12649694 FORWARD
          Length = 475

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 108/193 (55%), Positives = 139/193 (72%), Gaps = 2/193 (1%)

Query: 2   QIKIGMDVAASEFLTKDGKYDLNFKKQPNDGAHVLSAQNLGELYKEFIKDFPIVSIEDPF 61
           +IKI +D+AA+ F     KYDL+ K     G +  SA+++ ++YKE   D+PIVSIEDPF
Sbjct: 281 KIKIAIDIAATNFCLGT-KYDLDIKSPNKSGQNFKSAEDMIDMYKEICNDYPIVSIEDPF 339

Query: 62  DQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKACNGLLLKVNQIGSVTESIRA 121
           D++DW       S    Q+VGDDLL++N KR+  AIQ+ +CN LLLKVNQIG+VTE+I  
Sbjct: 340 DKEDWEHTKYFSSLGICQVVGDDLLMSNSKRVERAIQESSCNALLLKVNQIGTVTEAIEV 399

Query: 122 ALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEE 181
              ++ A WGV+ SHR GETED+FI+DLSVGLA+G IK GAPCR ER  KYNQLLRIEEE
Sbjct: 400 VKMARDAQWGVVTSHRCGETEDSFISDLSVGLATGVIKAGAPCRGERTMKYNQLLRIEEE 459

Query: 182 LGN-VRYAGEAFR 193
           LG+   YAGE ++
Sbjct: 460 LGDQAVYAGEDWK 472