Jatropha Genome Database
- JcCB0148401.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0148401.10 - phase: 0 /pseudo
(449 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36390.1 | Symbols: SBE2.1, BE3 | SBE2.1 (starch branching en... 451 e-127
AT5G03650.1 | Symbols: SBE2.2 | SBE2.2 (starch branching enzyme ... 448 e-126
AT3G20440.2 | Symbols: EMB2729, BE1 | alpha-amylase/ catalytic/ ... 236 3e-62
AT3G20440.1 | Symbols: EMB2729, BE1 | alpha-amylase/ catalytic/ ... 193 2e-49
AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put... 53 3e-07
AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put... 53 3e-07
AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha... 52 8e-07
AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha... 50 3e-06
>AT2G36390.1 | Symbols: SBE2.1, BE3 | SBE2.1 (starch branching
enzyme 2.1); 1,4-alpha-glucan branching enzyme |
chr2:15264283-15269940 FORWARD
Length = 858
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/351 (61%), Positives = 263/351 (74%), Gaps = 7/351 (1%)
Query: 91 LLSIDPGLGPFKDHFSYRMKRYRNQKEQIEKHEGGLDEFSRGYLKFGFNREEGGIVYREW 150
+ IDP L ++H YR +YR +E+I+K+EGGL+ FSRGY FGF R GI YREW
Sbjct: 160 IYDIDPMLNSHRNHLDYRYGQYRKLREEIDKNEGGLEAFSRGYEIFGFTRSATGITYREW 219
Query: 151 APAAEEAQVIGDFNGWDGSNHKMEKNEFGVWSIKI-TDAAGNPAIPHNSRVKFRFKHGNG 209
AP A+ A +IGDFN W+ + M +N+FGVW I + +A G+PAIPH SRVK R +G
Sbjct: 220 APGAKAASLIGDFNNWNAKSDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSG 279
Query: 210 IWVDRIPAWIRYATVDPSNFGAPYDGVYWDPPASERYQFEYPRPPKPRAPRIYEAHVGMS 269
I D IPAWI+Y+ P PY+GVY+DPP ++Y F++PRP KP + RIYE+HVGMS
Sbjct: 280 I-KDSIPAWIKYSVQPPGEI--PYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMS 336
Query: 270 SSEPRVNTYREFADDVLPRIRANNYNTVQLMAVMEHSYYGSFGYHVTNFFAVSSRSGTPE 329
S+EP++NTY F DDVLPRI+ YN VQ+MA+ EH+YY SFGYHVTNFFA SSR GTP+
Sbjct: 337 STEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHAYYASFGYHVTNFFAPSSRFGTPD 396
Query: 330 DLKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSSQESYFHTGDRGYHKLWDS 389
DLK LIDKAH LGL VLMD++HSHAS N DGL+ FD G Q YFH+G RGYH +WDS
Sbjct: 397 DLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFD-GTDGQ--YFHSGSRGYHWMWDS 453
Query: 390 RLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGIDMAFTG 440
RLFNY +WEVLR+LLSN RWWLEEYKFDGFRFDGVTSM+Y HHG+ + FTG
Sbjct: 454 RLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTG 504
>AT5G03650.1 | Symbols: SBE2.2 | SBE2.2 (starch branching enzyme
2.2); 1,4-alpha-glucan branching enzyme |
chr5:931924-937470 FORWARD
Length = 805
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/351 (60%), Positives = 263/351 (74%), Gaps = 7/351 (1%)
Query: 91 LLSIDPGLGPFKDHFSYRMKRYRNQKEQIEKHEGGLDEFSRGYLKFGFNREEGGIVYREW 150
+ IDP L + +H YR +Y+ +E+I+K+EGGL+ FSRGY K GF+R + GI YREW
Sbjct: 125 IYEIDPMLRTYNNHLDYRYGQYKRLREEIDKYEGGLEAFSRGYEKLGFSRSDAGITYREW 184
Query: 151 APAAEEAQVIGDFNGWDGSNHKMEKNEFGVWSIKI-TDAAGNPAIPHNSRVKFRFKHGNG 209
AP A+ A +IGDFN W+ + M +NEFGVW I + + G+PAIPH SRVK R +G
Sbjct: 185 APGAKAASLIGDFNNWNSNADIMTRNEFGVWEIFLPNNTDGSPAIPHGSRVKIRMDTPSG 244
Query: 210 IWVDRIPAWIRYATVDPSNFGAPYDGVYWDPPASERYQFEYPRPPKPRAPRIYEAHVGMS 269
I D IPAWI+++ P P++G+Y+DPP E+Y F++P+P +P++ RIYEAHVGMS
Sbjct: 245 I-KDSIPAWIKFSVQAPGEI--PFNGIYYDPPEEEKYVFKHPQPKRPKSLRIYEAHVGMS 301
Query: 270 SSEPRVNTYREFADDVLPRIRANNYNTVQLMAVMEHSYYGSFGYHVTNFFAVSSRSGTPE 329
S+EP VNTY F DDVLPRI+ YN VQ+MA+ EHSYY SFGYHVTNFFA SSR GTPE
Sbjct: 302 STEPMVNTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRCGTPE 361
Query: 330 DLKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSSQESYFHTGDRGYHKLWDS 389
+LK LID+AH LGL VLMD++HSHAS N DGLN FD + YFH+G RGYH +WDS
Sbjct: 362 ELKSLIDRAHELGLVVLMDIVHSHASKNTLDGLNMFD---GTDAHYFHSGPRGYHWMWDS 418
Query: 390 RLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGIDMAFTG 440
RLFNY +WEVLR+LLSN RWWLEEYKFDGFRFDGVTSM+Y HHG+ + FTG
Sbjct: 419 RLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLSVGFTG 469
>AT3G20440.2 | Symbols: EMB2729, BE1 | alpha-amylase/ catalytic/
cation binding | chr3:7123603-7130364 REVERSE
Length = 899
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 160/242 (66%), Gaps = 6/242 (2%)
Query: 192 PAIPHNSRVKFRFKHGNGIWVDRIPAWIRYATVDPSNFGAPYDGVYWDPPASERYQFEYP 251
PA+PH S+ + F +G ++R+PAW Y V P + G ++W+P Y+++Y
Sbjct: 334 PAVPHGSKYRLYFNTPDGP-LERVPAWATY--VQPEDEGKQAYAIHWEPSPEAAYKWKYS 390
Query: 252 RPPKPRAPRIYEAHVGMSSSEPRVNTYREFADDVLPRIRANNYNTVQLMAVMEHSYYGSF 311
+P P + RIYE HVG+S SEP+V+T+ EF VLP ++ YN +QL+ V EH Y +
Sbjct: 391 KPKVPESLRIYECHVGISGSEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVPEHKDYFTV 450
Query: 312 GYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSS 371
GY VTNFFA SSR GTP+D K L+D+AH LGL V +D++HS+A+ + GL+ FD S
Sbjct: 451 GYRVTNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADQMVGLSLFD---GS 507
Query: 372 QESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHH 431
+ YFH G RG+HK W +R+F Y + +VL FL+SNL WW+ EY+ DG++F + SM+Y H
Sbjct: 508 NDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQFHSLASMIYTH 567
Query: 432 HG 433
+G
Sbjct: 568 NG 569
>AT3G20440.1 | Symbols: EMB2729, BE1 | alpha-amylase/ catalytic/
cation binding | chr3:7123603-7130364 REVERSE
Length = 869
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 142/242 (58%), Gaps = 36/242 (14%)
Query: 192 PAIPHNSRVKFRFKHGNGIWVDRIPAWIRYATVDPSNFGAPYDGVYWDPPASERYQFEYP 251
PA+PH S+ + F +G ++R+PAW Y V P + G ++W+P Y+++Y
Sbjct: 334 PAVPHGSKYRLYFNTPDGP-LERVPAWATY--VQPEDEGKQAYAIHWEPSPEAAYKWKYS 390
Query: 252 RPPKPRAPRIYEAHVGMSSSEPRVNTYREFADDVLPRIRANNYNTVQLMAVMEHSYYGSF 311
+P P + RIYE HVG+S SEP+V+T+ EF
Sbjct: 391 KPKVPESLRIYECHVGISGSEPKVSTFEEFTK---------------------------- 422
Query: 312 GYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSS 371
VTNFFA SSR GTP+D K L+D+AH LGL V +D++HS+A+ + GL+ FD S
Sbjct: 423 --KVTNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADQMVGLSLFD---GS 477
Query: 372 QESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHH 431
+ YFH G RG+HK W +R+F Y + +VL FL+SNL WW+ EY+ DG++F + SM+Y H
Sbjct: 478 NDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQFHSLASMIYTH 537
Query: 432 HG 433
+G
Sbjct: 538 NG 539
>AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
putative / starch debranching enzyme, putative |
chr1:813975-816623 FORWARD
Length = 882
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 331 LKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSSQESYFHTGDRGYHKLWDSR 390
+K ++ K HS G+ VL++V+ +H ++ + L G D SY++ +G DS+
Sbjct: 448 MKVMVKKLHSEGIEVLLEVVFTHTAD--SGALRGID-----DSSYYY---KGRANDLDSK 497
Query: 391 LFNYANWEVLR-FLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGIDMA 437
+ N+ V++ +L +LR+W+ E+ DGF F +S+L HG ++
Sbjct: 498 SYLNCNYPVVQQLVLESLRYWVTEFHVDGFCFINASSLLRGVHGEQLS 545
>AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
putative / starch debranching enzyme, putative |
chr1:813975-816623 FORWARD
Length = 882
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 331 LKYLIDKAHSLGLCVLMDVIHSHASNNVTDGLNGFDVGQSSQESYFHTGDRGYHKLWDSR 390
+K ++ K HS G+ VL++V+ +H ++ + L G D SY++ +G DS+
Sbjct: 448 MKVMVKKLHSEGIEVLLEVVFTHTAD--SGALRGID-----DSSYYY---KGRANDLDSK 497
Query: 391 LFNYANWEVLR-FLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGIDMA 437
+ N+ V++ +L +LR+W+ E+ DGF F +S+L HG ++
Sbjct: 498 SYLNCNYPVVQQLVLESLRYWVTEFHVDGFCFINASSLLRGVHGEQLS 545
>AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3);
alpha-amylase/ isoamylase | chr4:5784099-5788839 FORWARD
Length = 764
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 48/213 (22%)
Query: 248 FEYPRPPKPRAPRIYEAHVGM------SSSEPRVN-TYREFADDVLPRIRANNYNTVQLM 300
+++P P+ + IYE +V S +P + +Y F + + P ++ N V+L+
Sbjct: 226 YKFPNIPE-KDLVIYEMNVRAFTADESSGMDPAIGGSYLGFIEKI-PHLQDLGINAVELL 283
Query: 301 AVMEHS-------------YYGSFGYHVTNFFAVSSRSGTPE--------DLKYLIDKAH 339
V E ++GY NFFA SR + E + K ++ H
Sbjct: 284 PVFEFDELELQRRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALH 343
Query: 340 SLGLCVLMDVIHSHASNNVTDGLNGFDVGQSSQESYFHTGDRGYHKL-WDSRLFNYANW- 397
S G+ V++DV+++H N D S+ ++ Y+ L +++L N++
Sbjct: 344 SAGIEVILDVVYNHT--------NEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCG 395
Query: 398 --------EVLRFLLSNLRWWLEEYKFDGFRFD 422
V+ +L +LR W+ EY DGFRFD
Sbjct: 396 NTLNCNHPVVMELILDSLRHWVTEYHVDGFRFD 428
>AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1);
alpha-amylase/ isoamylase | chr2:16666078-16672183
FORWARD
Length = 783
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 33/193 (17%)
Query: 261 IYEAHV-GMSSSEPRV----NTYREFADDVLPRIRANNYNTVQLMAVME------HSYYG 309
IYE HV G + E TY+ A+ L ++ N ++LM E +SY
Sbjct: 220 IYEMHVRGFTRHESSKIEFPGTYQGVAEK-LDHLKELGINCIELMPCHEFNELEYYSYNT 278
Query: 310 SFGYHVTNFFAVSS------------------RSGTPEDLKYLIDKAHSLGLCVLMDVIH 351
G H NF+ S+ + K L+ +AH G+ V+MDV+
Sbjct: 279 ILGDHRVNFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVL 338
Query: 352 SHASNNVTDGLNGFDVGQSSQESYFHTGDRG--YHKLWDSRLFNYANWEVLRFLLSNLRW 409
+H + G F Y+ +G Y+ FN + V +F+L LR+
Sbjct: 339 NHTAEGNEKG-PIFSFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRY 397
Query: 410 WLEEYKFDGFRFD 422
W+ E DGFRFD
Sbjct: 398 WVTEMHVDGFRFD 410