Jatropha Genome Database
- JcCB0144231.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0144231.10 + phase: 1 /pseudo/partial
(719 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 950 0.0
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 547 e-156
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 533 e-151
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 519 e-147
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 515 e-146
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 514 e-146
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 513 e-145
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 508 e-144
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 507 e-143
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 502 e-142
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 499 e-141
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 498 e-141
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 497 e-140
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 495 e-140
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 493 e-139
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 481 e-135
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 476 e-134
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 475 e-134
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 470 e-132
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 468 e-132
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 464 e-131
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 464 e-130
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 462 e-130
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 459 e-129
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 458 e-129
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 457 e-128
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 450 e-126
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 450 e-126
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 449 e-126
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 448 e-126
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 443 e-124
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 442 e-124
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 442 e-124
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 441 e-124
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 437 e-123
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 437 e-122
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 437 e-122
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 437 e-122
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 435 e-122
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 428 e-120
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 427 e-120
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 425 e-119
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 425 e-119
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-118
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 422 e-118
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 420 e-117
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 416 e-116
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 415 e-116
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 414 e-116
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 413 e-115
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 408 e-114
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 407 e-113
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 405 e-113
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 404 e-113
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 404 e-112
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 396 e-110
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-109
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 394 e-109
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 392 e-109
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 390 e-108
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 390 e-108
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 380 e-105
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 379 e-105
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 377 e-104
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 376 e-104
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 374 e-104
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 368 e-102
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 365 e-101
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 365 e-101
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 358 9e-99
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 357 1e-98
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 6e-98
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 8e-98
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 2e-97
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 352 6e-97
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 351 8e-97
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 350 1e-96
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 3e-96
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 1e-95
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 2e-95
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 346 4e-95
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 9e-95
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 1e-94
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 341 8e-94
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 339 5e-93
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 1e-92
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 2e-92
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 2e-92
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 2e-92
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 336 4e-92
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 335 5e-92
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 335 6e-92
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 2e-91
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 332 4e-91
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 8e-91
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 2e-90
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 9e-90
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 9e-90
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 6e-89
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 4e-88
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 5e-88
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 1e-87
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 319 4e-87
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 319 4e-87
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 6e-87
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 6e-87
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 8e-87
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 9e-87
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 2e-86
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 3e-86
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 3e-86
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 5e-86
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 1e-85
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 3e-83
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 3e-83
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 1e-82
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 6e-82
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 7e-82
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 2e-80
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 3e-80
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 3e-80
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 4e-79
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 288 9e-78
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 284 1e-76
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 4e-76
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 4e-76
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 6e-75
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 1e-74
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 2e-74
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 9e-74
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 2e-73
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 2e-73
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 271 1e-72
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 1e-72
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 2e-71
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 6e-69
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 1e-66
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 4e-66
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 4e-66
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 1e-65
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 2e-65
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 244 2e-64
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 4e-64
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 241 1e-63
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 241 2e-63
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 3e-63
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 7e-62
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 2e-59
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 4e-59
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 224 1e-58
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 5e-57
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 8e-56
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 2e-55
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 3e-54
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 199 6e-51
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 2e-48
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 4e-39
AT1G47580.1 | Symbols: | lipoyltransferase, putative | chr1:174... 134 1e-31
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 9e-30
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 3e-28
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 3e-28
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 120 3e-27
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 117 3e-26
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 6e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 114 2e-25
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 112 8e-25
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 9e-25
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 7e-24
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 108 9e-24
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 108 2e-23
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 108 2e-23
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 107 3e-23
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 107 3e-23
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 105 1e-22
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 6e-22
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 102 7e-22
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 9e-22
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 99 1e-20
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 97 3e-20
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 97 3e-20
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 97 5e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 5e-20
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 95 1e-19
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 94 2e-19
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 6e-18
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 87 3e-17
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 85 1e-16
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 83 5e-16
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 79 9e-15
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 3e-14
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 77 4e-14
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 77 4e-14
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 76 8e-14
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 74 3e-13
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 72 1e-12
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 69 1e-11
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 1e-11
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 68 3e-11
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 67 5e-11
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 65 1e-10
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 64 3e-10
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 5e-10
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 62 1e-09
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 59 2e-08
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 58 2e-08
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 58 2e-08
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 55 2e-07
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 55 2e-07
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 4e-07
AT3G46870.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 54 5e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-07
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 51 3e-06
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 3e-06
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/696 (64%), Positives = 557/696 (80%), Gaps = 6/696 (0%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SNVFV NA+V MY RC +L AR++FDEM ++D+VSWNS++ +Y + G K AL +F
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEM---SVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+M + + D ++LVNVLP AS+G+ GKQ+H FAV S + +++FVGN LVDMY
Sbjct: 217 SRMTN--EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
AKCGMM EA+ VF M KDVVSWNAMV GYS IG FE+A+ LFE+M+EE I++DVV+WS
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
I+GYAQ+GLGYEAL V RQM S KPNEVTL+S+LSGCASVGAL+HGKE HCY IK
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 265 ILNYDRCDQ-DELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
++ + DE +VIN +IDMY KCK + ARA+FDS++PK+R+VVTWT MIGGY+QHG
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+AN +LEL S+M ++D +PNAFTISC+L+ACA LAALR G++IHAY LRNQ ++ L+
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
V+NCLID Y+K G I AR+VFDNM KN V+WTSL+TGYGMHG GEEA+ +F+EMR+ G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
DG+T LV+LYACSHSGM+D+G++YF+ M +GV PG EHYAC+VDLLGRAGRL+ A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 504 MKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
++LIE MPM+P VVWVA LS CR H V+LGE+AA K+ EL S +DGSYTLLSN+YANA
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRI 623
RWKDVTRIRSLM+H G+KKRPGCSWV+G KGT TFFVGD+THP ++ +Y +L + +QRI
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 624 KVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCH 683
K +GYVPET FALHDVDDEEK DLLF+HSEKLALAYGILT+ G IRITKNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 684 TAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
TA +Y+S II H+IILRDSSRFHHFKNGSCSC+ YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 247/542 (45%), Gaps = 94/542 (17%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+++ Y G L HA + S+ + WNS++ +Y +G L LF M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDA-GVYHWNSLIRSYGDNGCANKCLYLFGLMHSL-- 121
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
D + V A + S G+ H ++ +G +VFVGN+LV MY++C + +
Sbjct: 122 -SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A KVF+ M DVVSWN+++ Y+ +G + AL +F +M E
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE------------------ 222
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
G +P+ +TLV++L CAS+G GK+ HC+ + +
Sbjct: 223 --FG--------------CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM------ 260
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
+ V N ++DMY KC + A +F +++ KD VV+W AM+ GY+Q G D++ LF
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD--VVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 333 SQM----LKQD-----------------------------RSVKPNAFTISCSLMACARL 359
+M +K D +KPN T+ L CA +
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 360 AALRSGREIHAYVLRNQYD------SDVLYVANCLIDTYSKSGDIDVARVVFDNM--KHK 411
AL G+EIH Y ++ D D V N LID Y+K +D AR +FD++ K +
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 412 NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG--LLPDGITFLVMLYACSHSGMVDEG-- 467
+ V+WT +I GY HG +A+++ EM +E P+ T L AC+ + G
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
I ++ +++ V + C++D+ + G + A + + M M +V W +L++G
Sbjct: 499 IHAYALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYG 555
Query: 528 KH 529
H
Sbjct: 556 MH 557
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 547 bits (1409), Expect = e-156, Method: Compositional matrix adjust.
Identities = 299/763 (39%), Positives = 448/763 (58%), Gaps = 80/763 (10%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
+V++SN+ + + MY CG L A ++FDE+ +I + WN ++ +SGD +
Sbjct: 125 FVIDSNL--GSKLSLMYTNCGDLKEASRVFDEV---KIEKALFWNILMNELAKSGDFSGS 179
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+GLF+KM + +++D+ + V +F+S+ S G+Q+HGF ++SG E VGNSL
Sbjct: 180 IGLFKKM---MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
V Y K + A KVF+ M ++DV+SWN+++ GY G+ E L++F QM IE+D+
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 201 VSWSTVIAG-----------------------------------YAQKGLGYEALNVFRQ 225
+ +V AG Y++ G A VFR+
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGAL-----------IHGKETHCYTIKCILN----YDR 270
M S + V+ S+++G A G G YT+ +LN Y
Sbjct: 357 M----SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 271 CDQD--------------ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
D+ ++ V NA++DMY KC S+ A +F + KD +++W +I
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD--IISWNTII 470
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
GGY+++ AN++L LF+ +L++ R P+ T++C L ACA L+A GREIH Y++RN
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKR-FSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
Y SD +VAN L+D Y+K G + +A ++FD++ K+ VSWT +I GYGMHG G+EA+ +F
Sbjct: 530 YFSD-RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+MR+ G+ D I+F+ +LYACSHSG+VDEG ++F+ M E + P EHYAC+VD+L R
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
G L KA + IE MP+ P +W ALL GCR H +VKL E A K+ ELE EN G Y L+
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
+NIYA A +W+ V R+R + G++K PGCSW++ K F GD ++P++E + A L
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
Query: 617 TELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNL 676
++ R+ GY P T +AL D ++ EK + L HSEKLA+A GI++S G+ IR+TKNL
Sbjct: 769 RKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNL 828
Query: 677 RVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
RVCGDCH ++S + + EI+LRDS+RFH FK+G CSCR +W
Sbjct: 829 RVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 241/530 (45%), Gaps = 81/530 (15%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N+ + + +SG+ ++A+ L V +D +L +VL A S GK+V F
Sbjct: 65 NTQLRRFCESGNLENAVKLL-----CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNF 119
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
+G D +G+ L MY CG + EAS+VF+ ++ + + WN ++ + G F +
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 179
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYA----------------QKGLGYE---------- 218
+ LF++M +E+D ++S V ++ + G G
Sbjct: 180 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 219 ---------ALNVFRQMQSCHSKPNEVTLVSLLSGCASVG-----------ALIHGKETH 258
A VF +M ++ + ++ S+++G S G L+ G E
Sbjct: 240 YLKNQRVDSARKVFDEM----TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 259 CYTIKCI------------------LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
TI + + C E N ++DMY+KC + A+A+F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
++ DR+VV++T+MI GYA+ G A ++++LF +M ++ + P+ +T++ L CAR
Sbjct: 356 EMS--DRSVVSYTSMIAGYAREGLAGEAVKLFEEM--EEEGISPDVYTVTAVLNCCARYR 411
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
L G+ +H ++ N D+ +V+N L+D Y+K G + A +VF M+ K+ +SW ++I
Sbjct: 412 LLDEGKRVHEWIKENDLGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLL-PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
GY + EA+ +F + +E PD T +L AC+ D+G + + + G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN-G 529
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+VD+ + G L A L + + K V W +++G H
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD-LVSWTVMIAGYGMH 578
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 150/314 (47%), Gaps = 37/314 (11%)
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID-----MYTKCKS 291
TL S+L CA +L GKE N+ R + VI++ + MYT C
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVD--------NFIRGNG---FVIDSNLGSKLSLMYTNCGD 144
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
+ A +FD V K + W ++ A+ G+ + S+ LF +M+ V+ +++T SC
Sbjct: 145 LKEASRVFDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS--GVEMDSYTFSC 200
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK 411
+ + L ++ G ++H ++L++ + + V N L+ Y K+ +D AR VFD M +
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGF-GERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 412 NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG---- 467
+ +SW S+I GY +G E+ + VF +M G+ D T + + C+ S ++ G
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 468 -IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
I +C S+E + ++D+ + G LD A + M + V + ++++G
Sbjct: 320 SIGVKACFSRE------DRFCNTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGY 372
Query: 527 RKH----ENVKLGE 536
+ E VKL E
Sbjct: 373 AREGLAGEAVKLFE 386
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust.
Identities = 288/755 (38%), Positives = 438/755 (58%), Gaps = 77/755 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V++ N ++ +Y + G HAR++FDEM F SWN++++AY + GD S F
Sbjct: 48 SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF---SWNTVLSAYSKRGDMDSTCEFFD 104
Query: 86 K----------------------------MWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
+ M +MV I+ +L NVL + A+
Sbjct: 105 QLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET 164
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GK+VH F V+ GL +V V NSL++MYAKCG A VF+RM +D+ SWNAM+ +
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPNEV 236
+G + A+ FEQM E D+V+W+++I+G+ Q+G AL++F +M + P+
Sbjct: 225 VGQMDLAMAQFEQMAER----DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
TL S+LS CA++ L GK+ H + + + +V+NA+I MY++C + AR
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISG------IVLNALISMYSRCGGVETAR 334
Query: 297 AIFDS-------------------------------VAPKDRNVVTWTAMIGGYAQHGEA 325
+ + V+ KDR+VV WTAMI GY QHG
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+++ LF M+ + +PN++T++ L + LA+L G++IH +++ V V+
Sbjct: 395 GEAINLFRSMVGGGQ--RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV-SVS 451
Query: 386 NCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N LI Y+K+G+I A FD ++ ++ VSWTS+I HG EEA+++FE M EGL
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD IT++ + AC+H+G+V++G +YF M +IP HYACMVDL GRAG L +A
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
+ IE MP++P V W +LLS CR H+N+ LG+ AA +LL LE EN G+Y+ L+N+Y+
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+W++ +IR MK +KK G SW++ K F V D THP+ +Y + ++ IK
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 625 VLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHT 684
+GYVP+T+ LHD+++E K +L HSEKLA+A+G++++ +RI KNLRVC DCHT
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 685 AISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
AI +IS ++ EII+RD++RFHHFK+G CSCR+YW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 218/437 (49%), Gaps = 50/437 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF----------------------- 59
L NV V N+++ MY +CG A+ +FD M +I
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 60 -----DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS 114
D+V+WNSM++ + Q G AL +F KM + D + D +L +VL A A++
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKM--LRDSLLSPDRFTLASVLSACANLEK 294
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD--VVSWNAMV 172
GKQ+H V +G V N+L+ MY++CG + A ++ E+ KD + + A++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
GY +G A +F +++ DVV+W+ +I GY Q G EA+N+FR M +
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
PN TL ++LS +S+ +L HGK+ H +K Y + V NA+I MY K +I
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY------SVSVSNALITMYAKAGNI 464
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+ A FD + +R+ V+WT+MI AQHG A ++LELF ML + ++P+ T
Sbjct: 465 TSASRAFDLIRC-ERDTVSWTSMIIALAQHGHAEEALELFETMLME--GLRPDHITYVGV 521
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVAN--CLIDTYSKSGDIDVARVVFDNMK- 409
AC + GR+ + + D + +++ C++D + ++G + A+ + M
Sbjct: 522 FSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPI 579
Query: 410 HKNAVSWTSLITGYGMH 426
+ V+W SL++ +H
Sbjct: 580 EPDVVTWGSLLSACRVH 596
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 236/520 (45%), Gaps = 107/520 (20%)
Query: 103 VNVLPAFASMGSWWFGKQ-VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
N+L + + F Q VH ++SGL V++ N+L+++Y+K G A K+F+ M
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
+ SWN +++ YS G ++ F+Q+ + D VSW+T+I GY G ++A+
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIR 132
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
V M +P + TL ++L+ A+ + GK+ H + +K L + + V N+
Sbjct: 133 VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL------RGNVSVSNS 186
Query: 282 IIDMYTKCKSISVARAIFDSVAPKD-----------------------------RNVVTW 312
+++MY KC +A+ +FD + +D R++VTW
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 313 TAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV 372
+MI G+ Q G +L++FS+ML+ D + P+ FT++ L ACA L L G++IH+++
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLR-DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 373 LRNQYD-SDVLYVA-------------------------------NCLIDTYSKSGDIDV 400
+ +D S ++ A L+D Y K GD++
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 401 ARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS- 459
A+ +F ++K ++ V+WT++I GY HG EA+ +F M G P+ T ML S
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 460 ----------HSGMVDEGIKY-----------------FSCMSKEYGVIPGEE---HYAC 489
H V G Y + S+ + +I E +
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 490 MVDLLGRAGRLDKAMKLIEGMPM---KPGQVVWVALLSGC 526
M+ L + G ++A++L E M M +P + +V + S C
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/694 (39%), Positives = 415/694 (59%), Gaps = 53/694 (7%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++F + MY +C ++ AR++FD M + DLVSWN++VA Y Q+G + AL + +
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
M E +++ +++V+VLPA +++ GK++HG+A+RSG V + +LVDMYA
Sbjct: 226 SMCEE---NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + E A LF+ M E N VVSW++
Sbjct: 283 KCGSL-------------------------------ETARQLFDGMLERN----VVSWNS 307
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I Y Q EA+ +F++M KP +V+++ L CA +G L G+ H +++
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE-- 365
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
L DR + V+N++I MY KCK + A ++F + + R +V+W AMI G+AQ+G
Sbjct: 366 LGLDR----NVSVVNSLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMILGFAQNGRP 419
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
D+L FSQM + R+VKP+ FT + A A L+ + IH V+R+ D +V +V
Sbjct: 420 IDALNYFSQM--RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV-FVT 476
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
L+D Y+K G I +AR++FD M ++ +W ++I GYG HG G+ A+++FEEM+K +
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+G+TFL ++ ACSHSG+V+ G+K F M + Y + +HY MVDLLGRAGRL++A
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
I MP+KP V+ A+L C+ H+NV E AA +L EL ++ G + LL+NIY A
Sbjct: 597 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 656
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
W+ V ++R M G++K PGCS V+ K +FF G HP S+++YA L +LI IK
Sbjct: 657 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
GYVP+T+ L V+++ K LL HSEKLA+++G+L + G I + KNLRVC DCH A
Sbjct: 717 AGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNA 775
Query: 686 ISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
YIS++ EI++RD RFHHFKNG+CSC +YW
Sbjct: 776 TKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 218/435 (50%), Gaps = 56/435 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S V + A+V MY +CG+L+ ARQ+FD M + + VSWNSM+ AYVQ+ + K A+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV---VSWNSMIDAYVQNENPKEAML 323
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+FQKM +D ++ VS++ L A A +G G+ +H +V GL +V V NSL+
Sbjct: 324 IFQKM---LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KC + A+ +F ++Q + +VSWNAM+ G++ G +AL F QMR ++ D +
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ +VI A+ + + H K H +
Sbjct: 441 YVSVITAIAELSITH-----------------------------------HAKWIHGVVM 465
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ C + V A++DMY KC +I +AR IFD ++ +R+V TW AMI GY H
Sbjct: 466 RS------CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS--ERHVTTWNAMIDGYGTH 517
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV- 381
G +LELF +M Q ++KPN T + AC+ + +G + Y+++ Y ++
Sbjct: 518 GFGKAALELFEEM--QKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELS 574
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEMR 440
+ ++D ++G ++ A M K AV+ + +++ +H A K E +
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 441 KEGLLPDGITFLVML 455
+ L PD + V+L
Sbjct: 635 E--LNPDDGGYHVLL 647
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 200/407 (49%), Gaps = 48/407 (11%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
+Q+ ++GL+++ F LV ++ + G + EA++VFE + K V ++ M+ G++ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
+LD +AL F +M+ +P
Sbjct: 114 S-----------------DLD------------------KALQFFVRMRYDDVEPVVYNF 138
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
LL C L GKE H +K + D L + + +MY KC+ ++ AR +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLD------LFAMTGLENMYAKCRQVNEARKV 192
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
FD + +R++V+W ++ GY+Q+G A +LE+ M +++ +KP+ TI L A +
Sbjct: 193 FDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN--LKPSFITIVSVLPAVSA 248
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
L + G+EIH Y +R+ +DS ++ ++ L+D Y+K G ++ AR +FD M +N VSW S
Sbjct: 249 LRLISVGKEIHGYAMRSGFDS-LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I Y + +EA+ +F++M EG+ P ++ + L+AC+ G ++ G ++ +S E
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVEL 366
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G+ ++ + + +D A + G V W A++ G
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMF-GKLQSRTLVSWNAMILG 412
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/692 (38%), Positives = 405/692 (58%), Gaps = 45/692 (6%)
Query: 61 LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
+ S++S++ A ++ ++G+F +M+ + D+ L N+ A + ++ GKQ
Sbjct: 81 IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP---DSHVLPNLFKVCAELSAFKVGKQ 137
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
+H + SGL D FV S+ MY +CG M +A KVF+RM KDVV+ +A++ Y+ G
Sbjct: 138 IHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGC 197
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
E + + +M IE ++VSW+ +++G+ + G EA+ +F+++ P++VT+ S
Sbjct: 198 LEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSS 257
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+L L G+ H Y IK L D+C VI+A+IDMY K + ++F+
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC------VISAMIDMYGKSGHVYGIISLFN 311
Query: 301 SV---------------------------------APKDRNVVTWTAMIGGYAQHGEAND 327
+ NVV+WT++I G AQ+G+ +
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+LELF +M Q VKPN TI L AC +AAL GR H + +R +V +V +
Sbjct: 372 ALELFREM--QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-HVGSA 428
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
LID Y+K G I+++++VF+ M KN V W SL+ G+ MHG+ +E + +FE + + L PD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
I+F +L AC G+ DEG KYF MS+EYG+ P EHY+CMV+LLGRAG+L +A LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
+ MP +P VW ALL+ CR NV L E AA KL LE EN G+Y LLSNIYA W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLG 627
+V IR+ M+ G+KK PGCSW+Q K T GD++HPQ +++ + E+ + ++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 628 YVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAIS 687
+ P FALHDV+++E+ +L+ HSEKLA+ +G+L + G P+++ KNLR+CGDCH I
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 688 YISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+IS EI +RD++RFHHFK+G CSC ++W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 224/432 (51%), Gaps = 46/432 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF----------------------- 59
L+ + FV ++ MY RCG + AR++FD M ++
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 60 ---------DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFA 110
++VSWN +++ + +SG K A+ +FQK+ + D V++ +VLP+
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL---GFCPDQVTVSSVLPSVG 263
Query: 111 SMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNA 170
G+ +HG+ ++ GL +D V ++++DMY K G ++ +F + + + NA
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+TG S G+ + AL +FE +E+ +EL+VVSW+++IAG AQ G EAL +FR+MQ
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
KPN VT+ S+L C ++ AL HG+ TH + ++ L D + V +A+IDMY KC
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL------LDNVHVGSALIDMYAKCG 437
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
I++++ +F+ + K N+V W +++ G++ HG+A + + +F +++ +KP+ + +
Sbjct: 438 RINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRT--RLKPDFISFT 493
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK- 409
L AC ++ G + + L +C+++ ++G + A + M
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
Query: 410 HKNAVSWTSLIT 421
++ W +L+
Sbjct: 554 EPDSCVWGALLN 565
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 188/481 (39%), Gaps = 112/481 (23%)
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
Q H ++SG D ++ L+ Y+ ++A V + + + S+++++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
+F +++ VF +M S P+ L
Sbjct: 96 LFT-----------------------------------QSIGVFSRMFSHGLIPDSHVLP 120
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+L CA + A GK+ HC + C+ D + V ++ MY +C + AR +F
Sbjct: 121 NLFKVCAELSAFKVGKQIHC--VSCVSGLDM----DAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 300 DSVAPKD---------------------------------RNVVTWTAMIGGYAQHGEAN 326
D ++ KD N+V+W ++ G+ + G
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR------------ 374
+++ +F ++ P+ T+S L + L GR IH YV++
Sbjct: 235 EAVVMFQKI--HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 375 ------------------NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----N 412
NQ++ V N I S++G +D A +F+ K + N
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
VSWTS+I G +G+ EA+++F EM+ G+ P+ +T ML AC + + G +
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-RSTH 411
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
+ ++ + ++D+ + GR++ + + MP K V W +L++G H
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKA 470
Query: 533 K 533
K
Sbjct: 471 K 471
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L NV V +A++ MY +CG ++ ++ +F+ M +LV WNS++ + G K +
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK---NLVCWNSLMNGFSMHGKAKEVMS 475
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMG----SWWFGKQVHGFAVRSGLFEDVFVGN 138
+F+ ++ ++ D +S ++L A +G W + K + + G+ + +
Sbjct: 476 IFE---SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM---SEEYGIKPRLEHYS 529
Query: 139 SLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+V++ + G + EA + + M + D W A++ +N + L E E+
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR----LQNNVDLAEIAAEKLFH 585
Query: 198 LDVVSWSTVIAG---YAQKGLGYEALNVFRQMQSCHSKPN 234
L+ + T + YA KG+ E ++ +M+S K N
Sbjct: 586 LEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 514 bits (1325), Expect = e-146, Method: Compositional matrix adjust.
Identities = 263/698 (37%), Positives = 417/698 (59%), Gaps = 21/698 (3%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ N+F N ++ Y + G + F+++ D V+WN ++ Y SG +A+
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR---DGVTWNVLIEGYSLSGLVGAAV 123
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+ M M D L V+L+ +L +S G GKQ+HG ++ G + VG+ L+
Sbjct: 124 KAYNTM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 181
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
MYA G + +A KVF + ++ V +N+++ G GM E+AL LF M E D V
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSV 236
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
SW+ +I G AQ GL EA+ FR+M+ K ++ S+L C +GA+ GK+ H
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA-- 294
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
CI+ + QD + V +A+IDMY KCK + A+ +FD + K +NVV+WTAM+ GY Q
Sbjct: 295 --CIIRTNF--QDHIYVGSALIDMYCKCKCLHYAKTVFDRM--KQKNVVSWTAMVVGYGQ 348
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G A +++++F M Q + P+ +T+ ++ ACA +++L G + H + + V
Sbjct: 349 TGRAEEAVKIFLDM--QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
V+N L+ Y K GDID + +F+ M ++AVSWT++++ Y G+ E +++F++M +
Sbjct: 407 T-VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
GL PDG+T ++ ACS +G+V++G +YF M+ EYG++P HY+CM+DL R+GRL+
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+AM+ I GMP P + W LLS CR N+++G++AA L+EL+ + YTLLS+IYA
Sbjct: 526 EAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
+ +W V ++R M+ +KK PG SW++ K +F D + P +++YA L EL
Sbjct: 586 SKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNN 645
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
+I GY P+TSF HDV++ K +L HSE+LA+A+G++ G+PIR+ KNLRVC D
Sbjct: 646 KIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVD 705
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CH A +IS + EI++RD+ RFH FK+G+CSC ++W
Sbjct: 706 CHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 219/441 (49%), Gaps = 56/441 (12%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K +HG +R+ + + F+ N++V YA A +VF+R+ + ++ SWN ++ YS
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ-MQSCHSKPNEVT 237
G+ + FE++ + D V+W+ +I GY+ GL A+ + M+ + VT
Sbjct: 86 GLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L+++L +S G + GK+ H IK + LLV + ++ MY IS A+
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGF------ESYLLVGSPLLYMYANVGCISDAKK 195
Query: 298 IFDSVAPKDRNV------------------------------VTWTAMIGGYAQHGEAND 327
+F + DRN V+W AMI G AQ+G A +
Sbjct: 196 VFYGL--DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
++E F +M Q +K + + L AC L A+ G++IHA ++R + D +YV +
Sbjct: 254 AIECFREMKVQ--GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ-DHIYVGSA 310
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
LID Y K + A+ VFD MK KN VSWT+++ GYG G+ EEAVK+F +M++ G+ PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC----MVDLLGRAGRLDKA 503
T + AC++ ++EG ++ + G HY +V L G+ G +D +
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHG-----KAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 504 MKLIEGMPMKPGQVVWVALLS 524
+L M ++ V W A++S
Sbjct: 426 TRLFNEMNVRDA-VSWTAMVS 445
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 6/212 (2%)
Query: 17 CLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD 76
C++ +++V +A++ MY +C L +A+ +FD M + + VSW +MV Y Q+G
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV---VSWTAMVVGYGQTGR 351
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
+ A+ +F +M I D +L + A A++ S G Q HG A+ SGL V V
Sbjct: 352 AEEAVKIF---LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
NSLV +Y KCG + +++++F M +D VSW AMV+ Y+ G + LF++M + +
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
+ D V+ + VI+ ++ GL + F+ M S
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 350 SCSLMACARLAALRSGRE---IHAYVLRN-QYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
S + C L A R IH ++R Y LY N ++ Y+ AR VF
Sbjct: 7 SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLY--NNIVHAYALMKSSTYARRVF 64
Query: 406 DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVD 465
D + N SW +L+ Y G E FE++ DG+T+ V++ S SG+V
Sbjct: 65 DRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVG 120
Query: 466 EGIKYFSCMSKEY 478
+K ++ M +++
Sbjct: 121 AAVKAYNTMMRDF 133
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 287/756 (37%), Positives = 429/756 (56%), Gaps = 81/756 (10%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK-- 86
+ N ++ +Y + L++ARQ+FDE+ + D ++ +MV+ Y SGD A G+F+K
Sbjct: 51 ILNRLIDVYCKSSELNYARQLFDEISEP---DKIARTTMVSGYCASGDITLARGVFEKAP 107
Query: 87 --MWEMVDVDIQL-------DAVSLVNVL---------PAFASMGSWWFG---------- 118
M + V + + D S +N+ P + S G
Sbjct: 108 VCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQ 167
Query: 119 -KQVHGFAVRSGLFEDVFVGNSLVDMYAKCG----MMHEASKVFERMQKKDVVSWNAMVT 173
Q H A++SG V N+LV +Y+KC ++H A KVF+ + +KD SW M+T
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 174 GYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
GY G F+ L E M ++N++L V+++ +I+GY +G EAL + R+M S +
Sbjct: 228 GYVKNGYFDLGEELLEGM-DDNMKL--VAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 234 NEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
+E T S++ CA+ G L GK+ H Y + R + N+++ +Y KC
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVL-------RREDFSFHFDNSLVSLYYKCGKFD 337
Query: 294 VARAIFDSVAPKD-----------------------------RNVVTWTAMIGGYAQHGE 324
ARAIF+ + KD +N+++W MI G A++G
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ L+LFS M ++ +P + S ++ +CA L A +G++ HA +L+ +DS L
Sbjct: 398 GEEGLKLFSCMKRE--GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS-LSA 454
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N LI Y+K G ++ AR VF M ++VSW +LI G HG G EAV V+EEM K+G+
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD IT L +L ACSH+G+VD+G KYF M Y + PG +HYA ++DLL R+G+ A
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
+IE +P KP +W ALLSGCR H N++LG AA+KL L E+DG+Y LLSN++A
Sbjct: 575 SVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATG 634
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+W++V R+R LM+ G+KK CSW++ + TF V D +HP++E +Y L +L + ++
Sbjct: 635 QWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Query: 625 VLGYVPETSFALHDVD-DEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCH 683
LGYVP+TSF LHDV+ D K D+L HSEK+A+A+G++ PG IRI KNLR CGDCH
Sbjct: 695 RLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCH 754
Query: 684 TAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
++S ++Q +IILRD RFHHF+NG CSC N+W
Sbjct: 755 NFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 194/407 (47%), Gaps = 67/407 (16%)
Query: 114 SWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVT 173
S + VHG + G + N L+D+Y K ++ A ++F+ + + D ++ MV+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 174 GYSHIGMFENALTLFEQ----MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSC 229
GY G A +FE+ MR D V ++ +I G++ GY A+N+F +M+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMR------DTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 230 HSKPNEVTLVSLLSGCASVGALIHGKETHCY-----TIKCILNYDRCDQDELLVINAIID 284
KP+ T S+L+G AL+ E C +K Y V NA++
Sbjct: 143 GFKPDNFTFASVLAGL----ALVADDEKQCVQFHAAALKSGAGYITS------VSNALVS 192
Query: 285 MYTKCKS----ISVARAIFDSVAPKDR------------------------------NVV 310
+Y+KC S + AR +FD + KD +V
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
+ AMI GY G ++LE+ +M+ ++ + FT + ACA L+ G+++HA
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSS--GIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
YVLR + S + N L+ Y K G D AR +F+ M K+ VSW +L++GY G
Sbjct: 311 YVLRREDFS--FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
EA +F+EM+++ +L ++++M+ + +G +EG+K FSCM +E
Sbjct: 369 EAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCMKRE 411
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S++ NA++TMY +CG ++ ARQ+F M D VSWN+++AA Q G A+
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTM---PCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
+++ EM+ I+ D ++L+ VL A G +F + + G D +
Sbjct: 505 VYE---EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG--ADHYA- 558
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVS-WNAMVTG 174
L+D+ + G +A V E + K W A+++G
Sbjct: 559 -RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
N + + L R +L+ R +H ++ + ++ N LID Y KS +++ AR +
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRA-HILNRLIDVYCKSSELNYARQL 71
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
FD + + ++ T++++GY G A VFE + + D + + M+ SH+
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFE--KAPVCMRDTVMYNAMITGFSHNNDG 129
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMV 491
I F C K G P +A ++
Sbjct: 130 YSAINLF-CKMKHEGFKPDNFTFASVL 155
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/706 (38%), Positives = 404/706 (57%), Gaps = 62/706 (8%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N F+ N +V MYG+ G L ++ + DLV+WN+++++ Q+ AL +
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGR---DLVTWNTVLSSLCQNEQLLEAL---E 288
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSG-LFEDVFVGNSLVDMY 144
+ EMV ++ D ++ +VLPA + + GK++H +A+++G L E+ FVG++LVDMY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
C + +VF+ M + + WNAM
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAM--------------------------------- 375
Query: 205 TVIAGYAQKGLGYEALNVFRQMQ-SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
IAGY+Q EAL +F M+ S N T+ ++ C GA + H + +K
Sbjct: 376 --IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
L+ DR V N ++DMY++ I +A IF + +DR++VTW MI GY
Sbjct: 434 RGLDRDR------FVQNTLMDMYSRLGKIDIAMRIFGKM--EDRDLVTWNTMITGYVFSE 485
Query: 324 EANDSLELFSQMLKQDR---------SVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
D+L L +M +R S+KPN+ T+ L +CA L+AL G+EIHAY ++
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVK 434
N +DV V + L+D Y+K G + ++R VFD + KN ++W +I YGMHG G+EA+
Sbjct: 546 NNLATDVA-VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLL 494
+ M +G+ P+ +TF+ + ACSHSGMVDEG++ F M +YGV P +HYAC+VDLL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 495 GRAGRLDKAMKLIEGMPMKPGQV-VWVALLSGCRKHENVKLGEFAANKLLELESENDGSY 553
GRAGR+ +A +L+ MP + W +LL R H N+++GE AA L++LE Y
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 554 TLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMY 613
LL+NIY++A W T +R MK G++K PGCSW++ F GD +HPQSE++
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 784
Query: 614 AILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRIT 673
L L +R++ GYVP+TS LH+V+++EK LL HSEKLA+A+GIL ++PG IR+
Sbjct: 785 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 674 KNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
KNLRVC DCH A +IS I+ EIILRD RFH FKNG+CSC +YW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 211/413 (51%), Gaps = 47/413 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ N FV +A+V MY C + R++FD M+ +I WN+M+A Y Q+ K AL
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG---LWNAMIAGYSQNEHDKEALL 390
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF M E + ++ ++ V+PA G++ + +HGF V+ GL D FV N+L+D
Sbjct: 391 LFIGMEE--SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY++ G + A ++F +M+ +D+V+WN M+TGY E+AL L +M +N+E V
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM--QNLERKV-- 504
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
KG +L KPN +TL+++L CA++ AL GKE H Y I
Sbjct: 505 ---------SKGASRVSL-----------KPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K L D + V +A++DMY KC + ++R +FD + K NV+TW +I Y H
Sbjct: 545 KNNLATD------VAVGSALVDMYAKCGCLQMSRKVFDQIPQK--NVITWNVIIMAYGMH 596
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY---DS 379
G ++++L M+ Q VKPN T AC+ + G I YV++ Y S
Sbjct: 597 GNGQEAIDLLRMMMVQ--GVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPS 653
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKH--KNAVSWTSLITGYGMHGQGE 430
Y C++D ++G I A + + M A +W+SL+ +H E
Sbjct: 654 SDHYA--CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE 704
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 245/520 (47%), Gaps = 67/520 (12%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V V N +V +Y +CG ++FD + + + VSWNS++++ + AL F+
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISER---NQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMG---SWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
M +D +++ + +LV+V+ A +++ GKQVH + +R G + F+ N+LV
Sbjct: 189 CM---LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVA 244
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY K G + + + +D+V+WN
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWN--------------------------------- 271
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
TV++ Q EAL R+M +P+E T+ S+L C+ + L GKE H Y +
Sbjct: 272 --TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K D++ V +A++DMY CK + R +FD + DR + W AMI GY+Q+
Sbjct: 330 K----NGSLDENS-FVGSALVDMYCNCKQVLSGRRVFDGMF--DRKIGLWNAMIAGYSQN 382
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
++L LF M ++ + N+ T++ + AC R A IH +V++ D D
Sbjct: 383 EHDKEALLLFIGM-EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD-R 440
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR-- 440
+V N L+D YS+ G ID+A +F M+ ++ V+W ++ITGY E+A+ + +M+
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 441 ---------KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
+ L P+ IT + +L +C+ + +G K + + + + +V
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALV 559
Query: 492 DLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
D+ + G L + K+ + +P K + W ++ H N
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 224/469 (47%), Gaps = 60/469 (12%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
W ++ + V+S + A+ + +M+ + I+ D + +L A A + GKQ+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYV---DMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 124 FAVRSGLFED-VFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE 182
+ G D V V N+LV++Y KCG KVF+R+ +++ VSWN++++
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS--------- 172
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
+L FE+ W AL FR M + +P+ TLVS++
Sbjct: 173 -SLCSFEK------------WEM-------------ALEAFRCMLDENVEPSSFTLVSVV 206
Query: 243 SGCASVG---ALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+ C+++ L+ GK+ H Y + R + +IN ++ MY K ++ ++ +
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGL-------RKGELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
S +D +VTW ++ Q+ + ++LE +M+ + V+P+ FTIS L AC+ L
Sbjct: 260 GSFGGRD--LVTWNTVLSSLCQNEQLLEALEYLREMVLE--GVEPDEFTISSVLPACSHL 315
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
LR+G+E+HAY L+N + +V + L+D Y + R VFD M + W ++
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 420 ITGYGMHGQGEEAVKVFEEMRKE-GLLPDGITFLVMLYACSHSGMVD--EGIKYFSCMSK 476
I GY + +EA+ +F M + GLL + T ++ AC SG E I F
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV--- 432
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ G+ ++D+ R G++D AM++ M + V W +++G
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 162/336 (48%), Gaps = 19/336 (5%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W ++ + L EA+ + M KP+ +LL A + + GK+ H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K Y D + V N ++++Y KC +FD ++ +RN V+W ++I
Sbjct: 125 K--FGYG---VDSVTVANTLVNLYRKCGDFGAVYKVFDRIS--ERNQVSWNSLISSLCSF 177
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA---ALRSGREIHAYVLRN-QYD 378
+ +LE F ML D +V+P++FT+ + AC+ L L G+++HAY LR + +
Sbjct: 178 EKWEMALEAFRCML--DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
S ++ N L+ Y K G + ++V+ + ++ V+W ++++ + Q EA++ E
Sbjct: 236 S---FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M EG+ PD T +L ACSH M+ G + + K + + +VD+
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 499 RLDKAMKLIEGM-PMKPGQVVWVALLSGCRKHENVK 533
++ ++ +GM K G +W A+++G ++E+ K
Sbjct: 353 QVLSGRRVFDGMFDRKIG--LWNAMIAGYSQNEHDK 386
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+KP+ + L A A L + G++IHA+V + Y D + VAN L++ Y K GD
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
VFD + +N VSW SLI+ + E A++ F M E + P T + ++ ACS+
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 462 GMVDEGIKYFSCMSKE---YGVIPGEEHYACMVDLLGRAGRLDK--AMKLIEGMPMKPGQ 516
M EG+ M K+ YG+ GE + + L+ G+L K + K++ G
Sbjct: 213 PM-PEGL----MMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 517 VVWVALLSG-CRKHENVKLGEFAANKLLE 544
V W +LS C+ + ++ E+ +LE
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 43/253 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++V V +A+V MY +CG L +R++FD++ + + ++WN ++ AY G+ + A+
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV---ITWNVIIMAYGMHGNGQEAID 604
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS-------WWFGKQVHGFAVRSGLFEDVF 135
L + M MV ++ + V+ ++V A + G ++ K +G S + V
Sbjct: 605 LLRMM--MVQ-GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV- 660
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQK--KDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
VD+ + G + EA ++ M + +W++++ G S I N L + E +
Sbjct: 661 -----VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASRI---HNNLEIGEIAAQ 711
Query: 194 ENIELD--VVSWSTVIAG-YAQKGLGYEALNVFRQM--QSCHSKPNEVTLVSLLSGCASV 248
I+L+ V S ++A Y+ GL +A V R M Q +P GC+ +
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP----------GCSWI 761
Query: 249 GALIHGKETHCYT 261
HG E H +
Sbjct: 762 E---HGDEVHKFV 771
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/659 (39%), Positives = 396/659 (60%), Gaps = 49/659 (7%)
Query: 61 LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
+++W S++ + AL F EM D +VL + M FG+
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFV---EMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
VHGF VR G+ D++ GN+L++MYAK M +VFE M +KD
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKD---------------- 170
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
VVS++T+IAGYAQ G+ +AL + R+M + KP+ TL S
Sbjct: 171 -------------------VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 211
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+L + +I GKE H Y I+ ++ D + + ++++DMY K I + +F
Sbjct: 212 VLPIFSEYVDVIKGKEIHGYVIRKGIDSD------VYIGSSLVDMYAKSARIEDSERVFS 265
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
+ +D ++W +++ GY Q+G N++L LF QM+ VKP A S + ACA LA
Sbjct: 266 RLYCRDG--ISWNSLVAGYVQNGRYNEALRLFRQMVTA--KVKPGAVAFSSVIPACAHLA 321
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
L G+++H YVLR + S++ ++A+ L+D YSK G+I AR +FD M + VSWT++I
Sbjct: 322 TLHLGKQLHGYVLRGGFGSNI-FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 380
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
G+ +HG G EAV +FEEM+++G+ P+ + F+ +L ACSH G+VDE YF+ M+K YG+
Sbjct: 381 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 440
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAAN 540
EHYA + DLLGRAG+L++A I M ++P VW LLS C H+N++L E A
Sbjct: 441 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 500
Query: 541 KLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFF 600
K+ ++SEN G+Y L+ N+YA+ RWK++ ++R M+ G++K+P CSW++ K T F
Sbjct: 501 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 560
Query: 601 VGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYG 660
GDR+HP +++ L ++++++ GYV +TS LHDVD+E K +LLF HSE+LA+A+G
Sbjct: 561 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 620
Query: 661 ILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
I+ + PG IR+TKN+R+C DCH AI +IS I + EII+RD+SRFHHF G+CSC +YW
Sbjct: 621 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 679
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 252/543 (46%), Gaps = 109/543 (20%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ +++ NA++ MY + +D R++F+ M + D+VS+N+++A Y QSG + AL
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRK---DVVSYNTIIAGYAQSGMYEDALR 192
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ + EM D++ D+ +L +VLP F+ GK++HG+ +R G+ DV++G+SLVD
Sbjct: 193 MVR---EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 249
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAK + ++ +VF R+ +D +SWN++V GY G + AL LF QM ++
Sbjct: 250 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK----- 304
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
P V S++ CA + L GK+ H Y +
Sbjct: 305 ------------------------------PGAVAFSSVIPACAHLATLHLGKQLHGYVL 334
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ + + + +A++DMY+KC +I AR IFD + D V+WTA+I G+A H
Sbjct: 335 RGGFGSN------IFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWTAIIMGHALH 386
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G ++++ LF +M +Q VKPN L AC+ + + E Y
Sbjct: 387 GHGHEAVSLFEEMKRQ--GVKPNQVAFVAVLTACSHVGLV---DEAWGYF---------- 431
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
N + Y + +++ V D + G G+ EEA +M E
Sbjct: 432 ---NSMTKVYGLNQELEHYAAVADLL---------------GRAGKLEEAYNFISKMCVE 473
Query: 443 GLLPDGITFLVMLYACS-HSGM-VDEGI--KYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
P G + +L +CS H + + E + K F+ S+ G Y M ++ G
Sbjct: 474 ---PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA------YVLMCNMYASNG 524
Query: 499 RLDKAMKL-----IEGMPMKPGQVVWVAL-------LSGCRKHENV-KLGEFAANKLLEL 545
R + KL +G+ KP W+ + +SG R H ++ K+ EF + ++
Sbjct: 525 RWKEMAKLRLRMRKKGLRKKPA-CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 583
Query: 546 ESE 548
E E
Sbjct: 584 EKE 586
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 7/244 (2%)
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
+I +YT K + A +F ++ K V+ W ++I + + +L F +M R
Sbjct: 45 VISIYTNLKLLHEALLLFKTL--KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC 102
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
N F L +C + LR G +H +++R D D LY N L++ Y+K +D
Sbjct: 103 PDHNVF--PSVLKSCTMMMDLRFGESVHGFIVRLGMDCD-LYTGNALMNMYAKLLGMDSV 159
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
R VF+ M K+ VS+ ++I GY G E+A+++ EM L PD T +L S
Sbjct: 160 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 219
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVA 521
V +G + + ++ G+ + +VD+ ++ R++ + ++ + + G + W +
Sbjct: 220 VDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG-ISWNS 277
Query: 522 LLSG 525
L++G
Sbjct: 278 LVAG 281
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/661 (39%), Positives = 408/661 (61%), Gaps = 18/661 (2%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
+L+ WN+M + S D SAL L+ M + + + ++ + VL + A ++ G+
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCM---ISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
Q+HG ++ G D++V SL+ MY + G + +A KVF++ +DVVS+ A++ GY+ G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
ENA LF+++ + DVVSW+ +I+GYA+ G EAL +F+ M + +P+E T+V
Sbjct: 215 YIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+++S CA G++ G++ H + D L ++NA+ID+Y+KC + A +F
Sbjct: 271 TVVSACAQSGSIELGRQVHLWID------DHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
+ + KD V++W +IGGY ++L LF +ML+ + PN T+ L ACA L
Sbjct: 325 ERLPYKD--VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHL 380
Query: 360 AALRSGREIHAYV-LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
A+ GR IH Y+ R + ++ + LID Y+K GDI+ A VF+++ HK+ SW +
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I G+ MHG+ + + +F MRK G+ PD ITF+ +L ACSHSGM+D G F M+++Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFA 538
+ P EHY CM+DLLG +G +A ++I M M+P V+W +LL C+ H NV+LGE
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 539 ANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTAT 598
A L+++E EN GSY LLSNIYA+A RW +V + R+L+ G+KK PGCS ++
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 599 FFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALA 658
F +GD+ HP++ +Y +L E+ ++ G+VP+TS L ++++E K L HSEKLA+A
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680
Query: 659 YGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNY 718
+G++++ PG + I KNLRVC +CH A IS I + EII RD +RFHHF++G CSC +Y
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740
Query: 719 W 719
W
Sbjct: 741 W 741
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 218/464 (46%), Gaps = 76/464 (16%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-------------------------- 59
+++V ++++MY + G L+ A ++FD+ ++
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 60 --DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
D+VSWN+M++ Y ++G+ K AL LF+ +M+ +++ D ++V V+ A A GS
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFK---DMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G+QVH + G ++ + N+L+D+Y+KCG + A +FER+ KDV+SWN ++ GY+H
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+ +++ AL LF++M PN+VT
Sbjct: 345 MNLYKEALLLFQEMLRSG-----------------------------------ETPNDVT 369
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
++S+L CA +GA+ G+ H Y K + + ++IDMY KC I A
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS----LRTSLIDMYAKCGDIEAAHQ 425
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+F+S+ K ++ +W AMI G+A HG A+ S +LFS+M K ++P+ T L AC+
Sbjct: 426 VFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKI--GIQPDDITFVGLLSACS 481
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID-VARVVFDNMKHKNAVSW 416
L GR I + ++ + L C+ID SG ++ + V W
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVMLYACS 459
SL+ MHG E E + K E P L +YA +
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 36/379 (9%)
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
H A+++F+ ++E N+ + W+T+ G+A AL ++ M S PN
Sbjct: 80 HFEGLPYAISVFKTIQEPNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 135
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIK--CILN-----------------------YDRC 271
T +L CA A G++ H + +K C L+ +D+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
+++ A+I Y I A+ +FD + KD VV+W AMI GYA+ G ++LEL
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD--VVSWNAMISGYAETGNYKEALEL 253
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
F M+K + V+P+ T+ + ACA+ ++ GR++H ++ + + S+ L + N LID
Sbjct: 254 FKDMMKTN--VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN-LKIVNALIDL 310
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
YSK G+++ A +F+ + +K+ +SW +LI GY +EA+ +F+EM + G P+ +T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEY-GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
L +L AC+H G +D G + K GV ++D+ + G ++ A ++ +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 511 PMKPGQVVWVALLSGCRKH 529
+ W A++ G H
Sbjct: 431 -LHKSLSSWNAMIFGFAMH 448
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
SN+ + NA++ +Y +CG L+ A +F+ + YK D++SWN+++ Y K AL L
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLL 354
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVR--SGLFEDVFVGNSLV 141
FQ+M + + V+++++LPA A +G+ G+ +H + + G+ + SL+
Sbjct: 355 FQEMLRSGETP---NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMYAKCG + A +VF + K + SWNAM+ G++ G + + LF +MR+ I+ D +
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQM 226
++ +++ + G+ ++FR M
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTM 496
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 499 bits (1286), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/694 (37%), Positives = 414/694 (59%), Gaps = 54/694 (7%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V+V +++ +Y R A+ +AR +FDEM + D+ SWN+M++ Y QSG+ K AL L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEM---PVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ M D+V++V++L A G + G +H ++++ GL ++FV N L+D+YA
Sbjct: 241 GLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ G + + KVF+RM +D ++SW++
Sbjct: 294 EFGRLRDCQKVFDRMYVRD-----------------------------------LISWNS 318
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I Y A+++F++M+ +P+ +TL+SL S + +G + + +T++
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-- 376
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+++ + NA++ MY K + ARA+F+ + D V++W +I GYAQ+G A
Sbjct: 377 ---KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD--VISWNTIISGYAQNGFA 431
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
++++E+++ +++++ + N T L AC++ ALR G ++H +L+N DV +V
Sbjct: 432 SEAIEMYN-IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV-FVV 489
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
L D Y K G ++ A +F + N+V W +LI +G HG GE+AV +F+EM EG+
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
PD ITF+ +L ACSHSG+VDEG F M +YG+ P +HY CMVD+ GRAG+L+ A+K
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
I+ M ++P +W ALLS CR H NV LG+ A+ L E+E E+ G + LLSN+YA+A +
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGK 669
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
W+ V IRS+ G++K PG S ++ F+ G++THP E MY LT L ++K+
Sbjct: 670 WEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
+GYVP+ F L DV+D+EK +L HSE+LA+A+ ++ + IRI KNLRVCGDCH+
Sbjct: 730 IGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSV 789
Query: 686 ISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+IS I + EII+RDS+RFHHFKNG CSC +YW
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLIT 421
L+S + +HA ++ ++ +V A L++ Y G++ +AR FD++++++ +W +I+
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAK-LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 422 GYGMHGQGEEAVKVFEE-MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
GYG G E ++ F M GL PD TF +L AC V +G K C++ ++G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNK-IHCLALKFGF 181
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAAN 540
+ A ++ L R + A L + MP++ W A++SG + N K +N
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD-MGSWNAMISGYCQSGNAKEALTLSN 240
Query: 541 KLLELES 547
L ++S
Sbjct: 241 GLRAMDS 247
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/712 (39%), Positives = 417/712 (58%), Gaps = 52/712 (7%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWE- 89
N +++ Y R G + AR++FDEM + DLVSWN M+ YV++ + A LF+ M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPER---DLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 90 -------MVDVDIQL----DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV-- 136
M+ Q DA S+ + +P + SW + + S + E +
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-SW--NALLSAYVQNSKMEEACMLFK 212
Query: 137 ---------GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTL 187
N L+ + K + EA + F+ M +DVVSWN ++TGY+ G + A L
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 188 FEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
F+ E+ DV +W+ +++GY Q + EA +F +M + NEV+ ++L+G
Sbjct: 273 FD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQ 324
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
+ KE +D + N +I Y +C IS A+ +FD + PK R
Sbjct: 325 GERMEMAKEL----------FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM-PK-R 372
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+ V+W AMI GY+Q G + ++L LF QM ++ + ++F S +L CA + AL G++
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF--SSALSTCADVVALELGKQ 430
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHG 427
+H +++ Y++ +V N L+ Y K G I+ A +F M K+ VSW ++I GY HG
Sbjct: 431 LHGRLVKGGYETGC-FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 428 QGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY 487
GE A++ FE M++EGL PD T + +L ACSH+G+VD+G +YF M+++YGV+P +HY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 488 ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELES 547
ACMVDLLGRAG L+ A L++ MP +P +W LL R H N +L E AA+K+ +E
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Query: 548 ENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHP 607
EN G Y LLSN+YA++ RW DV ++R M+ G+KK PG SW++ + T TF VGD HP
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 608 QSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPG 667
+ + ++A L EL R+K GYV +TS LHDV++EEK ++ HSE+LA+AYGI+ + G
Sbjct: 670 EKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG 729
Query: 668 EPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
PIR+ KNLRVC DCH AI Y++ I IILRD++RFHHFK+GSCSC +YW
Sbjct: 730 RPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 177/375 (47%), Gaps = 60/375 (16%)
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMR 192
D+ N + Y + G +EA +VF+RM + VS+N M++GY G FE A LF++M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 193 EENI---------------------------ELDVVSWSTVIAGYAQKGLGYEALNVFRQ 225
E ++ E DV SW+T+++GYAQ G +A +VF +
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
M + N+V+ +LLS + E C K N+ L+ N ++
Sbjct: 183 M----PEKNDVSWNALLSAYVQNSKM----EEACMLFKSRENW------ALVSWNCLLGG 228
Query: 286 YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+ K K I AR FDS+ +D VV+W +I GYAQ G+ +++ +LF + QD
Sbjct: 229 FVKKKKIVEARQFFDSMNVRD--VVSWNTIITGYAQSGKIDEARQLFDESPVQD------ 280
Query: 346 AFTISCSLMACARLAALRSGREIHAYVL-RNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
FT + + + + RE+ + RN+ N ++ Y + +++A+ +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS------WNAMLAGYVQGERMEMAKEL 334
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
FD M +N +W ++ITGY G+ EA +F++M K D +++ M+ S SG
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHS 390
Query: 465 DEGIKYFSCMSKEYG 479
E ++ F M +E G
Sbjct: 391 FEALRLFVQMEREGG 405
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 145/303 (47%), Gaps = 57/303 (18%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV N ++T Y +CG + A+ +FD+M K D VSW +M+A Y QSG + AL LF
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR---DPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M +L+ S + L A + + GKQ+HG V+ G FVGN+L+ MY
Sbjct: 399 QMEREGG---RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + EA+ +F+ M KD+VSWN M+ GYS G E AL FE M+ E +
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGL--------- 506
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
KP++ T+V++LS C+ G + G++ + YT+
Sbjct: 507 --------------------------KPDDATMVAVLSACSHTGLVDKGRQ-YFYTMT-- 537
Query: 266 LNYDRCDQDELLVINA-----IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
QD ++ N+ ++D+ + + A + ++ P + + W ++G
Sbjct: 538 -------QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM-PFEPDAAIWGTLLGASR 589
Query: 321 QHG 323
HG
Sbjct: 590 VHG 592
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/691 (36%), Positives = 410/691 (59%), Gaps = 51/691 (7%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
F+ ++ G + ARQ+FD++ + +IF WN+++ Y ++ + AL ++ M
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIF---PWNAIIRGYSRNNHFQDALLMYSNM 110
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
+ D+ + ++L A + + G+ VH R G DVFV N L+ +YAKC
Sbjct: 111 QL---ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC 167
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
+ A VFE L L E+ +VSW+ ++
Sbjct: 168 RRLGSARTVFE-------------------------GLPLPERT--------IVSWTAIV 194
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
+ YAQ G EAL +F QM+ KP+ V LVS+L+ + L G+ H +K L
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
+ D L+ +N MY KC ++ A+ +FD + K N++ W AMI GYA++G A +
Sbjct: 255 ---IEPDLLISLNT---MYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGYARE 306
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
++++F +M+ +D V+P+ +I+ ++ ACA++ +L R ++ YV R+ Y DV ++++
Sbjct: 307 AIDMFHEMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSA 363
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
LID ++K G ++ AR+VFD ++ V W+++I GYG+HG+ EA+ ++ M + G+ P+
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+TFL +L AC+HSGMV EG +F+ M+ ++ + P ++HYAC++DLLGRAG LD+A ++I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
+ MP++PG VW ALLS C+KH +V+LGE+AA +L ++ N G Y LSN+YA AR W
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLG 627
V +R MK G+ K GCSWV+ + F VGD++HP+ E + + + R+K G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Query: 628 YVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAIS 687
+V +LHD++DEE + L HSE++A+AYG++++ G P+RITKNLR C +CH A
Sbjct: 603 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 662
Query: 688 YISMIIQHEIILRDSSRFHHFKNGSCSCRNY 718
IS ++ EI++RD++RFHHFK+G CSC +Y
Sbjct: 663 LISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 53/410 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+++VFV N ++ +Y +C L AR +F+ + E +VSW ++V+AY Q+G+ AL
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE-RTIVSWTAIVSAYAQNGEPMEALE 208
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F +M +M D++ D V+LV+VL AF + G+ +H V+ GL + + SL
Sbjct: 209 IFSQMRKM---DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG + A +F++M+ +++ WNAM++GY+ G A+ +F +M +++ D +S
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ S +S CA VG+L + + Y
Sbjct: 326 -----------------------------------ITSAISACAQVGSLEQARSMYEYV- 349
Query: 263 KCILNYDRCD-QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
R D +D++ + +A+IDM+ KC S+ AR +FD DR+VV W+AMI GY
Sbjct: 350 ------GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL--DRDVVVWSAMIVGYGL 401
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
HG A +++ L+ M + V PN T LMAC +R G + ++ +
Sbjct: 402 HGRAREAISLYRAM--ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQ 459
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGE 430
+ A C+ID ++G +D A V M + V+ W +L++ H E
Sbjct: 460 QHYA-CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 201/420 (47%), Gaps = 64/420 (15%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
KQ+H + GL F+ L+ + G + A +VF+ + + + WNA++ GYS
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
F++AL ++ N++L VS P+ T
Sbjct: 98 NHFQDALLMY-----SNMQLARVS------------------------------PDSFTF 122
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
LL C+ + L G+ H + L +D ++ V N +I +Y KC+ + AR +
Sbjct: 123 PHLLKACSGLSHLQMGRFVHAQVFR--LGFDA----DVFVQNGLIALYAKCRRLGSARTV 176
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F+ + +R +V+WTA++ YAQ+GE ++LE+FSQM K D VKP+ + L A
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD--VKPDWVALVSVLNAFTC 234
Query: 359 LAALRSGREIHAYVLRN--QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
L L+ GR IHA V++ + + D+L N + Y+K G + A+++FD MK N + W
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSPNLILW 291
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
++I+GY +G EA+ +F EM + + PD I+ + AC+ G +++ +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY----- 346
Query: 477 EYGVIPGEEHY-------ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
EY G Y + ++D+ + G ++ A +L+ + VVW A++ G H
Sbjct: 347 EY---VGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLH 402
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/709 (37%), Positives = 410/709 (57%), Gaps = 78/709 (11%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
+L++AR++FDE+ K F +WN+++ AY D ++ F M + + +
Sbjct: 78 ASLEYARKVFDEIPKPNSF---AWNTLIRAYASGPDPVLSIWAFLDM--VSESQCYPNKY 132
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+ ++ A A + S G+ +HG AV+S + DVFV NSL+ Y CG + A KVF +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
++K DVVSW+++I G+ QKG +AL
Sbjct: 193 KEK-----------------------------------DVVSWNSMINGFVQKGSPDKAL 217
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
+F++M+S K + VT+V +LS CA + L G++ Y + +N + L + N
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN------LTLAN 271
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKD-----------------------------RNVVT 311
A++DMYTKC SI A+ +FD++ KD +++V
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 312 WTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAY 371
W A+I Y Q+G+ N++L +F + L+ +++K N T+ +L ACA++ AL GR IH+Y
Sbjct: 332 WNALISAYEQNGKPNEALIVFHE-LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 372 VLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEE 431
+ ++ + +V + LI YSK GD++ +R VF++++ ++ W+++I G MHG G E
Sbjct: 391 IKKHGIRMN-FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 432 AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
AV +F +M++ + P+G+TF + ACSH+G+VDE F M YG++P E+HYAC+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 492 DLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDG 551
D+LGR+G L+KA+K IE MP+ P VW ALL C+ H N+ L E A +LLELE NDG
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 552 SYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSER 611
++ LLSNIYA +W++V+ +R M+ TG+KK PGCS ++ F GD HP SE+
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 612 MYAILTELIQRIKVLGYVPETSFALHDVDDEE-KGDLLFDHSEKLALAYGILTSAPGEPI 670
+Y L E+++++K GY PE S L +++EE K L HSEKLA+ YG++++ + I
Sbjct: 630 VYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVI 689
Query: 671 RITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
R+ KNLRVCGDCH+ IS + EII+RD RFHHF+NG CSC ++W
Sbjct: 690 RVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 229/413 (55%), Gaps = 32/413 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ S+VFV N+++ Y CG LD A ++F + + D+VSWNSM+ +VQ G AL
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK---DVVSWNSMINGFVQKGSPDKALE 218
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+K M D++ V++V VL A A + + FG+QV + + + ++ + N+++D
Sbjct: 219 LFKK---MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + +A ++F+ M++KD V+W M+ GY+ +E A + M ++ D+V+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIVA 331
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQ-SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
W+ +I+ Y Q G EAL VF ++Q + K N++TLVS LS CA VGAL G+ H Y
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K + + V +A+I MY+KC + +R +F+SV + R+V W+AMIGG A
Sbjct: 392 KKHGIRMN------FHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAM 443
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
HG N+++++F +M Q+ +VKPN T + AC+ +G A L +Q +S+
Sbjct: 444 HGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACS-----HTGLVDEAESLFHQMESNY 496
Query: 382 LYVAN-----CLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQ 428
V C++D +SG ++ A + M + S W +L+ +H
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 493 bits (1269), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/699 (36%), Positives = 408/699 (58%), Gaps = 57/699 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + V N+++ +Y +CG + AR +FD K+E+ +V+WNSM++ Y +G ALG
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFD---KTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F + M ++L S +V+ A++ F +Q+H V+ G D + +L+
Sbjct: 282 MF---YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
Y+KC M +A ++F+ IG N VVS
Sbjct: 339 AYSKCTAMLDALRLFK------------------EIGCVGN----------------VVS 364
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ +I+G+ Q EA+++F +M+ +PNE T +L+ +I E H +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVV 420
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K NY+R V A++D Y K + A +F + D+++V W+AM+ GYAQ
Sbjct: 421 KT--NYERSST----VGTALLDAYVKLGKVEEAAKVFSGI--DDKDIVAWSAMLAGYAQT 472
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL-AALRSGREIHAYVLRNQYDSDV 381
GE ++++F ++ K +KPN FT S L CA A++ G++ H + ++++ DS
Sbjct: 473 GETEAAIKMFGELTKG--GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS- 529
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
L V++ L+ Y+K G+I+ A VF + K+ VSW S+I+GY HGQ +A+ VF+EM+K
Sbjct: 530 LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
+ DG+TF+ + AC+H+G+V+EG KYF M ++ + P +EH +CMVDL RAG+L+
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
KAMK+IE MP G +W +L+ CR H+ +LG AA K++ ++ E+ +Y LLSN+YA
Sbjct: 650 KAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
+ W++ ++R LM +KK PG SW++ K T +F GDR+HP +++Y L +L
Sbjct: 710 ESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLST 769
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
R+K LGY P+TS+ L D+DDE K +L HSE+LA+A+G++ + G P+ I KNLRVCGD
Sbjct: 770 RLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGD 829
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHF-KNGSCSCRNYW 719
CH I I+ I + EI++RDS+RFHHF +G CSC ++W
Sbjct: 830 CHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 249/515 (48%), Gaps = 57/515 (11%)
Query: 15 CCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQS 74
C C+ L+ +V V ++V Y + R++FDEM + + V+W ++++ Y ++
Sbjct: 117 CQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV---VTWTTLISGYARN 172
Query: 75 GDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDV 134
L LF +M + Q ++ + L A G G QVH V++GL + +
Sbjct: 173 SMNDEVLTLFMRMQ---NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 135 FVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE 194
V NSL+++Y KCG + +A +F++ + K VV+WN+M++GY+ G+ AL +F MR
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 195 NIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
+ L +E + S++ CA++ L
Sbjct: 290 YVRL-----------------------------------SESSFASVIKLCANLKELRFT 314
Query: 255 KETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTA 314
++ HC +K +D+ + L+V Y+KC ++ A +F + NVV+WTA
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMV------AYSKCTAMLDALRLFKEIGCVG-NVVSWTA 367
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
MI G+ Q+ ++++LFS+M + + V+PN FT S L A + S E+HA V++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEM--KRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVK 421
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVK 434
Y+ V L+D Y K G ++ A VF + K+ V+W++++ GY G+ E A+K
Sbjct: 422 TNYERSST-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLL 494
+F E+ K G+ P+ TF +L C+ + K F + + + + ++ +
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 495 GRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ G ++ A ++ + K V W +++SG +H
Sbjct: 541 AKKGNIESAEEVFKRQREKD-LVSWNSMISGYAQH 574
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 171/343 (49%), Gaps = 16/343 (4%)
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
NA LF++ + E S+ +++ G+++ G EA +F + + + S+L
Sbjct: 45 NAHNLFDKSPGRDRE----SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 243 SGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV 302
A++ + G++ HC IK D++ V +++D Y K + R +FD +
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGF------LDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 303 APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
K+RNVVTWT +I GYA++ ++ L LF +M Q+ +PN+FT + +L A
Sbjct: 155 --KERNVVTWTTLISGYARNSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
G ++H V++N D + V+N LI+ Y K G++ AR++FD + K+ V+W S+I+G
Sbjct: 211 GRGLQVHTVVVKNGLDK-TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
Y +G EA+ +F MR + +F ++ C++ + + C +YG +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL-RFTEQLHCSVVKYGFLF 328
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ ++ + + A++L + + V W A++SG
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/668 (39%), Positives = 391/668 (58%), Gaps = 56/668 (8%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D+ SWNS++A +SGD+ AL F M ++ + S + A +S+ + GK
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKL---SLYPTRSSFPCAIKACSSLFDIFSGK 96
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
Q H A G D+FV ++L+ MY+ C G
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTC-------------------------------G 125
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE---- 235
E+A +F+++ + NI VSW+++I GY G +A+++F+ + + ++
Sbjct: 126 KLEDARKVFDEIPKRNI----VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
Query: 236 --VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKS-- 291
+ LVS++S C+ V A + H + IK +DR + V N ++D Y K
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIK--RGFDR----GVSVGNTLLDAYAKGGEGG 235
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
++VAR IFD + KDR V++ +++ YAQ G +N++ E+F +++K ++ V NA T+S
Sbjct: 236 VAVARKIFDQIVDKDR--VSYNSIMSVYAQSGMSNEAFEVFRRLVK-NKVVTFNAITLST 292
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK 411
L+A + ALR G+ IH V+R + DV+ V +ID Y K G ++ AR FD MK+K
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVI-VGTSIIDMYCKCGRVETARKAFDRMKNK 351
Query: 412 NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYF 471
N SWT++I GYGMHG +A+++F M G+ P+ ITF+ +L ACSH+G+ EG ++F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 472 SCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
+ M +GV PG EHY CMVDLLGRAG L KA LI+ M MKP ++W +LL+ CR H+N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Query: 532 VKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
V+L E + +L EL+S N G Y LLS+IYA+A RWKDV R+R +MK+ G+ K PG S ++
Sbjct: 472 VELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
Query: 592 GKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDH 651
F +GD HPQ E++Y L EL +++ GYV TS HDVD+EEK L H
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVH 591
Query: 652 SEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNG 711
SEKLA+A+GI+ + PG + + KNLRVC DCH I IS I+ E ++RD+ RFHHFK+G
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651
Query: 712 SCSCRNYW 719
CSC +YW
Sbjct: 652 GCSCGDYW 659
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 212/416 (50%), Gaps = 55/416 (13%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
S++FV +A++ MY CG L+ AR++FDE+ K I VSW SM+ Y +G+ A+ L
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI---VSWTSMIRGYDLNGNALDAVSL 164
Query: 84 FQKMW--EMVDVDIQ-LDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
F+ + E D D LD++ LV+V+ A + + + + +H F ++ G V VGN+L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 141 VDMYAKCGM--MHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
+D YAK G + A K+F+++ KD VS+N++++ Y+ GM A +F ++ ++
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL----VKN 280
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
VV++ N +TL ++L + GAL GK H
Sbjct: 281 KVVTF------------------------------NAITLSTVLLAVSHSGALRIGKCIH 310
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
I+ L +D+++V +IIDMY KC + AR FD + K++NV +WTAMI G
Sbjct: 311 DQVIRMGL------EDDVIVGTSIIDMYCKCGRVETARKAFDRM--KNKNVRSWTAMIAG 362
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-REIHAYVLRNQY 377
Y HG A +LELF M+ D V+PN T L AC+ G R +A R
Sbjct: 363 YGMHGHAAKALELFPAMI--DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEA 432
+ + + C++D ++G + A + MK K +++ W+SL+ +H E A
Sbjct: 421 EPGLEHYG-CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 185/362 (51%), Gaps = 35/362 (9%)
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
+N TLF + ++ DV SW++VIA A+ G EAL F M+ P +
Sbjct: 26 QNLTTLFNRYVDKT---DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCA 82
Query: 242 LSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS 301
+ C+S+ + GK+TH + Y Q ++ V +A+I MY+ C + AR +FD
Sbjct: 83 IKACSSLFDIFSGKQTHQQAF--VFGY----QSDIFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 302 VAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM----ACA 357
+ PK RN+V+WT+MI GY +G A D++ LF +L + F S L+ AC+
Sbjct: 137 I-PK-RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD--IDVARVVFDNMKHKNAVS 415
R+ A IH++V++ +D V V N L+D Y+K G+ + VAR +FD + K+ VS
Sbjct: 195 RVPAKGLTESIHSFVIKRGFDRGV-SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLP-DGITFLVMLYACSHSGMV-------DEG 467
+ S+++ Y G EA +VF + K ++ + IT +L A SHSG + D+
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
I+ M E VI G ++D+ + GR++ A K + M K + W A+++G
Sbjct: 314 IR----MGLEDDVIVG----TSIIDMYCKCGRVETARKAFDRMKNKNVR-SWTAMIAGYG 364
Query: 528 KH 529
H
Sbjct: 365 MH 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L +V V +++ MY +CG ++ AR+ FD M + SW +M+A Y G AL
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV---RSWTAMIAGYGMHGHAAKALE 374
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMG----SW-WFGKQVHGFAVRSGLFEDVFVG 137
LF M+D ++ + ++ V+VL A + G W WF F V GL
Sbjct: 375 LFP---AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH----Y 427
Query: 138 NSLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG 174
+VD+ + G + +A + +RM+ K D + W++++
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/692 (37%), Positives = 392/692 (56%), Gaps = 54/692 (7%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V N+++ MY + AR +FD M + DL+SWNS++A Q+G A+ LF
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSER---DLISWNSVIAGIAQNGLEVEAVCLFM--- 405
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWW-FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
+++ ++ D ++ +VL A +S+ KQVH A++ D FV +L+D Y++
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
M EA +FER D+V+W+ ++
Sbjct: 466 RCMKEAEILFERHN------------------------------------FDLVAWNAMM 489
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
AGY Q G++ L +F M + ++ TL ++ C + A+ GK+ H Y IK +
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
D L V + I+DMY KC +S A+ FDS+ D V WT MI G ++GE
Sbjct: 550 LD------LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD--VAWTTMISGCIENGEEER 601
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+ +FSQM + V P+ FTI+ A + L AL GR+IHA L+ +D +V
Sbjct: 602 AFHVFSQM--RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP-FVGTS 658
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+D Y+K G ID A +F ++ N +W +++ G HG+G+E +++F++M+ G+ PD
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+TF+ +L ACSHSG+V E K+ M +YG+ P EHY+C+ D LGRAG + +A LI
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
E M M+ ++ LL+ CR + + G+ A KLLELE + +Y LLSN+YA A +W
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWD 838
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLG 627
++ R++MK +KK PG SW++ K F V DR++ Q+E +Y + ++I+ IK G
Sbjct: 839 EMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Query: 628 YVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAIS 687
YVPET F L DV++EEK L+ HSEKLA+A+G+L++ P PIR+ KNLRVCGDCH A+
Sbjct: 899 YVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMK 958
Query: 688 YISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
YI+ + EI+LRD++RFH FK+G CSC +YW
Sbjct: 959 YIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 269/548 (49%), Gaps = 70/548 (12%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD-----TK 78
N F+ N +++MY +CG+L +AR++FD+M DLVSWNS++AAY QS + +
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDR---DLVSWNSILAAYAQSSECVVENIQ 127
Query: 79 SALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGN 138
A LF+ + + V + ++L +L G W + HG+A + GL D FV
Sbjct: 128 QAFLLFRILRQDV---VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 139 SLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
+LV++Y K G + E +FE M +DVV WN M+ Y +G E A+ L +
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 199 DVVSWSTV--IAG------------------------YAQKGLG-------YEAL-NVFR 224
+ ++ + I+G + KGL Y AL F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID 284
M + ++VT + +L+ V +L G++ HC +K L+ L V N++I+
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL------MLTVSNSLIN 358
Query: 285 MYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
MY K + AR +FD+++ +R++++W ++I G AQ+G +++ LF Q+L+ +KP
Sbjct: 359 MYCKLRKFGFARTVFDNMS--ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC--GLKP 414
Query: 345 NAFTISCSLMACARLA-ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARV 403
+ +T++ L A + L L +++H + ++ SD +V+ LID YS++ + A +
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS-FVSTALIDAYSRNRCMKEAEI 473
Query: 404 VFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+F+ +H + V+W +++ GY G + +K+F M K+G D T + C
Sbjct: 474 LFE--RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 463 MVDEGIKYFSCMSKEYGVIPGEEH----YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVV 518
+++G + + Y + G + + ++D+ + G + A + +P+ P V
Sbjct: 532 AINQGKQVHA-----YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVA 585
Query: 519 WVALLSGC 526
W ++SGC
Sbjct: 586 WTTMISGC 593
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 200/442 (45%), Gaps = 64/442 (14%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+ FV A++ Y R + A +F+ FDLV+WN+M+A Y QS D L LF
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFER----HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
M + + + D +L V + + GKQVH +A++SG D++V + ++DMY
Sbjct: 506 ALMHKQGE---RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
KCG M A F+ + D V+W M++G G E A +F QMR +
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV-------- 614
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
P+E T+ +L + + AL G++ H +K
Sbjct: 615 ---------------------------LPDEFTIATLAKASSCLTALEQGRQIHANALK- 646
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
LN C D V +++DMY KC SI A +F + + N+ W AM+ G AQHGE
Sbjct: 647 -LN---CTNDP-FVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWNAMLVGLAQHGE 699
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA----ALRSGREIHA-YVLRNQYDS 379
++L+LF QM + +KP+ T L AC+ A + R +H Y ++ + +
Sbjct: 700 GKETLQLFKQM--KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEE 438
+CL D ++G + A + ++M + + S + +L+ + G E +V +
Sbjct: 758 -----YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812
Query: 439 MRK-EGLLPDGITFLVMLYACS 459
+ + E L L +YA +
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAA 834
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
L+ GK TH IL ++ + E +IN +I MY+KC S++ AR +FD + DR++V
Sbjct: 55 LMLGKCTHAR----ILTFE--ENPERFLINNLISMYSKCGSLTYARRVFDKMP--DRDLV 106
Query: 311 TWTAMIGGYAQHGEA-----NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG 365
+W +++ YAQ E + LF ++L+QD V + T+S L C + +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLF-RILRQD-VVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
H Y + D D +VA L++ Y K G + +V+F+ M +++ V W ++ Y
Sbjct: 165 ESFHGYACKIGLDGDE-FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
G EEA+ + GL P+ IT ++
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/693 (38%), Positives = 401/693 (57%), Gaps = 44/693 (6%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N++V+ Y G ARQ+FDEM + ++VSWN +V+ Y+++ A +F+ M E
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSER---NVVSWNGLVSGYIKNRMIVEARNVFELMPER 108
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF---AVRSGLFEDVFVGNSLVDMYAKC 147
+ VS ++ + G G+ F R+ + V G + D
Sbjct: 109 -------NVVSWTAMVKGYMQEG--MVGEAESLFWRMPERNEVSWTVMFGGLIDD----- 154
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G + +A K+++ M KDVV+ M+ G G + A +F++MRE N VV+W+T+I
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN----VVTWTTMI 210
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
GY Q ++V R++ + EV+ S+L G G + +E
Sbjct: 211 TGYRQNN----RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF---------- 256
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
++ ++ NA+I + + IS AR +FD + +DR+ TW MI Y + G +
Sbjct: 257 FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLM--EDRDNATWRGMIKAYERKGFELE 314
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+L+LF+QM KQ V+P+ ++ L CA LA+L+ GR++HA+++R Q+D DV YVA+
Sbjct: 315 ALDLFAQMQKQ--GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV-YVASV 371
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+ Y K G++ A++VFD K+ + W S+I+GY HG GEEA+K+F EM G +P+
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+T + +L ACS++G ++EG++ F M ++ V P EHY+C VD+LGRAG++DKAM+LI
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
E M +KP VW ALL C+ H + L E AA KL E E +N G+Y LLS+I A+ +W
Sbjct: 492 ESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWG 551
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGD-RTHPQSERMYAILTELIQRIKVL 626
DV +R M+ + K PGCSW++ K F G + HP+ + +L + ++
Sbjct: 552 DVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREA 611
Query: 627 GYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAI 686
GY P+ S LHDVD+EEK D L HSE+LA+AYG+L G PIR+ KNLRVCGDCH AI
Sbjct: 612 GYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAI 671
Query: 687 SYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
IS + + EIILRD++RFHHF NG CSCR+YW
Sbjct: 672 KLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 31/329 (9%)
Query: 131 FEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQ 190
F+ + NS+V Y G+ EA ++F+ M +++VVSWN +V+GY M A +FE
Sbjct: 45 FKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 191 MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
M E N VVSW+ ++ GY Q+G+ EA ++F +M + NEV+ + G G
Sbjct: 105 MPERN----VVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGR 156
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
+ ++ YD +++ +I + + AR IFD + ++RNVV
Sbjct: 157 IDKARKL----------YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM--RERNVV 204
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
TWT MI GY Q+ + + +LF M P +S + M L SGR A
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVM--------PEKTEVSWTSML---LGYTLSGRIEDA 253
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
+ N +I + + G+I AR VFD M+ ++ +W +I Y G
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACS 459
EA+ +F +M+K+G+ P + + +L C+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 183/437 (41%), Gaps = 105/437 (24%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V CNA++ +G G + AR++FD M E D +W M+ AY + G AL LF +
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLM---EDRDNATWRGMIKAYERKGFELEALDLFAQ 321
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M + ++ SL+++L A++ S +G+QVH VR +DV+V + L+ MY K
Sbjct: 322 MQKQ---GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
CG + +A VF+R KD++ WN++++GY+ G+ E AL
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL--------------------- 417
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
+F +M S + PN+VTL+++L+ C+ G L G E
Sbjct: 418 --------------KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE---------- 453
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK---DRNVVTWTAMIGGYAQHG 323
IF+S+ K V ++ + + G
Sbjct: 454 -------------------------------IFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+ + ++EL M ++KP+A L AC + L + N+ D+ Y
Sbjct: 483 QVDKAMELIESM-----TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 384 VANCLID-TYSKSGDIDVARVVFDNMKHKN-----AVSWTS------LITGYGMHGQGEE 431
V I+ + SK GD+ V R NM+ N SW + T G+ E+
Sbjct: 538 VLLSSINASRSKWGDVAVVR---KNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQ 594
Query: 432 AVKVFEEMRKEGLLPDG 448
A+ + + +GLL +
Sbjct: 595 AMILMMLEKTDGLLREA 611
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 38/257 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ +V+V + ++TMY +CG L A+ +FD D++ WNS+++ Y G + AL
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK---DIIMWNSIISGYASHGLGEEALK 418
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL-- 140
+F EM + V+L+ +L A + + GK G + + V ++
Sbjct: 419 IFH---EMPSSGTMPNKVTLIAILTACS-----YAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 141 ----VDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG---YSHIGMFE-NALTLFEQM 191
VDM + G + +A ++ E M K D W A++ +S + + E A LFE
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN- 529
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
E + V S++ A ++ G + V + M++ + VS GC+ +
Sbjct: 530 -EPDNAGTYVLLSSINASRSKWG---DVAVVRKNMRTNN--------VSKFPGCSWIEV- 576
Query: 252 IHGKETHCYTIKCILNY 268
GK+ H +T I N+
Sbjct: 577 --GKKVHMFTRGGIKNH 591
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 372 VLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEE 431
+LR Y + + I S+ G I+ AR FD+++ K SW S+++GY +G +E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 432 AVKVFEEMRKEG-------------------------LLPDG--ITFLVMLYACSHSGMV 464
A ++F+EM + L+P+ +++ M+ GMV
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK 513
E F M + E + M L GR+DKA KL + MP+K
Sbjct: 127 GEAESLFWRMPER-----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK 170
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/698 (36%), Positives = 391/698 (56%), Gaps = 53/698 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S V VCN ++ MY G A +F +M DL+SWNS++A++V G + ALG
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK---DLISWNSLMASFVNDGRSLDALG 348
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L + M+ ++ V+ + L A + + G+ +HG V SGLF + +GN+LV
Sbjct: 349 L---LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY K G M E+ +V +M ++ DVV+
Sbjct: 406 MYGKIGEMSESRRVLLQMPRR-----------------------------------DVVA 430
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIH-GKETHCYT 261
W+ +I GYA+ +AL F+ M+ N +T+VS+LS C G L+ GK H Y
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ D V N++I MY KC +S ++ +F+ + +RN++TW AM+ A
Sbjct: 491 VSAGFESDEH------VKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAH 542
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
HG + L+L S+M + V + F+ S L A A+LA L G+++H ++ ++ D
Sbjct: 543 HGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
++ N D YSK G+I + +++ SW LI+ G HG EE F EM +
Sbjct: 601 -FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ P +TF+ +L ACSH G+VD+G+ Y+ +++++G+ P EH C++DLLGR+GRL
Sbjct: 660 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 719
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A I MPMKP +VW +LL+ C+ H N+ G AA L +LE E+D Y L SN++A
Sbjct: 720 EAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFA 779
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
RW+DV +R M IKK+ CSWV+ K ++F +GDRTHPQ+ +YA L ++ +
Sbjct: 780 TTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKK 839
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
IK GYV +TS AL D D+E+K L++HSE+LALAY ++++ G +RI KNLR+C D
Sbjct: 840 LIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSD 899
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CH+ ++S +I I+LRD RFHHF+ G CSC++YW
Sbjct: 900 CHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 248/527 (47%), Gaps = 56/527 (10%)
Query: 36 MYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDI 95
MY + G + AR +FD M + + VSWN+M++ V+ G + F+KM D+ I
Sbjct: 1 MYTKFGRVKPARHLFDIM---PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM---CDLGI 54
Query: 96 QLDAVSLVNVLPAFASMGSWWF-GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEAS 154
+ + + +++ A GS + G QVHGF +SGL DV+V +++ +Y G++ +
Sbjct: 55 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 114
Query: 155 KVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKG 214
KVFE M ++ VVSW++++ GY+ KG
Sbjct: 115 KVFEEMPDRN-----------------------------------VVSWTSLMVGYSDKG 139
Query: 215 LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
E +++++ M+ NE ++ ++S C + G++ +K L +
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL------ES 193
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQ 334
+L V N++I M ++ A IFD ++ +R+ ++W ++ YAQ+G +S +FS
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMS--ERDTISWNSIAAAYAQNGHIEESFRIFSL 251
Query: 335 MLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSK 394
M + V N+ T+S L + + GR IH V++ +DS V+ V N L+ Y+
Sbjct: 252 MRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVCNTLLRMYAG 308
Query: 395 SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
+G A +VF M K+ +SW SL+ + G+ +A+ + M G + +TF
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKP 514
L AC ++G + + G+ + +V + G+ G + ++ +++ MP +
Sbjct: 369 LAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRD 427
Query: 515 GQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
V W AL+ G + E+ AA + + +E + T++S + A
Sbjct: 428 -VVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 472
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 223/510 (43%), Gaps = 59/510 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S+V+V A++ +YG G + +R++F+EM + VSW S++ Y G+ + +
Sbjct: 90 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV---VSWTSLMVGYSDKGEPEEVID 146
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+++ M V +++SLV + + + G+Q+ G V+SGL + V NSL+
Sbjct: 147 IYKGM-RGEGVGCNENSMSLV--ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
M G + A+ +F++M E D +S
Sbjct: 204 MLGSMGNVDYANYIFDQMS-----------------------------------ERDTIS 228
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+++ A YAQ G E+ +F M+ H + N T+ +LLS V G+ H +
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + C V N ++ MY A +F + KD +++W +++ +
Sbjct: 289 KMGFDSVVC------VCNTLLRMYAGAGRSVEANLVFKQMPTKD--LISWNSLMASFVND 340
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G + D+L L M+ +SV N T + +L AC GR +H V+ S +
Sbjct: 341 GRSLDALGLLCSMISSGKSV--NYVTFTSALAACFTPDFFEKGRILHGLVVV----SGLF 394
Query: 383 Y---VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
Y + N L+ Y K G++ +R V M ++ V+W +LI GY ++A+ F+ M
Sbjct: 395 YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
R EG+ + IT + +L AC G + E K G E ++ + + G
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
L + L G+ + + W A+L+ H
Sbjct: 515 LSSSQDLFNGLDNR-NIITWNAMLAANAHH 543
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/603 (39%), Positives = 372/603 (61%), Gaps = 16/603 (2%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GK+VH SG + + N L+ MYAKCG + +A KVF+ M +D+ SWN MV GY+
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSC-HSKPNEV 236
+G+ E A LF++M E+ D SW+ ++ GY +K EAL ++ MQ +S+PN
Sbjct: 164 VGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
T+ ++ A+V + GKE H + ++ L D DE+L ++++DMY KC I AR
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGL-----DSDEVL-WSSLMDMYGKCGCIDEAR 273
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
IFD + KD VV+WT+MI Y + + LFS+++ +PN +T + L AC
Sbjct: 274 NIFDKIVEKD--VVSWTSMIDRYFKSSRWREGFSLFSELVGS--CERPNEYTFAGVLNAC 329
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
A L G+++H Y+ R +D + ++ L+D Y+K G+I+ A+ V D + VSW
Sbjct: 330 ADLTTEELGKQVHGYMTRVGFDP-YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSW 388
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
TSLI G +GQ +EA+K F+ + K G PD +TF+ +L AC+H+G+V++G+++F +++
Sbjct: 389 TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITE 448
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGE 536
++ + +HY C+VDLL R+GR ++ +I MPMKP + +W ++L GC + N+ L E
Sbjct: 449 KHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAE 508
Query: 537 FAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGT 596
AA +L ++E EN +Y ++NIYA A +W++ ++R M+ G+ KRPG SW + K+
Sbjct: 509 EAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKR 568
Query: 597 ATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLA 656
F D +HP ++ L EL +++K GYVP TS LHDV+DE+K + L HSEKLA
Sbjct: 569 HVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLA 628
Query: 657 LAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCR 716
+A+ IL++ G I++ KNLR C DCH AI +IS I + +I +RDS+RFH F+NG CSC
Sbjct: 629 VAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCG 688
Query: 717 NYW 719
+YW
Sbjct: 689 DYW 691
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 221/490 (45%), Gaps = 84/490 (17%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
+ + N ++ MY +CG+L AR++FDEM DL SWN MV Y + G + A LF +
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNR---DLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 87 MWE------------MVDVDIQLDAVSLVNVLPAFASMGSWWF----------------- 117
M E V D +A+ L +++ + F
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GK++HG VR+GL D + +SL+DMY KCG + EA +F+++ +KDVVSW +M+ Y
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+ +LF ++ + SC +PNE T
Sbjct: 297 SSRWREGFSLFSEL----------------------------------VGSCE-RPNEYT 321
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+L+ CA + GK+ H Y + + +D ++++DMYTKC +I A+
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTR--VGFDPYS----FASSSLVDMYTKCGNIESAKH 375
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+ D D +V+WT++IGG AQ+G+ +++L+ F +LK KP+ T L AC
Sbjct: 376 VVDGCPKPD--LVSWTSLIGGCAQNGQPDEALKYFDLLLKS--GTKPDHVTFVNVLSACT 431
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSW 416
+ G E + S CL+D ++SG + + V M K + W
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLW 491
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG-ITFLVMLYACSHSGMVDEGIKYFSCMS 475
S++ G +G + A + +E+ K + P+ +T++ M + +G +E K M
Sbjct: 492 ASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM- 548
Query: 476 KEYGVI--PG 483
+E GV PG
Sbjct: 549 QEIGVTKRPG 558
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 43/342 (12%)
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDE 275
G + L Q+ KP T +L+ C+ AL GK+ H +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF------VPG 119
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQM 335
+++ N ++ MY KC S+ AR +FD + +R++ +W M+ GYA+ G ++ +LF +M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMP--NRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Query: 336 LKQDR------------------------------SVKPNAFTISCSLMACARLAALRSG 365
++D + +PN FT+S ++ A A + +R G
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 366 REIHAYVLRNQYDSD-VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYG 424
+EIH +++R DSD VL+ + L+D Y K G ID AR +FD + K+ VSWTS+I Y
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSS--LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 425 MHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE 484
+ E +F E+ P+ TF +L AC+ + G + M++ G P
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYS 354
Query: 485 EHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
+ +VD+ + G ++ A +++G P KP V W +L+ GC
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 10/225 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S+ + ++++ MYG+CG +D AR +FD++ + D+VSW SM+ Y +S +
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK---DVVSWTSMIDRYFKSSRWREGFS 305
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF E+V + + + VL A A + + GKQVHG+ R G F +SLVD
Sbjct: 306 LFS---ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + A V + K D+VSW +++ G + G + AL F+ + + + D V+
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 203 WSTVIAGYAQKGLGYEALNVF----RQMQSCHSKPNEVTLVSLLS 243
+ V++ GL + L F + + H+ + LV LL+
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLA 467
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
R+ KP A T + C++ AL G+++H ++ + + ++ + N L+ Y+K G +
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV-IWNRLLRMYAKCGSLV 137
Query: 400 VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS 459
AR VFD M +++ SW ++ GY G EEA K+F+EM ++ D ++ M+
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYV 193
Query: 460 HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM---KLIEGMPMKPG- 515
+E + +S M + +P V + A K + K I G ++ G
Sbjct: 194 KKDQPEEALVLYSLMQR----VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 516 ---QVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKD 568
+V+W +L+ K + +K++E ++ S+T + + Y + RW++
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE---KDVVSWTSMIDRYFKSSRWRE 302
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/698 (35%), Positives = 397/698 (56%), Gaps = 58/698 (8%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+S + + + +V MY + ++ AR++FD M + D + WN+M++ Y ++ ++ +
Sbjct: 151 DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK---DTILWNTMISGYRKNEMYVESIQV 207
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+ + + + +LD +L+++LPA A + G Q+H A ++G + +V + +
Sbjct: 208 FRDL--INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+KCG + S +F +K D +V++
Sbjct: 266 YSKCGKIKMGSALFREFRKPD-----------------------------------IVAY 290
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL--SGCASVGALIHGKETHCYT 261
+ +I GY G +L++F+++ ++ TLVSL+ SG + IHG Y
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHG-----YC 345
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K N+ V A+ +Y+K I AR +FD +P ++++ +W AMI GY Q
Sbjct: 346 LKS--NF----LSHASVSTALTTVYSKLNEIESARKLFDE-SP-EKSLPSWNAMISGYTQ 397
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+G D++ LF +M K + S PN TI+C L ACA+L AL G+ +H V ++S +
Sbjct: 398 NGLTEDAISLFREMQKSEFS--PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
YV+ LI Y+K G I AR +FD M KN V+W ++I+GYG+HGQG+EA+ +F EM
Sbjct: 456 -YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ P +TFL +LYACSH+G+V EG + F+ M YG P +HYACMVD+LGRAG L
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A++ IE M ++PG VW LL CR H++ L + KL EL+ +N G + LLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
R + +R K + K PG + ++ + F GD++HPQ + +Y L +L
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
+++ GY PET ALHDV++EE+ ++ HSE+LA+A+G++ + PG IRI KNLRVC D
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CHT IS I + I++RD++RFHHFK+G CSC +YW
Sbjct: 755 CHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 169/412 (41%), Gaps = 61/412 (14%)
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
Q H + G D+ + L + G ++ A +F +Q+ DV +N ++ G+S
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
++L++F +R +S KPN T
Sbjct: 98 SPHSSLSVFAHLR----------------------------------KSTDLKPNSSTYA 123
Query: 240 SLLSGCAS-----VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
+S + G +IHG+ D CD ELL+ + I+ MY K +
Sbjct: 124 FAISAASGFRDDRAGRVIHGQAV----------VDGCDS-ELLLGSNIVKMYFKFWRVED 172
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
AR +FD + KD + W MI GY ++ +S+++F ++ + + + T+ L
Sbjct: 173 ARKVFDRMPEKD--TILWNTMISGYRKNEMYVESIQVFRDLINES-CTRLDTTTLLDILP 229
Query: 355 ACARLAALRSGREIHAYVLRNQ-YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNA 413
A A L LR G +IH+ + Y D YV I YSK G I + +F + +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHD--YVLTGFISLYSKCGKIKMGSALFREFRKPDI 287
Query: 414 VSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSC 473
V++ ++I GY +G+ E ++ +F+E+ G T + ++ H ++ Y C
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY--C 345
Query: 474 MSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ + + + + + ++ A KL + P K W A++SG
Sbjct: 346 LKSNF--LSHASVSTALTTVYSKLNEIESARKLFDESPEK-SLPSWNAMISG 394
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/698 (37%), Positives = 396/698 (56%), Gaps = 70/698 (10%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ N+ N +V+ Y + G +D AR++FD M + ++VSW ++V YV +G A L
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER---NVVSWTALVKGYVHNGKVDVAESL 132
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F KM E + VS +L F G +++ +D S++
Sbjct: 133 FWKMPEK-------NKVSWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHG 181
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
K G + EA ++F+ M ++ V++W MVTGY ++A +F+ M E+ VSW
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSW 237
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
++++ GY Q G +A +F EV V + C
Sbjct: 238 TSMLMGYVQNGRIEDAEELF-----------EVMPVKPVIAC------------------ 268
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
NA+I + I+ AR +FDS+ K+RN +W +I + ++G
Sbjct: 269 ----------------NAMISGLGQKGEIAKARRVFDSM--KERNDASWQTVIKIHERNG 310
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
++L+LF +L Q + V+P T+ L CA LA+L G+++HA ++R Q+D DV Y
Sbjct: 311 FELEALDLF--ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV-Y 367
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
VA+ L+ Y K G++ ++++FD K+ + W S+I+GY HG GEEA+KVF EM G
Sbjct: 368 VASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 444 -LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
P+ +TF+ L ACS++GMV+EG+K + M +GV P HYACMVD+LGRAGR ++
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
AM++I+ M ++P VW +LL CR H + + EF A KL+E+E EN G+Y LLSN+YA+
Sbjct: 488 AMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYAS 547
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGD-RTHPQSERMYAILTELIQ 621
RW DV +R LMK ++K PGCSW + + F G +HP+ E + IL EL
Sbjct: 548 QGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDG 607
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
++ GY P+ S+ALHDVD+EEK + L HSE+LA+AY +L + G PIR+ KNLRVC D
Sbjct: 608 LLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSD 667
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CHTAI IS + + EIILRD++RFHHF+NG CSC++YW
Sbjct: 668 CHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 372 VLRNQYDSDVLY-VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
+LR Y + + AN I S+ G I AR +FD+ K+ SW S++ GY +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACM 490
+A K+F+EM + I++ ++ +G +DE K F M + V + +
Sbjct: 66 DARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWTAL 116
Query: 491 VDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
V G++D A L MP K +V W +L G
Sbjct: 117 VKGYVHNGKVDVAESLFWKMPEK-NKVSWTVMLIG 150
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/698 (35%), Positives = 405/698 (58%), Gaps = 51/698 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + + NA++ MY +CG + +A+ +F +M ++ ++VSWN+MV + GDT
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNK--NVVSWNTMVGGFSAEGDTHGTFD 379
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ ++M + D++ D V+++N +P K++H ++++ + V N+ V
Sbjct: 380 VLRQMLAGGE-DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YAKCG + A +V F +R + + S
Sbjct: 439 SYAKCGSLSYAQRV-------------------------------FHGIRSKTVN----S 463
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ +I G+AQ +L+ QM+ P+ T+ SLLS C+ + +L GKE H + I
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ L D L V +++ +Y C + +A+FD A +D+++V+W +I GY Q+
Sbjct: 524 RNWLERD------LFVYLSVLSLYIHCGELCTVQALFD--AMEDKSLVSWNTVITGYLQN 575
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G + +L +F QM+ ++ ++ AC+ L +LR GRE HAY L++ + D
Sbjct: 576 GFPDRALGVFRQMVLY--GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA- 632
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
++A LID Y+K+G I + VF+ +K K+ SW ++I GYG+HG +EA+K+FEEM++
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRT 692
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G PD +TFL +L AC+HSG++ EG++Y M +G+ P +HYAC++D+LGRAG+LDK
Sbjct: 693 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752
Query: 503 AMKLI-EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
A++++ E M + +W +LLS CR H+N+++GE A KL ELE E +Y LLSN+YA
Sbjct: 753 ALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
+W+DV ++R M ++K GCSW++ + +F VG+R E + ++ + L
Sbjct: 813 GLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 872
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGD 681
+I +GY P+T HD+ +EEK + L HSEKLAL YG++ ++ G IR+ KNLR+C D
Sbjct: 873 KISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVD 932
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CH A IS +++ EI++RD+ RFHHFKNG CSC +YW
Sbjct: 933 CHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 217/441 (49%), Gaps = 53/441 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++ +C ++TMY CG+ D +R +FD + +F WN+++++Y ++ L
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLF---QWNAVISSYSRNELYDEVLE 172
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F +M + D+ D + V+ A A M G VHG V++GL EDVFVGN
Sbjct: 173 TFIEM--ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN---- 226
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
A+V+ Y G +AL LF+ M E N+ VS
Sbjct: 227 ---------------------------ALVSFYGTHGFVTDALQLFDIMPERNL----VS 255
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSK----PNEVTLVSLLSGCASVGALIHGKETH 258
W+++I ++ G E+ + +M + P+ TLV++L CA + GK H
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
+ +K L+ EL++ NA++DMY+KC I+ A+ IF ++NVV+W M+GG
Sbjct: 316 GWAVKLRLD------KELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGG 367
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
++ G+ + + ++ QML VK + TI ++ C + L S +E+H Y L+ ++
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
+ L VAN + +Y+K G + A+ VF ++ K SW +LI G+ ++ +
Sbjct: 428 YNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 439 MRKEGLLPDGITFLVMLYACS 459
M+ GLLPD T +L ACS
Sbjct: 487 MKISGLLPDSFTVCSLLSACS 507
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAF-----TISCSLMACARLAALRSGREIHA 370
I + + G+ + S + + D S +AF + L A + + GR+IH
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDES-SSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ 108
Query: 371 YV-----LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
V LRN DVL +I Y+ G D +R VFD ++ KN W ++I+ Y
Sbjct: 109 LVSGSTRLRND---DVL--CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 426 HGQGEEAVKVFEEM-RKEGLLPDGITFLVMLYACSHSGMVDEGIKY-FSCMSKEYGVIPG 483
+ +E ++ F EM LLPD T+ ++ AC +GM D GI + + G++
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVED 221
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALL-----SGCRKHENVKLGEFA 538
+V G G + A++L + MP + V W +++ +G + + LGE
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMIRVFSDNGFSEESFLLLGEM- 279
Query: 539 ANKLLELESENDGSY 553
+E DG++
Sbjct: 280 ------MEENGDGAF 288
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/699 (37%), Positives = 393/699 (56%), Gaps = 63/699 (9%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
V + +V + ++T Y R L A +FDEM + D+VSWNSM++ V+ GD +A+
Sbjct: 61 VPSPHVSLYTKMITGYTRSNRLVDALNLFDEM---PVRDVVSWNSMISGCVECGDMNTAV 117
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF +M E S+ SW ++V
Sbjct: 118 KLFDEMPE--------------------RSVVSW----------------------TAMV 135
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+ + G + +A ++F +M KD +WN+MV GY G ++AL LF+QM +N V+
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN----VI 191
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
SW+T+I G Q EAL++F+ M C K +++ CA+ A G + H
Sbjct: 192 SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLI 251
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
IK Y E V ++I Y CK I +R +FD + V WTA++ GY+
Sbjct: 252 IKLGFLY------EEYVSASLITFYANCKRIGDSRKVFDEKVHE--QVAVWTALLSGYSL 303
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ + D+L +FS ML+ S+ PN T + L +C+ L L G+E+H ++ ++D
Sbjct: 304 NKKHEDALSIFSGMLRN--SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+V N L+ YS SG+++ A VF + K+ VSW S+I G HG+G+ A +F +M +
Sbjct: 362 -FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE-EHYACMVDLLGRAGRL 500
PD ITF +L ACSH G +++G K F MS I + +HY CMVD+LGR G+L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
+A +LIE M +KP ++VW+ALLS CR H +V GE AA + L+S++ +Y LLSNIY
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
A+A RW +V+++R MK GI K+PG SWV + FF GD+ P R+Y L L
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLR 598
Query: 621 QRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCG 680
+++K LGY P+ ALHDV+DE+K ++L+ HSE+LA+A+G++ + G + + KNLRVC
Sbjct: 599 EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCE 658
Query: 681 DCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCHT I IS ++ EI+LRD RFHHFKNG+CSC +YW
Sbjct: 659 DCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/763 (32%), Positives = 417/763 (54%), Gaps = 83/763 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S+ +VCNA+V++Y G L A +F M + D V++N+++ Q G + A+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR---DAVTYNTLINGLSQCGYGEKAME 375
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF++M +D ++ D+ +L +++ A ++ G+ + G+Q+H + + G + + +L++
Sbjct: 376 LFKRM--HLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 143 MYAKCGMMHEA-------------------------------SKVFERMQKKDVV----S 167
+YAKC + A ++F +MQ +++V +
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 168 WNAMVTGYSHIGMFENALTLFEQMREENIEL----------------------------- 198
+ +++ +G E + Q+ + N +L
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 199 --DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
DVVSW+T+IAGY Q +AL FRQM + +EV L + +S CA + AL G++
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
H C+ + +L NA++ +Y++C I + F+ D + W A++
Sbjct: 613 IHAQA--CVSGF----SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN--IAWNALV 664
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
G+ Q G ++L +F +M ++ + N FT ++ A + A ++ G+++HA + +
Sbjct: 665 SGFQQSGNNEEALRVFVRMNRE--GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
YDS+ V N LI Y+K G I A F + KN VSW ++I Y HG G EA+ F
Sbjct: 723 YDSET-EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
++M + P+ +T + +L ACSH G+VD+GI YF M+ EYG+ P EHY C+VD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
AG L +A + I+ MP+KP +VW LLS C H+N+++GEFAA+ LLELE E+ +Y LL
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
SN+YA +++W R MK G+KK PG SW++ K +F+VGD+ HP ++ ++
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYF 961
Query: 617 TELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNL 676
+L +R +GYV + L+++ E+K ++F HSEKLA+++G+L+ PI + KNL
Sbjct: 962 QDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNL 1021
Query: 677 RVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
RVC DCH I ++S + EII+RD+ RFHHF+ G+CSC++YW
Sbjct: 1022 RVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 237/511 (46%), Gaps = 58/511 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L + VCN ++ +Y R G +D AR++FD + + D SW +M++ ++ A+
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGL---RLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF M+ + I + +VL A + S G+Q+HG ++ G D +V N+LV
Sbjct: 275 LFCDMYVL---GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+Y G + A +F M ++D V++N ++ G S G E A+ LF++M + +E
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE----- 386
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
P+ TL SL+ C++ G L G++ H YT
Sbjct: 387 ------------------------------PDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K L + ++ E A++++Y KC I A F + + NVV W M+ Y
Sbjct: 417 K--LGFASNNKIE----GALLNLYAKCADIETALDYF--LETEVENVVLWNVMLVAYGLL 468
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ +S +F QM Q + PN +T L C RL L G +IH+ +++ + +
Sbjct: 469 DDLRNSFRIFRQM--QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA- 525
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
YV + LID Y+K G +D A + K+ VSWT++I GY + ++A+ F +M
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 443 GLLPDGITFLVMLYACSHSGMVDEG--IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
G+ D + + AC+ + EG I +C+S +P + +V L R G++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCGKI 642
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
+++ E + W AL+SG ++ N
Sbjct: 643 EESYLAFEQTEAGD-NIAWNALVSGFQQSGN 672
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 183/394 (46%), Gaps = 50/394 (12%)
Query: 113 GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMV 172
GS G+++H ++ GL + + L D Y G ++ A KVF+ M ++
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER--------- 149
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
T+F +W+ +I A + L E +F +M S +
Sbjct: 150 -------------TIF-------------TWNKMIKELASRNLIGEVFGLFVRMVSENVT 183
Query: 233 PNEVTLVSLLSGC--ASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
PNE T +L C SV A ++ H + L +D +V N +ID+Y++
Sbjct: 184 PNEGTFSGVLEACRGGSV-AFDVVEQIHARILYQGL------RDSTVVCNPLIDLYSRNG 236
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
+ +AR +FD + KD + +W AMI G +++ +++ LF M + P + S
Sbjct: 237 FVDLARRVFDGLRLKDHS--SWVAMISGLSKNECEAEAIRLFCDMYV--LGIMPTPYAFS 292
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
L AC ++ +L G ++H VL+ + SD YV N L+ Y G++ A +F NM
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDT-YVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
++AV++ +LI G G GE+A+++F+ M +GL PD T ++ ACS G + G +
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
+ +K G + +++L + ++ A+
Sbjct: 412 HAYTTK-LGFASNNKIEGALLNLYAKCADIETAL 444
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 232 KPNEVTLVSLLSGCASV-GALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
+PN TL LL GC G+L G++ H +K L+ + C ++L D Y
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF------DFYLFKG 134
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
+ A +FD + +R + TW MI A + LF +M+ ++ V PN T S
Sbjct: 135 DLYGAFKVFDEMP--ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN--VTPNEGTFS 190
Query: 351 CSLMAC-ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK 409
L AC A +IHA +L Q D V N LID YS++G +D+AR VFD ++
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILY-QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
K+ SW ++I+G + EA+++F +M G++P F +L AC ++ G +
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 470 YFSCMSKEYGVIPGEEHYAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ K + + Y C +V L G L A + M + V + L++G
Sbjct: 310 LHGLVLK---LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA-VTYNTLING 363
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 338 QDRSVKPNAFTISCSLMACARL-AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
++R ++PN T+ L C + +L GR++H+ +L+ DS+ ++ L D Y G
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC-LSEKLFDFYLFKG 134
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
D+ A VFD M + +W +I E +F M E + P+ TF +L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
AC + + ++ G+ ++DL R G +D A ++ +G+ +K
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD-H 253
Query: 517 VVWVALLSGCRKHE 530
WVA++SG K+E
Sbjct: 254 SSWVAMISGLSKNE 267
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/595 (39%), Positives = 354/595 (59%), Gaps = 47/595 (7%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G+ VH ++S D+ +GN+L++MYAKCG + EA KVFE+M ++D V+W +++GYS
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+AL F QM GY PNE T
Sbjct: 139 HDRPCDALLFFNQMLR---------------------FGYS--------------PNEFT 163
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L S++ A+ G + H + +KC + + + V +A++D+YT+ + A+
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN------VHVGSALLDLYTRYGLMDDAQL 217
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD++ + RN V+W A+I G+A+ +LELF ML+ +P+ F+ + AC+
Sbjct: 218 VFDAL--ESRNDVSWNALIAGHARRSGTEKALELFQGMLRD--GFRPSHFSYASLFGACS 273
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
L G+ +HAY++++ + V + N L+D Y+KSG I AR +FD + ++ VSW
Sbjct: 274 STGFLEQGKWVHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
SL+T Y HG G+EAV FEEMR+ G+ P+ I+FL +L ACSHSG++DEG Y+ M K+
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
G++P HY +VDLLGRAG L++A++ IE MP++P +W ALL+ CR H+N +LG +
Sbjct: 393 -GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTA 597
AA + EL+ ++ G + +L NIYA+ RW D R+R MK +G+KK P CSWV+ +
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 598 TFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLAL 657
F D HPQ E + E++ +IK LGYVP+TS + VD +E+ L HSEK+AL
Sbjct: 512 MFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIAL 571
Query: 658 AYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGS 712
A+ +L + PG I I KN+RVCGDCHTAI S ++ EII+RD++RFHHFK+ S
Sbjct: 572 AFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 207/449 (46%), Gaps = 69/449 (15%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ ++ + N ++ MY +CG+L+ AR++F++M + D V+W ++++ Y Q AL
Sbjct: 90 IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR---DFVTWTTLISGYSQHDRPCDAL 146
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
F +M+ + +L +V+ A A+ G Q+HGF V+ G +V VG++L+
Sbjct: 147 LFFN---QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL 203
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
D+Y + G+M +A VF+ ++ ++ VSWNA++ G++ E AL LF+ M +
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF----- 258
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+P+ + SL C+S G L GK H Y
Sbjct: 259 ------------------------------RPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 262 IKCILNYDRCDQDELLVI---NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
IK E LV N ++DMY K SI AR IFD +A +D VV+W +++
Sbjct: 289 IK---------SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRD--VVSWNSLLTA 337
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
YAQHG +++ F +M + ++PN + L AC+ L G + + ++
Sbjct: 338 YAQHGFGKEAVWWFEEMRRV--GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGE----EAV 433
+ + ++D ++GD++ A + M A W +L+ MH E A
Sbjct: 396 PEAWHYVT-VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSG 462
VFE L PD V+LY SG
Sbjct: 455 HVFE------LDPDDPGPHVILYNIYASG 477
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 14/234 (5%)
Query: 12 FCSCCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAY 71
FC C +SNV V +A++ +Y R G +D A+ +FD + E + VSWN+++A +
Sbjct: 186 FCVKCGF-----DSNVHVGSALLDLYTRYGLMDDAQLVFDAL---ESRNDVSWNALIAGH 237
Query: 72 VQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF 131
+ T+ AL LFQ M + + S ++ A +S G GK VH + ++SG
Sbjct: 238 ARRSGTEKALELFQGM---LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 132 EDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM 191
F GN+L+DMYAK G +H+A K+F+R+ K+DVVSWN+++T Y+ G + A+ FE+M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE---VTLVSLL 242
R I + +S+ +V+ + GL E + + M+ P VT+V LL
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L C L GR +HA++L++ + D++ + N L++ Y+K G ++ AR VF+ M ++
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIV-MGNTLLNMYAKCGSLEEARKVFEKMPQRD 125
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF--LVMLYACSHSGMVDEGIKY 470
V+WT+LI+GY H + +A+ F +M + G P+ T ++ A G +
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
F C+ + G + ++DL R G +D A + + + + V W AL++G
Sbjct: 186 F-CV--KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNALIAG 236
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/691 (36%), Positives = 397/691 (57%), Gaps = 57/691 (8%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++ V NA++TMY +CG + AR +FD M + D++SWN+M++ Y ++G L LF
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRR---DIISWNAMISGYFENGMCHEGLELF- 285
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ M + + D ++L +V+ A +G G+ +H + + +G D+ V NSL MY
Sbjct: 286 --FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
G EA K+F RM++K D+VSW+T
Sbjct: 344 NAGSWREAEKLFSRMERK-----------------------------------DIVSWTT 368
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC- 264
+I+GY L +A++ +R M KP+E+T+ ++LS CA++G L G E H IK
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+++Y ++V N +I+MY+KCK I A IF ++ K NV++WT++I G +
Sbjct: 429 LISY-------VIVANNLINMYSKCKCIDKALDIFHNIPRK--NVISWTSIIAGLRLNNR 479
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
++L QM +++PNA T++ +L ACAR+ AL G+EIHA+VLR D ++
Sbjct: 480 CFEALIFLRQM---KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD-FL 535
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N L+D Y + G ++ A F++ K K+ SW L+TGY GQG V++F+ M K +
Sbjct: 536 PNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRV 594
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD ITF+ +L CS S MV +G+ YFS M ++YGV P +HYAC+VDLLGRAG L +A
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
K I+ MP+ P VW ALL+ CR H + LGE +A + EL+ ++ G Y LL N+YA+
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+W++V ++R +MK G+ GCSWV+ K F D+ HPQ++ + +L +++
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Query: 625 VLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHT 684
+G + + D + + ++ HSE+ A+A+G++ + PG PI +TKNL +C +CH
Sbjct: 774 EVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHD 833
Query: 685 AISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
+ +IS ++ EI +RD+ FHHFK+G CSC
Sbjct: 834 TVKFISKTVRREISVRDAEHFHHFKDGECSC 864
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 222/461 (48%), Gaps = 64/461 (13%)
Query: 74 SGDTKSALGLFQKMWEM---VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL 130
+G + A+ L M E+ VD D+ + V L A G +V+ A+ S
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEE------GSKVYSIALSSMS 125
Query: 131 FEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQ 190
V +GN+ + M+ + G + +A VF +M ++++ SWN +V GY+ G F+ A+ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 191 MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
M W + G KP+ T +L C +
Sbjct: 186 ML----------W---VGGV---------------------KPDVYTFPCVLRTCGGIPD 211
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
L GKE H + ++ D + V+NA+I MY KC + AR +FD + P+ R+++
Sbjct: 212 LARGKEVHVHVVRYGYELD------IDVVNALITMYVKCGDVKSARLLFDRM-PR-RDII 263
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
+W AMI GY ++G ++ LELF M + SV P+ T++ + AC L R GR+IHA
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAM--RGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
YV+ + D+ V N L Y +G A +F M+ K+ VSWT++I+GY + +
Sbjct: 322 YVITTGFAVDI-SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK----EYGVIPGEEH 486
+A+ + M ++ + PD IT +L AC+ G +D G++ K Y ++
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-- 438
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
++++ + +DKA+ + +P K + W ++++G R
Sbjct: 439 ---LINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR 475
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 131/256 (51%), Gaps = 10/256 (3%)
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
+ G G EA+ + MQ +E V+L+ C A G + + + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ + + NA + M+ + ++ A +F ++ +RN+ +W ++GGYA+ G +
Sbjct: 126 SLG------VELGNAFLAMFVRFGNLVDAWYVFGKMS--ERNLFSWNVLVGGYAKQGYFD 177
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
+++ L+ +ML VKP+ +T C L C + L G+E+H +V+R Y+ D+ V N
Sbjct: 178 EAMCLYHRMLWVG-GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDI-DVVN 235
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
LI Y K GD+ AR++FD M ++ +SW ++I+GY +G E +++F MR + P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 447 DGITFLVMLYACSHSG 462
D +T ++ AC G
Sbjct: 296 DLMTLTSVISACELLG 311
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 182/402 (45%), Gaps = 31/402 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S V V N ++ MY +C +D A +F + + + +SW S++A + AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV---ISWTSIIAGLRLNNRCFEALI 485
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
++M + +Q +A++L L A A +G+ GK++H +R+G+ D F+ N+L+D
Sbjct: 486 FLRQM----KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY +CG M+ A F QKKDV SWN ++TGYS G + LF++M + + D ++
Sbjct: 542 MYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ +++ G ++ + + L F +M+ PN ++ G L +E H +
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGEL---QEAHKFIQ 657
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG-YAQ 321
K + D V A+++ I + + D+ V + ++ YA
Sbjct: 658 KMPVTPDPA------VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYAD 711
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G+ + ++ K R +K N T+ A + + ++HA++ ++Y
Sbjct: 712 CGK-------WREVAKVRRMMKENGLTVD------AGCSWVEVKGKVHAFLSDDKYHPQT 758
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY 423
+ L Y K ++ + ++ + + +S + G+
Sbjct: 759 KEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGH 800
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/600 (38%), Positives = 364/600 (60%), Gaps = 40/600 (6%)
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
+VH + +G +D F+ L+ MY+ G + A KVF++ +K+ + WNA+ + G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
E L L+ +M +E D +++ V +++C
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYV-------------------LKAC---------- 188
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+ S C +V L+ GKE H + + R + ++ ++DMY + + A +F
Sbjct: 189 -VASEC-TVNHLMKGKEIHAHLTR------RGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
+ RNVV+W+AMI YA++G+A ++L F +M+++ + PN+ T+ L ACA L
Sbjct: 241 GGMPV--RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
AAL G+ IH Y+LR DS +L V + L+ Y + G ++V + VFD M ++ VSW SL
Sbjct: 299 AALEQGKLIHGYILRRGLDS-ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
I+ YG+HG G++A+++FEEM G P +TF+ +L ACSH G+V+EG + F M +++G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAA 539
+ P EHYACMVDLLGRA RLD+A K+++ M +PG VW +LL CR H NV+L E A+
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477
Query: 540 NKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATF 599
+L LE +N G+Y LL++IYA A+ W +V R++ L++H G++K PG W++ ++ +F
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSF 537
Query: 600 FVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAY 659
D +P E+++A L +L + +K GY+P+T L++++ EEK ++ HSEKLALA+
Sbjct: 538 VSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAF 597
Query: 660 GILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
G++ ++ GEPIRITKNLR+C DCH +IS ++ EI++RD +RFH FKNG CSC +YW
Sbjct: 598 GLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 195/416 (46%), Gaps = 58/416 (13%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ + F+ ++ MY G++D+AR++FD+ K I+ WN++ A +G + LGL
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIY---VWNALFRALTLAGHGEEVLGL 165
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFA----SMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
+ W+M + ++ D + VL A ++ GK++H R G V++ +
Sbjct: 166 Y---WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
LVDMYA+ G + AS VF M ++VVSW+AM+ Y+ G
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK------------------- 263
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQM--QSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+EAL FR+M ++ S PN VT+VS+L CAS+ AL GK
Sbjct: 264 ----------------AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H Y ++ R L VI+A++ MY +C + V + +FD + DR+VV+W ++I
Sbjct: 308 HGYILR------RGLDSILPVISALVTMYGRCGKLEVGQRVFDRM--HDRDVVSWNSLIS 359
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
Y HG ++++F +ML S P T L AC+ + G+ + + R+
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGAS--PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 378 DSDVLYVANCLIDTYSKSGDID-VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEA 432
+ C++D ++ +D A++V D W SL+ +HG E A
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 13/219 (5%)
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIH 369
++ +I + G+ ++ + SQ P+ T ++ C ++L +H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ------ESSPSQQTYELLILCCGHRSSLSDALRVH 100
Query: 370 AYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQG 429
++L N D D ++A LI YS G +D AR VFD + + W +L + G G
Sbjct: 101 RHILDNGSDQDP-FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVMLYACSHS----GMVDEGIKYFSCMSKEYGVIPGEE 485
EE + ++ +M + G+ D T+ +L AC S + +G + + +++ G
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSSHVY 218
Query: 486 HYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+VD+ R G +D A + GMP++ V W A+++
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 7/140 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S + V +A+VTMYGRCG L+ +++FD M+ D+VSWNS++++Y G K A+
Sbjct: 316 LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR---DVVSWNSLISSYGVHGYGKKAIQ 372
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS-GLFEDVFVGNSLV 141
+F+ EM+ V+ V+VL A + G GK++ R G+ + +V
Sbjct: 373 IFE---EMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV 429
Query: 142 DMYAKCGMMHEASKVFERMQ 161
D+ + + EA+K+ + M+
Sbjct: 430 DLLGRANRLDEAAKMVQDMR 449
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/675 (37%), Positives = 379/675 (56%), Gaps = 90/675 (13%)
Query: 46 ARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNV 105
AR++FDE+ + + + N M+ +YV +G + +F M +++ D + V
Sbjct: 93 ARKVFDEIPERNV---IIINVMIRSYVNNGFYGEGVKVF---GTMCGCNVRPDHYTFPCV 146
Query: 106 LPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDV 165
L A + G+ G+++HG A + GL +FVGN LV MY KCG + EA V + M ++
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-- 204
Query: 166 VSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ 225
DVVSW++++ GYAQ +AL V R+
Sbjct: 205 ---------------------------------DVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
M+S + T+ SLL ++
Sbjct: 232 MESVKISHDAGTMASLLPAVSN-------------------------------------- 253
Query: 286 YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
T +++ + +F + K ++V+W MIG Y ++ +++EL+S+M + +P+
Sbjct: 254 -TTTENVMYVKDMFFKMGKK--SLVSWNVMIGVYMKNAMPVEAVELYSRM--EADGFEPD 308
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
A +I+ L AC +AL G++IH Y+ R + ++L + N LID Y+K G ++ AR VF
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAKCGCLEKARDVF 367
Query: 406 DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVD 465
+NMK ++ VSWT++I+ YG G+G +AV +F +++ GL+PD I F+ L ACSH+G+++
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 466 EGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
EG F M+ Y + P EH ACMVDLLGRAG++ +A + I+ M M+P + VW ALL
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 526 CRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRP 585
CR H + +G AA+KL +L E G Y LLSNIYA A RW++VT IR++MK G+KK P
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 586 GCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKG 645
G S V+ + TF VGDR+HPQS+ +Y L L++++K LGYVP++ ALHDV++E+K
Sbjct: 548 GASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKE 607
Query: 646 DLLFDHSEKLALAYGILTSAPGE-----PIRITKNLRVCGDCHTAISYISMIIQHEIILR 700
L HSEKLA+ + ++ + E IRITKNLR+CGDCH A IS I EII+R
Sbjct: 608 THLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIR 667
Query: 701 DSSRFHHFKNGSCSC 715
D++RFH F+ G CSC
Sbjct: 668 DTNRFHVFRFGVCSC 682
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 70/270 (25%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHAR------------------------QMFDE------ 52
L+S +FV N +V+MYG+CG L AR Q FD+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 53 -----------------------------MYKSEIF------DLVSWNSMVAAYVQSGDT 77
MY ++F LVSWN M+ Y+++
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 78 KSALGLFQKMWEMVDVD-IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
A+ L+ +M + D + DAVS+ +VLPA + GK++HG+ R L ++ +
Sbjct: 291 VEAVELYSRM----EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
N+L+DMYAKCG + +A VFE M+ +DVVSW AM++ Y G +A+ LF ++++ +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQM 226
D +++ T +A + GL E + F+ M
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+ Y+ D+ AR VFD + +N + +I Y +G E VKVF M + PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
TF +L ACS SG + G K +K G+ +V + G+ G L +A ++
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 508 EGMPMKPGQVVWVALLSG-------------CRKHENVKLGEFAA 539
+ M + V W +L+ G CR+ E+VK+ A
Sbjct: 199 DEMSRR-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/684 (36%), Positives = 381/684 (55%), Gaps = 90/684 (13%)
Query: 37 YGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQ 96
Y + AR++FDE+ + + + N M+ +YV +G + +F M +++
Sbjct: 84 YASLKDVASARKVFDEIPERNV---IIINVMIRSYVNNGFYGEGVKVF---GTMCGCNVR 137
Query: 97 LDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKV 156
D + VL A + G+ G+++HG A + GL +FVGN LV MY KCG + EA V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 157 FERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLG 216
+ M ++ DVVSW++++ GYAQ
Sbjct: 198 LDEMSRR-----------------------------------DVVSWNSLVVGYAQNQRF 222
Query: 217 YEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL 276
+AL V R+M+S + T+ SLL ++
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSN----------------------------- 253
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
T +++ + +F + K ++V+W MIG Y ++ +++EL+S+M
Sbjct: 254 ----------TTTENVMYVKDMFFKMGKK--SLVSWNVMIGVYMKNAMPVEAVELYSRM- 300
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+ +P+A +I+ L AC +AL G++IH Y+ R + ++L + N LID Y+K G
Sbjct: 301 -EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAKCG 358
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
++ AR VF+NMK ++ VSWT++I+ YG G+G +AV +F +++ GL+PD I F+ L
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
ACSH+G+++EG F M+ Y + P EH ACMVDLLGRAG++ +A + I+ M M+P +
Sbjct: 419 ACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNE 478
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
VW ALL CR H + +G AA+KL +L E G Y LLSNIYA A RW++VT IR++M
Sbjct: 479 RVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFAL 636
K G+KK PG S V+ + TF VGDR+HPQS+ +Y L L++++K LGYVP++ AL
Sbjct: 539 KSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598
Query: 637 HDVDDEEKGDLLFDHSEKLALAYGILTSAPGE-----PIRITKNLRVCGDCHTAISYISM 691
HDV++E+K L HSEKLA+ + ++ + E IRITKNLR+CGDCH A IS
Sbjct: 599 HDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQ 658
Query: 692 IIQHEIILRDSSRFHHFKNGSCSC 715
I EII+RD++RFH F+ G CSC
Sbjct: 659 ITSREIIIRDTNRFHVFRFGVCSC 682
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 156/353 (44%), Gaps = 77/353 (21%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S +FV N +V+MYG+CG L AR + DEM + D+VSWNS+V Y Q+ AL
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR---DVVSWNSLVVGYAQNQRFDDALE 227
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS---WWFGKQVHGFAVRSGLFEDVFVGNS 139
+ + EM V I DA ++ ++LPA ++ + + +S + +V +G
Sbjct: 228 VCR---EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIG-- 282
Query: 140 LVDMYAKCGMMHEASKVFERMQ----KKDVVSW--------------------------- 168
+Y K M EA +++ RM+ + D VS
Sbjct: 283 ---VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 169 --------NAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
NA++ Y+ G E A +FE M+ DVVSW+ +I+ Y G G +A+
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAV 395
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE-----THCYTIKCILNYDRCDQDE 275
+F ++Q P+ + V+ L+ C+ G L G+ T Y I L + C
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC---- 451
Query: 276 LLVINAIIDMYTKCKSISVA-RAIFD-SVAPKDRNVVTWTAMIGGYAQHGEAN 326
++D+ + + A R I D S+ P +R W A++G H + +
Sbjct: 452 ------MVDLLGRAGKVKEAYRFIQDMSMEPNER---VWGALLGACRVHSDTD 495
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+ Y+ D+ AR VFD + +N + +I Y +G E VKVF M + PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
TF +L ACS SG + G K +K G+ +V + G+ G L +A ++
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 508 EGMPMKPGQVVWVALLSG-------------CRKHENVKLGEFAA 539
+ M + V W +L+ G CR+ E+VK+ A
Sbjct: 199 DEMSRR-DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/723 (34%), Positives = 403/723 (55%), Gaps = 79/723 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++FV N++V Y CG LD AR++FDEM + + VSW SM+ Y + K A+ LF
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNV---VSWTSMICGYARRDFAKDAVDLFF 224
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + D ++ ++V++V V+ A A + G++V+ F SG+ + + ++LVDMY
Sbjct: 225 RM--VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC + A ++F+ ++ NAM + Y G+ AL +F M + +
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV--------- 333
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+P+ ++++S +S C+ + ++ GK H Y ++
Sbjct: 334 --------------------------RPDRISMLSAISSCSQLRNILWGKSCHGYVLRN- 366
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
++ D + NA+IDMY KC A IFD ++ ++ VVTW +++ GY ++GE
Sbjct: 367 -GFESWDN----ICNALIDMYMKCHRQDTAFRIFDRMS--NKTVVTWNSIVAGYVENGEV 419
Query: 326 NDSLELFSQMLKQD-------------RSVKPNAFTISCSLM-----------------A 355
+ + E F M +++ S+ A + CS+ A
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C L AL + I+ Y+ +N DV + L+D +S+ GD + A +F+++ +++ +
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
WT+ I M G E A+++F++M ++GL PDG+ F+ L ACSH G+V +G + F M
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
K +GV P + HY CMVDLLGRAG L++A++LIE MPM+P V+W +LL+ CR NV++
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
+AA K+ L E GSY LLSN+YA+A RW D+ ++R MK G++K PG S +Q +
Sbjct: 659 AYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGK 718
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKL 655
T F GD +HP+ + A+L E+ QR LG+VP+ S L DVD++EK +L HSEKL
Sbjct: 719 THEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKL 778
Query: 656 ALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
A+AYG+++S G IRI KNLRVC DCH+ + S + EIILRD++RFH+ + G CSC
Sbjct: 779 AMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSC 838
Query: 716 RNY 718
++
Sbjct: 839 GDF 841
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 226/480 (47%), Gaps = 83/480 (17%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
+NS++ Y SG A+ LF +M ++ I D + L A A + G Q+HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRM---MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
V+ G +D+FV NSLV YA+CG + A KVF+ M +++VVSW +M+ GY+ ++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
A+ LF FR ++ PN VT+V ++S
Sbjct: 219 AVDLF----------------------------------FRMVRDEEVTPNSVTMVCVIS 244
Query: 244 GCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVA 303
CA + L G++ + + + + L+++A++DMY KC +I VA+ +FD
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVND------LMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALR 363
N+ AM Y + G ++L +F+ M+ D V+P+ ++ ++ +C++L +
Sbjct: 299 AS--NLDLCNAMASNYVRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSCSQLRNIL 354
Query: 364 SGREIHAYVLRNQYDS-DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
G+ H YVLRN ++S D + N LID Y K D A +FD M +K V+W S++ G
Sbjct: 355 WGKSCHGYVLRNGFESWD--NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 423 YGMHG----------------------------QG---EEAVKVFEEMR-KEGLLPDGIT 450
Y +G QG EEA++VF M+ +EG+ DG+T
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 451 FLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
+ + AC H G +D K+ ++ G+ +VD+ R G + AM + +
Sbjct: 473 MMSIASACGHLGALDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/764 (35%), Positives = 417/764 (54%), Gaps = 85/764 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
S++FV NA+V MY R G L ARQ+FDEM + DLVSWNS+++ Y G + AL
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEM---PVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
++ E+ + I D+ ++ +VLPAF ++ G+ +HGFA++SG+ V V N LV
Sbjct: 194 IYH---ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY K +A +VF+ M +D VS+N M+ GY + M E ++ +F + ++ + D+++
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLT 309
Query: 203 WSTVI---------------------AG--------------YAQKGLGYEALNVFRQMQ 227
S+V+ AG YA+ G A +VF M+
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 228 S-------------------------------CHSKPNEVTLVSLLSGCASVGALIHGKE 256
+ + +T + L+S + L GK
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
H IK + D L V NA+IDMY KC + + IF S+ D VTW +I
Sbjct: 430 LHSNGIKSGICID------LSVSNALIDMYAKCGEVGDSLKIFSSMGTGD--TVTWNTVI 481
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
+ G+ L++ +QM K + V P+ T +L CA LAA R G+EIH +LR
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
Y+S+ L + N LI+ YSK G ++ + VF+ M ++ V+WT +I YGM+G+GE+A++ F
Sbjct: 540 YESE-LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+M K G++PD + F+ ++YACSHSG+VDEG+ F M Y + P EHYAC+VDLL R
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSR 658
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
+ ++ KA + I+ MP+KP +W ++L CR +++ E + +++EL ++ G L
Sbjct: 659 SQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILA 718
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
SN YA R+W V+ IR +K I K PG SW++ K F GD + PQSE +Y L
Sbjct: 719 SNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSL 778
Query: 617 TELIQRIKVLGYVPETSFALHDV-DDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKN 675
L + GY+P+ ++ ++EEK L+ HSE+LA+A+G+L + PG P+++ KN
Sbjct: 779 EILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKN 838
Query: 676 LRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
LRVCGDCH IS I+ EI++RD++RFH FK+G+CSC++ W
Sbjct: 839 LRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 228/483 (47%), Gaps = 71/483 (14%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
WNS++ A+ ++G AL + K+ E + D + +V+ A A + G V+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRE---SKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
+ G D+FVGN+LVDMY++ G++ A +VF+ M +D+VSWN++++GYS G +E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
AL ++ +++ SW P+ T+ S+L
Sbjct: 191 ALEIYHELKN--------SWIV---------------------------PDSFTVSSVLP 215
Query: 244 GCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVA 303
++ + G+ H + +K +N + L + MY K + + AR +FD +
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL------VAMYLKFRRPTDARRVFDEMD 269
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALR 363
+D V++ MI GY + +S+ +F + L Q KP+ T+S L AC L L
Sbjct: 270 VRDS--VSYNTMICGYLKLEMVEESVRMFLENLDQ---FKPDLLTVSSVLRACGHLRDLS 324
Query: 364 SGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY 423
+ I+ Y+L+ + + V N LID Y+K GD+ AR VF++M+ K+ VSW S+I+GY
Sbjct: 325 LAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH-------SGMVDEGIKYFSCMSK 476
G EA+K+F+ M D IT+L+++ + G+ GIK C+
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGE 536
++D+ + G + ++K+ M V W ++S C V+ G+
Sbjct: 444 SVS--------NALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISAC-----VRFGD 489
Query: 537 FAA 539
FA
Sbjct: 490 FAT 492
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 182/356 (51%), Gaps = 19/356 (5%)
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
++ YSH ++L++F ++ +V W+++I +++ GL EAL + +++
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAK---NVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
P++ T S++ CA + E + IL D + +L V NA++DMY++
Sbjct: 102 VSPDKYTFPSVIKACAG----LFDAEMGDLVYEQIL--DMGFESDLFVGNALVDMYSRMG 155
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
++ AR +FD + +D +V+W ++I GY+ HG ++LE++ ++ ++ + P++FT+S
Sbjct: 156 LLTRARQVFDEMPVRD--LVSWNSLISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVS 211
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
L A L ++ G+ +H + L++ +S V+ L+ Y K AR VFD M
Sbjct: 212 SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG-LVAMYLKFRRPTDARRVFDEMDV 270
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI-K 469
+++VS+ ++I GY EE+V++F E + PD +T +L AC H + D + K
Sbjct: 271 RDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH--LRDLSLAK 327
Query: 470 YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
Y + G + ++D+ + G + A + M K V W +++SG
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISG 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM 408
IS +L + + L LR IHA V+ DS + LID YS + + VF +
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFRRV 65
Query: 409 KH-KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS---HSGMV 464
KN W S+I + +G EA++ + ++R+ + PD TF ++ AC+ + M
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
D + M E + G +VD+ R G L +A ++ + MP++ V W +L+S
Sbjct: 126 DLVYEQILDMGFESDLFVGN----ALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLIS 180
Query: 525 GCRKH 529
G H
Sbjct: 181 GYSSH 185
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
CCL+ + S + + NA++ MY +CG L+++ ++F+ M + D+V+W M+ AY G
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR---DVVTWTGMIYAYGMYG 589
Query: 76 DTKSALGLFQKM 87
+ + AL F M
Sbjct: 590 EGEKALETFADM 601
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 268/698 (38%), Positives = 394/698 (56%), Gaps = 56/698 (8%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V + N +V MY +CG++ AR++F M D VSWNSM+ Q+G A+ ++
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDK---DSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M DI + +L++ L + AS+ G+Q+HG +++ G+ +V V N+L+ +YA+
Sbjct: 406 MRRH---DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G ++E K +F M E D VSW+++
Sbjct: 463 TGYLNECRK-------------------------------IFSSMPEH----DQVSWNSI 487
Query: 207 IAGYAQKGLGY-EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
I A+ EA+ F Q K N +T S+LS +S+ GK+ H +K
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ DE NA+I Y KC + IF +A + R+ VTW +MI GY +
Sbjct: 548 I------ADEATTENALIACYGKCGEMDGCEKIFSRMAER-RDNVTWNSMISGYIHNELL 600
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+L+L ML+ + + ++F + L A A +A L G E+HA +R +SDV+ V
Sbjct: 601 AKALDLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV-VG 657
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
+ L+D YSK G +D A F+ M +N+ SW S+I+GY HGQGEEA+K+FE M+ +G
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 446 P-DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
P D +TF+ +L ACSH+G+++EG K+F MS YG+ P EH++CM D+LGRAG LDK
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVK--LGEFAANKLLELESENDGSYTLLSNIYAN 562
IE MPMKP ++W +L C + K LG+ AA L +LE EN +Y LL N+YA
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQR 622
RW+D+ + R MK +KK G SWV K G F GD++HP ++ +Y L EL ++
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRK 897
Query: 623 IKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGE-PIRITKNLRVCGD 681
++ GYVP+T FAL+D++ E K ++L HSEKLA+A+ + PIRI KNLRVCGD
Sbjct: 898 MRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGD 957
Query: 682 CHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CH+A YIS I +IILRDS+RFHHF++G+CSC ++W
Sbjct: 958 CHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 231/513 (45%), Gaps = 54/513 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ +V++CN ++ Y G AR++FDEM + + VSW +V+ Y ++G+ K AL
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEM---PLRNCVSWACIVSGYSRNGEHKEALV 88
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS--WWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ +MV I + + V+VL A +GS FG+Q+HG + D V N L
Sbjct: 89 FLR---DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ MY KC IG AL F + +N
Sbjct: 146 ISMYWKC------------------------------IGSVGYALCAFGDIEVKN----S 171
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
VSW+++I+ Y+Q G A +F MQ S+P E T SL++ S L
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLE 228
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
I C + D L V + ++ + K S+S AR +F+ + + RN VT ++ G
Sbjct: 229 QIMCTIQKSGLLTD-LFVGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVGLV 285
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA---ALRSGREIHAYVLRNQY 377
+ ++ +LF M V P ++ I S LA L+ GRE+H +V+
Sbjct: 286 RQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE 437
++ + N L++ Y+K G I AR VF M K++VSW S+ITG +G EAV+ ++
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
MR+ +LP T + L +C+ G + S + G+ ++ L
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
G L++ K+ MP + QV W +++ + E
Sbjct: 464 GYLNECRKIFSSMP-EHDQVSWNSIIGALARSE 495
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 195/402 (48%), Gaps = 55/402 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT-KSAL 81
++ NV V NA++T+Y G L+ R++F M + D VSWNS++ A +S + A+
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH---DQVSWNSIIGALARSERSLPEAV 502
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
F +L+ ++ +VL A +S+ GKQ+HG A+++ + ++ N+L+
Sbjct: 503 VCFLNAQR---AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 142 DMYAKCGMMHEASKVFERM-QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
Y KCG M K+F RM +++D V+WN+M++GY H + AL L M + LD
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
++TV++ + ASV L G E H
Sbjct: 620 FMYATVLSAF-----------------------------------ASVATLERGMEVHAC 644
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+++ C + +++V +A++DMY+KC + A F+++ RN +W +MI GYA
Sbjct: 645 SVRA------CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYSWNSMISGYA 696
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-S 379
+HG+ ++L+LF M K D P+ T L AC+ L G + H + + Y +
Sbjct: 697 RHGQGEEALKLFETM-KLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLA 754
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLI 420
+ +C+ D ++G++D + M K N + W +++
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 17 CLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD 76
C V L S+V V +A+V MY +CG LD+A + F+ M + + SWNSM++ Y + G
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM---PVRNSYSWNSMISGYARHGQ 700
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFG-KQVHGFAVRSGLFEDVF 135
+ AL LF+ M +D D V+ V VL A + G G K + GL +
Sbjct: 701 GEEALKLFETM--KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 758
Query: 136 VGNSLVDMYAKCGMMHEASKVFERM-QKKDVVSWNAMV 172
+ + D+ + G + + E+M K +V+ W ++
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/699 (35%), Positives = 390/699 (55%), Gaps = 57/699 (8%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+SN FV A++ Y CG++D AR +F+ + D+V W +V+ YV++G + +L L
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGILCK---DIVVWAGIVSCYVENGYFEDSLKL 234
Query: 84 FQ--KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+M + + D L A +G++ F K VHG +++ D VG L+
Sbjct: 235 LSCMRMAGFMPNNYTFDTA-----LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+Y + G M +A KVF M K DVV
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKN-----------------------------------DVV 314
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
WS +IA + Q G EA+++F +M+ PNE TL S+L+GCA G++ H
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K + D + V NA+ID+Y KC+ + A +F ++ K N V+W +I GY
Sbjct: 375 VKVGFDLD------IYVSNALIDVYAKCEKMDTAVKLFAELSSK--NEVSWNTVIVGYEN 426
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
GE + +F + L+ SV T S +L ACA LA++ G ++H ++ ++
Sbjct: 427 LGEGGKAFSMFREALRNQVSV--TEVTFSSALGACASLASMDLGVQVHGLAIKTN-NAKK 483
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ V+N LID Y+K GDI A+ VF+ M+ + SW +LI+GY HG G +A+++ + M+
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
P+G+TFL +L CS++G++D+G + F M +++G+ P EHY CMV LLGR+G+LD
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
KAMKLIEG+P +P ++W A+LS N + +A ++L++ +++ +Y L+SN+YA
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
A++W +V IR MK G+KK PG SW++ + F VG HP + + +L L
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGIL-TSAPGEPIRITKNLRVCG 680
+ GYVP+ + L D+DDEEK L+ HSE+LALAYG++ + I I KNLR+C
Sbjct: 724 KATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICS 783
Query: 681 DCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCH+A+ IS I+Q ++++RD +RFHHF G CSC ++W
Sbjct: 784 DCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 197/422 (46%), Gaps = 54/422 (12%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
+VL+ V V ++ +Y + G + A ++F+EM K+ D+V W+ M+A + Q+G A
Sbjct: 278 YVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMPKN---DVVPWSFMIARFCQNGFCNEA 332
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ LF +M E V + S++N G G+Q+HG V+ G D++V N+L
Sbjct: 333 VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG---LGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+D+YAKC M A K+F + K+ VSWN ++ GY ++G A ++F + + +
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV-- 447
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
EVT S L CAS+ ++ G + H
Sbjct: 448 ---------------------------------TEVTFSSALGACASLASMDLGVQVHGL 474
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
IK + ++ V N++IDMY KC I A+++F+ + D V +W A+I GY+
Sbjct: 475 AIK------TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNALISGYS 526
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
HG +L + M +DR KPN T L C+ + G+E ++R+
Sbjct: 527 THGLGRQALRILDIM--KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEM 439
L C++ +SG +D A + + + ++ +V W ++++ E A + EE+
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 440 RK 441
K
Sbjct: 645 LK 646
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 24/372 (6%)
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
D+ + N ++ Y G ++AL LF++M E N VS+ T+ GYA + + + ++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERN----NVSFVTLAQGYACQ----DPIGLY 134
Query: 224 RQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAII 283
++ + N S L S+ H +K L YD V A+I
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVK--LGYD----SNAFVGAALI 188
Query: 284 DMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVK 343
+ Y+ C S+ AR +F+ + KD +V W ++ Y ++G DSL+L S M +
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKD--IVVWAGIVSCYVENGYFEDSLKLLSCM--RMAGFM 244
Query: 344 PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARV 403
PN +T +L A L A + +H +L+ Y D V L+ Y++ GD+ A
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP-RVGVGLLQLYTQLGDMSDAFK 303
Query: 404 VFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGM 463
VF+ M + V W+ +I + +G EAV +F MR+ ++P+ T +L C+
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 464 VDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALL 523
G + + K G ++D+ + ++D A+KL + K +V W ++
Sbjct: 364 SGLGEQLHGLVVK-VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVI 421
Query: 524 SGCRKHENVKLG 535
G +EN+ G
Sbjct: 422 VG---YENLGEG 430
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 23/288 (7%)
Query: 240 SLLSGCASVGALIHGKETHCYTIK---CILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
++L C I K HC +K C+ +L N +++ Y K A
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCL---------DLFATNILLNAYVKAGFDKDAL 104
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+FD + +RN V++ + GYA D + L+S++ ++ + P+ FT L
Sbjct: 105 NLFDEMP--ERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
A + +H+ +++ YDS+ +V LI+ YS G +D AR VF+ + K+ V W
Sbjct: 159 LDKAEICPW--LHSPIVKLGYDSNA-FVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
+++ Y +G E+++K+ MR G +P+ TF L A G D + K
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
V+ ++ L + G + A K+ MP K V W +++
Sbjct: 276 TCYVLDPRVGVG-LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIA 321
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/689 (34%), Positives = 374/689 (54%), Gaps = 74/689 (10%)
Query: 62 VSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV 121
+ +N + +S + ++ + +Q++ V +LD S + +L A + + + + G ++
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRH---VGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 122 HGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
HG A + D FV +DMYA CG ++ A VF+ M +DV
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV---------------- 177
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
V+W+T+I Y + GL EA +F +M+ + P+E+ L ++
Sbjct: 178 -------------------VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNI 218
Query: 242 LSGCASVGALIHGKETHCYTIKCILNYD-------------------------RCDQDEL 276
+S C G + + + + + I+ + D + L
Sbjct: 219 VSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
V A++ Y+KC + A+ IFD KD +V WT MI Y + ++L +F +M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKD--LVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+KP+ ++ + ACA L L + +H+ + N +S+ L + N LI+ Y+K G
Sbjct: 337 CS--GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE-LSINNALINMYAKCG 393
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
+D R VF+ M +N VSW+S+I MHG+ +A+ +F M++E + P+ +TF+ +LY
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
CSHSG+V+EG K F+ M+ EY + P EHY CMVDL GRA L +A+++IE MP+
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
V+W +L+S CR H ++LG+FAA ++LELE ++DG+ L+SNIYA +RW+DV IR +M
Sbjct: 514 VIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVM 573
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFAL 636
+ + K G S + + F +GD+ H QS +YA L E++ ++K+ GYVP+ L
Sbjct: 574 EEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVL 633
Query: 637 HDVDDEEKGDLLFDHSEKLALAYGILTSAPGEP------IRITKNLRVCGDCHTAISYIS 690
DV++EEK DL+ HSEKLAL +G++ E IRI KNLRVC DCH +S
Sbjct: 634 VDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVS 693
Query: 691 MIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+ + EII+RD +RFH +KNG CSCR+YW
Sbjct: 694 KVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 229/430 (53%), Gaps = 25/430 (5%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
FV + MY CG +++AR +FDEM D+V+WN+M+ Y + G A LF+
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHR---DVVTWNTMIERYCRFGLVDEAFKLFE-- 201
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
EM D ++ D + L N++ A G+ + + ++ F + + + D + +LV MYA
Sbjct: 202 -EMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G M A + F +M +++ AMV+GYS G ++A +F+Q ++ D+V W+T+I
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK----DLVCWTTMI 316
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH-CYTIKCIL 266
+ Y + EAL VF +M KP+ V++ S++S CA++G L K H C + +
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL- 375
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ EL + NA+I+MY KC + R +F+ + P+ RNVV+W++MI + HGEA+
Sbjct: 376 ------ESELSINNALINMYAKCGGLDATRDVFEKM-PR-RNVVSWSSMINALSMHGEAS 427
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
D+L LF++M +++ V+PN T L C+ + G++I A + + L
Sbjct: 428 DALSLFARMKQEN--VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 387 CLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
C++D + ++ + A V ++M N V W SL++ +HG+ E + F R L
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELE 543
Query: 446 PDGITFLVML 455
PD LV++
Sbjct: 544 PDHDGALVLM 553
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 51/320 (15%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N+FV A+V+ Y +CG LD A+ +FD+ K DLV W +M++AYV+S + AL +F+
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK---DLVCWTTMISAYVESDYPQEALRVFE 333
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM I+ D VS+ +V+ A A++G K VH +GL ++ + N+L++MYA
Sbjct: 334 ---EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + VFE+M +++VVSW++M+ S G +AL+LF +M++EN+E + V++
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
V+ G + GL E +F M T Y I
Sbjct: 451 VLYGCSHSGLVEEGKKIFASM------------------------------TDEYNITPK 480
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
L + C ++D++ + + A + +S+ P NVV W +++ HGE
Sbjct: 481 LEHYGC----------MVDLFGRANLLREALEVIESM-PVASNVVIWGSLMSACRIHGE- 528
Query: 326 NDSLELFSQMLKQDRSVKPN 345
LEL K+ ++P+
Sbjct: 529 ---LELGKFAAKRILELEPD 545
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S + + NA++ MY +CG LD R +F++M + ++VSW+SM+ A G+ AL
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRR---NVVSWSSMINALSMHGEASDALS 431
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG-FAVRSGLFEDVFVGNSLV 141
LF +M + +++ + V+ V VL + G GK++ + + +V
Sbjct: 432 LFARMKQE---NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 142 DMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG 174
D++ + ++ EA +V E M +VV W ++++
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 342/604 (56%), Gaps = 48/604 (7%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G++VH +++ ++ L+ Y KC + +A KV + M +K+V
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV------------ 118
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
VSW+ +I+ Y+Q G EAL VF +M KPNE T
Sbjct: 119 -----------------------VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
++L+ C L GK+ H +K NYD + V ++++DMY K I AR
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVK--WNYD----SHIFVGSSLLDMYAKAGQIKEARE 209
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
IF+ + +R+VV+ TA+I GYAQ G ++LE+F ++ + PN T + L A +
Sbjct: 210 IFECLP--ERDVVSCTAIIAGYAQLGLDEEALEMFHRL--HSEGMSPNYVTYASLLTALS 265
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
LA L G++ H +VLR + + + N LID YSK G++ AR +FDNM + A+SW
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLL-PDGITFLVMLYACSHSGMVDEGIKYFSCM-S 475
+++ GY HG G E +++F MR E + PD +T L +L CSH M D G+ F M +
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
EYG PG EHY C+VD+LGRAGR+D+A + I+ MP KP V +LL CR H +V +G
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIG 444
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
E +L+E+E EN G+Y +LSN+YA+A RW DV +R++M + K PG SW+Q ++
Sbjct: 445 ESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQT 504
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKL 655
F DRTHP+ E + A + E+ ++K GYVP+ S L+DVD+E+K +L HSEKL
Sbjct: 505 LHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKL 564
Query: 656 ALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
AL +G++ + G PIR+ KNLR+C DCH S + + E+ LRD +RFH +G CSC
Sbjct: 565 ALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSC 624
Query: 716 RNYW 719
+YW
Sbjct: 625 GDYW 628
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 197/386 (51%), Gaps = 51/386 (13%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
++ ++ YG+C L+ AR++ DEM + + VSW +M++ Y Q+G + AL +F
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV---VSWTAMISRYSQTGHSSEALTVFA- 142
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
EM+ D + + + VL + GKQ+HG V+ +FVG+SL+DMYAK
Sbjct: 143 --EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G + EA ++FE + ++DVVS A++ GY+ +G+ E AL +F ++ E +
Sbjct: 201 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM---------- 250
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
PN VT SLL+ + + L HGK+ HC+ ++ L
Sbjct: 251 -------------------------SPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ Q N++IDMY+KC ++S AR +FD++ +R ++W AM+ GY++HG
Sbjct: 286 PFYAVLQ------NSLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAMLVGYSKHGLGR 337
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVA 385
+ LELF ++++ ++ VKP+A T+ L C+ +G I ++ +Y +
Sbjct: 338 EVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHK 411
C++D ++G ID A M K
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Query: 18 LV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT 77
+V W +S++FV ++++ MY + G + AR++F+ + + D+VS +++A Y Q G
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER---DVVSCTAIIAGYAQLGLD 235
Query: 78 KSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
+ AL +F ++ + + V+ ++L A + + GKQ H +R L +
Sbjct: 236 EEALEMFHRLH---SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN-I 196
NSL+DMY+KCG + A ++F+ M ++ +SWNAM+ GYS G+ L LF MR+E +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQM 226
+ D V+ V++G + + LN+F M
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L AC ALR G+ +HA++++ +Y Y+ L+ Y K ++ AR V D M KN
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRY-LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
VSWT++I+ Y G EA+ VF EM + P+ TF +L +C + + G +
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 473 CMSK---EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ K + + G + ++D+ +AG++ +A ++ E +P + V A+++G +
Sbjct: 178 LIVKWNYDSHIFVG----SSLLDMYAKAGQIKEAREIFECLPER-DVVSCTAIIAG---Y 229
Query: 530 ENVKLGEFAANKLLELESE 548
+ L E A L SE
Sbjct: 230 AQLGLDEEALEMFHRLHSE 248
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/585 (40%), Positives = 362/585 (61%), Gaps = 27/585 (4%)
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+ + M EA ++F+ + + D S+N M++ Y FE A + F++M + D
Sbjct: 13 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----D 68
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
SW+T+I GYA++G +A +F M + NEV+ +++SG G L K +H
Sbjct: 69 AASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDL--EKASHF 122
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+ + + ++ A+I Y K K + +A A+F + ++N+VTW AMI GY
Sbjct: 123 FKVAPVRG--------VVAWTAMITGYMKAKKVELAEAMFKDMTV-NKNLVTWNAMISGY 173
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
++ D L+LF ML++ ++PN+ +S +L+ C+ L+AL+ GR+IH V ++ +
Sbjct: 174 VENSRPEDGLKLFRAMLEE--GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN 231
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
DV + + LI Y K G++ A +F+ MK K+ V+W ++I+GY HG ++A+ +F EM
Sbjct: 232 DVTALTS-LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 290
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
+ PD ITF+ +L AC+H+G+V+ G+ YF M ++Y V P +HY CMVDLLGRAG+
Sbjct: 291 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 350
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI 559
L++A+KLI MP +P V+ LL CR H+NV+L EFAA KLL+L S+N Y L+NI
Sbjct: 351 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 410
Query: 560 YANARRWKDVTRIRSLMKHTGI-----KKRPGCSWVQGKKGTATFFVGDRTHPQSERMYA 614
YA+ RW+DV R+R MK + + K PG SW++ + F DR HP+ + ++
Sbjct: 411 YASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHK 470
Query: 615 ILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITK 674
L EL +++K+ GY PE FALH+V++E+K LL HSEKLA+A+G + G I++ K
Sbjct: 471 KLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFK 530
Query: 675 NLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
NLR+CGDCH AI +IS I + EII+RD++RFHHFK+GSCSC +YW
Sbjct: 531 NLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 575
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 183/412 (44%), Gaps = 59/412 (14%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ + F N +++ Y R + A+ FD M D SWN+M+ Y + G+ + A
Sbjct: 33 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM---PFKDAASWNTMITGYARRGEMEKAR 89
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF M E +V SW N+++
Sbjct: 90 ELFYSMMEKNEV--------------------SW----------------------NAMI 107
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
Y +CG + +AS F+ + VV+W AM+TGY E A +F+ M + ++V
Sbjct: 108 SGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLV 164
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+W+ +I+GY + + L +FR M +PN L S L GC+ + AL G++ H
Sbjct: 165 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 224
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K L D + + ++I MY KC + A +F+ + KD VV W AMI GYAQ
Sbjct: 225 SKSTLCND------VTALTSLISMYCKCGELGDAWKLFEVMKKKD--VVAWNAMISGYAQ 276
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
HG A+ +L LF +M+ D ++P+ T L+AC + G ++R+
Sbjct: 277 HGNADKALCLFREMI--DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ 334
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEA 432
C++D ++G ++ A + +M + +A + +L+ +H E A
Sbjct: 335 PDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 386
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L ++V ++++MY +CG L A ++F+ M K D+V+WN+M++ Y Q G+ AL
Sbjct: 228 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK---DVVAWNAMISGYAQHGNADKAL 284
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHGFAVRSGLFEDVFV 136
LF+ EM+D I+ D ++ V VL A ++G +F V + V D +
Sbjct: 285 CLFR---EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQ--PDHYT 339
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+VD+ + G + EA K+ M + + + G + + L E E+ +
Sbjct: 340 --CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV---HKNVELAEFAAEKLL 394
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
+L+ S AGY Q Y + N + + + E +V +
Sbjct: 395 QLN----SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKV 435
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/702 (35%), Positives = 397/702 (56%), Gaps = 60/702 (8%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N+ N ++ MY +C A ++FD M + ++VSW+++++ +V +GD K +L LF
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPER---NVVSWSALMSGHVLNGDLKGSLSLFS 96
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM I + + L A + + G Q+HGF ++ G V VGNSLVDMY+
Sbjct: 97 ---EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 153
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG ++EA KVF R+ ++ ++SW+
Sbjct: 154 KCGRINEAEKVFRRI-----------------------------------VDRSLISWNA 178
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSK--PNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+IAG+ G G +AL+ F MQ + K P+E TL SLL C+S G + GK+ H + ++
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
+ C + +++D+Y KC + AR FD + K++ +++W+++I GYAQ G
Sbjct: 239 SGFH---CPSSAT-ITGSLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEG 292
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR--NQYDSDV 381
E +++ LF ++ Q+ + + ++F +S + A A LR G+++ A ++ + ++ V
Sbjct: 293 EFVEAMGLFKRL--QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
L N ++D Y K G +D A F M+ K+ +SWT +ITGYG HG G+++V++F EM +
Sbjct: 351 L---NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
+ PD + +L +L ACSHSGM+ EG + FS + + +G+ P EHYAC+VDLLGRAGRL
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A LI+ MP+KP +W LLS CR H +++LG+ LL ++++N +Y ++SN+Y
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYG 527
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
A W + R L G+KK G SWV+ ++ F G+ +HP + + L E +
Sbjct: 528 QAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAER 587
Query: 622 RIK-VLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSA---PGEPIRITKNLR 677
R++ LGYV LHD+DDE K + L HSEKLA+ + T G+ IR+ KNLR
Sbjct: 588 RLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLR 647
Query: 678 VCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
VC DCH I +S I + ++RD+ RFH F++G CSC +YW
Sbjct: 648 VCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 27/336 (8%)
Query: 233 PNE-VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKS 291
PN+ LVS+L C G G + HCY +K + L+ N +IDMY KC+
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLN------LITSNYLIDMYCKCRE 56
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
+A +FDS+ +RNVV+W+A++ G+ +G+ SL LFS+M +Q + PN FT S
Sbjct: 57 PLMAYKVFDSMP--ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ--GIYPNEFTFST 112
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK 411
+L AC L AL G +IH + L+ ++ ++ V N L+D YSK G I+ A VF + +
Sbjct: 113 NLKACGLLNALEKGLQIHGFCLKIGFEM-MVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 171
Query: 412 NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL--LPDGITFLVMLYACSHSGMVDEGIK 469
+ +SW ++I G+ G G +A+ F M++ + PD T +L ACS +GM+ G +
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 470 YFSCMSKEYGVIPGEEHY-ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
+ + P +VDL + G L A K + + K + W +L+ G +
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLILGYAQ 290
Query: 529 HENVKLGEFAA-----NKLLELESENDGSYTLLSNI 559
GEF +L EL S+ D S+ L S I
Sbjct: 291 E-----GEFVEAMGLFKRLQELNSQID-SFALSSII 320
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+ + ++V +Y +CG L AR+ FD++ + ++SW+S++ Y Q G+ A+GLF
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEK---TMISWSSLILGYAQEGEFVEAMGLF 301
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVR--SGLFEDVFVGNSLVD 142
+++ E+ + Q+D+ +L +++ FA GKQ+ AV+ SGL V NS+VD
Sbjct: 302 KRLQEL---NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVD 356
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG++ EA K F MQ KDV+SW ++TGY G+ + ++ +F +M NIE D V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KP 233
+ V++ + G+ E +F ++ H KP
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/607 (37%), Positives = 356/607 (58%), Gaps = 51/607 (8%)
Query: 119 KQVHGFAVRSGL-FEDVFVGNSLVDMYAKCG---MMHEASKVFERMQKKDVVSWNAMVTG 174
+Q+H F++R G+ D +G L+ M A KVF +++K
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKP----------- 82
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ-SCHSKP 233
++V W+T+I GYA+ G A +++R+M+ S +P
Sbjct: 83 -----------------------INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP 119
Query: 234 NEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
+ T L+ ++ + G+ H I+ + V N+++ +Y C ++
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG------SLIYVQNSLLHLYANCGDVA 173
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
A +FD + KD +V W ++I G+A++G+ ++L L+++M + +KP+ FTI L
Sbjct: 174 SAYKVFDKMPEKD--LVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLL 229
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNA 413
ACA++ AL G+ +H Y+++ + L+ +N L+D Y++ G ++ A+ +FD M KN+
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRN-LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 414 VSWTSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
VSWTSLI G ++G G+EA+++F+ M EGLLP ITF+ +LYACSH GMV EG +YF
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 348
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
M +EY + P EH+ CMVDLL RAG++ KA + I+ MPM+P V+W LL C H +
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 533 KLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQG 592
L EFA ++L+LE + G Y LLSN+YA+ +RW DV +IR M G+KK PG S V+
Sbjct: 409 DLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
Query: 593 KKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHS 652
F +GD++HPQS+ +YA L E+ R++ GYVP+ S DV++EEK + + HS
Sbjct: 469 GNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHS 528
Query: 653 EKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGS 712
EK+A+A+ ++++ PI + KNLRVC DCH AI +S + EI++RD SRFHHFKNGS
Sbjct: 529 EKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGS 588
Query: 713 CSCRNYW 719
CSC++YW
Sbjct: 589 CSCQDYW 595
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 193/393 (49%), Gaps = 51/393 (12%)
Query: 42 ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVS 101
+ +A ++F ++ K ++ WN+++ Y + G++ SA L+++M V ++ D +
Sbjct: 68 PMSYAHKVFSKIEKP--INVFIWNTLIRGYAEIGNSISAFSLYREM--RVSGLVEPDTHT 123
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
++ A +M G+ +H +RSG ++V NSL+ +YA CG + A KVF++M
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
+KD+V+WN+++ G++ G E AL L+ +M + I
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI------------------------- 218
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
KP+ T+VSLLS CA +GAL GK H Y IK L + L N
Sbjct: 219 ----------KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN------LHSSNV 262
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
++D+Y +C + A+ +FD + D+N V+WT++I G A +G +++ELF M +
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMV--DKNSVSWTSLIVGLAVNGFGKEAIELFKYM-ESTEG 319
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLIDTYSKSGDIDV 400
+ P T L AC+ ++ G E + +R +Y + + C++D +++G +
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 401 ARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEA 432
A +M N V W +L+ +HG + A
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 64/330 (19%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
S ++V N+++ +Y CG + A ++FD+M + DLV+WNS++ + ++G + AL
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK---DLVAWNSVINGFAENGKPEEALA 208
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ EM I+ D ++V++L A A +G+ GK+VH + ++ GL ++ N L+D
Sbjct: 209 LYT---EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+YA+CG + EA +F+ M K+ VSW +++ G
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG---------------------------- 297
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKETHCYT 261
A G G EA+ +F+ M+S P E+T V +L C +HC
Sbjct: 298 -------LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC-----------SHCGM 339
Query: 262 IKCILNYDRCDQDELLV------INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+K Y R ++E + ++D+ + + A S+ P NVV W +
Sbjct: 340 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM-PMQPNVVIWRTL 398
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+G HG+++ L F+++ Q ++PN
Sbjct: 399 LGACTVHGDSD--LAEFARI--QILQLEPN 424
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/683 (36%), Positives = 383/683 (56%), Gaps = 57/683 (8%)
Query: 39 RCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
+CG +D+ARQ+FD M + I V+WNS++A ++ +K A+ +++ M + ++ D
Sbjct: 111 KCGDIDYARQVFDGMSERHI---VTWNSLIAYLIKHRRSKEAVEMYRLM---ITNNVLPD 164
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL-FEDVFVGNSLVDMYAKCGMMHEASKVF 157
+L +V AF+ + ++ HG AV GL +VFVG++LVDMY K G EA V
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 158 ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
+R+++KD VV + +I GY+QKG
Sbjct: 225 DRVEEKD-----------------------------------VVLITALIVGYSQKGEDT 249
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
EA+ F+ M +PNE T S+L C ++ + +GK H +K Q LL
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 278 VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLK 337
MY +C + + +F + N V+WT++I G Q+G +L F +M++
Sbjct: 310 T------MYLRCSLVDDSLRVFKCIEYP--NQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 338 QDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD 397
S+KPN+FT+S +L C+ LA GR+IH V + +D D Y + LID Y K G
Sbjct: 362 D--SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK-YAGSGLIDLYGKCGC 418
Query: 398 IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
D+AR+VFD + + +S ++I Y +G G EA+ +FE M GL P+ +T L +L A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQV 517
C++S +V+EG + F K+ ++ +HYACMVDLLGRAGRL++A +++ + P V
Sbjct: 479 CNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLV 536
Query: 518 VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
+W LLS C+ H V++ E K+LE+E ++G+ L+SN+YA+ +W V ++S MK
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMK 596
Query: 578 HTGIKKRPGCSWVQGKKGTATFFVGDR-THPQSERMYAILTELIQRIKVLGYVPETSFAL 636
+KK P SWV+ K T TF GD +HP SE++ L ELI++ K LGYV + S
Sbjct: 597 DMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVF 656
Query: 637 HDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHE 696
D+++ K L HSEKLA+A+ + + G IRI KNLRVC DCH+ I +S +++ E
Sbjct: 657 QDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKRE 715
Query: 697 IILRDSSRFHHFKNGSCSCRNYW 719
II RDS RFHHF++GSCSC +YW
Sbjct: 716 IICRDSKRFHHFRDGSCSCGDYW 738
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 199/415 (47%), Gaps = 60/415 (14%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SNVFV +A+V MY + G A+ + D + E D+V +++ Y Q G+ A+ F
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRV---EEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
Q M +V+ +Q + + +VL + ++ GK +HG V+SG + SL+ MY
Sbjct: 256 QSM--LVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+C ++ ++ +VF+ ++ + VSW ++++G G E AL F +M ++I
Sbjct: 313 LRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI-------- 364
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
KPN TL S L GC+++ G++ H K
Sbjct: 365 ---------------------------KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY 397
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+ D+ + +ID+Y KC +AR +FD+++ D V++ MI YAQ+G
Sbjct: 398 GFDRDK------YAGSGLIDLYGKCGCSDMARLVFDTLSEVD--VISLNTMIYSYAQNGF 449
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
++L+LF +M+ + ++PN T+ L+AC + G E L + + D + +
Sbjct: 450 GREALDLFERMI--NLGLQPNDVTVLSVLLACNNSRLVEEGCE-----LFDSFRKDKIML 502
Query: 385 AN----CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKV 435
N C++D ++G ++ A ++ + + + V W +L++ +H + E A ++
Sbjct: 503 TNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI 557
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 186/385 (48%), Gaps = 47/385 (12%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K + ++SG F G+ LVD KCG + A +VF+ M ++ HI
Sbjct: 85 KTIQAHMLKSG-FPAEISGSKLVDASLKCGDIDYARQVFDGMSER-------------HI 130
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
V+W+++IA + EA+ ++R M + + P+E TL
Sbjct: 131 ----------------------VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
S+ + + + +H + IL + + + V +A++DMY K A+ +
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAV--ILGLEVSN---VFVGSALVDMYVKFGKTREAKLV 223
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
D V KD VV TA+I GY+Q GE ++++ F ML + V+PN +T + L++C
Sbjct: 224 LDRVEEKD--VVLITALIVGYSQKGEDTEAVKAFQSMLVE--KVQPNEYTYASVLISCGN 279
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
L + +G+ IH ++++ ++S L L+ Y + +D + VF +++ N VSWTS
Sbjct: 280 LKDIGNGKLIHGLMVKSGFES-ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
LI+G +G+ E A+ F +M ++ + P+ T L CS+ M +EG + ++K Y
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-Y 397
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKA 503
G + + ++DL G+ G D A
Sbjct: 398 GFDRDKYAGSGLIDLYGKCGCSDMA 422
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 156/320 (48%), Gaps = 29/320 (9%)
Query: 32 AVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
+++TMY RC +D + ++F + E + VSW S+++ VQ+G + AL F+KM M
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCI---EYPNQVSWTSLISGLVQNGREEMALIEFRKM--MR 361
Query: 92 DVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
D I+ ++ +L + L +++ + G+Q+HG + G D + G+ L+D+Y KCG
Sbjct: 362 D-SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 152 EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
A VF+ + + DV+S N M+ Y+ G AL LFE+M ++ + V+ +V+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 212 QKGL---GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
L G E + FR+ + + + +V LL + +E T + ++N
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRL------EEAEMLTTE-VINP 533
Query: 269 DRCDQDELLV---INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
D LL ++ ++M + + R I + + P D T M YA G+
Sbjct: 534 DLVLWRTLLSACKVHRKVEMAER-----ITRKILE-IEPGDEG--TLILMSNLYASTGKW 585
Query: 326 NDSLELFSQMLKQDRSVKPN 345
N +E+ S+M +D +K N
Sbjct: 586 NRVIEMKSKM--KDMKLKKN 603
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
FSQ+L+Q C ++ + I A++L++ + +++ + L+D
Sbjct: 68 FSQLLRQ-----------------CIDERSISGIKTIQAHMLKSGFPAEI--SGSKLVDA 108
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
K GDID AR VFD M ++ V+W SLI H + +EAV+++ M +LPD T
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY-----ACMVDLLGRAGRLDKAMKL 506
+ A S + E + S VI G E + +VD+ + G+ +A +
Sbjct: 169 SSVFKAFSDLSLEKEAQR-----SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLV 223
Query: 507 IEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRW 566
++ + K ++ ++ +K E+ + + + L+E N+ +Y + N +
Sbjct: 224 LDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 567 KDVTRIRSLMKHTGIK 582
+ I LM +G +
Sbjct: 284 GNGKLIHGLMVKSGFE 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ + + + ++ +YG+CG D AR +FD + SE+ D++S N+M+ +Y Q+G + AL
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTL--SEV-DVISLNTMIYSYAQNGFGREALD 455
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS--- 139
LF++ M+++ +Q + V++++VL A S + F S + + + N
Sbjct: 456 LFER---MINLGLQPNDVTVLSVL--LACNNSRLVEEGCELFD--SFRKDKIMLTNDHYA 508
Query: 140 -LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
+VD+ + G + EA + + D+V W +++
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/623 (38%), Positives = 355/623 (56%), Gaps = 52/623 (8%)
Query: 98 DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF 157
DA S +L + AS+ G+Q+H + G + FV +L+ MY KCG++ +A KVF
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVF 111
Query: 158 ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
E + +S V ++ +I+GY
Sbjct: 112 EENPQSSQLS---------------------------------VCYNALISGYTANSKVT 138
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
+A +FR+M+ + VT++ L+ C L G+ H +K L+ E+
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD------SEVA 192
Query: 278 VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLK 337
V+N+ I MY KC S+ R +FD + K ++TW A+I GY+Q+G A D LEL+ QM
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVK--GLITWNAVISGYSQNGLAYDVLELYEQM-- 248
Query: 338 QDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD 397
+ V P+ FT+ L +CA L A + G E+ V N + +V +V+N I Y++ G+
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV-FVSNASISMYARCGN 307
Query: 398 IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
+ AR VFD M K+ VSWT++I YGMHG GE + +F++M K G+ PDG F+++L A
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQV 517
CSHSG+ D+G++ F M +EY + PG EHY+C+VDLLGRAGRLD+AM+ IE MP++P
Sbjct: 368 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 518 VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
VW ALL C+ H+NV + E A K++E E N G Y L+SNIY++++ + + RIR +M+
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
Query: 578 HTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALH 637
+K+PG S+V+ K F GDR+H Q+E ++ +L EL + L
Sbjct: 488 ERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA-------GNM 540
Query: 638 DVD-DEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHE 696
D D EE +HSE+LA+A+GIL S PG I + KNLRVC DCH + +S I+ +
Sbjct: 541 DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQ 600
Query: 697 IILRDSSRFHHFKNGSCSCRNYW 719
++RD+SRFH+FK+G CSC++YW
Sbjct: 601 FVVRDASRFHYFKDGVCSCKDYW 623
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 210/451 (46%), Gaps = 52/451 (11%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
FV A+++MY +CG + AR++F+E +S V +N++++ Y + A +F++M
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLS-VCYNALISGYTANSKVTDAAYMFRRM 147
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
E + +D+V+++ ++P W G+ +HG V+ GL +V V NS + MY KC
Sbjct: 148 KE---TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G + ++F+ M K +++WNA+++GYS G+ + L L+EQM+ +
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV----------- 253
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
C P+ TLVS+LS CA +GA G E L
Sbjct: 254 ---------------------C---PDPFTLVSVLSSCAHLGAKKIGHEVG------KLV 283
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
+ V NA I MY +C +++ ARA+FD + K ++V+WTAMIG Y HG
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK--SLVSWTAMIGCYGMHGMGEI 341
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
L LF M+K R ++P+ L AC+ G E+ + R +C
Sbjct: 342 GLMLFDDMIK--RGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399
Query: 388 LIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
L+D ++G +D A ++M + W +L+ +H + A F ++ + P
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEP 457
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
+ I + V++ EGI M +E
Sbjct: 458 NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 161/324 (49%), Gaps = 12/324 (3%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ + A + L E+++++R M S P+ + +L CAS+ + G++ HC+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K C+ E V+ A+I MY KC ++ AR +F+ + V + A+I GY +
Sbjct: 81 K-----GGCET-EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTAN 134
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ D+ +F +M ++ V ++ T+ + C L GR +H ++ DS+V
Sbjct: 135 SKVTDAAYMFRRM--KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V N I Y K G ++ R +FD M K ++W ++I+GY +G + ++++E+M+
Sbjct: 193 -VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G+ PD T + +L +C+H G G + + + G +P + + R G L K
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 503 AMKLIEGMPMKPGQVVWVALLSGC 526
A + + MP+K V W A++ GC
Sbjct: 311 ARAVFDIMPVK-SLVSWTAMI-GC 332
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 116/205 (56%), Gaps = 6/205 (2%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S V V N+ +TMY +CG+++ R++FDEM + L++WN++++ Y Q+G L
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEM---PVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L++ +M + D +LV+VL + A +G+ G +V +G +VFV N+ +
Sbjct: 244 LYE---QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS 300
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYA+CG + +A VF+ M K +VSW AM+ Y GM E L LF+ M + I D
Sbjct: 301 MYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAV 360
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQ 227
+ V++ + GL + L +FR M+
Sbjct: 361 FVMVLSACSHSGLTDKGLELFRAMK 385
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/701 (35%), Positives = 382/701 (54%), Gaps = 57/701 (8%)
Query: 23 LNSNVF--VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
++N F V N ++ Y LD A +F+E+ + D V++N+++ Y + G +
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK---DSVTFNTLITGYEKDGLYTES 234
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ LF KM + Q + VL A + + G+Q+H +V +G D VGN +
Sbjct: 235 IHLFLKMRQSGH---QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI 291
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+D Y+K + E +F+ M ELD
Sbjct: 292 LDFYSKHDRVLETRMLFDEMP-----------------------------------ELDF 316
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
VS++ VI+ Y+Q +L+ FR+MQ ++LS A++ +L G++ HC
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 261 TIKCILNYDRCDQDELL-VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+ D +L V N+++DMY KC+ A IF S+ R V+WTA+I GY
Sbjct: 377 ALLAT-------ADSILHVGNSLVDMYAKCEMFEEAELIFKSLP--QRTTVSWTALISGY 427
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
Q G L+LF++M + +++ + T + L A A A+L G+++HA+++R+
Sbjct: 428 VQKGLHGAGLKLFTKM--RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
+V + + L+D Y+K G I A VF+ M +NAVSW +LI+ + +G GE A+ F +M
Sbjct: 486 NV-FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
+ GL PD ++ L +L ACSH G V++G +YF MS YG+ P ++HYACM+DLLGR GR
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESEND-GSYTLLSN 558
+A KL++ MP +P +++W ++L+ CR H+N L E AA KL +E D +Y +SN
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSN 664
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTE 618
IYA A W+ V ++ M+ GIKK P SWV+ F D+THP + + + E
Sbjct: 665 IYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINE 724
Query: 619 LIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRV 678
L I+ GY P+TS + DVD++ K + L HSE+LA+A+ ++++ G PI + KNLR
Sbjct: 725 LTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRA 784
Query: 679 CGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
C DCH AI IS I++ EI +RD+SRFHHF G CSC +YW
Sbjct: 785 CRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 231/509 (45%), Gaps = 64/509 (12%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ N N +++ + + G + AR +FD M + V+W ++ Y ++ A L
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV---VTWTILMGWYARNSHFDEAFKL 132
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF--VGNSLV 141
F++M + D V+ +LP QVH FAV+ G + F V N L+
Sbjct: 133 FRQMCRSSSCTLP-DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
Y + + A +FE + +KD V++N ++TGY G++ ++ LF +MR
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR--------- 242
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
QS H +P++ T +L + G++ H +
Sbjct: 243 -------------------------QSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHALS 276
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ + D V N I+D Y+K + R +FD + D V++ +I Y+Q
Sbjct: 277 VTTGFSRDAS------VGNQILDFYSKHDRVLETRMLFDEMPELD--FVSYNVVISSYSQ 328
Query: 322 HGEANDSLELFSQM--LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
+ SL F +M + DR P A +S + A L++L+ GR++H L DS
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIA----ANLSSLQMGRQLHCQALLATADS 384
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY---GMHGQGEEAVKVF 436
+L+V N L+D Y+K + A ++F ++ + VSWT+LI+GY G+HG G +K+F
Sbjct: 385 -ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLF 440
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+MR L D TF +L A + + G + + + + G + + +VD+ +
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAK 499
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G + A+++ E MP + V W AL+S
Sbjct: 500 CGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 193/418 (46%), Gaps = 19/418 (4%)
Query: 111 SMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNA 170
S ++ ++V +++G D N +V+ + G + A KV++ M K+ VS N
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM---Q 227
M++G+ G +A LF+ M + VV+W+ ++ YA+ EA +FRQM
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRT----VVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
SC + P+ VT +LL GC + H + +K L +D L V N ++ Y
Sbjct: 141 SC-TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK--LGFD--TNPFLTVSNVLLKSYC 195
Query: 288 KCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAF 347
+ + + +A +F+ + KD VT+ +I GY + G +S+ LF +M + +P+ F
Sbjct: 196 EVRRLDLACVLFEEIPEKDS--VTFNTLITGYEKDGLYTESIHLFLKMRQSGH--QPSDF 251
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDN 407
T S L A L G+++HA + + D V N ++D YSK + R++FD
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA-SVGNQILDFYSKHDRVLETRMLFDE 310
Query: 408 MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
M + VS+ +I+ Y Q E ++ F EM+ G F ML ++ + G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ C + +VD+ + ++A + + +P + V W AL+SG
Sbjct: 371 -RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISG 426
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/707 (35%), Positives = 394/707 (55%), Gaps = 64/707 (9%)
Query: 23 LNSNVFVCNAVVTMYGRC-GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
S+V V +++ M+ + + ++A ++FD+M SE+ ++V+W M+ +Q G + A+
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKM--SEL-NVVTWTLMITRCMQMGFPREAI 254
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
F +MV + D +L +V A A + + GKQ+H +A+RSGL +DV SLV
Sbjct: 255 RFF---LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLV 309
Query: 142 DMYAKC---GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
DMYAKC G + + KVF+RM+ +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRME-----------------------------------DH 334
Query: 199 DVVSWSTVIAGYAQK-GLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
V+SW+ +I GY + L EA+N+F +M H +PN T S C ++ GK+
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
K L + V N++I M+ K + A+ F+S++ K N+V++ +
Sbjct: 395 VLGQAFKRGLASNSS------VANSVISMFVKSDRMEDAQRAFESLSEK--NLVSYNTFL 446
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
G ++ + +L S++ +R + +AFT + L A + ++R G +IH+ V++
Sbjct: 447 DGTCRNLNFEQAFKLLSEI--TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
+ V N LI YSK G ID A VF+ M+++N +SWTS+ITG+ HG ++ F
Sbjct: 505 LSCN-QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+M +EG+ P+ +T++ +L ACSH G+V EG ++F+ M +++ + P EHYACMVDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
AG L A + I MP + +VW L CR H N +LG+ AA K+LEL+ +Y L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
SNIYA A +W++ T +R MK + K GCSW++ F+VGD HP + ++Y L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 617 TELIQRIKVLGYVPETSFALHDVDDEEKGD----LLFDHSEKLALAYGILTSAPGEPIRI 672
LI IK GYVP+T LH +++E LL+ HSEK+A+A+G+++++ P+R+
Sbjct: 744 DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRV 803
Query: 673 TKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
KNLRVCGDCH A+ YIS + EI+LRD +RFHHFK+G CSC +YW
Sbjct: 804 FKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 247/505 (48%), Gaps = 58/505 (11%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N+++++Y + G A +F+ M + D+VSW++M+A Y +G A+ +F E
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV---EF 157
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVDMYAKCGM 149
+++ + + V+ A ++ G+ GF +++G FE DV VG SL+DM+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 150 MHE-ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
E A KVF++M + +VV+W M+T +G A+ F M V++
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM--------------VLS 263
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
G+ + ++ TL S+ S CA + L GK+ H + I+ L
Sbjct: 264 GF---------------------ESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 269 DRCDQDELLVINAIIDMYTKCK---SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE- 324
D V +++DMY KC S+ R +FD + +D +V++WTA+I GY ++
Sbjct: 303 D--------VECSLVDMYAKCSADGSVDDCRKVFDRM--EDHSVMSWTALITGYMKNCNL 352
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
A +++ LFS+M+ Q V+PN FT S + AC L+ R G+++ + S+ V
Sbjct: 353 ATEAINLFSEMITQGH-VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS-SV 410
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
AN +I + KS ++ A+ F+++ KN VS+ + + G + E+A K+ E+ + L
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
TF +L ++ G + +G + S + K G+ + ++ + + G +D A
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKH 529
++ M + + W ++++G KH
Sbjct: 530 RVFNFMENR-NVISWTSMITGFAKH 553
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 19/305 (6%)
Query: 234 NEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
+ VT SLL C GK H I+ + D ++ N++I +Y+K +
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS------VLYNSLISLYSKSGDSA 114
Query: 294 VARAIFDSVAP-KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
A +F+++ R+VV+W+AM+ Y +G D++++F + L + + PN + +
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL--ELGLVPNDYCYTAV 172
Query: 353 LMACARLAALRSGREIHAYVLRN-QYDSDVLYVANCLIDTYSK-SGDIDVARVVFDNMKH 410
+ AC+ + GR ++++ ++SDV V LID + K + A VFD M
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVC-VGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
N V+WT +IT G EA++ F +M G D T + AC+ + G K
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQ 290
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRA---GRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
+ G++ E +VD+ + G +D K+ + M + W AL++G
Sbjct: 291 LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITGYM 347
Query: 528 KHENV 532
K+ N+
Sbjct: 348 KNCNL 352
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 373/635 (58%), Gaps = 77/635 (12%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
K +H V+ G+ + + N+LV++Y KCG SH
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCG-------------------------AASH 56
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEV 236
AL +F++M D ++W++V+ Q L + L+VF + S +P++
Sbjct: 57 ------ALQVFDEMPHR----DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
+L+ CA++G++ HG++ HC+ I + Y ++ +V ++++DMY KC ++ A+
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFI--VSEY----ANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQM--------------------- 335
A+FDS+ + +N ++WTAM+ GYA+ G ++LELF +
Sbjct: 161 AVFDSI--RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKG 218
Query: 336 ---------LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++++R + +S + ACA LAA +GR++H V+ +DS V +++N
Sbjct: 219 LEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV-FISN 277
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
LID Y+K D+ A+ +F M+H++ VSWTSLI G HGQ E+A+ ++++M G+ P
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP 337
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
+ +TF+ ++YACSH G V++G + F M+K+YG+ P +HY C++DLLGR+G LD+A L
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 507 IEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLL-ELESENDGSYTLLSNIYANARR 565
I MP P + W ALLS C++ ++G A+ L+ + ++ +Y LLSNIYA+A
Sbjct: 398 IHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
W V+ R + ++K PG S V+ +K T F+ G+ +HP E ++ +L +L + +++
Sbjct: 458 WGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRI 517
Query: 626 L-GYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHT 684
GYVP+TS+ LHD+D++EK LLF HSE+ A+AYG+L + PG PIRI KNLRVCGDCH
Sbjct: 518 RNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHV 577
Query: 685 AISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+ +IS I + EII+RD++R+HHFK G CSC ++W
Sbjct: 578 VLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 228/428 (53%), Gaps = 21/428 (4%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+ N +V +YG+CGA HA Q+FDEM D ++W S++ A Q+ S L
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHR---DHIAWASVLTALNQA--NLSGKTLSVFSS 94
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
++ D ++ A A++GS G+QVH + S D V +SLVDMYAKCG
Sbjct: 95 VGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCG 154
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+++ A VF+ ++ K+ +SW AMV+GY+ G E AL LF + +N+ SW+ +I+
Sbjct: 155 LLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALIS 210
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKP-NEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
G+ Q G G EA +VF +M+ + + L S++ CA++ A I G++ H I L
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA--LG 268
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
+D C + + NA+IDMY KC + A+ IF + + R+VV+WT++I G AQHG+A
Sbjct: 269 FDSC----VFISNALIDMYAKCSDVIAAKDIFSRM--RHRDVVSWTSLIVGMAQHGQAEK 322
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+L L+ M+ VKPN T + AC+ + + GRE+ + ++ L C
Sbjct: 323 ALALYDDMVSH--GVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 388 LIDTYSKSGDIDVARVVFDNMKH-KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
L+D +SG +D A + M + +W +L++ G+G+ +++ + + L
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Query: 447 DGITFLVM 454
D T++++
Sbjct: 441 DPSTYILL 448
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 83/365 (22%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMY---------------KS-------EIF------D 60
V +++V MY +CG L+ A+ +FD + KS E+F +
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 61 LVSWNSMVAAYVQSGDTKSALGLFQKMW-EMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
L SW ++++ +VQSG A +F +M E VD+ LD + L +++ A A++ + G+
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDI---LDPLVLSSIVGACANLAASIAGR 258
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
QVHG + G VF+ N+L+DMYAKC + A +F RM+ +DVVSW +++ G + G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
E AL L++ M + KPNEVT V
Sbjct: 319 QAEKALALYDDMVSHGV-----------------------------------KPNEVTFV 343
Query: 240 SLLSGCASVGALIHGKE-----THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
L+ C+ VG + G+E T Y I+ L + C ++D+ + +
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC----------LLDLLGRSGLLDE 393
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
A + ++ P + TW A++ + G + + ++ + P+ + + ++
Sbjct: 394 AENLIHTM-PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIY 452
Query: 355 ACARL 359
A A L
Sbjct: 453 ASASL 457
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L CAR L + + +HA++++ +AN L++ Y K G A VFD M H++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 413 AVSWTSLITGYGMHG-QGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYF 471
++W S++T G+ GL PD F ++ AC++ G +D G +
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG-RQV 127
Query: 472 SC--MSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG---- 525
C + EY E + +VD+ + G L+ A + + + +K + W A++SG
Sbjct: 128 HCHFIVSEYA--NDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKS 184
Query: 526 CRKHENVKL 534
RK E ++L
Sbjct: 185 GRKEEALEL 193
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S VF+ NA++ MY +C + A+ +F M D+VSW S++ Q G + AL
Sbjct: 269 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR---DVVSWTSLIVGMAQHGQAEKALA 325
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
L+ +MV ++ + V+ V ++ A F G F + +R L
Sbjct: 326 LYD---DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH----Y 378
Query: 138 NSLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG 174
L+D+ + G++ EA + M D +W A+++
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSA 416
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/701 (35%), Positives = 396/701 (56%), Gaps = 59/701 (8%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NVF N +V Y + + ARQ+FDE+ + D VS+N++++ Y + +T +A+ LF+
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQP---DTVSYNTLISGYADARETFAAMVLFK 129
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M ++ ++D +L ++ A KQ+H F+V G D Y+
Sbjct: 130 RMRKL---GFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGF-----------DSYS 173
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
NA VT YS G+ A+++F M E D VSW++
Sbjct: 174 SVN--------------------NAFVTYYSKGGLLREAVSVFYGMDELR---DEVSWNS 210
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I Y Q G +AL ++++M K + TL S+L+ S+ LI G++ H IK
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 266 LNYDRCDQDELLVINAIIDMYTKC---KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ + V + +ID Y+KC + + +F + D +V W MI GY+ +
Sbjct: 271 FHQNS------HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD--LVVWNTMISGYSMN 322
Query: 323 GE-ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
E + ++++ F QM Q +P+ + C AC+ L++ ++IH +++ S+
Sbjct: 323 EELSEEAVKSFRQM--QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ V N LI Y KSG++ AR VFD M NAVS+ +I GY HG G EA+ +++ M
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ P+ ITF+ +L AC+H G VDEG +YF+ M + + + P EHY+CM+DLLGRAG+L+
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A + I+ MP KPG V W ALL CRKH+N+ L E AAN+L+ ++ Y +L+N+YA
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYA 560
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
+AR+W+++ +R M+ I+K+PGCSW++ KK F D +HP + L E+++
Sbjct: 561 DARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMK 620
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDL---LFDHSEKLALAYGILTSAPGEPIRITKNLRV 678
++K +GYV + +A+ D+ +GD L HSEKLA+A+G++++ GE + + KNLR+
Sbjct: 621 KMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRI 680
Query: 679 CGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
CGDCH AI ++S + EII+RD+ RFH FK+G CSC +YW
Sbjct: 681 CGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 237/515 (46%), Gaps = 73/515 (14%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GK +H V+S + ++ N V++Y+KCG + A F ++ +V S+N +V Y+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
A LF+++ + D VS++T+I+GYA + A+ +F++M+ + + T
Sbjct: 87 DSKIHIARQLFDEIPQP----DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L L++ C LI K+ HC+++ +D V NA + Y+K + A +
Sbjct: 143 LSGLIAACCDRVDLI--KQLHCFSVSG--GFDSYSS----VNNAFVTYYSKGGLLREAVS 194
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+F + + R+ V+W +MI Y QH E +L L+ +M+ + K + FT++ L A
Sbjct: 195 VFYGM-DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF--KGFKIDMFTLASVLNALT 251
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDV---ARVVFDNMKHKNAV 414
L L GR+ H +++ + + +V + LID YSK G D + VF + + V
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 415 SWTSLITGYGMHGQ-GEEAVKVFEEMRKEGLLPDGITFLVMLYACSH------------- 460
W ++I+GY M+ + EEAVK F +M++ G PD +F+ + ACS+
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 461 -----------------------SGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
SG + + F M + V + CM+ +
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV-----SFNCMIKGYAQH 425
Query: 498 GRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLE---LESENDG 551
G +A+ L + M + P ++ +VA+LS C V G+ N + E +E E +
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE- 484
Query: 552 SYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPG 586
Y+ + ++ A + ++ R M + +PG
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPY-----KPG 514
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 382/645 (59%), Gaps = 54/645 (8%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+S ++VCNA++ MY RCG + A ++ +M + D+V+WNS++ YVQ+ K AL
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNA---DVVTWNSLIKGYVQNLMYKEALEF 336
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F +M+ + D VS+ +++ A + + G ++H + ++ G ++ VGN+L+DM
Sbjct: 337 FS---DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 393
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+KC + + F RM KD++S W
Sbjct: 394 YSKCNLTCYMGRAFLRMHDKDLIS-----------------------------------W 418
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+TVIAGYAQ EAL +FR + + +E+ L S+L + + +++ KE HC+ ++
Sbjct: 419 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 478
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
L D Q+EL +D+Y KC+++ A +F+S+ KD VV+WT+MI A +G
Sbjct: 479 KGL-LDTVIQNEL------VDVYGKCRNMGYATRVFESIKGKD--VVSWTSMISSSALNG 529
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
++++ELF +M++ S ++ + C L A A L+AL GREIH Y+LR + +
Sbjct: 530 NESEAVELFRRMVETGLSA--DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG-S 586
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
+A ++D Y+ GD+ A+ VFD ++ K + +TS+I YGMHG G+ AV++F++MR E
Sbjct: 587 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 646
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ PD I+FL +LYACSH+G++DEG + M EY + P EHY C+VD+LGRA + +A
Sbjct: 647 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 706
Query: 504 MKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
+ ++ M +P VW ALL+ CR H ++GE AA +LLELE +N G+ L+SN++A
Sbjct: 707 FEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 766
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRI 623
RW DV ++R+ MK +G++K PGCSW++ F D++HP+S+ +Y L+E+ +++
Sbjct: 767 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 826
Query: 624 -KVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPG 667
+ +GYV +T F LH+VD+ EK +L HSE++A+AYG ++ G
Sbjct: 827 EREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGKERASKG 871
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 234/508 (46%), Gaps = 68/508 (13%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
NS V V+ + G+ A+ + +FDEM F +WN+M+ AYV +G+ SAL L
Sbjct: 77 NSPVEAFAYVLELCGKRRAVSQEK-VFDEMPDRTAF---AWNTMIGAYVSNGEPASALAL 132
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
+ W M + L S +L A A + G ++H V+ G F+ N+LV M
Sbjct: 133 Y---WNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSM 189
Query: 144 YAKCGMMHEASKVFERMQKK-DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YAK + A ++F+ Q+K D V WN++++ YS
Sbjct: 190 YAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS-------------------------- 223
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
G E L +FR+M PN T+VS L+ C GKE H +
Sbjct: 224 ---------TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 274
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K EL V NA+I MYT+C + A I + D VVTW ++I GY Q+
Sbjct: 275 K-----SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD--VVTWNSLIKGYVQN 327
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
++LE FS M+ K + +++ + A RL+ L +G E+HAYV+++ +DS+ L
Sbjct: 328 LMYKEALEFFSDMIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN-L 384
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V N LID YSK F M K+ +SWT++I GY + EA+++F ++ K+
Sbjct: 385 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 444
Query: 443 GLLPDGITFLVMLYACS--HSGMVDEGIKYFSCMSKEYG----VIPGEEHYACMVDLLGR 496
+ D + +L A S S ++ +K C G VI E +VD+ G+
Sbjct: 445 RMEIDEMILGSILRASSVLKSMLI---VKEIHCHILRKGLLDTVIQNE-----LVDVYGK 496
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+ A ++ E + K V W +++S
Sbjct: 497 CRNMGYATRVFESIKGK-DVVSWTSMIS 523
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 217/431 (50%), Gaps = 55/431 (12%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+S F+ NA+V+MY + L AR++FD E D V WNS++++Y SG + L L
Sbjct: 177 HSTGFIVNALVSMYAKNDDLSAARRLFDGF--QEKGDAVLWNSILSSYSTSGKSLETLEL 234
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVD 142
F+ EM ++ ++V+ L A GK++H ++S +++V N+L+
Sbjct: 235 FR---EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 291
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY +CG M +A ER+ +R+ N DVV+
Sbjct: 292 MYTRCGKMPQA----ERI------------------------------LRQMN-NADVVT 316
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+++I GY Q + EAL F M + K +EV++ S+++ + L+ G E H Y I
Sbjct: 317 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 376
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCK-SISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K +D L V N +IDMY+KC + + RA D+++++WT +I GYAQ
Sbjct: 377 K--HGWD----SNLQVGNTLIDMYSKCNLTCYMGRAFLRM---HDKDLISWTTVIAGYAQ 427
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ ++LELF + K+ + + + L A + L ++ +EIH ++LR V
Sbjct: 428 NDCHVEALELFRDVAKKRMEI--DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV 485
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ N L+D Y K ++ A VF+++K K+ VSWTS+I+ ++G EAV++F M +
Sbjct: 486 --IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 543
Query: 442 EGLLPDGITFL 452
GL D + L
Sbjct: 544 TGLSADSVALL 554
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 11/302 (3%)
Query: 158 ERMQKKDVVSWNAMVTGYSHIGMF--ENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
E Q+ DV N+ V ++++ + E++ +E + +W+T+I Y G
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGE 125
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDE 275
AL ++ M+ + +LL CA + + G E H +K L Y
Sbjct: 126 PASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK--LGYHSTG--- 180
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQM 335
++NA++ MY K +S AR +FD K + V W +++ Y+ G++ ++LELF +M
Sbjct: 181 -FIVNALVSMYAKNDDLSAARRLFDGFQEKG-DAVLWNSILSSYSTSGKSLETLELFREM 238
Query: 336 LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKS 395
PN++TI +L AC + + G+EIHA VL++ S LYV N LI Y++
Sbjct: 239 --HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 296
Query: 396 GDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
G + A + M + + V+W SLI GY + +EA++ F +M G D ++ ++
Sbjct: 297 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 356
Query: 456 YA 457
A
Sbjct: 357 AA 358
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/551 (39%), Positives = 336/551 (60%), Gaps = 20/551 (3%)
Query: 169 NAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
N ++ Y + +A LF+QM + N V+SW+T+I+ Y++ + +AL + M
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRN----VISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 229 CHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTK 288
+ +PN T S+L C + + + HC IK L D + V +A+ID++ K
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESD------VFVRSALIDVFAK 206
Query: 289 CKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFT 348
A ++FD + D + W ++IGG+AQ+ ++ +LELF +M K+ + A T
Sbjct: 207 LGEPEDALSVFDEMVTGD--AIVWNSIIGGFAQNSRSDVALELFKRM-KRAGFIAEQA-T 262
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM 408
++ L AC LA L G + H ++++ YD D L + N L+D Y K G ++ A VF+ M
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVK--YDQD-LILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
K ++ ++W+++I+G +G +EA+K+FE M+ G P+ IT + +L+ACSH+G++++G
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 469 KYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
YF M K YG+ P EHY CM+DLLG+AG+LD A+KL+ M +P V W LL CR
Sbjct: 380 YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRV 439
Query: 529 HENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
N+ L E+AA K++ L+ E+ G+YTLLSNIYAN+++W V IR+ M+ GIKK PGCS
Sbjct: 440 QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499
Query: 589 WVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLL 648
W++ K F +GD +HPQ + L +LI R+ +GYVPET+F L D++ E+ D L
Sbjct: 500 WIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSL 559
Query: 649 FDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHF 708
HSEKLALA+G++T + IRI KNLR+CGDCH S + I++RD R+HHF
Sbjct: 560 RHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHF 619
Query: 709 KNGSCSCRNYW 719
++G CSC +YW
Sbjct: 620 QDGKCSCGDYW 630
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 200/396 (50%), Gaps = 59/396 (14%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
+F+ N ++ MY + L+ A Q+FD+M + + +SW +M++AY + + AL L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV---ISWTTMISAYSKCKIHQKALEL--- 149
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
+ M+ +++ + + +VL + M + +H ++ GL DVFV ++L+D++AK
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G +A VF+ M D + WN+++ G++ + AL LF++M+
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR------------- 253
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
AG+ + + TL S+L C + L G + H + +K
Sbjct: 254 -AGFIAE---------------------QATLTSVLRACTGLALLELGMQAHVHIVK--- 288
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
YD+ +L++ NA++DMY KC S+ A +F+ + K+R+V+TW+ MI G AQ+G +
Sbjct: 289 -YDQ----DLILNNALVDMYCKCGSLEDALRVFNQM--KERDVITWSTMISGLAQNGYSQ 341
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD-VLYVA 385
++L+LF +M + KPN TI L AC+ L G + ++ Y D V
Sbjct: 342 EALKLFERM--KSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHY 398
Query: 386 NCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLI 420
C+ID K+G +D A + + M+ +AV+W +L+
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 138/251 (54%), Gaps = 14/251 (5%)
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQM 335
+ ++N +I+MY K ++ A +FD + RNV++WT MI Y++ +LEL M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMP--QRNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 336 LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKS 395
L+ + V+PN +T S L +C ++ +R +H +++ +SDV +V + LID ++K
Sbjct: 154 LRDN--VRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDV-FVRSALIDVFAKL 207
Query: 396 GDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
G+ + A VFD M +A+ W S+I G+ + + + A+++F+ M++ G + + T +L
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 456 YACSHSGMVDEGIK-YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKP 514
AC+ +++ G++ + + + +I +VD+ + G L+ A+++ M +
Sbjct: 268 RACTGLALLELGMQAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDALRVFNQMKER- 322
Query: 515 GQVVWVALLSG 525
+ W ++SG
Sbjct: 323 DVITWSTMISG 333
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S+VFV +A++ ++ + G + A +FDEM D + WNS++ + Q+ + AL
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG---DAIVWNSIIGGFAQNSRSDVALE 246
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF++M + Q +L +VL A + G Q H V+ +D+ + N+LVD
Sbjct: 247 LFKRMKRAGFIAEQ---ATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVD 301
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + +A +VF +M+++DV++W+ M++G + G + AL LFE+M+ + + ++
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCH 230
V+ + GL + FR M+ +
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
++++ N LI+ Y K ++ A +FD M +N +SWT++I+ Y ++A+++ M
Sbjct: 95 MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML 154
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
++ + P+ T+ +L +C +GM D ++ C + G+ + ++D+ + G
Sbjct: 155 RDNVRPNVYTYSSVLRSC--NGMSD--VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSG 525
+ A+ + + M + +VW +++ G
Sbjct: 211 EDALSVFDEM-VTGDAIVWNSIIGG 234
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 371/664 (55%), Gaps = 49/664 (7%)
Query: 56 SEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSW 115
++ ++ +NS++ +V + L LF + + + L + VL A S
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH---GLYLHGFTFPLVLKACTRASSR 127
Query: 116 WFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGY 175
G +H V+ G DV SL+ +Y+ G +++A K+F+ + + VV+W A+ +GY
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY 187
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
+ G A+ LF++M E + KP+
Sbjct: 188 TTSGRHREAIDLFKKMVEMGV-----------------------------------KPDS 212
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
+V +LS C VG L G+ + +K + + Q V ++++Y KC + A
Sbjct: 213 YFIVQVLSACVHVGDLDSGE----WIVKYMEEMEM--QKNSFVRTTLVNLYAKCGKMEKA 266
Query: 296 RAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
R++FDS+ KD +VTW+ MI GYA + + +ELF QML+++ +KP+ F+I L +
Sbjct: 267 RSVFDSMVEKD--IVTWSTMIQGYASNSFPKEGIELFLQMLQEN--LKPDQFSIVGFLSS 322
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA L AL G + + R+++ ++ L++AN LID Y+K G + VF MK K+ V
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
+ I+G +G + + VF + K G+ PDG TFL +L C H+G++ +G+++F+ +S
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
Y + EHY CMVDL GRAG LD A +LI MPM+P +VW ALLSGCR ++ +L
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
E +L+ LE N G+Y LSNIY+ RW + +R +M G+KK PG SW++ +
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKL 655
F D++HP S+++YA L +L ++++G+VP T F DV++EEK +L HSEKL
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 656 ALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
A+A G++++ G+ IR+ KNLRVCGDCH + IS I + EI++RD++RFH F NGSCSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 716 RNYW 719
+YW
Sbjct: 682 NDYW 685
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 202/424 (47%), Gaps = 64/424 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
N +V +++++Y G L+ A ++FDE+ + V+W ++ + Y SG + A+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV---VTWTALFSGYTTSGRHREAID 198
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+KM EM ++ D+ +V VL A +G G+ + + + ++ FV +LV+
Sbjct: 199 LFKKMVEM---GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+YAKCG M +A VF+ M +KD+V+W+ M+ GY+ + + LF QM +EN+
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL------ 309
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
KP++ ++V LS CAS+GAL G+ + I
Sbjct: 310 -----------------------------KPDQFSIVGFLSSCASLGALDLGE----WGI 336
Query: 263 KCILNYDRCD-QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
I DR + L + NA+IDMY KC +++ +F + K++++V A I G A+
Sbjct: 337 SLI---DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIVIMNAAISGLAK 391
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIH-----AYVLRNQ 376
+G S +F Q + + P+ T L C ++ G Y L+
Sbjct: 392 NGHVKLSFAVFGQ--TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVA-RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKV 435
+ C++D + ++G +D A R++ D NA+ W +L++G + + A V
Sbjct: 450 VEH-----YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 436 FEEM 439
+E+
Sbjct: 505 LKEL 508
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 185/377 (49%), Gaps = 33/377 (8%)
Query: 187 LFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA 246
LF + NI L ++++I G+ L +E L++F ++ + T +L C
Sbjct: 67 LFSHTQFPNIFL----YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 247 SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD 306
+ G + H +KC N+D + + +++ +Y+ ++ A +FD + D
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHD------VAAMTSLLSIYSGSGRLNDAHKLFDEIP--D 174
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
R+VVTWTA+ GY G ++++LF +M++ VKP+++ I L AC + L SG
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEM--GVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMH 426
I Y+ + + +V L++ Y+K G ++ AR VFD+M K+ V+W+++I GY +
Sbjct: 233 WIVKYMEEMEMQKNS-FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
+E +++F +M +E L PD + + L +C+ G +D G E+G+ + H
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG---------EWGISLIDRH 342
Query: 487 --------YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFA 538
++D+ + G + + ++ + M K V+ A +SG K+ +VKL
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD-IVIMNAAISGLAKNGHVKLSFAV 401
Query: 539 ANKLLELESENDGSYTL 555
+ +L DGS L
Sbjct: 402 FGQTEKLGISPDGSTFL 418
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
++IH ++ + D ++ N L+ + ++F + + N + SLI G+
Sbjct: 30 KQIHVSLINHHLHHDT-FLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEE 485
+ E + +F +RK GL G TF ++L AC+ + GI S + K G
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVK-----CGFN 143
Query: 486 H-YACMVDLL---GRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
H A M LL +GRL+ A KL + +P + V W AL SG
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR-SVVTWTALFSG 186
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/615 (35%), Positives = 355/615 (57%), Gaps = 46/615 (7%)
Query: 105 VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD 164
+L A G+ K HG +R L DV + N L++ Y+KCG + A +VF+ M ++
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
+VSWN M+ Y+ M AL +F +MR E
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGF---------------------------- 150
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID 284
K +E T+ S+LS C + K+ HC ++K ++ + L V A++D
Sbjct: 151 -------KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN------LYVGTALLD 197
Query: 285 MYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
+Y KC I A +F+S+ +D++ VTW++M+ GY Q+ ++L L+ + Q S++
Sbjct: 198 LYAKCGMIKDAVQVFESM--QDKSSVTWSSMVAGYVQNKNYEEALLLYRR--AQRMSLEQ 253
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
N FT+S + AC+ LAAL G+++HA + ++ + S+V +VA+ +D Y+K G + + ++
Sbjct: 254 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV-FVASSAVDMYAKCGSLRESYII 312
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
F ++ KN W ++I+G+ H + +E + +FE+M+++G+ P+ +TF +L C H+G+V
Sbjct: 313 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 372
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+EG ++F M YG+ P HY+CMVD+LGRAG L +A +LI+ +P P +W +LL+
Sbjct: 373 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 432
Query: 525 GCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKR 584
CR ++N++L E AA KL ELE EN G++ LLSNIYA ++W+++ + R L++ +KK
Sbjct: 433 SCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 492
Query: 585 PGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEK 644
G SW+ K TF VG+ HP+ + + L L+ + + GY P LHDV+ +K
Sbjct: 493 RGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKK 552
Query: 645 GDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSR 704
+LL HSEKLAL +G++ P+RI KNLR+C DCH + SM + II+RD +R
Sbjct: 553 EELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Query: 705 FHHFKNGSCSCRNYW 719
FHHF +G CSC ++W
Sbjct: 613 FHHFSDGHCSCGDFW 627
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 200/422 (47%), Gaps = 60/422 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L +V + N ++ Y +CG ++ ARQ+FD M + LVSWN+M+ Y ++ AL
Sbjct: 84 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLER---SLVSWNTMIGLYTRNRMESEALD 140
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F EM + + ++ +VL A K++H +V++ + +++VG +L+D
Sbjct: 141 IF---LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLD 197
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+YAKCGM+ +A +VFE MQ K V+W++MV GY +E AL L
Sbjct: 198 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL--------------- 242
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+R+ Q + N+ TL S++ C+++ ALI GK+ H
Sbjct: 243 --------------------YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 282
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + + V ++ +DMY KC S+ + IF V +++N+ W +I G+A+H
Sbjct: 283 KSGFGSN------VFVASSAVDMYAKCGSLRESYIIFSEV--QEKNLELWNTIISGFAKH 334
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY--DSD 380
+ + LF +M Q + PN T S L C + GR ++R Y +
Sbjct: 335 ARPKEVMILFEKM--QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPN 391
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGE----EAVKV 435
V++ + C++D ++G + A + ++ S W SL+ ++ E A K+
Sbjct: 392 VVHYS-CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKL 450
Query: 436 FE 437
FE
Sbjct: 451 FE 452
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 130/222 (58%), Gaps = 7/222 (3%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C V ++ N++V A++ +Y +CG + A Q+F+ M V+W+SMVA YVQ+
Sbjct: 178 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK---SSVTWSSMVAGYVQNK 234
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ + AL L+++ M ++ + +L +V+ A +++ + GKQ+H +SG +VF
Sbjct: 235 NYEEALLLYRRAQRM---SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 291
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
V +S VDMYAKCG + E+ +F +Q+K++ WN +++G++ + + LFE+M+++
Sbjct: 292 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 351
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEV 236
+ + V++S++++ GL E F+ M++ + PN V
Sbjct: 352 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 393
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/568 (39%), Positives = 340/568 (59%), Gaps = 30/568 (5%)
Query: 174 GYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
Y+ G ++L LF Q I+ D+ ++ I + GL +A ++ Q+ S P
Sbjct: 73 AYASHGKIRHSLALFHQ----TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP 128
Query: 234 NEVTLVSLLSGCAS-VGALIH------GKETHCYTIKCILN--------------YDRCD 272
NE T SLL C++ G LIH G Y +++ +DR
Sbjct: 129 NEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
+ L+ A+I Y K ++ ARA+FDS+ +R++V+W MI GYAQHG ND+L LF
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMC--ERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
++L + + KP+ T+ +L AC+++ AL +GR IH +V ++ +V V LID Y
Sbjct: 247 QKLLAEGKP-KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNV-KVCTGLIDMY 304
Query: 393 SKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITF 451
SK G ++ A +VF++ K+ V+W ++I GY MHG ++A+++F EM+ GL P ITF
Sbjct: 305 SKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF 364
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
+ L AC+H+G+V+EGI+ F M +EYG+ P EHY C+V LLGRAG+L +A + I+ M
Sbjct: 365 IGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMN 424
Query: 512 MKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTR 571
M V+W ++L C+ H + LG+ A L+ L +N G Y LLSNIYA+ ++ V +
Sbjct: 425 MDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAK 484
Query: 572 IRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPE 631
+R+LMK GI K PG S ++ + F GDR H +S+ +Y +L ++ +RIK GYVP
Sbjct: 485 VRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544
Query: 632 TSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISM 691
T+ L D+++ EK L HSE+LA+AYG++++ PG P++I KNLRVC DCHT IS
Sbjct: 545 TNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISK 604
Query: 692 IIQHEIILRDSSRFHHFKNGSCSCRNYW 719
I +I++RD +RFHHF +GSCSC ++W
Sbjct: 605 ITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 221/458 (48%), Gaps = 43/458 (9%)
Query: 37 YGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW----EMVD 92
Y G + H+ +F + ++F + + +T S GL + + +++
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLF----------LFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
+I + + ++L + ++ GK +H ++ GL D +V LVD+YAK G +
Sbjct: 124 SEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A KVF+RM ++ +VS AM+T Y+ G E A LF+ M E D+VSW+ +I GYAQ
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM----CERDIVSWNVMIDGYAQ 235
Query: 213 KGLGYEALNVFRQ-MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY--TIKCILNYD 269
G +AL +F++ + KP+E+T+V+ LS C+ +GAL G+ H + + + LN
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 270 RCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSL 329
C +IDMY+KC S+ A +F+ KD +V W AMI GYA HG + D+L
Sbjct: 296 VC--------TGLIDMYSKCGSLEEAVLVFNDTPRKD--IVAWNAMIAGYAMHGYSQDAL 345
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
LF++M + ++P T +L ACA + G I + + + CL+
Sbjct: 346 RLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 390 DTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
++G + A NM ++V W+S++ +HG ++ E + + G
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 449 I-TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI--PG 483
I L +YA EG+ + KE G++ PG
Sbjct: 465 IYVLLSNIYASVGD---YEGVAKVRNLMKEKGIVKEPG 499
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 7/229 (3%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
A++T Y + G ++ AR +FD M + D+VSWN M+ Y Q G AL LFQK+ +
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCER---DIVSWNVMIDGYAQHGFPNDALMLFQKL--L 250
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ + D +++V L A + +G+ G+ +H F S + +V V L+DMY+KCG +
Sbjct: 251 AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMRE-ENIELDVVSWSTVIAG 209
EA VF +KD+V+WNAM+ GY+ G ++AL LF +M+ ++ +++ +
Sbjct: 311 EEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 210 YAQKGLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
A GL E + +F M Q KP L+S G L ET
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 48/188 (25%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV VC ++ MY +CG+L+ A +F++ + D+V+WN+M+A Y G ++ AL LF
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK---DIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + +Q ++ + L A A
Sbjct: 350 EMQGI--TGLQPTDITFIGTLQAC-----------------------------------A 372
Query: 146 KCGMMHEASKVFERMQ-----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
G+++E ++FE M K + + +V+ G + A +E ++ N++ D
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA---YETIKNMNMDADS 429
Query: 201 VSWSTVIA 208
V WS+V+
Sbjct: 430 VLWSSVLG 437
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 343/580 (59%), Gaps = 16/580 (2%)
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ MY+K G A V+ RM+KK+ +S N ++ GY G NA +F++M + +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL---- 56
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
+W+ +IAG Q E L++FR+M P+E TL S+ SG A + ++ G++ H Y
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
TIK L D L+V +++ MY + + + S+ RN+V W +I G A
Sbjct: 117 TIKYGLELD------LVVNSSLAHMYMRNGKLQDGEIVIRSMPV--RNLVAWNTLIMGNA 168
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
Q+G L L+ M + +PN T L +C+ LA G++IHA ++ S
Sbjct: 169 QNGCPETVLYLYKMM--KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 226
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
V V++ LI YSK G + A F + ++ V W+S+I+ YG HGQG+EA+++F M
Sbjct: 227 VAVVSS-LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 441 KEGLLP-DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
++ + + + FL +LYACSHSG+ D+G++ F M ++YG PG +HY C+VDLLGRAG
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI 559
LD+A +I MP+K V+W LLS C H+N ++ + ++L+++ + Y LL+N+
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 405
Query: 560 YANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTEL 619
+A+A+RW+DV+ +R M+ +KK G SW + K F +GDR+ +S+ +Y+ L EL
Sbjct: 406 HASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKEL 465
Query: 620 IQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVC 679
+K+ GY P+T+ LHD+D+EEK L HSEKLA+A+ ++ G PIRI KNLRVC
Sbjct: 466 TLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVC 525
Query: 680 GDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCH A YIS+I EI LRD SRFHHF NG CSC +YW
Sbjct: 526 SDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 195/415 (46%), Gaps = 51/415 (12%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N N ++ Y R G L +AR++FDEM + L +WN+M+A +Q + L LF+
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRK---LTTWNAMIAGLIQFEFNEEGLSLFR 80
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM + D +L +V A + S G+Q+HG+ ++ GL D+ V +SL MY
Sbjct: 81 ---EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 137
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ G + + V M +++V+WN ++ G + G E L L++ M+
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK------------- 184
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
I+G +PN++T V++LS C+ + G++ H IK
Sbjct: 185 -ISG---------------------CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI- 221
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ V++++I MY+KC + A F +D + V W++MI Y HG+
Sbjct: 222 -----GASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAYGFHGQG 274
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
++++ELF+ M +Q +++ N L AC+ G E+ ++ L
Sbjct: 275 DEAIELFNTMAEQT-NMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEM 439
C++D ++G +D A + +M K + V W +L++ +H E A +VF+E+
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 52/324 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++ V +++ MY R G L + M + +LV+WN+++ Q+G ++ L
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSM---PVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ KM ++ + + ++ V VL + + + G+Q+H A++ G V V +SL+
Sbjct: 179 LY-KMMKISGC--RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE-NIELDVV 201
MY+KCG + +A+K F + +D V W++M++ Y G + A+ LF M E+ N+E++ V
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
++ ++ + GL + L +F M Y
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMM------------------------------VEKYG 325
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K L + C ++D+ + + A AI S+ P ++V W ++
Sbjct: 326 FKPGLKHYTC----------VVDLLGRAGCLDQAEAIIRSM-PIKTDIVIWKTLLSACNI 374
Query: 322 HGEANDSLELFSQMLKQDRSVKPN 345
H A + +F ++L+ D PN
Sbjct: 375 HKNAEMAQRVFKEILQID----PN 394
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/694 (34%), Positives = 371/694 (53%), Gaps = 54/694 (7%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
F+ N ++ MY + LDH + + ++VSW S+++ Q+G +AL F
Sbjct: 43 FLANYLINMYSK---LDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEF--- 96
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
+EM + + + A AS+ GKQ+H AV+ G DVFVG S DMY K
Sbjct: 97 FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT 156
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
+ +A K LF+++ E N+E +W+ I
Sbjct: 157 RLRDDARK-------------------------------LFDEIPERNLE----TWNAFI 181
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
+ G EA+ F + + PN +T + L+ C+ L G + H ++ +
Sbjct: 182 SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
D + V N +ID Y KCK I + IF + K N V+W +++ Y Q+ E
Sbjct: 242 TD------VSVCNGLIDFYGKCKQIRSSEIIFTEMGTK--NAVSWCSLVAAYVQNHEDEK 293
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+ L+ + K V+ + F IS L ACA +A L GR IHA+ ++ + + +V +
Sbjct: 294 ASVLYLRSRKD--IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI-FVGSA 350
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM--RKEGLL 445
L+D Y K G I+ + FD M KN V+ SLI GY GQ + A+ +FEEM R G
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 410
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+ +TF+ +L ACS +G V+ G+K F M YG+ PG EHY+C+VD+LGRAG +++A +
Sbjct: 411 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 470
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
I+ MP++P VW AL + CR H +LG AA L +L+ ++ G++ LLSN +A A R
Sbjct: 471 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGR 530
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
W + +R +K GIKK G SW+ K F DR+H ++ + L +L ++
Sbjct: 531 WAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEA 590
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
GY P+ +L+D+++EEK + HSEKLALA+G+L+ PIRITKNLR+CGDCH+
Sbjct: 591 AGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSF 650
Query: 686 ISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
++S ++ EII+RD++RFH FK+G CSC++YW
Sbjct: 651 FKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 189/418 (45%), Gaps = 52/418 (12%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+VFV + MY + D AR++FDE+ + +L +WN+ ++ V G + A+ F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPER---NLETWNAFISNSVTDGRPREAIEAF- 197
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
E +D ++++ L A + G Q+HG +RSG DV V N L+D Y
Sbjct: 198 --IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC + + +F M K+ VSW ++V Y E A L+ + R++ +E
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET------- 308
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
++ + S+LS CA + L G+ H + +K
Sbjct: 309 ----------------------------SDFMISSVLSACAGMAGLELGRSIHAHAVKA- 339
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
C + + V +A++DMY KC I + FD + ++N+VT ++IGGYA G+
Sbjct: 340 -----CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP--EKNLVTRNSLIGGYAHQGQV 392
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYV 384
+ +L LF +M + PN T L AC+R A+ +G +I +R+ Y +
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYGIEPGAEH 451
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEMRK 441
+C++D ++G ++ A M + +S W +L MHG+ + + E + K
Sbjct: 452 YSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 55/350 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+++V VCN ++ YG+C + + +F EM + VSW S+VAAYVQ+ + + A
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK---NAVSWCSLVAAYVQNHEDEKASV 296
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ + + + ++ + +VL A A M G+ +H AV++ + +FVG++LVD
Sbjct: 297 LYLRSRKDI---VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVD 353
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + ++ + F+ M +K++V+ N+++ GY+H G + AL LFE+M
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM----------- 402
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET----- 257
A +G C PN +T VSLLS C+ GA+ +G +
Sbjct: 403 --------APRG--------------CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
Y I+ + C I+DM + + A + P + W A+
Sbjct: 441 STYGIEPGAEHYSC----------IVDMLGRAGMVERAYEFIKKM-PIQPTISVWGALQN 489
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
HG+ L + K D N +S + A R A + RE
Sbjct: 490 ACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
+++R GR +HA +++ ++AN LI+ YSK + AR+V +N VSWTSL
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
I+G +G A+ F EMR+EG++P+ TF
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 392/704 (55%), Gaps = 71/704 (10%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+V+VCN+++++Y + G A ++F+EM + D+VSWNSM++ Y+ GD S+L LF
Sbjct: 163 SDVYVCNSLISLYMKLGCAWDAEKVFEEMPER---DIVSWNSMISGYLALGDGFSSLMLF 219
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVDM 143
+ EM+ + D S ++ L A + + S GK++H AVRS + DV V S++DM
Sbjct: 220 K---EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+K G + A ++F M I+ ++V+W
Sbjct: 277 YSKYGEVSYAERIFNGM-----------------------------------IQRNIVAW 301
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ +I YA+ G +A F++M + +P+ +T ++LL A++ G+ H Y +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAM 357
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ R +++ A+IDMY +C + A IFD +A K NV++W ++I Y Q+
Sbjct: 358 R------RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK--NVISWNSIIAAYVQN 409
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G+ +LELF ++ D S+ P++ TI+ L A A +L GREIHAY+++++Y S+ +
Sbjct: 410 GKNYSALELFQELW--DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ N L+ Y+ GD++ AR F+++ K+ VSW S+I Y +HG G +V +F EM
Sbjct: 468 -ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
+ P+ TF +L ACS SGMVDEG +YF M +EYG+ PG EHY CM+DL+GR G
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A + +E MP P +W +LL+ R H+++ + EFAA ++ ++E +N G Y LL N+YA
Sbjct: 587 AKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAE 646
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQR 622
A RW+DV RI+ LM+ GI + S V+ K + F GDR+H + ++Y +L +++ R
Sbjct: 647 AGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL-DVVSR 705
Query: 623 IKVLGYVPETSFALHDVDDEEKGDLLFD-------HSEKLALAYGILTSAPGEPIRITKN 675
+ V E +H V L+ HS +LA +G++++ G + + N
Sbjct: 706 M-----VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNN 760
Query: 676 LRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
R+C CH + S + + EI++ DS FHHF NG CSC NYW
Sbjct: 761 TRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 219/425 (51%), Gaps = 54/425 (12%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
++ A Q+FDEM K++ F WN M+ + G A+ + +M V ++ D +
Sbjct: 80 MEDALQLFDEMNKADAF---LWNVMIKGFTSCGLYIEAVQFYSRM---VFAGVKADTFTY 133
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
V+ + A + S GK++H ++ G DV+V NSL+ +Y K G +A KVFE M +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
+D+VSWN+M++GY +G G+ +L +
Sbjct: 194 RDIVSWNSMISGYLALGD-----------------------------------GFSSLML 218
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
F++M C KP+ + +S L C+ V + GKE HC+ ++ R + +++V+ +I
Sbjct: 219 FKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR-----SRIETGDVMVMTSI 273
Query: 283 IDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
+DMY+K +S A IF+ + RN+V W MIG YA++G D+ F +M +Q+ +
Sbjct: 274 LDMYSKYGEVSYAERIFNGMI--QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN-GL 330
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR 402
+P+ T S +L+ +A+ GR IH Y +R + ++ + LID Y + G + A
Sbjct: 331 QPDVIT-SINLLPA---SAILEGRTIHGYAMRRGFLPHMV-LETALIDMYGECGQLKSAE 385
Query: 403 VVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
V+FD M KN +SW S+I Y +G+ A+++F+E+ L+PD T +L A + S
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 463 MVDEG 467
+ EG
Sbjct: 446 SLSEG 450
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
A +FD + D W MI G+ G ++++ +S+M+ VK + FT +
Sbjct: 83 ALQLFDEMNKAD--AFLWNVMIKGFTSCGLYIEAVQFYSRMVFA--GVKADTFTYPFVIK 138
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
+ A +++L G++IHA V++ + SDV YV N LI Y K G A VF+ M ++ V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDV-YVCNSLISLYMKLGCAWDAEKVFEEMPERDIV 197
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
SW S+I+GY G G ++ +F+EM K G PD + + L ACSH G K C
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG-KEIHCH 256
Query: 475 SKEYGVIPGEEH-YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
+ + G+ ++D+ + G + A ++ GM ++ V W ++ GC
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI-GC 307
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 296/445 (66%), Gaps = 6/445 (1%)
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQM 335
+ V N+++ +Y C ++ A +FD + KD +V W ++I G+A++G+ ++L L+++M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKD--LVAWNSVINGFAENGKPEEALALYTEM 80
Query: 336 LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKS 395
+ +KP+ FTI L ACA++ AL G+ +H Y+++ + L+ +N L+D Y++
Sbjct: 81 --NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN-LHSSNVLLDLYARC 137
Query: 396 GDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVM 454
G ++ A+ +FD M KN+VSWTSLI G ++G G+EA+++F+ M EGLLP ITF+ +
Sbjct: 138 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 197
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKP 514
LYACSH GMV EG +YF M +EY + P EH+ CMVDLL RAG++ KA + I+ MPM+P
Sbjct: 198 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 257
Query: 515 GQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRS 574
V+W LL C H + L EFA ++L+LE + G Y LLSN+YA+ +RW DV +IR
Sbjct: 258 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 317
Query: 575 LMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSF 634
M G+KK PG S V+ F +GD++HPQS+ +YA L E+ R++ GYVP+ S
Sbjct: 318 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 377
Query: 635 ALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQ 694
DV++EEK + + HSEK+A+A+ ++++ PI + KNLRVC DCH AI +S +
Sbjct: 378 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 437
Query: 695 HEIILRDSSRFHHFKNGSCSCRNYW 719
EI++RD SRFHHFKNGSCSC++YW
Sbjct: 438 REIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 47/323 (14%)
Query: 112 MGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAM 171
M G+ +H +RSG ++V NSL+ +YA CG + A KVF++M
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP---------- 50
Query: 172 VTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
E D+V+W++VI G+A+ G EAL ++ +M S
Sbjct: 51 -------------------------EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI 85
Query: 232 KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKS 291
KP+ T+VSLLS CA +GAL GK H Y IK L + L N ++D+Y +C
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN------LHSSNVLLDLYARCGR 139
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
+ A+ +FD + D+N V+WT++I G A +G +++ELF M + + P T
Sbjct: 140 VEEAKTLFDEMV--DKNSVSWTSLIVGLAVNGFGKEAIELFKYM-ESTEGLLPCEITFVG 196
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLIDTYSKSGDIDVARVVFDNMK- 409
L AC+ ++ G E + +R +Y + + C++D +++G + A +M
Sbjct: 197 ILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 255
Query: 410 HKNAVSWTSLITGYGMHGQGEEA 432
N V W +L+ +HG + A
Sbjct: 256 QPNVVIWRTLLGACTVHGDSDLA 278
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 64/330 (19%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
S ++V N+++ +Y CG + A ++FD+M + DLV+WNS++ + ++G + AL
Sbjct: 19 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK---DLVAWNSVINGFAENGKPEEALA 75
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ EM I+ D ++V++L A A +G+ GK+VH + ++ GL ++ N L+D
Sbjct: 76 LYT---EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 132
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+YA+CG + EA +F+ M K+ VSW +++ G
Sbjct: 133 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG---------------------------- 164
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKETHCYT 261
A G G EA+ +F+ M+S P E+T V +L C +HC
Sbjct: 165 -------LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC-----------SHCGM 206
Query: 262 IKCILNYDRCDQDELLV------INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+K Y R ++E + ++D+ + + A S+ P NVV W +
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM-PMQPNVVIWRTL 265
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+G HG+++ L F+++ Q ++PN
Sbjct: 266 LGACTVHGDSD--LAEFARI--QILQLEPN 291
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
+A +R G IH+ V+R+ + S ++YV N L+ Y+ GD+ A VFD M K+ V+W S
Sbjct: 1 MADVRLGETIHSVVIRSGFGS-LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 59
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I G+ +G+ EEA+ ++ EM +G+ PDG T + +L AC+ G + G + M K
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-V 118
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G+ ++DL R GR+++A L + M K V W +L+ G
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVG 164
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/664 (34%), Positives = 361/664 (54%), Gaps = 107/664 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF----------------------- 59
++ +F+ N ++ Y +CG+L+ RQ+FD+M + I+
Sbjct: 51 FSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFR 110
Query: 60 -----DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS 114
D +WNSMV+ + Q + AL F M + V L+ S +VL A + +
Sbjct: 111 SMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV---LNEYSFASVLSACSGLND 167
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
G QVH +S DV++G++LVDMY+KC
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC--------------------------- 200
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
G +A +F++M + N VVSW+++I + Q G EAL+VF+ M +P+
Sbjct: 201 ----GNVNDAQRVFDEMGDRN----VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
EVTL S++S CAS+ A+ G+E H +K D+ D +++ NA +DMY KC I
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVK----NDKLRND-IILSNAFVDMYAKCSRIKE 307
Query: 295 ARAIFDSVAPK-----------------------------DRNVVTWTAMIGGYAQHGEA 325
AR IFDS+ + +RNVV+W A+I GY Q+GE
Sbjct: 308 ARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY-----DSD 380
++L LF +LK++ SV P ++ + L ACA LA L G + H +VL++ + + D
Sbjct: 368 EEALSLFC-LLKRE-SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
++V N LID Y K G ++ +VF M ++ VSW ++I G+ +G G EA+++F EM
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
+ G PD IT + +L AC H+G V+EG YFS M++++GV P +HY CMVDLLGRAG L
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
++A +IE MPM+P V+W +LL+ C+ H N+ LG++ A KLLE+E N G Y LLSN+Y
Sbjct: 546 EEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
A +W+DV +R M+ G+ K+PGCSW++ + F V D++HP+ ++++++L LI
Sbjct: 606 AELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILI 665
Query: 621 QRIK 624
++
Sbjct: 666 AEMR 669
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 234/449 (52%), Gaps = 63/449 (14%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
+ VH ++SG ++F+ N L+D Y+KCG + + +VF++M ++++ +WN++VTG + +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
G + A +LF M E D +W+++++G+AQ EAL F M NE +
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
S+LS C+ + + G + H K D + + +A++DMY+KC +++ A+ +
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSD------VYIGSALVDMYSKCGNVNDAQRV 209
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
FD + DRNVV+W ++I + Q+G A ++L++F ML + V+P+ T++ + ACA
Sbjct: 210 FDEMG--DRNVVSWNSLITCFEQNGPAVEALDVFQMML--ESRVEPDEVTLASVISACAS 265
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK--------- 409
L+A++ G+E+H V++N + + ++N +D Y+K I AR +FD+M
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 410 ----------------------HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
+N VSW +LI GY +G+ EEA+ +F +++E + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 448 GITFLVMLYACS-----HSGM------VDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+F +L AC+ H GM + G K+ S +E + G ++D+ +
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS--GEEDDIFVGNS----LIDMYVK 439
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G +++ + M M+ V W A++ G
Sbjct: 440 CGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 342/580 (58%), Gaps = 14/580 (2%)
Query: 143 MYAKCGMMHEASKVFERMQKKDV--VSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ +KC + E ++ K + VS+ A + + E++++ + E E D+
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V ++++ GY++ E ++F ++ P+ T SLL CA AL G++ HC
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
++K L+ D + V +I+MYT+C+ + AR +FD + + VV + AMI GYA
Sbjct: 155 SMKLGLD------DNVYVCPTLINMYTECEDVDSARCVFDRIV--EPCVVCYNAMITGYA 206
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
+ N++L LF +M Q + +KPN T+ L +CA L +L G+ IH Y ++ +
Sbjct: 207 RRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF-CK 263
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
+ V LID ++K G +D A +F+ M++K+ +W+++I Y HG+ E+++ +FE MR
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
E + PD ITFL +L ACSH+G V+EG KYFS M ++G++P +HY MVDLL RAG L
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
+ A + I+ +P+ P ++W LL+ C H N+ L E + ++ EL+ + G Y +LSN+Y
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 443
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
A ++W+ V +R +MK K PGCS ++ FF GD + +++ L E++
Sbjct: 444 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 503
Query: 621 QRIKVLGYVPETSFALH-DVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVC 679
+ +K+ GYVP+TS +H +++D+EK L HSEKLA+ +G+L + PG IR+ KNLRVC
Sbjct: 504 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 563
Query: 680 GDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCH A IS+I +++LRD RFHHF++G CSC ++W
Sbjct: 564 RDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 192/400 (48%), Gaps = 52/400 (13%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
++ +AR +F+ M + D+V +NSM Y + + LF E+++ I D
Sbjct: 77 SSMSYARHLFEAMSEP---DIVIFNSMARGYSRFTNPLEVFSLF---VEILEDGILPDNY 130
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+ ++L A A + G+Q+H +++ GL ++V+V +L++MY +C + A VF+R+
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
+ VV +NAM+TGY+ AL+LF
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLF-------------------------------- 218
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
R+MQ + KPNE+TL+S+LS CA +G+L GK H Y K + C + V
Sbjct: 219 ---REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK----HSFCKY--VKVNT 269
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
A+IDM+ KC S+ A +IF+ + KD W+AMI YA HG+A S+ +F +M +
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQ--AWSAMIVAYANHGKAEKSMLMFERM--RSE 325
Query: 341 SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDV 400
+V+P+ T L AC+ + GR+ + ++ + ++D S++G+++
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 401 ARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
A D + + W L+ H + A KV E +
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 119/206 (57%), Gaps = 6/206 (2%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ NV+VC ++ MY C +D AR +FD + + + V +N+M+ Y + AL
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV---VCYNAMITGYARRNRPNEALS 216
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+ EM ++ + ++L++VL + A +GS GK +H +A + + V V +L+D
Sbjct: 217 LFR---EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
M+AKCG + +A +FE+M+ KD +W+AM+ Y++ G E ++ +FE+MR EN++ D ++
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQS 228
+ ++ + G E F QM S
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVS 359
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/608 (36%), Positives = 353/608 (58%), Gaps = 53/608 (8%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N++++MY +CG D A ++F M ++ D V+WN M++ YVQSG + +L F +EM
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRA---DTVTWNCMISGYVQSGLMEESLTFF---YEM 331
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ + DA++ ++LP+ + + + KQ+H + +R + D+F+ ++L+D Y KC +
Sbjct: 332 ISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
A +F + DVV + AM I+GY
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAM-----------------------------------ISGY 416
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
GL ++L +FR + PNE+TLVS+L + AL G+E H + IK + +R
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD-NR 475
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
C+ + A+IDMY KC +++A IF+ ++ +D +V+W +MI AQ + +++
Sbjct: 476 CN-----IGCAVIDMYAKCGRMNLAYEIFERLSKRD--IVSWNSMITRCAQSDNPSAAID 528
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
+F QM + + +IS +L ACA L + G+ IH +++++ SDV Y + LID
Sbjct: 529 IFRQM--GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV-YSESTLID 585
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGI 449
Y+K G++ A VF MK KN VSW S+I G HG+ ++++ +F EM K G+ PD I
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Query: 450 TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
TFL ++ +C H G VDEG+++F M+++YG+ P +EHYAC+VDL GRAGRL +A + ++
Sbjct: 646 TFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705
Query: 510 MPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDV 569
MP P VW LL CR H+NV+L E A++KL++L+ N G Y L+SN +ANAR W+ V
Sbjct: 706 MPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESV 765
Query: 570 TRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYV 629
T++RSLMK ++K PG SW++ K T F GD HP+S +Y++L L+ +++ GY+
Sbjct: 766 TKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYI 825
Query: 630 PETSFALH 637
P+ LH
Sbjct: 826 PQPYLPLH 833
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 247/511 (48%), Gaps = 54/511 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ N FV ++++ Y G +D ++FD + + D V WN M+ Y + G S +
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK---DCVIWNVMLNGYAKCGALDSVIK 225
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F M +D I +AV+ VL AS G Q+HG V SG+ + + NSL+
Sbjct: 226 GFSVM--RMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG +ASK+F M + D V+WN M++GY G+ E +LT F +M + D ++
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+S+++ ++ F ++ C K+ HCY +
Sbjct: 343 FSSLLPSVSK----------FENLEYC-------------------------KQIHCYIM 367
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ ++ D + + +A+ID Y KC+ +S+A+ IF D VV +TAMI GY +
Sbjct: 368 RHSISLD------IFLTSALIDAYFKCRGVSMAQNIFSQCNSVD--VVVFTAMISGYLHN 419
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G DSLE+F ++K + PN T+ L L AL+ GRE+H ++++ +D+
Sbjct: 420 GLYIDSLEMFRWLVKV--KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC- 476
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ +ID Y+K G +++A +F+ + ++ VSW S+IT A+ +F +M
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G+ D ++ L AC++ G M K + + + ++D+ + G L
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKA 595
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVK 533
AM + + M K V W ++++ C H +K
Sbjct: 596 AMNVFKTMKEK-NIVSWNSIIAACGNHGKLK 625
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 119/201 (59%), Gaps = 10/201 (4%)
Query: 30 CN---AVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
CN AV+ MY +CG ++ A ++F+ + K D+VSWNSM+ QS + +A+ +F++
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKR---DIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M I D VS+ L A A++ S FGK +HGF ++ L DV+ ++L+DMYAK
Sbjct: 533 MGVS---GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN-IELDVVSWST 205
CG + A VF+ M++K++VSWN+++ + G +++L LF +M E++ I D +++
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 206 VIAGYAQKGLGYEALNVFRQM 226
+I+ G E + FR M
Sbjct: 650 IISSCCHVGDVDEGVRFFRSM 670
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 155/342 (45%), Gaps = 44/342 (12%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GKQVH F + + + D + ++ MYA CG + K+F R+
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD---------------- 97
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+R +I W+++I+ + + GL +AL + +M P+ T
Sbjct: 98 -------------LRRSSIR----PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L+ C ++ G + T+ L D C++ V +++I Y + I V
Sbjct: 141 FPCLVKACVALKNF-KGIDFLSDTVSS-LGMD-CNE---FVASSLIKAYLEYGKIDVPSK 194
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD V KD V W M+ GYA+ G + ++ FS M + D+ + PNA T C L CA
Sbjct: 195 LFDRVLQKD--CVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQ-ISPNAVTFDCVLSVCA 250
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
+ G ++H V+ + D + + N L+ YSK G D A +F M + V+W
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEG-SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS 459
+I+GY G EE++ F EM G+LPD ITF +L + S
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P ++L LL C++ L GK+ H + I ++ D + I+ MY C S
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDER------ILGMYAMCGSF 86
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
S +F + + ++ W ++I + ++G N +L + +ML V P+ T C
Sbjct: 87 SDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLC--FGVSPDVSTFPCL 144
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
+ AC L + + V D + +VA+ LI Y + G IDV +FD + K+
Sbjct: 145 VKACVALKNFKGIDFLSDTVSSLGMDCNE-FVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
V W ++ GY G + +K F MR + + P+ +TF +L C+ ++D G++
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 473 CMSKEYGVIPGEEHYA----CMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ V+ G + ++ + + GR D A KL M + V W ++SG
Sbjct: 264 LV-----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI-DVARVVFD- 406
+S L AC+ LR G+++HA+++ N D Y ++ Y+ G D ++ +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDS-YTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 407 NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
+++ + W S+I+ + +G +A+ + +M G+ PD TF ++ AC +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-K 155
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
GI + S G+ E + ++ G++D KL + + ++ V+W +L+G
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGY 214
Query: 527 RK 528
K
Sbjct: 215 AK 216
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 346/605 (57%), Gaps = 19/605 (3%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDM---YAKCGMMHEASKVFERMQKKDVVSWNAMVTGY 175
KQ+H +++GL +D + + + A VF+ + D WN M+ G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
S E +L L+++M + + ++ +++ + E + Q+ + +
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
+ SL++ A G K H L +DR + + + N++I Y K + +A
Sbjct: 151 YAVNSLINSYAVTGNF---KLAH-------LLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 296 RAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
+F +A ++N ++WT MI GY Q ++L+LF +M Q+ V+P+ +++ +L A
Sbjct: 201 LTLFRKMA--EKNAISWTTMISGYVQADMNKEALQLFHEM--QNSDVEPDNVSLANALSA 256
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA+L AL G+ IH+Y+ + + D + + LID Y+K G+++ A VF N+K K+ +
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 315
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
WT+LI+GY HG G EA+ F EM+K G+ P+ ITF +L ACS++G+V+EG F M
Sbjct: 316 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
++Y + P EHY C+VDLLGRAG LD+A + I+ MP+KP V+W ALL CR H+N++LG
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
E L+ ++ + G Y +NI+A ++W R LMK G+ K PGCS + +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 495
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHD-VDDEEKGDLLFDHSEK 654
T F GDR+HP+ E++ + + ++++ GYVPE L D VDD+E+ ++ HSEK
Sbjct: 496 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 555
Query: 655 LALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCS 714
LA+ YG++ + PG IRI KNLRVC DCH IS I + +I++RD +RFHHF++G CS
Sbjct: 556 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 615
Query: 715 CRNYW 719
C +YW
Sbjct: 616 CGDYW 620
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 206/393 (52%), Gaps = 24/393 (6%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
L +A+ +FD + + F WN M+ + S + + +L L+Q+M + +A +
Sbjct: 65 LPYAQIVFDGFDRPDTF---LWNLMIRGFSCSDEPERSLLLYQRM---LCSSAPHNAYTF 118
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
++L A +++ ++ Q+H + G DV+ NSL++ YA G A +F+R+ +
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
D VSWN+++ GY G + ALTLF +M E+N +SW+T+I+GY Q + EAL +
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN----AISWTTMISGYVQADMNKEALQL 234
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
F +MQ+ +P+ V+L + LS CA +GAL GK H Y LN R D +L +
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY-----LNKTRIRMDSVLGC-VL 288
Query: 283 IDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
IDMY KC + A +F ++ K ++V WTA+I GYA HG +++ F +M Q +
Sbjct: 289 IDMYAKCGEMEEALEVFKNI--KKKSVQAWTALISGYAYHGHGREAISKFMEM--QKMGI 344
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR 402
KPN T + L AC+ + G+ I + R+ + C++D ++G +D A+
Sbjct: 345 KPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 403 VVFDNMKHK-NAVSWTSLITGYGMHGQ---GEE 431
M K NAV W +L+ +H GEE
Sbjct: 405 RFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 118/197 (59%), Gaps = 6/197 (3%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N+V+ Y + G +D A +F +M + + +SW +M++ YVQ+ K AL LF EM
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEK---NAISWTTMISGYVQADMNKEALQLFH---EM 238
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ D++ D VSL N L A A +G+ GK +H + ++ + D +G L+DMYAKCG M
Sbjct: 239 QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEM 298
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
EA +VF+ ++KK V +W A+++GY++ G A++ F +M++ I+ +V++++ V+
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 211 AQKGLGYEALNVFRQMQ 227
+ GL E +F M+
Sbjct: 359 SYTGLVEEGKLIFYSME 375
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 329/550 (59%), Gaps = 13/550 (2%)
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
++T +S + A +F+ + + ++ + V W+ + GY++ G +AL V+ M
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKV-WAAMAIGYSRNGSPRDALIVYVDMLCSF 231
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
+P ++ L C + L G+ H +K ++ DQ +V N ++ +Y +
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVK---RKEKVDQ---VVYNVLLKLYMESG 285
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
AR +FD ++ +RNVVTW ++I ++ ++ LF +M Q+ + + T++
Sbjct: 286 LFDDARKVFDGMS--ERNVVTWNSLISVLSKKVRVHEMFNLFRKM--QEEMIGFSWATLT 341
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
L AC+R+AAL +G+EIHA +L+++ DV + N L+D Y K G+++ +R VFD M
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLL-NSLMDMYGKCGEVEYSRRVFDVMLT 400
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
K+ SW ++ Y ++G EE + +FE M + G+ PDGITF+ +L CS +G+ + G+
Sbjct: 401 KDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSL 460
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
F M E+ V P EHYAC+VD+LGRAG++ +A+K+IE MP KP +W +LL+ CR H
Sbjct: 461 FERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Query: 531 NVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
NV +GE AA +L LE N G+Y ++SNIYA+A+ W +V +IR +MK G+KK GCSWV
Sbjct: 521 NVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
Query: 591 QGKKGTATFFVGDRTHPQSERMY-AILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLF 649
Q K F G ++ Y + TEL + I+ GY P TS LHDVD+E K + +
Sbjct: 581 QVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVC 640
Query: 650 DHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFK 709
HSE+LA Y ++ + G PIRITKNLRVC DCH+ + +S + + I+LRD+ RFHHF
Sbjct: 641 GHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFV 700
Query: 710 NGSCSCRNYW 719
+G CSC++YW
Sbjct: 701 DGICSCKDYW 710
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 52/416 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N + + ++T++ C LD AR++FD++ S + W +M Y ++G + AL
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
++ +M+ I+ S+ L A + G+ +H V+ D V N L+
Sbjct: 223 VYV---DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLK 279
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+Y + G+ +A KVF+ M +++VV+WN++++ S LF +M+EE I S
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF---S 336
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ TL ++L C+ V AL+ GKE H +
Sbjct: 337 WA--------------------------------TLTTILPACSRVAALLTGKEIHAQIL 364
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K ++ ++ ++N+++DMY KC + +R +FD + KD + +W M+ YA +
Sbjct: 365 KS------KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD--LASWNIMLNCYAIN 416
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G + + LF M+ + V P+ T L C+ G + + S L
Sbjct: 417 GNIEEVINLFEWMI--ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQ---GEEAVK 434
CL+D ++G I A V + M K + S W SL+ +HG GE A K
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/624 (35%), Positives = 352/624 (56%), Gaps = 46/624 (7%)
Query: 97 LDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKV 156
LDA ++ +++ A S S + +H V+S + F+G+ LV Y + G A K+
Sbjct: 30 LDA-NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKL 88
Query: 157 FERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLG 216
F+ M ++D+VSWN++++GYS G + +M +
Sbjct: 89 FDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGF------------------ 130
Query: 217 YEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL 276
+PNEVT +S++S C G+ G+ H +K + +E+
Sbjct: 131 ---------------RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV------LEEV 169
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
V+NA I+ Y K ++ + +F+ ++ K N+V+W MI + Q+G A L F+ +
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIK--NLVSWNTMIVIHLQNGLAEKGLAYFN--M 225
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+ +P+ T L +C + +R + IH ++ + + + L+D YSK G
Sbjct: 226 SRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC-ITTALLDLYSKLG 284
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
++ + VF + ++++WT+++ Y HG G +A+K FE M G+ PD +TF +L
Sbjct: 285 RLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLN 344
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
ACSHSG+V+EG YF MSK Y + P +HY+CMVDLLGR+G L A LI+ MPM+P
Sbjct: 345 ACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSS 404
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
VW ALL CR +++ +LG AA +L ELE + +Y +LSNIY+ + WKD +RIR+LM
Sbjct: 405 GVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLM 464
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV-LGYVPETSFA 635
K G+ + GCS+++ F VGD +HP+SE++ L E+ +++K +GY +T F
Sbjct: 465 KQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFV 524
Query: 636 LHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQH 695
LHDV ++ K +++ HSEK+A+A+G+L +P EPI I KNLR+CGDCH IS+I +
Sbjct: 525 LHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKR 584
Query: 696 EIILRDSSRFHHFKNGSCSCRNYW 719
II+RDS RFHHF +GSCSC +YW
Sbjct: 585 RIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 195/438 (44%), Gaps = 53/438 (12%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
F+ + +V Y R G A ++FDEM + DLVSWNS+++ Y G + +M
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPER---DLVSWNSLISGYSGRGYLGKCFEVLSRM 123
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
+ +V + + V+ ++++ A GS G+ +HG ++ G+ E+V V N+ ++ Y K
Sbjct: 124 M-ISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT 182
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G + + K+FE + K++VSWN M+ + G+ E L F R
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRR-------------- 228
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
+G+E P++ T +++L C +G + + H + +
Sbjct: 229 -------VGHE--------------PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
++C + A++D+Y+K + + +F + D + WTAM+ YA HG D
Sbjct: 268 GNKC------ITTALLDLYSKLGRLEDSSTVFHEITSPDS--MAWTAMLAAYATHGFGRD 319
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+++ F M+ + P+ T + L AC+ + G+ + + L +C
Sbjct: 320 AIKHFELMVHY--GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC 377
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
++D +SG + A + M + + W +L+ ++ + K E + + L P
Sbjct: 378 MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE--LEP 435
Query: 447 -DGITFLVMLYACSHSGM 463
DG ++++ S SG+
Sbjct: 436 RDGRNYVMLSNIYSASGL 453
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V V NA + YG+ G L + ++F+++ I +LVSWN+M+ ++Q+G + L F
Sbjct: 169 VKVVNAFINWYGKTGDLTSSCKLFEDL---SIKNLVSWNTMIVIHLQNGLAEKGLAYFNM 225
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
V + D + + VL + MG + +HG + G + + +L+D+Y+K
Sbjct: 226 SRR---VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSK 282
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G + ++S VF + D ++W AM+ Y+ G +A+ FE M I D V+++ +
Sbjct: 283 LGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHL 342
Query: 207 IAGYAQKGLGYEALNVFRQM 226
+ + GL E + F M
Sbjct: 343 LNACSHSGLVEEGKHYFETM 362
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/701 (32%), Positives = 375/701 (53%), Gaps = 64/701 (9%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ N +V + N V+ MY C +L+ A ++FDEM SE+ + VS +M++AY + G A+
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEM--SEL-NAVSRTTMISAYAEQGILDKAV 169
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
GLF M D + + +L + + + FG+Q+H +R+GL + + +V
Sbjct: 170 GLFSGMLASGD---KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIV 226
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+MY KCG + A +VF++M K V+ ++ GY+
Sbjct: 227 NMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYT------------------------- 261
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
Q G +AL +F + + + + +L CAS+ L GK+ H
Sbjct: 262 ----------QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K L + E+ V ++D Y KC S A F + ++ N V+W+A+I GY Q
Sbjct: 312 AKLGL------ESEVSVGTPLVDFYIKCSSFESACRAFQEI--REPNDVSWSAIISGYCQ 363
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ ++++ F + ++ S+ N+FT + AC+ LA G ++HA ++
Sbjct: 364 MSQFEEAVKTFKSLRSKNASIL-NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
Y + LI YSK G +D A VF++M + + V+WT+ I+G+ +G EA+++FE+M
Sbjct: 423 -YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ P+ +TF+ +L ACSH+G+V++G M ++Y V P +HY CM+D+ R+G LD
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A+K ++ MP +P + W LSGC H+N++LGE A +L +L+ E+ Y L N+Y
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
A +W++ + LM +KK CSW+Q K F VGD+ HPQ++ +Y L E
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD- 660
Query: 622 RIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILT---SAPGEPIRITKNLRV 678
G++ F + + E+ L DHSE+LA+A+G+++ +AP PI++ KNLR
Sbjct: 661 -----GFMEGDMFQCNMTERREQ---LLDHSERLAIAFGLISVHGNAPA-PIKVFKNLRA 711
Query: 679 CGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
C DCH ++S++ HEI++RDS RFHHFK G CSC +YW
Sbjct: 712 CPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 64/335 (19%)
Query: 17 CLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD 76
C+ L S V V +V Y +C + + A + F E+ + + VSW+++++ Y Q
Sbjct: 310 CVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREP---NDVSWSAIISGYCQMSQ 366
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
+ A+ F+ + + I L++ + ++ A + + G QVH A++ L +
Sbjct: 367 FEEAVKTFKSL-RSKNASI-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
++L+ MY+KCG + +A++VFE M D+V+W A ++G+++ G AL LFE
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE------- 477
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
+M SC KPN VT +++L+ C+ G + GK
Sbjct: 478 ----------------------------KMVSCGMKPNSVTFIAVLTACSHAGLVEQGK- 508
Query: 257 THC-------YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNV 309
HC Y + +++ C +ID+Y + + A ++ P + +
Sbjct: 509 -HCLDTMLRKYNVAPTIDHYDC----------MIDIYARSGLLDEALKFMKNM-PFEPDA 556
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
++W + G H +LEL ++ R + P
Sbjct: 557 MSWKCFLSGCWTH----KNLELGEIAGEELRQLDP 587
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/694 (33%), Positives = 371/694 (53%), Gaps = 51/694 (7%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+ + N+++ +Y +C AR++FD M + + VSW +M+ Y SG L LF+
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNV---VSWCAMMKGYQNSGFDFEVLKLFK 124
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
M+ + + + V + ++ G GKQ HG ++ GL FV N+LV MY+
Sbjct: 125 SMF--FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS 182
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
C EA +V + + Y + +F +AL+
Sbjct: 183 LCSGNGEAIRVLDDLP-------------YCDLSVFSSALS------------------- 210
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
GY + G E L+V R+ + N +T +S L +++ L + H ++
Sbjct: 211 ---GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
N E+ A+I+MY KC + A+ +FD + N+ T ++ Y Q
Sbjct: 268 FN------AEVEACGALINMYGKCGKVLYAQRVFDDTHAQ--NIFLNTTIMDAYFQDKSF 319
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
++L LFS+M + V PN +T + L + A L+ L+ G +H VL++ Y + V+ V
Sbjct: 320 EEALNLFSKM--DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM-VG 376
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
N L++ Y+KSG I+ AR F M ++ V+W ++I+G HG G EA++ F+ M G +
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+ ITF+ +L ACSH G V++G+ YF+ + K++ V P +HY C+V LL +AG A
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
+ P++ V W LL+ C N +LG+ A +E + G Y LLSNI+A +R
Sbjct: 497 FMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSRE 556
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
W+ V ++RSLM + G+KK PG SW+ + T F D HP+ +YA + E++ +IK
Sbjct: 557 WEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKP 616
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
LGY P+ + A HDVD+E++ D L HSEKLA+AYG++ + P+ +TKN+R+C DCH+A
Sbjct: 617 LGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSA 676
Query: 686 ISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
I IS I + I++RDS+RFHHF +G CSC +YW
Sbjct: 677 IKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 354/642 (55%), Gaps = 78/642 (12%)
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
Q+H ++SG D ++ A + H +D+ Y+H
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHH-----------RDL--------DYAH-- 79
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQ--KGLGYEALNVFRQMQSCH-SKPNEV 236
+F QM + N SW+T+I G+++ + A+ +F +M S +PN
Sbjct: 80 ------KIFNQMPQRN----CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIK--------------------------------- 263
T S+L CA G + GK+ H +K
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 264 -----CILNYDRCDQD-ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
++ DR +D E+++ N +ID Y + AR +FD + + R+VV+W MI
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM--RQRSVVSWNTMIS 247
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
GY+ +G D++E+F +M K D ++PN T+ L A +RL +L G +H Y +
Sbjct: 248 GYSLNGFFKDAVEVFREMKKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE 437
D + + + LID YSK G I+ A VF+ + +N ++W+++I G+ +HGQ +A+ F
Sbjct: 306 RIDDV-LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
+MR+ G+ P + ++ +L ACSH G+V+EG +YFS M G+ P EHY CMVDLLGR+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLS 557
G LD+A + I MP+KP V+W ALL CR NV++G+ AN L+++ + G+Y LS
Sbjct: 425 GLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALS 484
Query: 558 NIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILT 617
N+YA+ W +V+ +R MK I+K PGCS + F V D +HP+++ + ++L
Sbjct: 485 NMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLV 544
Query: 618 ELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLR 677
E+ ++++ GY P T+ L ++++E+K ++L HSEK+A A+G+++++PG+PIRI KNLR
Sbjct: 545 EISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLR 604
Query: 678 VCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+C DCH++I IS + + +I +RD RFHHF++GSCSC +YW
Sbjct: 605 ICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 218/410 (53%), Gaps = 36/410 (8%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKS--ALGLFQKMWEMVDVDIQLDAV 100
LD+A ++F++M + F SWN+++ + +S + K+ A+ LF +M M D ++ +
Sbjct: 75 LDYAHKIFNQMPQRNCF---SWNTIIRGFSESDEDKALIAITLFYEM--MSDEFVEPNRF 129
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF--- 157
+ +VL A A G GKQ+HG A++ G D FV ++LV MY CG M +A +F
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 158 -----------ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
R + ++V WN M+ GY +G + A LF++MR+ + VVSW+T+
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTM 245
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
I+GY+ G +A+ VFR+M+ +PN VTLVS+L + +G+L G+ H Y +
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
D ++ +A+IDMY+KC I A +F+ + P++ NV+TW+AMI G+A HG+A
Sbjct: 306 RIDD------VLGSALIDMYSKCGIIEKAIHVFERL-PRE-NVITWSAMINGFAIHGQAG 357
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
D+++ F +M + V+P+ L AC+ + GR + ++ +
Sbjct: 358 DAIDCFCKM--RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKV 435
C++D +SG +D A NM K + V W +L+ M G E +V
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 123/205 (60%), Gaps = 6/205 (2%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ + + N ++ Y R G AR +FD+M + + VSWN+M++ Y +G K A+ +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV---VSWNTMISGYSLNGFFKDAVEV 261
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+ EM DI+ + V+LV+VLPA + +GS G+ +H +A SG+ D +G++L+DM
Sbjct: 262 FR---EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+KCG++ +A VFER+ +++V++W+AM+ G++ G +A+ F +MR+ + V++
Sbjct: 319 YSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 204 STVIAGYAQKGLGYEALNVFRQMQS 228
++ + GL E F QM S
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVS 403
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/639 (35%), Positives = 341/639 (53%), Gaps = 85/639 (13%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE--ASKVFERMQKKDVVSWNAMVTGYS 176
KQ+HG +R GL + ++ L+ K G+ + A +V E +Q ++ W A++ GY+
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
G F+ A+ ++ MR+E I P
Sbjct: 126 IEGKFDEAIAMYGCMRKEEI-----------------------------------TPVSF 150
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIK----CILNYDRCDQDELLVINAIIDMYTKCKSI 292
T +LL C ++ L G++ H T + C + V N +IDMY KC+SI
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF----------VYVGNTMIDMYVKCESI 200
Query: 293 SVARAIFDSVAPKD-----------------------------RNVVTWTAMIGGYAQHG 323
AR +FD + +D +++V WTAM+ G+AQ+
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNA 260
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-SDVL 382
+ ++LE F +M K ++ + T++ + ACA+L A + ++ Y SD +
Sbjct: 261 KPQEALEYFDRMEKS--GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHV 318
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RK 441
+ + LID YSK G+++ A VF +M +KN +++S+I G HG+ +EA+ +F M +
Sbjct: 319 VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQ 378
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
+ P+ +TF+ L ACSHSG+VD+G + F M + +GV P +HY CMVDLLGR GRL
Sbjct: 379 TEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQ 438
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A++LI+ M ++P VW ALL CR H N ++ E AA L ELE + G+Y LLSN+YA
Sbjct: 439 EALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYA 498
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTA-TFFVGDRTHPQSERMYAILTELI 620
+A W V R+R L+K G+KK P SWV K G FF G+ HP S ++ L EL+
Sbjct: 499 SAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELV 558
Query: 621 QRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCG 680
+R+ VLGY P+ S +DV D K +L H+EKLALA+ +LT+ I I KNLR+C
Sbjct: 559 ERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCL 618
Query: 681 DCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCH + S + II+RD+ RFHHF++G CSC ++W
Sbjct: 619 DCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 193/395 (48%), Gaps = 21/395 (5%)
Query: 64 WNSMVAAYVQSGDTKSALGLF--QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV 121
W +++ Y G A+ ++ + E+ V A+ L A +M G+Q
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSAL-----LKACGTMKDLNLGRQF 171
Query: 122 HGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
H R F V+VGN+++DMY KC + A KVF+ M ++DV+SW ++ Y+ +G
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
E A LFE + + D+V+W+ ++ G+AQ EAL F +M+ + +EVT+
Sbjct: 232 ECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 242 LSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS 301
+S CA +GA + ++ D +++ +A+IDMY+KC ++ A +F S
Sbjct: 288 ISACAQLGASKYADR----AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS 343
Query: 302 VAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAA 361
+ ++NV T+++MI G A HG A ++L LF M+ Q +KPN T +LMAC+
Sbjct: 344 M--NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTE-IKPNTVTFVGALMACSHSGL 400
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLI 420
+ GR++ + + C++D ++G + A + M + W +L+
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
+H E A E + + L PD I ++L
Sbjct: 461 GACRIHNNPEIAEIAAEHLFE--LEPDIIGNYILL 493
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 34/231 (14%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF--------------------------- 59
V+V N ++ MY +C ++D AR++FDEM + ++
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 60 -DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFG 118
D+V+W +MV + Q+ + AL F +M + I+ D V++ + A A +G+ +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEK---SGIRADEVTVAGYISACAQLGASKYA 300
Query: 119 KQVHGFAVRSGL--FEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
+ A +SG + V +G++L+DMY+KCG + EA VF M K+V ++++M+ G +
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 360
Query: 177 HIGMFENALTLFEQM-REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM 226
G + AL LF M + I+ + V++ + + GL + VF M
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/607 (35%), Positives = 340/607 (56%), Gaps = 56/607 (9%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K++H +R+G E + L++ G M A +VF+ M K + WN
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN--------- 78
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
T+ GY + L +E+L ++++M+ +P+E T
Sbjct: 79 --------------------------TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTY 112
Query: 239 VSLLSGCASVGALIHGKETHCYTIK----CILNYDRCDQDELLVINAIIDMYTKCKSISV 294
++ + +G G H + +K C+ +V ++ MY K +S
Sbjct: 113 PFVVKAISQLGDFSCGFALHAHVVKYGFGCLG----------IVATELVMMYMKFGELSS 162
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
A +F+S+ KD +V W A + Q G + +LE F++M +V+ ++FT+ L
Sbjct: 163 AEFLFESMQVKD--LVAWNAFLAVCVQTGNSAIALEYFNKMCAD--AVQFDSFTVVSMLS 218
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
AC +L +L G EI+ + + D +++ V N +D + K G+ + ARV+F+ MK +N V
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
SW+++I GY M+G EA+ +F M+ EGL P+ +TFL +L ACSH+G+V+EG +YFS M
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Query: 475 --SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
S + + P +EHYACMVDLLGR+G L++A + I+ MP++P +W ALL C H ++
Sbjct: 338 VQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDM 397
Query: 533 KLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQG 592
LG+ A+ L+E + + LLSNIYA A +W V ++RS M+ G KK S V+
Sbjct: 398 ILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEF 457
Query: 593 KKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHS 652
+ F GD++HPQS+ +Y L E++++I+ +GYVP+T HDV+ EEK L HS
Sbjct: 458 EGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHS 517
Query: 653 EKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGS 712
EKLA+A+G++ PG PIR+ KNLR C DCH ++S + EII+RD +RFHHF+NG
Sbjct: 518 EKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGV 577
Query: 713 CSCRNYW 719
CSC+ +W
Sbjct: 578 CSCKEFW 584
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V +V MY + G L A +F+ M ++ DLV+WN+ +A VQ+G++ AL F KM
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESM---QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+Q D+ ++V++L A +GS G++++ A + + ++ V N+ +DM+ KCG
Sbjct: 203 ADA---VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
A +FE M++++VVSW+ M+ GY+ G ALTLF M+ E + + V++ V++
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 209 GYAQKGLGYEALNVFRQMQSCHSK 232
+ GL E F M + K
Sbjct: 320 ACSHAGLVNEGKRYFSLMVQSNDK 343
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 146/348 (41%), Gaps = 76/348 (21%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
G + +ARQ+FDEM+K IF WN++ YV++ +L L++KM D+ ++ D
Sbjct: 57 GDMCYARQVFDEMHKPRIF---LWNTLFKGYVRNQLPFESLLLYKKMR---DLGVRPDEF 110
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+ V+ A + +G + G +H V+ G V LV MY K G + A +FE M
Sbjct: 111 TYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM 170
Query: 161 QKKDVVSWNA-----------------------------------MVTGYSHIGMFENAL 185
Q KD+V+WNA M++ +G E
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
Query: 186 TLFEQMREENIELDVV-------------------------------SWSTVIAGYAQKG 214
++++ R+E I+ +++ SWST+I GYA G
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 215 LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
EAL +F MQ+ +PN VT + +LS C+ G + GK Y + + D+ +
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR---YFSLMVQSNDKNLEP 347
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
++D+ + + A F P + + W A++G A H
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYE-FIKKMPVEPDTGIWGALLGACAVH 394
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ N+ V NA + M+ +CG + AR +F+EM + + VSW++M+ Y +GD++ AL
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV---VSWSTMIVGYAMNGDSREALT 297
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS---GLFEDVFVGNS 139
LF M + ++ + V+ + VL A + G GK+ V+S L
Sbjct: 298 LFTTMQ---NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC 354
Query: 140 LVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMV 172
+VD+ + G++ EA + ++M + D W A++
Sbjct: 355 MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/614 (34%), Positives = 349/614 (56%), Gaps = 37/614 (6%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE------ASKVFERMQKKDVVSWNAMV 172
+Q+H G +D + LV + K + + A+++ +R +K + + N+M+
Sbjct: 23 RQIHAKLYVDGTLKD----DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 173 TGYSHIGMFENALTLFEQ-------MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ 225
+ + E + + + ++ +N ++ + + + GL + + R
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
+ P+ T L+S A +G L C+ + ++ + + A++
Sbjct: 139 FDN---DPHVQT--GLISLYAELGCL-----DSCHKV-----FNSIPCPDFVCRTAMVTA 183
Query: 286 YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+C + AR +F+ + +R+ + W AMI GYAQ GE+ ++L +F M Q VK N
Sbjct: 184 CARCGDVVFARKLFEGMP--ERDPIAWNAMISGYAQVGESREALNVFHLM--QLEGVKVN 239
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
+ L AC +L AL GR H+Y+ RN+ V +A L+D Y+K GD++ A VF
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYIERNKIKITV-RLATTLVDLYAKCGDMEKAMEVF 298
Query: 406 DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVD 465
M+ KN +W+S + G M+G GE+ +++F M+++G+ P+ +TF+ +L CS G VD
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 466 EGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
EG ++F M E+G+ P EHY C+VDL RAGRL+ A+ +I+ MPMKP VW +LL
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 526 CRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRP 585
R ++N++LG A+ K+LELE+ N G+Y LLSNIYA++ W +V+ +R MK G++K+P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 586 GCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKG 645
GCS ++ FFVGD++HP+ ++ A+ ++ +R+++ GY +T+ + D+D+EEK
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKE 538
Query: 646 DLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRF 705
D L HSEK A+A+GI++ PIRI KNLRVCGDCH IS I EII+RD +RF
Sbjct: 539 DALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRF 598
Query: 706 HHFKNGSCSCRNYW 719
HHFK+G CSC +W
Sbjct: 599 HHFKDGHCSCNGFW 612
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 200/399 (50%), Gaps = 21/399 (5%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
LD+A Q+ D K +F L NSM+ A+ +S + + ++++ + D++ D ++
Sbjct: 56 LDYANQILDRSEKPTLFAL---NSMIRAHCKSPVPEKSFDFYRRILSSGN-DLKPDNYTV 111
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
++ A + G QVHG +R G D V L+ +YA+ G + KVF +
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
D V AMVT + G A LFE M E D ++W+ +I+GYAQ G EALNV
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPER----DPIAWNAMISGYAQVGESREALNV 227
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
F MQ K N V ++S+LS C +GAL G+ H Y + + + + +
Sbjct: 228 FHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI------TVRLATTL 281
Query: 283 IDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
+D+Y KC + A +F + +++NV TW++ + G A +G LELFS ++KQD V
Sbjct: 282 VDLYAKCGDMEKAMEVFWGM--EEKNVYTWSSALNGLAMNGFGEKCLELFS-LMKQD-GV 337
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLIDTYSKSGDIDVA 401
PNA T L C+ + + G+ H +RN++ + L CL+D Y+++G ++ A
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA 396
Query: 402 RVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEM 439
+ M K +A W+SL+ M+ E V ++M
Sbjct: 397 VSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKM 435
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 117/202 (57%), Gaps = 7/202 (3%)
Query: 28 FVC-NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
FVC A+VT RCG + AR++F+ M + D ++WN+M++ Y Q G+++ AL +F
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPER---DPIAWNAMISGYAQVGESREALNVFHL 230
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M ++++ V++++VL A +G+ G+ H + R+ + V + +LVD+YAK
Sbjct: 231 MQLE---GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAK 287
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
CG M +A +VF M++K+V +W++ + G + G E L LF M+++ + + V++ +V
Sbjct: 288 CGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSV 347
Query: 207 IAGYAQKGLGYEALNVFRQMQS 228
+ G + G E F M++
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRN 369
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/517 (38%), Positives = 319/517 (61%), Gaps = 10/517 (1%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++T+I GY EAL + +M ++P+ T LL C + ++ GK+ H
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K L D + V N++I+MY +C + ++ A+F+ + K +W++M+ A
Sbjct: 160 KLGLEAD------VFVQNSLINMYGRCGEMELSSAVFEKLESK--TAASWSSMVSARAGM 211
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G ++ L LF M + ++K + +L+ACA AL G IH ++LRN + +++
Sbjct: 212 GMWSECLLLFRGMCSET-NLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V L+D Y K G +D A +F M+ +N ++++++I+G +HG+GE A+++F +M KE
Sbjct: 271 -VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
GL PD + ++ +L ACSHSG+V EG + F+ M KE V P EHY C+VDLLGRAG L++
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A++ I+ +P++ V+W LS CR +N++LG+ AA +LL+L S N G Y L+SN+Y+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQR 622
+ W DV R R+ + G+K+ PG S V+ K T F DR+HP+ + +Y +L ++ +
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 623 IKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDC 682
+K GY P+ + L +VD+EEK + L HS+K+A+A+G+L + PG I+I +NLR+C DC
Sbjct: 510 LKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDC 569
Query: 683 HTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
HT ISMI + EI++RD +RFH FK G+CSC++YW
Sbjct: 570 HTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 179/381 (46%), Gaps = 51/381 (13%)
Query: 42 ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVS 101
++++A +F + FD +N+M+ YV + AL + EM+ + D +
Sbjct: 81 SMNYAASIFRGIDDPCTFD---FNTMIRGYVNVMSFEEALCFYN---EMMQRGNEPDNFT 134
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
+L A + S GKQ+HG + GL DVFV NSL++MY +CG M +S VFE+++
Sbjct: 135 YPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLE 194
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
K SW++MV+ + +GM+ L LF M E
Sbjct: 195 SKTAASWSSMVSARAGMGMWSECLLLFRGMCSET-------------------------- 228
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
+ K E +VS L CA+ GAL G H + ++ I + ++V +
Sbjct: 229 --------NLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELN------IIVQTS 274
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
++DMY KC + A IF + + RN +T++AMI G A HGE +L +FS+M+K+
Sbjct: 275 LVDMYVKCGCLDKALHIFQKM--EKRNNLTYSAMISGLALHGEGESALRMFSKMIKE--G 330
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
++P+ L AC+ ++ GR + A +L+ CL+D ++G ++ A
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 402 RVVFDNMK-HKNAVSWTSLIT 421
++ KN V W + ++
Sbjct: 391 LETIQSIPIEKNDVIWRTFLS 411
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 122/204 (59%), Gaps = 5/204 (2%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++VFV N+++ MYGRCG ++ + +F+++ E SW+SMV+A G L
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKL---ESKTAASWSSMVSARAGMGMWSECLL 219
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+ M + +++ + +V+ L A A+ G+ G +HGF +R+ ++ V SLVD
Sbjct: 220 LFRGMCS--ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVD 277
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + +A +F++M+K++ ++++AM++G + G E+AL +F +M +E +E D V
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 203 WSTVIAGYAQKGLGYEALNVFRQM 226
+ +V+ + GL E VF +M
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEM 361
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/703 (32%), Positives = 380/703 (54%), Gaps = 25/703 (3%)
Query: 23 LNSNVFVCNAVVTMYGR--CGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
LNS VFV N+++++Y + + D ++FDE+ + D+ SWN++V++ V+ G + A
Sbjct: 213 LNS-VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQR---DVASWNTVVSSLVKEGKSHKA 268
Query: 81 LGLFQKMWEMVDVD-IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
LF +EM V+ +D+ +L +L + G+++HG A+R GL +++ V N+
Sbjct: 269 FDLF---YEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNA 325
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+ Y+K M + ++E M +D V++ M+T Y GM ++A+ +F + E+N
Sbjct: 326 LIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN---- 381
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
++++ ++AG+ + G G +AL +F M + + +L S + C V ++ H
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+ IK ++ C Q A++DM T+C+ ++ A +FD + T++IGGY
Sbjct: 442 FCIKFGTAFNPCIQ------TALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGY 495
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
A++G + ++ LF + L + + + + +++ L C L G +IH Y L+ Y S
Sbjct: 496 ARNGLPDKAVSLFHRTLCEQK-LFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS 554
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
D+ + N LI Y+K D D A +F+ M+ + +SW SLI+ Y + G+EA+ ++ M
Sbjct: 555 DI-SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
Query: 440 RKEGLLPDGITFLVMLYAC--SHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
++ + PD IT +++ A + S + F M Y + P EHY V +LG
Sbjct: 614 NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHW 673
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLS 557
G L++A I MP++P V ALL CR H N + + A +L + E Y L S
Sbjct: 674 GLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKS 733
Query: 558 NIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILT 617
NIY+ + W IR M+ G +K P SW+ + +F D +HPQ + +Y L
Sbjct: 734 NIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLE 793
Query: 618 ELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTS-APGEPIRITKNL 676
LI +GY P T + L +VD+ K LF HS KLA+ YGIL+S G+P+R+ KN+
Sbjct: 794 ILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNV 853
Query: 677 RVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
+CGDCH YIS++++ EI+LRDSS FHHF NG CSCR+ W
Sbjct: 854 MLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
+ +HA L+ + + L N LI TY K G A +VF ++ VS+T+LI+G+
Sbjct: 100 KAVHASFLKLREEKTRL--GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 426 HGQGEEAVKVFEEMRKEGLL-PDGITFLVMLYACSHSGMVDEGIK 469
EA+KVF MRK GL+ P+ TF+ +L AC GI+
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 308/520 (59%), Gaps = 13/520 (2%)
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKP-NEVTLVSLLSGCASVGALIHGKETHCYTI 262
+T+I ++ E +FR ++ S P N ++ L C G L+ G + H
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
D D LL + ++D+Y+ C++ + A +FD + PK R+ V+W + Y ++
Sbjct: 141 S-----DGFLSDSLL-MTTLMDLYSTCENSTDACKVFDEI-PK-RDTVSWNVLFSCYLRN 192
Query: 323 GEANDSLELFSQMLKQ-DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
D L LF +M D VKP+ T +L ACA L AL G+++H ++ N S
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL-SGA 251
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
L ++N L+ YS+ G +D A VF M+ +N VSWT+LI+G M+G G+EA++ F EM K
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM-SKEYGVIPGEEHYACMVDLLGRAGRL 500
G+ P+ T +L ACSHSG+V EG+ +F M S E+ + P HY C+VDLLGRA L
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
DKA LI+ M MKP +W LL CR H +V+LGE + L+EL++E G Y LL N Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
+ +W+ VT +RSLMK I +PGCS ++ + F V D +HP+ E +Y +L E+
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEIN 491
Query: 621 QRIKVLGYVPETSFALHDVD-DEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVC 679
Q++K+ GYV E + LH+++ +EEKG L HSEKLA+A+GIL + PG IR+TKNLR C
Sbjct: 492 QQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTC 551
Query: 680 GDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
DCH ++S + +I+RD SRFHHFK GSCSC ++W
Sbjct: 552 VDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 55/319 (17%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+ + ++ +Y C A ++FDE+ K D VSWN + + Y+++ T+ L LF
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKR---DTVSWNVLFSCYLRNKRTRDVLVLF 202
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
KM VD ++ D V+ + L A A++G+ FGKQVH F +GL + + N+LV MY
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
++CG M +A +VF M++++VVSW A+++G
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISG------------------------------ 292
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
A G G EA+ F +M P E TL LLS C+ G + G
Sbjct: 293 -----LAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG---------- 337
Query: 265 ILNYDRCDQDELLV------INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
++ +DR E + ++D+ + + + A ++ S+ K + + W ++G
Sbjct: 338 MMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTI-WRTLLGA 396
Query: 319 YAQHGEANDSLELFSQMLK 337
HG+ + S +++
Sbjct: 397 CRVHGDVELGERVISHLIE 415
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 172/383 (44%), Gaps = 49/383 (12%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N+M+ A+ S LF+ + + + + +S L G G Q+HG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRR--NSSLPANPLSSSFALKCCIKSGDLLGGLQIHGK 138
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
G D + +L+D+Y+ C +A KVF+ + K+D VSWN + + Y +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
L LF++M+ + + C KP+ VT + L
Sbjct: 199 LVLFDKMKND-------------------------------VDGC-VKPDGVTCLLALQA 226
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
CA++GAL GK+ H + + L+ L + N ++ MY++C S+ A +F +
Sbjct: 227 CANLGALDFGKQVHDFIDENGLS------GALNLSNTLVSMYSRCGSMDKAYQVFYGM-- 278
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
++RNVV+WTA+I G A +G +++E F++MLK + P T++ L AC+ +
Sbjct: 279 RERNVVSWTALISGLAMNGFGKEAIEAFNEMLK--FGISPEEQTLTGLLSACSHSGLVAE 336
Query: 365 GREIHAYVLRNQYD-SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITG 422
G + ++ L+ C++D ++ +D A + +M+ K ++ W +L+
Sbjct: 337 GMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGA 396
Query: 423 YGMHGQ---GEEAVKVFEEMRKE 442
+HG GE + E++ E
Sbjct: 397 CRVHGDVELGERVISHLIELKAE 419
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + + N +V+MY RCG++D A Q+F M + + VSW ++++ +G K A+
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV---VSWTALISGLAMNGFGKEAIE 304
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHG-FAVRSGLFEDVFV 136
F EM+ I + +L +L A + G +F + G F ++ L
Sbjct: 305 AFN---EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHH---- 357
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMV 172
+VD+ + ++ +A + + M+ K D W ++
Sbjct: 358 YGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLL 394
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/611 (35%), Positives = 340/611 (55%), Gaps = 49/611 (8%)
Query: 117 FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
F +H ++ G D F N LV Y K ++ A K+F+ M + +VVSW ++++GY+
Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
+G +NAL++F++M E+ PNE
Sbjct: 107 DMGKPQNALSMFQKMHEDR----------------------------------PVPPNEY 132
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
T S+ C+++ GK H L + ++V ++++DMY KC + AR
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRN------IVVSSSLVDMYGKCNDVETAR 186
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+FDS+ RNVV+WT+MI YAQ+ ++++ELF S + N F ++ + AC
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+ L L+ G+ H V R Y+S+ + VA L+D Y+K G + A +F ++ + +S+
Sbjct: 247 SSLGRLQWGKVAHGLVTRGGYESNTV-VATSLLDMYAKCGSLSCAEKIFLRIRCHSVISY 305
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
TS+I HG GE AVK+F+EM + P+ +T L +L+ACSHSG+V+EG++Y S M++
Sbjct: 306 TSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM--KPGQVVWVALLSGCRKHENVKL 534
+YGV+P HY C+VD+LGR GR+D+A +L + + + + G ++W ALLS R H V++
Sbjct: 366 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEI 425
Query: 535 GEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKK 594
A+ +L++ + +Y LSN YA + W+D +R MK +G K CSW++ K
Sbjct: 426 VSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKD 485
Query: 595 GTATFFVGDRTHPQSERMYAILTELIQRIKVLGY------VPETSFALHDVDDEEKGDLL 648
F GD + +S + L +L +R+K G+ + +S DVD+E K +++
Sbjct: 486 SVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMV 545
Query: 649 FDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHF 708
H E+LALAYG+L G IRI NLR+C DCH A IS I++ EI++RD +RFH F
Sbjct: 546 SLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCF 605
Query: 709 KNGSCSCRNYW 719
KNGSC+CR+YW
Sbjct: 606 KNGSCTCRDYW 616
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 201/415 (48%), Gaps = 61/415 (14%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+ F N +V Y + ++ AR++FDEM + ++VSW S+++ Y G ++AL +F
Sbjct: 62 SDTFTVNHLVISYVKLKEINTARKLFDEMCEP---NVVSWTSVISGYNDMGKPQNALSMF 118
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
QKM E D + + + +V A +++ GK +H SGL ++ V +SLVDMY
Sbjct: 119 QKMHE--DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 145 AKCGMMHEASKVFERM--QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
KC + A +VF+ M ++VVSW +M+T
Sbjct: 177 GKCNDVETARRVFDSMIGYGRNVVSWTSMIT----------------------------- 207
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSC--HSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
YAQ G+EA+ +FR + + N+ L S++S C+S+G L GK H
Sbjct: 208 ------AYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGL 261
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+ Y + +V +++DMY KC S+S A IF + + +V+++T+MI A
Sbjct: 262 VTRG--GY----ESNTVVATSLLDMYAKCGSLSCAEKIFLRI--RCHSVISYTSMIMAKA 313
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-- 378
+HG +++LF +M+ + PN T+ L AC+ + G E + ++ +Y
Sbjct: 314 KHGLGEAAVKLFDEMVAG--RINPNYVTLLGVLHACSHSGLVNEGLE-YLSLMAEKYGVV 370
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMK---HKNAVSWTSLITGYGMHGQGE 430
D + C++D + G +D A + ++ + A+ W +L++ +HG+ E
Sbjct: 371 PDSRHY-TCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 2/204 (0%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N+ V +++V MYG+C ++ AR++FD M ++VSW SM+ AY Q+ A+
Sbjct: 162 LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYG-RNVVSWTSMITAYAQNARGHEAIE 220
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+ + D + + L +V+ A +S+G +GK HG R G + V SL+D
Sbjct: 221 LFRSFNAALTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG + A K+F R++ V+S+ +M+ + G+ E A+ LF++M I + V+
Sbjct: 280 MYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVT 339
Query: 203 WSTVIAGYAQKGLGYEALNVFRQM 226
V+ + GL E L M
Sbjct: 340 LLGVLHACSHSGLVNEGLEYLSLM 363
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 343/602 (56%), Gaps = 47/602 (7%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G Q+HG+ V+SGL V N+L++ Y+K + ++ + FE +K +W
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTW--------- 84
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
S++I+ +AQ L + +L ++M + + +P++
Sbjct: 85 --------------------------SSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHV 118
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L S CA + G+ HC ++K YD ++ V ++++DMY KC I AR
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKT--GYDA----DVFVGSSLVDMYAKCGEIVYARK 172
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD + RNVVTW+ M+ GYAQ GE ++L LF + L ++ +V N ++ S + CA
Sbjct: 173 MFDEMP--QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV--NDYSFSSVISVCA 228
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
L GR+IH + +V + L+ YSK G + A VF+ + KN W
Sbjct: 229 NSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWN 287
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
+++ Y H ++ +++F+ M+ G+ P+ ITFL +L ACSH+G+VDEG YF M KE
Sbjct: 288 AMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KE 346
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
+ P ++HYA +VD+LGRAGRL +A+++I MP+ P + VW ALL+ C H+N +L F
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAF 406
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTA 597
AA+K+ EL + G + LSN YA R++D + R L++ G KK G SWV+ +
Sbjct: 407 AADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVH 466
Query: 598 TFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLAL 657
TF G+R H +S+ +Y L EL + ++ GY+ +TS+ L +VD +EK + HSE+LA+
Sbjct: 467 TFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAI 526
Query: 658 AYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRN 717
A+G++T PIR+ KNLRVCGDCH AI ++S+ + II+RD++RFH F++G CSC +
Sbjct: 527 AFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCND 586
Query: 718 YW 719
YW
Sbjct: 587 YW 588
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+++VFV +++V MY +CG + +AR+MFDEM + + V+W+ M+ Y Q G+ + AL L
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNV---VTWSGMMYGYAQMGENEEALWL 204
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+ E + ++ ++ S +V+ A+ G+Q+HG +++S FVG+SLV +
Sbjct: 205 FK---EALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+KCG+ A +VF + K++ WNAM+ Y+ + + LF++M+ ++ + +++
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
V+ + GL E F QM+ +P + SL+ G L E
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 341/620 (55%), Gaps = 65/620 (10%)
Query: 119 KQVHGFAVRSGLFED---VFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGY 175
KQ+H F +R+ E+ +F+ ++ + + ++ A +VF+ ++ WN ++
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 176 SH-IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
+H + E A L+ +M E S P+
Sbjct: 125 AHDVSRKEEAFMLYRKMLERG----------------------------------ESSPD 150
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
+ T +L CA + GK+ HC +K D + V N +I +Y C + +
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD------VYVNNGLIHLYGSCGCLDL 204
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
AR +FD + +R++V+W +MI + GE + +L+LF +M RS +P+ +T+ L
Sbjct: 205 ARKVFDEMP--ERSLVSWNSMIDALVRFGEYDSALQLFREM---QRSFEPDGYTMQSVLS 259
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDV---LYVANCLIDTYSKSGDIDVARVVFDNMKHK 411
ACA L +L G HA++LR + D DV + V N LI+ Y K G + +A VF M+ +
Sbjct: 260 ACAGLGSLSLGTWAHAFLLR-KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 412 NAVSWTSLITGYGMHGQGEEAVKVFEEM--RKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
+ SW ++I G+ HG+ EEA+ F+ M ++E + P+ +TF+ +L AC+H G V++G +
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 470 YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC-RK 528
YF M ++Y + P EHY C+VDL+ RAG + +A+ ++ MPMKP V+W +LL C +K
Sbjct: 379 YFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK 438
Query: 529 HENVKLGEFAANKLLELESEND-------GSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
+V+L E A ++ + +N+ G+Y LLS +YA+A RW DV +R LM GI
Sbjct: 439 GASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGI 498
Query: 582 KKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFA--LHDV 639
+K PGCS ++ + FF GD +HPQ++++Y L + R++ +GY+P+ S A +
Sbjct: 499 RKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDAT 558
Query: 640 DDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIIL 699
+D K L HSE+LA+A+G++ P PIRI KNLRVC DCH IS + EII+
Sbjct: 559 NDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIV 618
Query: 700 RDSSRFHHFKNGSCSCRNYW 719
RD RFHHFK+GSCSC +YW
Sbjct: 619 RDRVRFHHFKDGSCSCLDYW 638
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 54/401 (13%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKS-ALGL 83
+ +F+ ++ + +++A ++FD + F WN+++ A K A L
Sbjct: 81 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSF---MWNTLIRACAHDVSRKEEAFML 137
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
++KM E + D + VL A A + + GKQVH V+ G DV+V N L+ +
Sbjct: 138 YRKMLERGES--SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHL 195
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y CG + A KVF+ M ++ +VSWN+M+ G +++AL LF +M+
Sbjct: 196 YGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--------- 246
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+P+ T+ S+LS CA +G+L G H + ++
Sbjct: 247 ---------------------------FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 264 CILNYDRCDQD---ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+CD D ++LV N++I+MY KC S+ +A +F + + R++ +W AMI G+A
Sbjct: 280 ------KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM--QKRDLASWNAMILGFA 331
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
HG A +++ F +M+ + +V+PN+ T L+AC + GR+ ++R+
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 391
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLI 420
L C++D +++G I A + +M K +AV W SL+
Sbjct: 392 ALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 158/328 (48%), Gaps = 56/328 (17%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V +V+V N ++ +YG CG LD AR++FDEM + LVSWNSM+ A V+ G
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS---LVSWNSMIDALVRFG 231
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS---GLFE 132
+ SAL LF++M + D ++ +VL A A +GS G H F +R +
Sbjct: 232 EYDSALQLFREMQR----SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM- 191
DV V NSL++MY KCG + A +VF+ MQK+D+ SWNAM+ G++ G E A+ F++M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 192 -REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
+ EN+ +PN VT V LL C G
Sbjct: 348 DKRENV-----------------------------------RPNSVTFVGLLIACNHRGF 372
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
+ G++ ++ D C + L I+D+ + I+ A + S+ P + V
Sbjct: 373 VNKGRQYFDMMVR-----DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM-PMKPDAV 426
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQ 338
W +++ + G S+EL ++ +
Sbjct: 427 IWRSLLDACCKKGA---SVELSEEIARN 451
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 338/592 (57%), Gaps = 16/592 (2%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+VT Y + A+ + + S+I + WN ++A+Y ++ + + +++M V
Sbjct: 84 LVTFYSAFNLHNEAQSIIE---NSDILHPLPWNVLIASYAKNELFEEVIAAYKRM---VS 137
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
I+ DA + +VL A FG+ VHG S ++V N+L+ MY + M
Sbjct: 138 KGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGI 197
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A ++F+RM ++D VSWNA++ Y+ GM+ A LF++M +E+ V++W+ + G Q
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
G AL + +M++ + + V ++ L C+ +GA+ GKE H I +YD D
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS--SYDGID 315
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
V N +I MY+KCK + A +F ++ ++ TW ++I GYAQ ++ ++ L
Sbjct: 316 N----VRNTLITMYSKCKDLRHALIVFRQT--EENSLCTWNSIISGYAQLNKSEEASHLL 369
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
+ML +PN+ T++ L CAR+A L+ G+E H Y+LR + D + N L+D Y
Sbjct: 370 REMLVA--GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 393 SKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFL 452
+KSG I A+ V D M ++ V++TSLI GYG G+G A+ +F+EM + G+ PD +T +
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVV 487
Query: 453 VMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM 512
+L ACSHS +V EG + F M EYG+ P +H++CMVDL GRAG L KA +I MP
Sbjct: 488 AVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPY 547
Query: 513 KPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRI 572
KP W LL+ C H N ++G++AA KLLE++ EN G Y L++N+YA A W + +
Sbjct: 548 KPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEV 607
Query: 573 RSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
R++M+ G+KK PGC+W+ G + F VGD + P++ Y +L L Q +K
Sbjct: 608 RTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 221/473 (46%), Gaps = 85/473 (17%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+++VCNA+++MY R + AR++FD M++ D VSWN+++ Y G A LF
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFER---DAVSWNAVINCYASEGMWSEAFELF 233
Query: 85 QKMW--------------------------------EMVDVDIQLDAVSLVNVLPAFASM 112
KMW M + LD V+++ L A + +
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLI 293
Query: 113 GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMV 172
G+ GK++HG A+ S V N+L+ MY+KC + A VF + ++ + +WN+++
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSII 353
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
+GY+ + E A L +M ++AG+ +
Sbjct: 354 SGYAQLNKSEEASHLLREM--------------LVAGF---------------------Q 378
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
PN +TL S+L CA + L HGKE HCY ++ +C +D ++ N+++D+Y K I
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILR-----RKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
A+ + D ++ +D VT+T++I GY GE +L LF +M + +KP+ T+
Sbjct: 434 VAAKQVSDLMSKRDE--VTYTSLIDGYGNQGEGGVALALFKEMTRS--GIKPDHVTVVAV 489
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK- 411
L AC+ + G + + L +C++D Y ++G + A+ + NM +K
Sbjct: 490 LSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKP 549
Query: 412 NAVSWTSLITGYGMHGQ---GEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
+ +W +L+ +HG G+ A + EM+ E P + +YA + S
Sbjct: 550 SGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN--PGYYVLIANMYAAAGS 600
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 16/257 (6%)
Query: 211 AQKGLGYEALNVFR--QMQSCHSKPNEVTL---VSLLSGCASVGALIHGKETHCYTIKCI 265
A G ++A F ++QS + +++ L SLLS C V A + G + H + I
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ Y +L+ + +++ + +SI I + + W +I YA++
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL--------HPLPWNVLIASYAKNELF 125
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+ + + +M+ + ++P+AFT L AC + GR +H + + Y S LYV
Sbjct: 126 EEVIAAYKRMV--SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSS-LYVC 182
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
N LI Y + ++ +AR +FD M ++AVSW ++I Y G EA ++F++M G+
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 446 PDGITFLVMLYACSHSG 462
IT+ ++ C +G
Sbjct: 243 VSVITWNIISGGCLQTG 259
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 312/523 (59%), Gaps = 20/523 (3%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+++VI ++ L + +R+M S + P+ T S++ CA + AL GK HC+ +
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
D V A++ Y+KC + AR +FD + ++++V W +++ G+ Q+
Sbjct: 135 VSGFGLD------TYVQAALVTFYSKCGDMEGARQVFDRM--PEKSIVAWNSLVSGFEQN 186
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G A++++++F QM ++ +P++ T L ACA+ A+ G +H Y++ D +V
Sbjct: 187 GLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNV- 243
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ LI+ YS+ GD+ AR VFD MK N +WT++I+ YG HG G++AV++F +M +
Sbjct: 244 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 443 -GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G +P+ +TF+ +L AC+H+G+V+EG + M+K Y +IPG EH+ CMVD+LGRAG LD
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 363
Query: 502 KAMKLIE-----GMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
+A K I G P +W A+L C+ H N LG A +L+ LE +N G + +L
Sbjct: 364 EAYKFIHQLDATGKATAPA--LWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVML 421
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
SNIYA + + +V+ IR M ++K+ G S ++ + T F +GD +H ++ +Y L
Sbjct: 422 SNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYL 481
Query: 617 TELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNL 676
LI R K +GY P + +H V++EEK L HSEKLA+A+G+L + I I KNL
Sbjct: 482 ETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNL 540
Query: 677 RVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
R+C DCH+A YIS++ +I +RD RFHHF+NGSCSC +YW
Sbjct: 541 RICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 176/384 (45%), Gaps = 55/384 (14%)
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
M+ ++ + +V+ + A + + GK VH AV SG D +V +LV Y+KCG
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 150 MHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAG 209
M A +VF+RM +K +V+WN++V+G+ G+ + A+ +F QMRE E D
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD---------- 207
Query: 210 YAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYD 269
T VSLLS CA GA+ G H Y I L+ +
Sbjct: 208 -------------------------SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 270 RCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSL 329
+ + A+I++Y++C + AR +FD + K+ NV WTAMI Y HG ++
Sbjct: 243 ------VKLGTALINLYSRCGDVGKAREVFDKM--KETNVAAWTAMISAYGTHGYGQQAV 294
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
ELF++M + D PN T L ACA + GR ++ + ++ + C++
Sbjct: 295 ELFNKM-EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMV 353
Query: 390 DTYSKSGDIDVARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
D ++G +D A + K WT+++ MH + V++ + R L
Sbjct: 354 DMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAK--RLIALE 411
Query: 446 PDGITFLVML---YACSHSGMVDE 466
PD VML YA SG DE
Sbjct: 412 PDNPGHHVMLSNIYAL--SGKTDE 433
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 53/316 (16%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+ +V A+VT Y +CG ++ ARQ+FD M + I V+WNS+V+ + Q+G A+ +F
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI---VAWNSLVSGFEQNGLADEAIQVF- 196
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
++M + + D+ + V++L A A G+ G VH + + GL +V +G +L+++Y+
Sbjct: 197 --YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYS 254
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+CG + +A +VF++M++ +V +W AM++ Y G + A+ LF +M ++
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD----------- 303
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE-----THCY 260
C PN VT V++LS CA G + G+ T Y
Sbjct: 304 -----------------------CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSY 340
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+ + + C D L + + Y K I A + AP WTAM+G
Sbjct: 341 RLIPGVEHHVCMVDMLGRAGFLDEAY---KFIHQLDATGKATAP-----ALWTAMLGACK 392
Query: 321 QHGEANDSLELFSQML 336
H + +E+ +++
Sbjct: 393 MHRNYDLGVEIAKRLI 408
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ NV + A++ +Y RCG + AR++FD+M ++ ++ +W +M++AY G + A+
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKET---NVAAWTAMISAYGTHGYGQQAVE 295
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS-GLFEDVFVGNSLV 141
LF KM + D + V+ V VL A A G G+ V+ +S L V +V
Sbjct: 296 LFNKMED--DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMV 353
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVS----WNAMV 172
DM + G + EA K ++ + W AM+
Sbjct: 354 DMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 337/594 (56%), Gaps = 50/594 (8%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N ++ Y +CG + A ++F+ M I +SW ++++ Y Q+ K A+ LF M +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNI---ISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
++ D + ++L + AS+ + FG QVH + +++ L D +V NSL+DMYAKC +
Sbjct: 345 ---GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
+A KVF+ DVV +NAM+ GYS +G W
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLG---------------------TQWEL----- 435
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
+EALN+FR M+ +P+ +T VSLL AS+ +L K+ H K LN D
Sbjct: 436 ------HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD- 488
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+ +A+ID+Y+ C + +R +FD + KD +V W +M GY Q E ++L
Sbjct: 489 -----IFAGSALIDVYSNCYCLKDSRLVFDEMKVKD--LVIWNSMFAGYVQQSENEEALN 541
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
LF ++ Q +P+ FT + + A LA+++ G+E H +L+ + + Y+ N L+D
Sbjct: 542 LFLEL--QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP-YITNALLD 598
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
Y+K G + A FD+ ++ V W S+I+ Y HG+G++A+++ E+M EG+ P+ IT
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658
Query: 451 FLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
F+ +L ACSH+G+V++G+K F M + +G+ P EHY CMV LLGRAGRL+KA +LIE M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Query: 511 PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVT 570
P KP +VW +LLSGC K NV+L E AA + + ++ GS+T+LSNIYA+ W +
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAK 777
Query: 571 RIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
++R MK G+ K PG SW+ K F D++H ++ ++Y +L +L+ +I+
Sbjct: 778 KVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 254/531 (47%), Gaps = 61/531 (11%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
W L + ++ N ++ +Y R G + +AR++F++M + +LVSW++MV+A G + +
Sbjct: 73 WGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER---NLVSWSTMVSACNHHGIYEES 129
Query: 81 LGLFQKMWEM-VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
L +F + W D + S + G W Q+ F V+SG DV+VG
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF-QLQSFLVKSGFDRDVYVGTL 188
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+D Y K G + A VF+ + +K V+W M++G +G +L LF Q+ E+N+
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV--- 245
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
P+ L ++LS C+ + L GK+ H
Sbjct: 246 --------------------------------VPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+ ++ L D ++N +ID Y KC + A +F+ + ++N+++WT ++ GY
Sbjct: 274 HILRYGLEMDAS------LMNVLIDSYVKCGRVIAAHKLFNGMP--NKNIISWTTLLSGY 325
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
Q+ +++ELF+ M K +KP+ + S L +CA L AL G ++HAY ++ +
Sbjct: 326 KQNALHKEAMELFTSMSK--FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY---GMHGQGEEAVKVF 436
D YV N LID Y+K + AR VFD + V + ++I GY G + EA+ +F
Sbjct: 384 DS-YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+MR + P +TF+ +L A + + + M K YG+ + ++D+
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSN 501
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSG-CRKHENVKLGEFAANKLLELE 546
L + + + M +K V+W ++ +G ++ EN E A N LEL+
Sbjct: 502 CYCLKDSRLVFDEMKVKD-LVIWNSMFAGYVQQSEN----EEALNLFLELQ 547
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 225/472 (47%), Gaps = 70/472 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG---DTKS 79
L ++ +V N+++ MY +C L AR++FD + D+V +N+M+ Y + G +
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA---DVVLFNAMIEGYSRLGTQWELHE 437
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
AL +F+ M + I+ ++ V++L A AS+ S KQ+HG + GL D+F G++
Sbjct: 438 ALNIFRDMRFRL---IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+D+Y+ C + ++ VF+ M+ KD+V WN+M GY E AL L
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL------------ 542
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
F ++Q +P+E T ++++ ++ ++ G+E HC
Sbjct: 543 -----------------------FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+K L C+ + NA++DMY KC S A FDS A +D VV W ++I Y
Sbjct: 580 QLLKRGL---ECNP---YITNALLDMYAKCGSPEDAHKAFDSAASRD--VVCWNSVISSY 631
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
A HGE +L++ +M+ + ++PN T L AC+ + G + +LR +
Sbjct: 632 ANHGEGKKALQMLEKMMSE--GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP 689
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN-AVSWTSLITGYGMHGQGEEAVKVFEE 438
+ + C++ ++G ++ AR + + M K A+ W SL++G G V++ E
Sbjct: 690 ETEHYV-CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN----VELAEH 744
Query: 439 MRKEGLLPD-----GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI--PG 483
+ +L D T L +YA GM E K M E GV+ PG
Sbjct: 745 AAEMAILSDPKDSGSFTMLSNIYAS--KGMWTEAKKVRERMKVE-GVVKEPG 793
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 177/339 (52%), Gaps = 50/339 (14%)
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
VHG + GL D ++ N L+++Y++ G M A KVFE+M ++++VSW+ MV+ +H G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
+E +L +F + W T PNE L S
Sbjct: 126 YEESLVVFLEF-----------WRTR-----------------------KDSPNEYILSS 151
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+ C+ + G+ + ++ L D+D + V +ID Y K +I AR +FD
Sbjct: 152 FIQACSGLDG--RGRWM-VFQLQSFLVKSGFDRD-VYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
++ K + VTWT MI G + G + SL+LF Q+++ + V P+ + +S L AC+ L
Sbjct: 208 ALPEK--STVTWTTMISGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILP 263
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
L G++IHA++LR + D + N LID+Y K G + A +F+ M +KN +SWT+L+
Sbjct: 264 FLEGGKQIHAHILRYGLEMDA-SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS 459
+GY + +EA+++F M K GL PD +YACS
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPD-------MYACS 354
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C L+ L N ++ NA++ MY +CG+ + A + FD D+V WNS++++Y G
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR---DVVCWNSVISSYANHG 635
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ K AL + +K M+ I+ + ++ V VL A + G G + +R G+ +
Sbjct: 636 EGKKALQMLEK---MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE 692
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKD-VVSWNAMVTGYSHIGMFENALTLFEQMREE 194
+V + + G +++A ++ E+M K + W ++++G + G E L E E
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE----LAEHAAEM 748
Query: 195 NI---ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
I D S++ + YA KG+ EA V +M+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 357 ARLAALRSGRE-------IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK 409
ARL LR+ + +H ++ + D Y++N LI+ YS++G + AR VF+ M
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDT-YLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEM---RKEGLLPDGITFLVMLYACSHSGMVDE 466
+N VSW+++++ HG EE++ VF E RK+ P+ + AC SG+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS--PNEYILSSFIQAC--SGLDGR 162
Query: 467 GIKYFSCMSKEYGVIPGEEH----YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVAL 522
G ++ + + V G + ++D + G +D A + + +P K V W +
Sbjct: 163 G-RWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTM 220
Query: 523 LSGCRK 528
+SGC K
Sbjct: 221 ISGCVK 226
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/457 (40%), Positives = 291/457 (63%), Gaps = 8/457 (1%)
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
+D +L N++++ Y K I AR +FD + +RNV++W+ +I GY G+ +
Sbjct: 120 FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMP--ERNVISWSCLINGYVMCGKYKE 177
Query: 328 SLELFSQML---KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+L+LF +M + V+PN FT+S L AC RL AL G+ +HAY+ + + D++ +
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIV-L 236
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAV-SWTSLITGYGMHGQGEEAVKVFEEMR-KE 442
LID Y+K G ++ A+ VF+ + K V +++++I M+G +E ++F EM +
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
+ P+ +TF+ +L AC H G+++EG YF M +E+G+ P +HY CMVDL GR+G + +
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A I MPM+P ++W +LLSG R ++K E A +L+EL+ N G+Y LLSN+YA
Sbjct: 357 AESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAK 416
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQR 622
RW +V IR M+ GI K PGCS+V+ + F VGD + +SER+YA+L E++QR
Sbjct: 417 TGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQR 476
Query: 623 IKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDC 682
++ GYV +T L D+++++K L HSEKLA+A+ ++ + PG P+RI KNLR+CGDC
Sbjct: 477 LREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDC 536
Query: 683 HTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
H + IS + EI++RD +RFHHF++GSCSCR++W
Sbjct: 537 HLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 18/370 (4%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
WN ++ A V + + M + + D + +LP+F + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
+ GL +D FV SL++MY+ CG + A +VF+ KD+ +WN++V Y+ G+ ++
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ-----SCHSKPNEVTL 238
A LF++M E N V+SWS +I GY G EAL++FR+MQ +PNE T+
Sbjct: 147 ARKLFDEMPERN----VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
++LS C +GAL GK H Y K + D +++ A+IDMY KC S+ A+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEID------IVLGTALIDMYAKCGSLERAKRV 256
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F+++ K ++V ++AMI A +G ++ +LFS+M D ++ PN+ T L AC
Sbjct: 257 FNALGSK-KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD-NINPNSVTFVGILGACVH 314
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWT 417
+ G+ ++ + + C++D Y +SG I A +M + + W
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWG 374
Query: 418 SLITGYGMHG 427
SL++G M G
Sbjct: 375 SLLSGSRMLG 384
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW-- 88
N+VV Y + G +D AR++FDEM + + +SW+ ++ YV G K AL LF++M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNV---ISWSCLINGYVMCGKYKEALDLFREMQLP 188
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+ + ++ + ++ VL A +G+ GK VH + + + D+ +G +L+DMYAKCG
Sbjct: 189 KPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCG 248
Query: 149 MMHEASKVFERM-QKKDVVSWNAMVTGYSHIGMFENALTLFEQM-REENIELDVVSWSTV 206
+ A +VF + KKDV +++AM+ + G+ + LF +M +NI + V++ +
Sbjct: 249 SLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGI 308
Query: 207 IAGYAQKGLGYEALNVFRQM 226
+ +GL E + F+ M
Sbjct: 309 LGACVHRGLINEGKSYFKMM 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 38/222 (17%)
Query: 338 QDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD 397
++ V P+ T L + L G+ HA +L D D +V L++ YS GD
Sbjct: 54 RNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDP-FVRTSLLNMYSSCGD 112
Query: 398 -------------------------------IDVARVVFDNMKHKNAVSWTSLITGYGMH 426
ID AR +FD M +N +SW+ LI GY M
Sbjct: 113 LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMC 172
Query: 427 GQGEEAVKVFEEMR----KEGLL-PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI 481
G+ +EA+ +F EM+ E + P+ T +L AC G +++G K+ +Y V
Sbjct: 173 GKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVE 231
Query: 482 PGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALL 523
++D+ + G L++A ++ + K + A++
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++ + A++ MY +CG+L+ A+++F+ + + D+ ++++M+ G T LF
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKK--DVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS-GLFEDVFVGNSLVDMY 144
+M +I ++V+ V +L A G GK + G+ + +VD+Y
Sbjct: 291 EM--TTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 145 AKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV-- 201
+ G++ EA M + DV+ W ++++G +G + +++ IELD +
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL----IELDPMNS 404
Query: 202 -SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
++ + YA+ G E + +M EV ++ + GC+ V
Sbjct: 405 GAYVLLSNVYAKTGRWMEVKCIRHEM--------EVKGINKVPGCSYV 444
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 278/441 (63%), Gaps = 7/441 (1%)
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
IN II+ K +A+ + + + D+NV+TW MIGGY ++ + ++L+ ML
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNAS--DQNVITWNLMIGGYVRNVQYEEALKALKNMLSF 158
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
+KPN F+ + SL ACARL L + +H+ ++ + + + + +++ L+D Y+K GDI
Sbjct: 159 T-DIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDI 216
Query: 399 DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
+R VF ++K + W ++ITG+ HG EA++VF EM E + PD ITFL +L C
Sbjct: 217 GTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC 276
Query: 459 SHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVV 518
SH G+++EG +YF MS+ + + P EHY MVDLLGRAGR+ +A +LIE MP++P V+
Sbjct: 277 SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI 336
Query: 519 WVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKH 578
W +LLS R ++N +LGE A L + +S G Y LLSNIY++ ++W+ ++R LM
Sbjct: 337 WRSLLSSSRTYKNPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 579 TGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHD 638
GI+K G SW++ F GD +H +++ +Y +L LIQ+ K G+V +T L D
Sbjct: 394 EGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMD 453
Query: 639 VDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEII 698
V +EEK + L HSEKLALAY IL S+PG IRI KN+R+C DCH I +S ++ II
Sbjct: 454 VSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVII 513
Query: 699 LRDSSRFHHFKNGSCSCRNYW 719
+RD RFH F++G CSCR+YW
Sbjct: 514 MRDRIRFHRFEDGLCSCRDYW 534
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 24/309 (7%)
Query: 120 QVHG--FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKV---FERMQKKDVVSWNAMVTG 174
Q H F + G + + V S V Y +C + A ++ F + V + N ++
Sbjct: 51 QAHAQIFKLGYGTYPSLLV--STVAAYRRCNRSYLARRLLLWFLSLSP-GVCNINLIIES 107
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS-CHSKP 233
IG A + ++N V++W+ +I GY + EAL + M S KP
Sbjct: 108 LMKIGESGLAKKVLRNASDQN----VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 234 NEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
N+ + S L+ CA +G L H K H I D + ++ +A++D+Y KC I
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMI------DSGIELNAILSSALVDVYAKCGDIG 217
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
+R +F SV K +V W AMI G+A HG A +++ +FS+M + V P++ T L
Sbjct: 218 TSREVFYSV--KRNDVSIWNAMITGFATHGLATEAIRVFSEM--EAEHVSPDSITFLGLL 273
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKN 412
C+ L G+E + R L ++D ++G + A + ++M +
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 413 AVSWTSLIT 421
V W SL++
Sbjct: 334 VVIWRSLLS 342
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 136/301 (45%), Gaps = 48/301 (15%)
Query: 18 LV*WVLNSNVFVCNA--VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
L+ W L+ + VCN ++ + G A+++ ++++WN M+ YV++
Sbjct: 87 LLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQ---NVITWNLMIGGYVRNV 143
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ AL + M D I+ + S + L A A +G K VH + SG+ +
Sbjct: 144 QYEEALKALKNMLSFTD--IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI 201
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
+ ++LVD+YAKCG + + +VF +++ DV WNAM+TG++ G+ A+ +F +M E
Sbjct: 202 LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE- 260
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
H P+ +T + LL+ C+ G L GK
Sbjct: 261 ----------------------------------HVSPDSITFLGLLTTCSHCGLLEEGK 286
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
E +++ Q +L A++D+ + + A + +S+ P + +VV W ++
Sbjct: 287 EYF-----GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM-PIEPDVVIWRSL 340
Query: 316 I 316
+
Sbjct: 341 L 341
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 341/603 (56%), Gaps = 51/603 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S+++V ++++ MY +CG + A +MFDE+ K D+V+W+SMV+ + ++G A+
Sbjct: 73 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP---DIVTWSSMVSGFEKNGSPYQAVE 129
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F++M ++ D+ D V+L+ ++ A + + G+ VHGF +R G D+ + NSL++
Sbjct: 130 FFRRM--VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 187
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YAK F+ A+ LF+ + E+ DV+S
Sbjct: 188 CYAKSRA-------------------------------FKEAVNLFKMIAEK----DVIS 212
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
WSTVIA Y Q G EAL VF M ++PN T++ +L CA+ L G++TH I
Sbjct: 213 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 272
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ L + E+ V A++DMY KC S A A+F + KD VV+W A+I G+ +
Sbjct: 273 RKGL------ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD--VVSWVALISGFTLN 324
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G A+ S+E FS ML ++ + +P+A + L +C+ L L + H+YV++ +DS+
Sbjct: 325 GMAHRSIEEFSIMLLENNT-RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP- 382
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
++ L++ YS+ G + A VF+ + K+ V WTSLITGYG+HG+G +A++ F M K
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 442
Query: 443 G-LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
+ P+ +TFL +L ACSH+G++ EG++ F M +Y + P EHYA +VDLLGR G LD
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 502
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
A+++ + MP P + LL CR H+N ++ E A KL ELES + G Y L+SN+Y
Sbjct: 503 TAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYG 562
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
W++V ++R+ +K GIKK S ++ ++ F D HP+ E +Y +L EL
Sbjct: 563 VKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDL 622
Query: 622 RIK 624
+K
Sbjct: 623 HMK 625
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 19/327 (5%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+T++ +++ E L F M KP+ TL L C + + +G+ H +
Sbjct: 9 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 68
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K D +L V +++I MY KC + A +FD + D +VTW++M+ G+ ++
Sbjct: 69 K-----DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD--IVTWSSMVSGFEKN 121
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G ++E F +M+ V P+ T+ + AC +L+ R GR +H +V+R + +D L
Sbjct: 122 GSPYQAVEFFRRMVMAS-DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND-L 179
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ N L++ Y+KS A +F + K+ +SW+++I Y +G EA+ VF +M +
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH----YACMVDLLGRAG 498
G P+ T L +L AC+ + +++G K + E + G E +VD+ +
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRK-----THELAIRKGLETEVKVSTALVDMYMKCF 294
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSG 525
++A + +P K V WVAL+SG
Sbjct: 295 SPEEAYAVFSRIPRK-DVVSWVALISG 320
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
R++ W ++ ++ + + L FS M + + KP+ FT+ +L AC L + G
Sbjct: 4 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE--KPDNFTLPVALKACGELREVNYGE 61
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMH 426
IH +V ++ LYV + LI Y K G + A +FD ++ + V+W+S+++G+ +
Sbjct: 62 MIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKN 121
Query: 427 GQGEEAVKVFEEM-RKEGLLPDGITFLVMLYACS 459
G +AV+ F M + PD +T + ++ AC+
Sbjct: 122 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 155
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/606 (34%), Positives = 334/606 (55%), Gaps = 52/606 (8%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K+V+GF + +G + ++ N ++ M+ KCGM+ +A +
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARR----------------------- 179
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
LF+++ E N+ S+ ++I+G+ G EA +F+ M S T
Sbjct: 180 --------LFDEIPERNL----YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTF 227
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
+L A +G++ GK+ H +K + D V +IDMY+KC I AR
Sbjct: 228 AVMLRASAGLGSIYVGKQLHVCALKLGV------VDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F+ + K V W +I GYA HG + ++L L M +D V + FT+S + +
Sbjct: 282 FECMPEK--TTVAWNNVIAGYALHGYSEEALCLLYDM--RDSGVSIDQFTLSIMIRISTK 337
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVAN-CLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
LA L ++ HA ++RN ++S++ VAN L+D YSK G +D AR VFD + KN +SW
Sbjct: 338 LAKLELTKQAHASLIRNGFESEI--VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWN 395
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
+L+ GY HG+G +AVK+FE+M + P+ +TFL +L AC++SG+ ++G + F MS+
Sbjct: 396 ALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEV 455
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
+G+ P HYACM++LLGR G LD+A+ I P+K +W ALL+ CR EN++LG
Sbjct: 456 HGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRV 515
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTA 597
A KL + E G+Y ++ N+Y + + + + ++ G+ P C+WV+ T
Sbjct: 516 VAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTH 575
Query: 598 TFFVGDRTHPQSE----RMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSE 653
+F GDR +E ++Y + EL++ I GY E L DVD++E+ + HSE
Sbjct: 576 SFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSE 635
Query: 654 KLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSC 713
KLA+AYG++ + P++IT+N R+C +CH + +IS++ E+++RD+SRFHHFK G C
Sbjct: 636 KLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKC 695
Query: 714 SCRNYW 719
SC YW
Sbjct: 696 SCGGYW 701
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 201/431 (46%), Gaps = 56/431 (12%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
++ N ++ M+ +CG + AR++FDE+ + +L S+ S+++ +V G+ A LF+ M
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPER---NLYSYYSIISGFVNFGNYVEAFELFKMM 215
Query: 88 WE-MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
WE + D + AV +L A A +GS + GKQ+H A++ G+ ++ FV L+DMY+K
Sbjct: 216 WEELSDCETHTFAV----MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK 271
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
CG + +A FE M +K V+WN ++ GY+ G E AL L MR+ + +D
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID------- 324
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
+ TL ++ + L K+ H I+
Sbjct: 325 ----------------------------QFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ E++ A++D Y+K + AR +FD + K N+++W A++GGYA HG
Sbjct: 357 ------ESEIVANTALVDFYSKWGRVDTARYVFDKLPRK--NIISWNALMGGYANHGRGT 408
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
D+++LF +M+ + V PN T L ACA G EI +
Sbjct: 409 DAVKLFEKMIAAN--VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYA 466
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
C+I+ + G +D A K V+ W +L+ M E V E++ G+
Sbjct: 467 CMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY--GMG 524
Query: 446 PDGITFLVMLY 456
P+ + V++Y
Sbjct: 525 PEKLGNYVVMY 535
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 7/209 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N FV ++ MY +CG ++ AR F+ M + V+WN+++A Y G ++ AL L
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTT---VAWNNVIAGYALHGYSEEALCL-- 312
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+++M D + +D +L ++ + KQ H +R+G ++ +LVD Y+
Sbjct: 313 -LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
K G + A VF+++ +K+++SWNA++ GY++ G +A+ LFE+M N+ + V++
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHS-KP 233
V++ A GL + +F M H KP
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++ ELF ++L+ S K T + AC RL ++R + ++ +++ N ++ + Y+ N
Sbjct: 105 EAFELF-EILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPE-QYMMN 162
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
++ + K G I AR +FD + +N S+ S+I+G+ G EA ++F+ M +E
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
+ TF VML A + G + G + C K GV+ ++D+ + G ++ A
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALK-LGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 507 IEGMPMKPGQVVWVALLSGCRKH 529
E MP K V W +++G H
Sbjct: 282 FECMPEKT-TVAWNNVIAGYALH 303
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 378/713 (53%), Gaps = 71/713 (9%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
+ + NV + N ++ MY +CG + +ARQ+FD M + + VSW +++ YVQ+G+ +
Sbjct: 90 YCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV---VSWTALITGYVQAGNEQEG 146
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
LF M + +L +VL + + GKQVHG A++ GL ++V N++
Sbjct: 147 FCLFSSMLSHCFPN----EFTLSSVLTS----CRYEPGKQVHGLALKLGLHCSIYVANAV 198
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ MY +C H+ + +E A T+FE ++ +N+
Sbjct: 199 ISMYGRC---HDGAAAYE-------------------------AWTVFEAIKFKNL---- 226
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK----- 255
V+W+++IA + LG +A+ VF +M S + TL+++ S L+ +
Sbjct: 227 VTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC 286
Query: 256 -ETHCYTIKC-ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWT 313
+ H T+K ++ + V + +++ YT C + + + R++V W
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMS-------HCRDIVAWN 339
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
+I +A + + ++ LF Q L+Q++ + P+ +T S L ACA L R IHA V+
Sbjct: 340 GIITAFAVY-DPERAIHLFGQ-LRQEK-LSPDWYTFSSVLKACAGLVTARHALSIHAQVI 396
Query: 374 RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAV 433
+ + +D + + N LI Y+K G +D+ VFD+M ++ VSW S++ Y +HGQ + +
Sbjct: 397 KGGFLADTV-LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL 455
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDL 493
VF++M + PD TF+ +L ACSH+G V+EG++ F M ++ +P HYAC++D+
Sbjct: 456 PVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 494 LGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLEL-ESENDGS 552
L RA R +A ++I+ MPM P VVW+ALL CRKH N +LG+ AA+KL EL E N S
Sbjct: 513 LSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMS 572
Query: 553 YTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERM 612
Y +SNIY + + M+ ++K P SW + F G R P E +
Sbjct: 573 YIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAV 632
Query: 613 YAILTELIQRIKVLGYVPET-SFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEP-- 669
Y L LI +K +GYVPE S + D+E++ D L HSEKLALA+ ++
Sbjct: 633 YRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCG 692
Query: 670 ---IRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
I+I KN R+C DCH + S ++ EI++RDS+RFHHFK+ SCSC +YW
Sbjct: 693 VNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 221 NVFRQMQSCHSKPNEV----TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL 276
++ R + +S P E+ +L CA L+ G H + +L++ C +
Sbjct: 41 DIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHH----MLSHPYCYSQNV 96
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
++ N +I+MY KC +I AR +FD++ +RNVV+WTA+I GY Q G + LFS ML
Sbjct: 97 ILANFLINMYAKCGNILYARQVFDTMP--ERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
PN FT+S L +C G+++H L+ + YVAN +I Y +
Sbjct: 155 SH---CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSI-YVANAVISMYGRCH 206
Query: 397 DIDVAR---VVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFL 452
D A VF+ +K KN V+W S+I + G++A+ VF M +G+ D T L
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/594 (36%), Positives = 322/594 (54%), Gaps = 26/594 (4%)
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKK-----DVVSWNAMVTGYSHIGMFENALTL 187
D F+ N+LV Y++ H + VF M +K D S+ ++ + +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 188 FEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
Q + +E + +T+I Y G A VF +M +PN V ++++ C
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITACFR 184
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
+ +E +D+ N ++ Y K + A+ IF + +D
Sbjct: 185 GNDVAGAREI----------FDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
V+W+ MI G A +G N+S F ++ Q + PN +++ L AC++ + G+
Sbjct: 235 --VSWSTMIVGIAHNGSFNESFLYFREL--QRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNA-VSWTSLITGYGMH 426
+H +V + Y S ++ V N LID YS+ G++ +AR+VF+ M+ K VSWTS+I G MH
Sbjct: 291 LHGFVEKAGY-SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
GQGEEAV++F EM G+ PDGI+F+ +L+ACSH+G+++EG YFS M + Y + P EH
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 409
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELE 546
Y CMVDL GR+G+L KA I MP+ P +VW LL C H N++L E +L EL+
Sbjct: 410 YGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD 469
Query: 547 SENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTH 606
N G LLSN YA A +WKDV IR M IKK S V+ K F G++
Sbjct: 470 PNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKK 529
Query: 607 PQSERMYAILTELIQRIK-VLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSA 665
+ L E+I R+K GY PE + AL+DV++EEK D + HSEKLALA+ + +
Sbjct: 530 GIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLS 589
Query: 666 PGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
G IRI KNLR+C DCH + S + EI++RD +RFH FK+GSCSCR+YW
Sbjct: 590 KGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 214/446 (47%), Gaps = 52/446 (11%)
Query: 42 ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVS 101
AL +AR++ + + F +N++V Y +S + +++ +F +M M + D+ S
Sbjct: 54 ALPYARRLLLCFPEPDAF---MFNTLVRGYSESDEPHNSVAVFVEM--MRKGFVFPDSFS 108
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
V+ A + S G Q+H A++ GL +FVG +L+ MY CG + A KVF+ M
Sbjct: 109 FAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 168
Query: 162 KKDVVSWNAMVT-------------------------------GYSHIGMFENALTLFEQ 190
+ ++V+WNA++T GY G E+A +F +
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 191 MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
M D VSWST+I G A G E+ FR++Q PNEV+L +LS C+ G+
Sbjct: 229 MPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
GK H + K ++ + V NA+IDMY++C ++ +AR +F+ + K R +V
Sbjct: 285 FEFGKILHGFVEKAGYSWI------VSVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIV 337
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
+WT+MI G A HG+ +++ LF++M V P+ + L AC+ + G + +
Sbjct: 338 SWTSMIAGLAMHGQGEEAVRLFNEMTAY--GVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQG 429
+ R + + C++D Y +SG + A M A+ W +L+ HG
Sbjct: 396 EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNI 455
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVML 455
E A +V + R L P+ LV+L
Sbjct: 456 ELAEQV--KQRLNELDPNNSGDLVLL 479
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 102/380 (26%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKS----------------------EIFD 60
L S++FV ++ MYG CG ++ AR++FDEM++ EIFD
Sbjct: 137 LESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFD 196
Query: 61 LV------SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVD-------------------- 94
+ SWN M+A Y+++G+ +SA +F +M DV
Sbjct: 197 KMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLY 256
Query: 95 --------IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
+ + VSL VL A + GS+ FGK +HGF ++G V V N+L+DMY++
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 147 CGMMHEASKVFERMQKKD-VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
CG + A VFE MQ+K +VSW +M+ G + G E A+ LF +M + D +S+ +
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
++ + GL E + F +M+ + E+ GC
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY----GC-------------------- 412
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
++D+Y + + A F P + W ++G + HG
Sbjct: 413 ----------------MVDLYGRSGKLQKAYD-FICQMPIPPTAIVWRTLLGACSSHG-- 453
Query: 326 NDSLELFSQMLKQDRSVKPN 345
++EL Q+ ++ + PN
Sbjct: 454 --NIELAEQVKQRLNELDPN 471
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 300/545 (55%), Gaps = 46/545 (8%)
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
Y G A +F+ M +NI V+W+++++G + L +A + +M+ KP+
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNI----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 57
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
+T SL SG A++G +D+ K K
Sbjct: 58 AITWNSLASGYATLGK----------------------------PEKALDVIGKMKE--- 86
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
VAP NVV+WTA+ G +++G ++L++F +M Q+ V PNA T+S L
Sbjct: 87 -----KGVAP---NVVSWTAIFSGCSKNGNFRNALKVFIKM--QEEGVGPNAATMSTLLK 136
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
L+ L SG+E+H + LR D YVA L+D Y KSGD+ A +F +K+K+
Sbjct: 137 ILGCLSLLHSGKEVHGFCLRKNLICDA-YVATALVDMYGKSGDLQSAIEIFWGIKNKSLA 195
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
SW ++ GY M G+GEE + F M + G+ PD ITF +L C +SG+V EG KYF M
Sbjct: 196 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 255
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKL 534
YG+IP EH +CMVDLLGR+G LD+A I+ M +KP +W A LS C+ H +++L
Sbjct: 256 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLEL 315
Query: 535 GEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKK 594
E A +L LE N +Y ++ N+Y+N RW+DV RIR+LM++ ++ + SW+Q +
Sbjct: 316 AEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 375
Query: 595 GTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEK 654
F+ +THP +Y L +L+ +K GYVP+TS D+ D EK LL H+EK
Sbjct: 376 TVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEK 435
Query: 655 LALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCS 714
LA+ YG++ PIR+ KN +C D HT Y+S++ EI+L++ +R HHF++G CS
Sbjct: 436 LAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCS 495
Query: 715 CRNYW 719
C + W
Sbjct: 496 CNDSW 500
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 17/307 (5%)
Query: 132 EDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTL 187
+++ NSLV + ++ +A + RM+K+ D ++WN++ +GY+ +G E AL +
Sbjct: 21 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 80
Query: 188 FEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
+M+E+ + +VVSW+ + +G ++ G AL VF +MQ PN T+ +LL
Sbjct: 81 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 140
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
+ L GKE H + C+ CD V A++DMY K + A IF + K++
Sbjct: 141 LSLLHSGKEVHGF---CLRKNLICDA---YVATALVDMYGKSGDLQSAIEIFWGI--KNK 192
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
++ +W M+ GYA G + + FS ML + ++P+A T + L C ++ G +
Sbjct: 193 SLASWNCMLMGYAMFGRGEEGIAAFSVML--EAGMEPDAITFTSVLSVCKNSGLVQEGWK 250
Query: 368 IHAYVLRNQYD-SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGM 425
+ ++R++Y + +C++D +SG +D A M K +A W + ++ +
Sbjct: 251 -YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKI 309
Query: 426 HGQGEEA 432
H E A
Sbjct: 310 HRDLELA 316
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
+ + N++ + Y G + A + +M + + ++VSW ++ + ++G+ ++AL
Sbjct: 54 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 113
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F KM E + +A ++ +L + GK+VHGF +R L D +V +LV
Sbjct: 114 KVFIKMQEE---GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 170
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMY K G + A ++F ++ K + SWN M+ GY+ G E + F M E +E D +
Sbjct: 171 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 230
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQS 228
++++V++ GL E F M+S
Sbjct: 231 TFTSVLSVCKNSGLVQEGWKYFDLMRS 257
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/664 (33%), Positives = 345/664 (51%), Gaps = 85/664 (12%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V V N ++ MY +C + A +F+ M + + V+W SM+ Y Q+G A+ F+
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEK--NNVTWTSMLTGYSQNGFAFKAIECFR 216
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ + Q + + +VL A AS+ + G QVH V+SG +++V ++L+DMYA
Sbjct: 217 DLRREGN---QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC M A + E M+ DVVSWN+M+ G G+ AL++F +M E ++++D + +
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+ LN F ++ E+ + S HC +K
Sbjct: 334 I-------------LNCFALSRT------EMKIAS---------------SAHCLIVKTG 359
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ LV NA++DMY K + A +F+ + KD V++WTA++ G +G
Sbjct: 360 YATYK------LVNNALVDMYAKRGIMDSALKVFEGMIEKD--VISWTALVTGNTHNGSY 411
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+++L+LF M + + P+ + L A A L L G+++H +++ + S L V
Sbjct: 412 DEALKLFCNM--RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS-LSVN 468
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
N L+ Y+K G ++ A V+F++M+ ++ ++WT LI GY +G E+A + F+ MR
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMR----- 523
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
YG+ PG EHYACM+DL GR+G K +
Sbjct: 524 ------------------------------TVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
L+ M ++P VW A+L+ RKH N++ GE AA L+ELE N Y LSN+Y+ A R
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGR 613
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
+ +R LMK I K PGCSWV+ K +F DR HP+ +Y+ + E++ IK
Sbjct: 614 QDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKE 673
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
GY + SFALHD+D E K L HSEKLA+A+G+L G PIRI KNLRVCGDCH+A
Sbjct: 674 AGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSA 733
Query: 686 ISYI 689
+ +
Sbjct: 734 MKLL 737
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 228/411 (55%), Gaps = 24/411 (5%)
Query: 117 FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
FG +H +A R+ L ++ +G+ +K G + EA ++F++M ++D +WN M+ YS
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
+ +A LF N + +SW+ +I+GY + G EA N+F +MQS KPNE
Sbjct: 71 NSRRLSDAEKLFRS----NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEY 126
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
TL S+L C S+ L+ G++ H +TIK + D + V+N ++ MY +CK IS A
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD------VNVVNGLLAMYAQCKRISEAE 180
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+F+++ ++N VTWT+M+ GY+Q+G A ++E F + ++ + N +T L AC
Sbjct: 181 YLFETM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN--QSNQYTFPSVLTAC 237
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
A ++A R G ++H ++++ + +++ YV + LID Y+K +++ AR + + M+ + VSW
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNI-YVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML--YACSHSGMVDEGIKYFSCM 474
S+I G G EA+ +F M + + D T +L +A S + M + C+
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH--CL 354
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ G + +VD+ + G +D A+K+ EGM ++ + W AL++G
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 199/436 (45%), Gaps = 91/436 (20%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
CC+V +N++V +A++ MY +C ++ AR + + M E+ D+VSWNSM+ V+ G
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM---EVDDVVSWNSMIVGCVRQG 307
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFA-SMGSWWFGKQVHGFAVRSGLFEDV 134
AL +F +M E D+++D ++ ++L FA S H V++G
Sbjct: 308 LIGEALSMFGRMHER---DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 135 FVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE 194
V N+LVDMYAK G+M A KVFE M +KDV+SW A+VTG +H G ++ AL LF MR
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 195 NIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
I P+++ S+LS A + L G
Sbjct: 425 GI-----------------------------------TPDKIVTASVLSASAELTLLEFG 449
Query: 255 KETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTA 314
++ H IK L V N+++ MYTKC S+ A IF+S+ +D ++TWT
Sbjct: 450 QQVHGNYIKSGF------PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD--LITWTC 501
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
+I GYA++G D+ F M R+V + G E +A
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSM----RTV-----------------YGITPGPEHYA---- 536
Query: 375 NQYDSDVLYVANCLIDTYSKSGD-IDVARVVFDNMKHKNAVSWTSLITGYGMHG---QGE 430
C+ID + +SGD + V +++ +A W +++ HG GE
Sbjct: 537 ------------CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE 584
Query: 431 EAVKVFEEMRKEGLLP 446
A K E+ +P
Sbjct: 585 RAAKTLMELEPNNAVP 600
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 337/648 (52%), Gaps = 83/648 (12%)
Query: 18 LV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT 77
+V + + + F+ + +++ Y R A +FDE+ F S+N+++ AY
Sbjct: 48 IVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAF---SYNALLIAYTSREMY 104
Query: 78 KSALGLFQKMW---EMVDVDI-QLDAVSLVNVLPAFASMGSWWFG---KQVHGFAVRSGL 130
A LF W D + D++S+ VL A + +W G +QVHGF +R G
Sbjct: 105 FDAFSLFLS-WIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 131 FEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQ 190
DVFVGN ++ Y KC + A KVF+ M ++DVVSWN+M++GYS G FE+ +++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 191 MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
M + KPN VT++S+ C
Sbjct: 224 M----------------------------------LACSDFKPNGVTVISVFQACGQSSD 249
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
LI G E H K I N+ + D L + NA+I Y KC S+ ARA+FD ++ KD V
Sbjct: 250 LIFGLEVH---KKMIENHIQMD---LSLCNAVIGFYAKCGSLDYARALFDEMSEKDS--V 301
Query: 311 TWTAMIGGYAQHGEANDSLELFSQM--------------LKQDR---------------S 341
T+ A+I GY HG +++ LFS+M L Q+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+PN T+S L + + L+ G+EIHA+ +RN D+++ YV +ID Y+K G + A
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI-YVTTSIIDNYAKLGFLLGA 420
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
+ VFDN K ++ ++WT++IT Y +HG + A +F++M+ G PD +T +L A +HS
Sbjct: 421 QRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHS 480
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVA 521
G D F M +Y + PG EHYACMV +L RAG+L AM+ I MP+ P VW A
Sbjct: 481 GDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGA 540
Query: 522 LLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
LL+G ++++ FA ++L E+E EN G+YT+++N+Y A RW++ +R+ MK G+
Sbjct: 541 LLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
Query: 582 KKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYV 629
KK PG SW++ +KG +F D + +S+ MY I+ L++ + Y+
Sbjct: 601 KKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 315/568 (55%), Gaps = 56/568 (9%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
+V NA++ MY G ++ AR +FD M D++SWN+M++ Y ++G AL +F
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNR---DVISWNTMISGYYRNGYMNDALMMFD-- 207
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
W MV+ + LD ++V++LP + G+ VH L + + V N+LV+MY KC
Sbjct: 208 W-MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKC 266
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G M EA V F++M DV++W+ +I
Sbjct: 267 GRMDEARFV-------------------------------FDRMERR----DVITWTCMI 291
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
GY + G AL + R MQ +PN VT+ SL+S C + GK H + ++ +
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
D +++ ++I MY KCK + + +F + W+A+I G Q+ +D
Sbjct: 352 SD------IIIETSLISMYAKCKRVDLCFRVFSGASKYHTG--PWSAIIAGCVQNELVSD 403
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+L LF +M ++D V+PN T++ L A A LA LR IH Y+ + + S L A
Sbjct: 404 ALGLFKRMRRED--VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS-LDAATG 460
Query: 388 LIDTYSKSGDIDVARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
L+ YSK G ++ A +F+ + K K+ V W +LI+GYGMHG G A++VF EM + G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ P+ ITF L ACSHSG+V+EG+ F M + Y + HY C+VDLLGRAGRLD+A
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 504 MKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
LI +P +P VW ALL+ C HENV+LGE AANKL ELE EN G+Y LL+NIYA
Sbjct: 581 YNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAAL 640
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
RWKD+ ++RS+M++ G++K+PG S ++
Sbjct: 641 GRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 239/504 (47%), Gaps = 54/504 (10%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+ + + Y CG + +AR++F+EM +S L+S+N ++ YV+ G A+ +F +M
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQS---SLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
V D + V A + S G VHG +RS D +V N+L+ MY G
Sbjct: 108 SE-GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFG 166
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+ A VF+ M+ +DV+SWN M++GY G +AL +F+ M E+++LD
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD--------- 217
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
T+VS+L C + L G+ H L
Sbjct: 218 --------------------------HATIVSMLPVCGHLKDLEMGRNVH------KLVE 245
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
++ D++ V NA+++MY KC + AR +FD + + R+V+TWT MI GY + G+ ++
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM--ERRDVITWTCMINGYTEDGDVENA 303
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
LEL M Q V+PNA TI+ + C + G+ +H + +R Q SD++ + L
Sbjct: 304 LELCRLM--QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII-IETSL 360
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
I Y+K +D+ VF + W+++I G + +A+ +F+ MR+E + P+
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 449 ITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
T +L A + + + + C + G + + +V + + G L+ A K+
Sbjct: 421 ATLNSLLPAYAALADLRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 509 GMPMKPGQ---VVWVALLSGCRKH 529
G+ K V+W AL+SG H
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMH 503
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 198/427 (46%), Gaps = 57/427 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L + V NA+V MY +CG +D AR +FD M E D+++W M+ Y + GD ++AL
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRM---ERRDVITWTCMINGYTEDGDVENALE 305
Query: 83 LFQKM-WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L + M +E ++ +AV++ +++ GK +HG+AVR ++ D+ + SL+
Sbjct: 306 LCRLMQFE----GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
MYAKC + +VF K W+A++ G + +AL LF++MR E++E ++
Sbjct: 362 SMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+ ++++ YA +A+N+ HCY
Sbjct: 422 TLNSLLPAYAALADLRQAMNI-----------------------------------HCYL 446
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP--KDRNVVTWTAMIGGY 319
K L ++ +Y+KC ++ A IF+ + K ++VV W A+I GY
Sbjct: 447 TKTGF------MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
HG+ +++L++F +M++ V PN T + +L AC+ + G + ++L +
Sbjct: 501 GMHGDGHNALQVFMEMVRS--GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQ---GEEAVKV 435
C++D ++G +D A + + + + W +L+ H GE A
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANK 618
Query: 436 FEEMRKE 442
E+ E
Sbjct: 619 LFELEPE 625
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 158/318 (49%), Gaps = 13/318 (4%)
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
SLL+ A+ ++ K HC+ I R +++ + Y C I+ AR +F
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITG----GRVSGH---ILSTLSVTYALCGHITYARKLF 72
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
+ + P+ +++++ +I Y + G +D++ +F +M+ + P+ +T A L
Sbjct: 73 EEM-PQS-SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
+++ G +H +LR+ + D YV N L+ Y G +++AR VFD MK+++ +SW ++
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDK-YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
I+GY +G +A+ +F+ M E + D T + ML C H ++ G + + +E
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG-RNVHKLVEEKR 248
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAA 539
+ E +V++ + GR+D+A + + M + + W +++G + +V+
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD-VITWTCMINGYTEDGDVE-NALEL 306
Query: 540 NKLLELESENDGSYTLLS 557
+L++ E + T+ S
Sbjct: 307 CRLMQFEGVRPNAVTIAS 324
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 332/603 (55%), Gaps = 52/603 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N+FV NA+V MY +CGAL+ ARQ+F+ M D V+WN+++ +YVQ + A
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDR---DNVTWNTIIGSYVQDENESEAFD 515
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF++M I D L + L A + + GKQVH +V+ GL D+ G+SL+D
Sbjct: 516 LFKRMNL---CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG + ++A +F + E VVS
Sbjct: 573 MYSKCG-------------------------------IIKDARKVFSSLPE----WSVVS 597
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ +IAGY+Q L EA+ +F++M + P+E+T +++ C +L G + H
Sbjct: 598 MNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + + E L I +++ MY + ++ A A+F ++ +++V WT M+ G++Q+
Sbjct: 657 KRGFS----SEGEYLGI-SLLGMYMNSRGMTEACALFSELSSP-KSIVLWTGMMSGHSQN 710
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G ++L+ + +M + V P+ T L C+ L++LR GR IH+ + +D D L
Sbjct: 711 GFYEEALKFYKEM--RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+N LID Y+K GD+ + VFD M+ + N VSW SLI GY +G E+A+K+F+ MR+
Sbjct: 769 -TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
++PD ITFL +L ACSH+G V +G K F M +YG+ +H ACMVDLLGR G L
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A IE +KP +W +LL CR H + GE +A KL+ELE +N +Y LLSNIYA
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 947
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
+ W+ +R +M+ G+KK PG SW+ ++ T F GD++H + ++ L +L
Sbjct: 948 SQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYD 1007
Query: 622 RIK 624
+K
Sbjct: 1008 LMK 1010
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 256/509 (50%), Gaps = 56/509 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMY-KSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L SN++V +++V+MY +C ++ A ++F+ + K+++F WN+M+ Y +G++ +
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF----WNAMIRGYAHNGESHKVM 413
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF +M +D + ++L A+ G Q H ++ L +++FVGN+LV
Sbjct: 414 ELFM---DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMYAKCG + +A ++FERM +D V+WN
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWN-------------------------------- 498
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
T+I Y Q EA ++F++M C + L S L C V L GK+ HC +
Sbjct: 499 ---TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+KC L+ D L +++IDMY+KC I AR +F S+ + +VV+ A+I GY+Q
Sbjct: 556 VKCGLDRD------LHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALIAGYSQ 607
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ +++ LF +ML R V P+ T + + AC + +L G + H + + + S+
Sbjct: 608 N-NLEEAVVLFQEMLT--RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKH-KNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
Y+ L+ Y S + A +F + K+ V WT +++G+ +G EEA+K ++EMR
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
+G+LPD TF+ +L CS + EG S + + E ++D+ + G +
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD-ELTSNTLIDMYAKCGDM 783
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ ++ + M + V W +L++G K+
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 234/494 (47%), Gaps = 53/494 (10%)
Query: 32 AVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
V+ Y R G L AR +F EM D+V+WN M++ + + G A+ F + M
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSP---DVVAWNVMISGHGKRGCETVAIEYF---FNMR 319
Query: 92 DVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
++ +L +VL A + + G VH A++ GL +++VG+SLV MY+KC M
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 152 EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
A+KVFE +++K+ V WNAM+ GY+H G + LF M+ +D
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID------------ 427
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRC 271
+ T SLLS CA+ L G + H IK L
Sbjct: 428 -----------------------DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL----- 459
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
L V NA++DMY KC ++ AR IF+ + DR+ VTW +IG Y Q +++ +L
Sbjct: 460 -AKNLFVGNALVDMYAKCGALEDARQIFERMC--DRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
F +M + + ++ +L AC + L G+++H ++ D D L+ + LID
Sbjct: 517 FKRM--NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD-LHTGSSLIDM 573
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
YSK G I AR VF ++ + VS +LI GY + EEAV +F+EM G+ P ITF
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
++ AC + G ++ ++K GE ++ + + + +A L +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 512 MKPGQVVWVALLSG 525
V+W ++SG
Sbjct: 693 SPKSIVLWTGMMSG 706
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 220/504 (43%), Gaps = 96/504 (19%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
NA+V +Y +C + +A + FD + K D+ +WNSM++ Y G L F ++E
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLEK----DVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
I + + VL A + FG+Q+H ++ GL + + G +LVDMYAKC +
Sbjct: 155 ---QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRI 211
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
+A +VFE + ++ + V W+ + +GY
Sbjct: 212 SDARRVFEWI-----------------------------------VDPNTVCWTCLFSGY 236
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
+ GL EA+ VF +M+ +P+ + V+
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVT------------------------------ 266
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+I+ Y + + AR +F ++ D VV W MI G+ + G ++E
Sbjct: 267 -----------VINTYIRLGKLKDARLLFGEMSSPD--VVAWNVMISGHGKRGCETVAIE 313
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
F M K SVK T+ L A +A L G +HA ++ S++ YV + L+
Sbjct: 314 YFFNMRKS--SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLVS 370
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
YSK ++ A VF+ ++ KN V W ++I GY +G+ + +++F +M+ G D T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 451 FLVMLYACSHSGMVDEGIKYFSCMSKE---YGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
F +L C+ S ++ G ++ S + K+ + G +VD+ + G L+ A ++
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN----ALVDMYAKCGALEDARQIF 486
Query: 508 EGMPMKPGQVVWVALLSGCRKHEN 531
E M + V W ++ + EN
Sbjct: 487 ERMCDRD-NVTWNTIIGSYVQDEN 509
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 344/654 (52%), Gaps = 55/654 (8%)
Query: 100 VSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER 159
+SL++ AS+ + VH +R G+ V LV + + +F
Sbjct: 33 ISLIHACKDTASL------RHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRN 85
Query: 160 MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY-- 217
++++ NA++ G + FE+++ F M ++ D +++ V+ ++ G +
Sbjct: 86 SEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 218 EALN--VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDE 275
AL+ + C S +SL+ A G L H + + DR ++
Sbjct: 146 RALHAATLKNFVDCDS----FVRLSLVDMYAKTGQLKHAFQVFEESP------DRIKKES 195
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPK-----------------------------D 306
+L+ N +I+ Y + K + +A +F S+ + +
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
+NVV+WT +I G++Q G+ ++ + +ML ++ +KPN +TI+ L AC++ AL SG
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEML--EKGLKPNEYTIAAVLSACSKSGALGSGI 313
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMH 426
IH Y+L N D + L+D Y+K G++D A VF NM HK+ +SWT++I G+ +H
Sbjct: 314 RIHGYILDNGIKLDRA-IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVH 372
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
G+ +A++ F +M G PD + FL +L AC +S VD G+ +F M +Y + P +H
Sbjct: 373 GRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKH 432
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELE 546
Y +VDLLGRAG+L++A +L+E MP+ P W AL C+ H+ + E + LLEL+
Sbjct: 433 YVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELD 492
Query: 547 SENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRP-GCSWVQGKKGTATFFVGDRT 605
E GSY L +A+ +DV + R L IK+R G S+++ F GD +
Sbjct: 493 PELCGSYIFLDKTHASKGNIQDVEK-RRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYS 551
Query: 606 HPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSA 665
H ++ + L E+I GY P +++HD+++EEK ++ HSEKLAL G L +A
Sbjct: 552 HKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTA 611
Query: 666 PGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
PG IRI KNLR+CGDCH+ + Y+S I Q +I+LRD+ +FHHFK+G CSC +YW
Sbjct: 612 PGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
+ ++ Y G L+ A+Q+F+ M + + VSW +++ + Q+GD ++A+ + +EM
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNV---VSWTTLINGFSQTGDYETAISTY---FEM 284
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
++ ++ + ++ VL A + G+ G ++HG+ + +G+ D +G +LVDMYAKCG +
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
A+ VF M KD++SW AM+ G++ G F A+ F QM + D V + V+
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 211 AQKGLGYEALNVFRQMQ 227
LN F M+
Sbjct: 405 LNSSEVDLGLNFFDSMR 421
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 143/366 (39%), Gaps = 83/366 (22%)
Query: 230 HSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKC 289
+ P+E +SL+ C +L H H ++ + R V ++ +
Sbjct: 24 QASPDESHFISLIHACKDTASLRH---VHAQILRRGVLSSR-------VAAQLVSCSSLL 73
Query: 290 KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTI 349
KS + +IF + ++RN A+I G ++ S+ F ML+ VKP+ T
Sbjct: 74 KSPDYSLSIFRN--SEERNPFVLNALIRGLTENARFESSVRHFILMLRL--GVKPDRLTF 129
Query: 350 SCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG------------- 396
L + ++L GR +HA L+N D D +V L+D Y+K+G
Sbjct: 130 PFVLKSNSKLGFRWLGRALHAATLKNFVDCDS-FVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 397 ----------------------DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVK 434
D+ +A +F +M +N+ SW++LI GY G+ A +
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 435 VFE-------------------------------EMRKEGLLPDGITFLVMLYACSHSGM 463
+FE EM ++GL P+ T +L ACS SG
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 464 VDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALL 523
+ GI+ + + G+ +VD+ + G LD A + M K + W A++
Sbjct: 309 LGSGIRIHGYI-LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK-DILSWTAMI 366
Query: 524 SGCRKH 529
G H
Sbjct: 367 QGWAVH 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 14/247 (5%)
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
DR P+ + AC A+LR +HA +LR S VA L+ S
Sbjct: 22 DRQASPDESHFISLIHACKDTASLR---HVHAQILRRGVLSS--RVAAQLVSCSSLLKSP 76
Query: 399 DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
D + +F N + +N +LI G + + E +V+ F M + G+ PD +TF +L +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 459 SHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPG 515
S G G + K + V +VD+ + G+L A ++ E P K
Sbjct: 137 SKLGFRWLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 516 QVVWVALLSG-CRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRS 574
++W L++G CR K A + N GS++ L Y ++ ++
Sbjct: 196 ILIWNVLINGYCR----AKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFE 251
Query: 575 LMKHTGI 581
LM +
Sbjct: 252 LMPEKNV 258
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 333/631 (52%), Gaps = 67/631 (10%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K +HGF +R+ L DVFV + L+ + ++ + + GY
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL----------------GY--- 69
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
A +F Q++ N+ + ++ +I ++ +A + QM P+ +T
Sbjct: 70 -----AYGIFSQIQNPNLFV----FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF 120
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
L+ + + ++ G++TH ++ Q+++ V N+++ MY C I+ A I
Sbjct: 121 PFLIKASSEMECVLVGEQTHSQIVRFGF------QNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD------------------- 339
F + +D VV+WT+M+ GY + G ++ E+F +M ++
Sbjct: 175 FGQMGFRD--VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 232
Query: 340 ----------RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
V N + + +CA L AL G + YV+++ + L + L+
Sbjct: 233 AIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVN-LILGTALV 291
Query: 390 DTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI 449
D + + GDI+ A VF+ + +++SW+S+I G +HG +A+ F +M G +P +
Sbjct: 292 DMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 450 TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
TF +L ACSH G+V++G++ + M K++G+ P EHY C+VD+LGRAG+L +A I
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK 411
Query: 510 MPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDV 569
M +KP + ALL C+ ++N ++ E N L++++ E+ G Y LLSNIYA A +W +
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 570 TRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVG-DRTHPQSERMYAILTELIQRIKVLGY 628
+R +MK +KK PG S ++ F +G D+ HP+ ++ E++ +I+++GY
Sbjct: 472 ESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
Query: 629 VPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISY 688
T A DVD+EEK + HSEKLA+AYG++ + PG IRI KNLRVC DCHT
Sbjct: 532 KGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKL 591
Query: 689 ISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
IS + E+I+RD +RFHHF+NG CSCR+YW
Sbjct: 592 ISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 218/448 (48%), Gaps = 33/448 (7%)
Query: 23 LNSNVFVCNAVV-------TMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
L S+VFV + ++ T L +A +F ++ +F +N ++ +
Sbjct: 40 LISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLF---VFNLLIRCFSTGA 96
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ A G + +M+ I D ++ ++ A + M G+Q H VR G DV+
Sbjct: 97 EPSKAFGFYT---QMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVY 153
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
V NSLV MYA CG + A ++F +M +DVVSW +MV GY GM ENA +F++M N
Sbjct: 154 VENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRN 213
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
+ +WS +I GYA+ +A+++F M+ NE +VS++S CA +GAL G+
Sbjct: 214 L----FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGE 269
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+ Y +K + + L++ A++DM+ +C I A +F+ + D ++W+++
Sbjct: 270 RAYEYVVKSHMTVN------LILGTALVDMFWRCGDIEKAIHVFEGLPETDS--LSWSSI 321
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I G A HG A+ ++ FSQM+ P T + L AC+ + G EI+ + ++
Sbjct: 322 IKGLAVHGHAHKAMHYFSQMI--SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVK 434
L C++D ++G + A M K NA +L+ ++ E A +
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 435 VFEEMRKEGLLPDGITFLVML---YACS 459
V + K + P+ + V+L YAC+
Sbjct: 440 VGNMLIK--VKPEHSGYYVLLSNIYACA 465
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 355 bits (910), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 327/615 (53%), Gaps = 70/615 (11%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V A + MY +C + A+ +FD SE + S+N+M+ Y Q AL LF ++
Sbjct: 276 VRTATLDMYAKCDNMQDAQILFD---NSENLNRQSYNAMITGYSQEEHGFKALLLFHRL- 331
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+ + D +SL V A A + G Q++G A++S L DV V N+ +DMY KC
Sbjct: 332 --MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 389
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+ EA +V F++MR D VSW+ +IA
Sbjct: 390 ALAEAFRV-------------------------------FDEMRRR----DAVSWNAIIA 414
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
+ Q G GYE L +F M +P+E T S+L C G+L +G E H +K +
Sbjct: 415 AHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMAS 473
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK------------------DRNVV 310
+ V ++IDMY+KC I A I + V
Sbjct: 474 NSS------VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 527
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
+W ++I GY ++ D+ LF++M++ + P+ FT + L CA LA+ G++IHA
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEM--GITPDKFTYATVLDTCANLASAGLGKQIHA 585
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
V++ + SDV Y+ + L+D YSK GD+ +R++F+ ++ V+W ++I GY HG+GE
Sbjct: 586 QVIKKELQSDV-YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 644
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACM 490
EA+++FE M E + P+ +TF+ +L AC+H G++D+G++YF M ++YG+ P HY+ M
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 491 VDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE-NVKLGEFAANKLLELESEN 549
VD+LG++G++ +A++LI MP + V+W LL C H NV++ E A LL L+ ++
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 764
Query: 550 DGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQS 609
+YTLLSN+YA+A W+ V+ +R M+ +KK PGCSWV+ K F VGD+ HP+
Sbjct: 765 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 824
Query: 610 ERMYAILTELIQRIK 624
E +Y L + +K
Sbjct: 825 EEIYEELGLIYSEMK 839
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 223/419 (53%), Gaps = 40/419 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ +V V NA + MYG+C AL A ++FDEM + D VSWN+++AA+ Q+G L
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR---DAVSWNAIIAAHEQNGKGYETLF 427
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF M+ I+ D + ++L A + GS +G ++H V+SG+ + VG SL+D
Sbjct: 428 LFVS---MLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLID 483
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCGM+ EA K+ R ++ VS G E E+M + ++ VS
Sbjct: 484 MYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEE----LEKMHNKRLQEMCVS 528
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+++I+GY K +A +F +M P++ T ++L CA++ + GK+ H I
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K L Q ++ + + ++DMY+KC + +R +F+ +D VTW AMI GYA H
Sbjct: 589 KKEL------QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD--FVTWNAMICGYAHH 640
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY--DSD 380
G+ ++++LF +M+ ++ +KPN T L ACA + + G E + Y+++ Y D
Sbjct: 641 GKGEEAIQLFERMILEN--IKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQ 697
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEE 438
+ + +N ++D KSG + A + M + + V W +L+ +H V+V EE
Sbjct: 698 LPHYSN-MVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH---RNNVEVAEE 752
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 249/529 (47%), Gaps = 81/529 (15%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+++V +A++ MY + + ++F + + + VSW++++A VQ+ AL
Sbjct: 170 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEK---NSVSWSAIIAGCVQNNLLSLALKF 226
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+ EM V+ + +VL + A++ G Q+H A++S D V + +DM
Sbjct: 227 FK---EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
YAKC M +A +F+ + + S+NAM+TGYS +EE+
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYS---------------QEEH-------- 320
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
G++AL +F ++ S +E++L + CA V L G + + IK
Sbjct: 321 ------------GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
L+ D C V NA IDMY KC++++ A +FD + + R+ V+W A+I + Q+G
Sbjct: 369 SSLSLDVC------VANAAIDMYGKCQALAEAFRVFDEM--RRRDAVSWNAIIAAHEQNG 420
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+ ++L LF ML+ ++P+ FT L AC +L G EIH+ ++++ S+
Sbjct: 421 KGYETLFLFVSMLRS--RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNS-S 476
Query: 384 VANCLIDTYSKSGDIDVARVV----------------FDNMKHKN----AVSWTSLITGY 423
V LID YSK G I+ A + + M +K VSW S+I+GY
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK-YFSCMSKEYGVIP 482
M Q E+A +F M + G+ PD T+ +L C++ G + + + KE
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL---- 592
Query: 483 GEEHYAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ Y C +VD+ + G L + + E ++ V W A++ G H
Sbjct: 593 QSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHH 640
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 227/509 (44%), Gaps = 79/509 (15%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
FV N ++ +Y A +FD+M + D+VSWN M+ Y +S D A F
Sbjct: 40 TTFVLNCLLQVYTNSRDFVSASMVFDKM---PLRDVVSWNKMINGYSKSNDMFKANSFFN 96
Query: 86 KM-------W---------------------EMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
M W +M I+ D + +L + +
Sbjct: 97 MMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL 156
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G Q+HG VR G DV ++L+DMYAK E+ +VF+ + +K+ VSW+A++ G
Sbjct: 157 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 216
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+ AL F++M++ N AG +Q
Sbjct: 217 NNLLSLALKFFKEMQKVN------------AGVSQS-----------------------I 241
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
S+L CA++ L G + H + +K D +V A +DMY KC ++ A+
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADG------IVRTATLDMYAKCDNMQDAQI 295
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD+ ++ N ++ AMI GY+Q +L LF +++ + + ++S ACA
Sbjct: 296 LFDN--SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS--GLGFDEISLSGVFRACA 351
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
+ L G +I+ +++ DV VAN ID Y K + A VFD M+ ++AVSW
Sbjct: 352 LVKGLSEGLQIYGLAIKSSLSLDVC-VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 410
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
++I + +G+G E + +F M + + PD TF +L AC+ G + G++ S + K
Sbjct: 411 AIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS 469
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
G+ ++D+ + G +++A K+
Sbjct: 470 -GMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 209/421 (49%), Gaps = 27/421 (6%)
Query: 110 ASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWN 169
A G+ GKQ H + SG FV N L+ +Y AS VF++M +DVVSWN
Sbjct: 17 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 76
Query: 170 AMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSC 229
M+ GYS A + F M DVVSW+++++GY Q G +++ VF M
Sbjct: 77 KMINGYSKSNDMFKANSFFNMMPVR----DVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132
Query: 230 HSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKC 289
+ + T +L C+ + G + H ++ CD D ++ +A++DMY K
Sbjct: 133 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-----GCDTD-VVAASALLDMYAKG 186
Query: 290 KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTI 349
K + +F + K N V+W+A+I G Q+ + +L+ F +M K + V + +
Sbjct: 187 KRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY-- 242
Query: 350 SCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK 409
+ L +CA L+ LR G ++HA+ L++ + +D + V +D Y+K ++ A+++FDN +
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSE 301
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
+ N S+ ++ITGY G +A+ +F + GL D I+ + AC+ + EG++
Sbjct: 302 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 361
Query: 470 YF-----SCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+ S +S + V +D+ G+ L +A ++ + M + V W A+++
Sbjct: 362 IYGLAIKSSLSLDVCVANAA------IDMYGKCQALAEAFRVFDEMRRRDA-VSWNAIIA 414
Query: 525 G 525
Sbjct: 415 A 415
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 30/222 (13%)
Query: 245 CASVGALIHGKETHCYTI-----------KCILN--------------YDRCDQDELLVI 279
CA GAL GK+ H + I C+L +D+ +++
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
N +I+ Y+K + A + F+ + +D VV+W +M+ GY Q+GE+ S+E+F M ++
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRD--VVSWNSMLSGYLQNGESLKSIEVFVDMGRE- 132
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
++ + T + L C+ L G +IH V+R D+DV+ A+ L+D Y+K
Sbjct: 133 -GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV-AASALLDMYAKGKRFV 190
Query: 400 VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ VF + KN+VSW+++I G + A+K F+EM+K
Sbjct: 191 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK 232
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 40/241 (16%)
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA+ AL G++ HA+++ + + +V NCL+ Y+ S D A +VFD M ++ VS
Sbjct: 16 CAKQGALELGKQAHAHMIISGF-RPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVS 74
Query: 416 WT-------------------------------SLITGYGMHGQGEEAVKVFEEMRKEGL 444
W S+++GY +G+ ++++VF +M +EG+
Sbjct: 75 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 134
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
DG TF ++L CS G++ + + G + ++D+ + R +++
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
++ +G+P K V W A+++GC ++ + L A E++ N G + +IYA+
Sbjct: 194 RVFQGIPEK-NSVSWSAIIAGCVQNNLLSL---ALKFFKEMQKVNAG---VSQSIYASVL 246
Query: 565 R 565
R
Sbjct: 247 R 247
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 329/595 (55%), Gaps = 53/595 (8%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V V +++V MY + +++ Q+FDEM + D+ SWN++++ + QSG+ + AL LF
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPER---DVASWNTVISCFYQSGEAEKALELFG 197
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + ++VSL + A + + GK++H V+ G D +V ++LVDMY
Sbjct: 198 RME---SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYG 254
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC + A +VF++M +K +V +W++
Sbjct: 255 KCDCLEVAREVFQKMPRKSLV-----------------------------------AWNS 279
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I GY KG + + +M ++P++ TL S+L C+ L+HGK H Y I+ +
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+N D + V ++ID+Y KC ++A +F S KD +W MI Y G
Sbjct: 340 VNAD------IYVNCSLIDLYFKCGEANLAETVF-SKTQKDV-AESWNVMISSYISVGNW 391
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
++E++ QM+ VKP+ T + L AC++LAAL G++IH + ++ ++D L ++
Sbjct: 392 FKAVEVYDQMVSV--GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
L+D YSK G+ A +F+++ K+ VSWT +I+ YG HGQ EA+ F+EM+K GL
Sbjct: 450 -ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
PDG+T L +L AC H+G++DEG+K+FS M +YG+ P EHY+CM+D+LGRAGRL +A +
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 506 LIEGMPMKPGQVVWVA-LLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
+I+ P ++ L S C H LG+ A L+E ++ +Y +L N+YA+
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTEL 619
W R+R MK G++K+PGCSW++ FF DR+H ++E +Y L L
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 270/544 (49%), Gaps = 63/544 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVS----WNSMVAAYVQSGDTK 78
L +V +C +++ +Y C AR +F E FD+ S WNS+++ Y ++
Sbjct: 35 LRRDVVLCKSLINVYFTCKDHCSARHVF------ENFDIRSDVYIWNSLMSGYSKNSMFH 88
Query: 79 SALGLFQKMWEMVDVDIQL-DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
L +F+++ ++ I + D+ + NV+ A+ ++G + G+ +H V+SG DV V
Sbjct: 89 DTLEVFKRL---LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+SLV MYAK + + +VF+ M ++DV SWN +++ + G E AL LF +M E
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
PN V+L +S C+ + L GKE
Sbjct: 206 -----------------------------------PNSVSLTVAISACSRLLWLERGKEI 230
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H KC+ D+ V +A++DMY KC + VAR +F + K ++V W +MI
Sbjct: 231 H---RKCVKKGFELDE---YVNSALVDMYGKCDCLEVAREVFQKMPRK--SLVAWNSMIK 282
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
GY G++ +E+ ++M+ + +P+ T++ LMAC+R L G+ IH YV+R+
Sbjct: 283 GYVAKGDSKSCVEILNRMIIE--GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVV 340
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE 437
++D+ YV LID Y K G+ ++A VF + A SW +I+ Y G +AV+V++
Sbjct: 341 NADI-YVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
+M G+ PD +TF +L ACS +++G + +S E + E + ++D+ +
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRLETDELLLSALLDMYSKC 458
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLS 557
G +A ++ +P K V W ++S H + + +++ + + DG TLL+
Sbjct: 459 GNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG-VTLLA 516
Query: 558 NIYA 561
+ A
Sbjct: 517 VLSA 520
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 46/344 (13%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K VH + GL DV + SL+++Y C A VFE
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF------------------ 65
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH-SKPNEVT 237
+I DV W+++++GY++ + ++ L VF+++ +C P+ T
Sbjct: 66 ----------------DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFT 109
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+++ ++G G+ H +K + CD ++V ++++ MY K +
Sbjct: 110 FPNVIKAYGALGREFLGRMIHTLVVK---SGYVCD---VVVASSLVGMYAKFNLFENSLQ 163
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD + +R+V +W +I + Q GEA +LELF +M + +PN+ +++ ++ AC+
Sbjct: 164 VFDEMP--ERDVASWNTVISCFYQSGEAEKALELFGRM--ESSGFEPNSVSLTVAISACS 219
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
RL L G+EIH ++ ++ D YV + L+D Y K ++VAR VF M K+ V+W
Sbjct: 220 RLLWLERGKEIHRKCVKKGFELDE-YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
S+I GY G + V++ M EG P T +L ACS S
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 8/208 (3%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSA 80
V+N++++V +++ +Y +CG + A +F + K D+ SWN M+++Y+ G+ A
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK----DVAESWNVMISSYISVGNWFKA 394
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ ++ +MV V ++ D V+ +VLPA + + + GKQ+H S L D + ++L
Sbjct: 395 VEVYD---QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+DMY+KCG EA ++F + KKDVVSW M++ Y G AL F++M++ ++ D
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQS 228
V+ V++ GL E L F QM+S
Sbjct: 512 VTLLAVLSACGHAGLIDEGLKFFSQMRS 539
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 352 bits (903), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 332/643 (51%), Gaps = 85/643 (13%)
Query: 118 GKQVHGFAVRSGLFE--DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGY 175
GK++H SGL + ++ N+L YA G M A K+F+ +
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS------------ 72
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
E D V W+T+++ +++ GL ++ +F +M+ + ++
Sbjct: 73 ---------------------EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDD 111
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKC-ILNYDRCDQDELLVINAIIDMYTKCKSISV 294
V++V L CA + L ++ H +K +L + V NA++DMY KC +S
Sbjct: 112 VSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT-------SVKVCNALMDMYGKCGLVSE 164
Query: 295 ARAIFDSVAPK-----------------------------DRNVVTWTAMIGGYAQHGEA 325
+ IF+ + K +RN V WT M+ GY G
Sbjct: 165 VKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFT 224
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLM-ACARLAALRSGREIHAYVLRNQY------D 378
+ LEL ++M+ R F CS++ ACA+ L GR +H Y L+ +
Sbjct: 225 REVLELLAEMVF--RCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
D + V L+D Y+K G+ID + VF M+ +N V+W +L +G MHG+G + +F +
Sbjct: 283 YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M +E + PD +TF +L ACSHSG+VDEG + F + + YG+ P +HYACMVDLLGRAG
Sbjct: 343 MIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSN 558
+++A L+ MP+ P +VV +LL C H V++ E +L+++ N L+SN
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTE 618
+Y R +R ++ GI+K PG S + F GDR+HP+++ +Y L E
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNE 520
Query: 619 LIQRIKVLGYVPETS--FALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNL 676
+I+RI+ GYVP+ S + + D EEK L HSEKLA+ +G+L + P P+ + KNL
Sbjct: 521 VIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNL 580
Query: 677 RVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
R+C DCH+A+ +S + EII+RD +RFH FK GSCSC +YW
Sbjct: 581 RICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 219/419 (52%), Gaps = 25/419 (5%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
++ NA+ Y G + A+++FDE+ SE D V W ++++++ + G +++ LF
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEK-DNVDWTTLLSSFSRYGLLVNSMKLFV-- 100
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
EM +++D VS+V + A + F +Q HG AV+ G+ V V N+L+DMY KC
Sbjct: 101 -EMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G++ E ++FE +++K VVSW ++ E +F +M E N V+W+ ++
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERN----AVAWTVMV 215
Query: 208 AGYAQKGLGYEALNVFRQMQ-SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC-I 265
AGY G E L + +M C N VTL S+LS CA G L+ G+ H Y +K +
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM 275
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ + D+++V A++DMY KC +I + +F + + RNVVTW A+ G A HG+
Sbjct: 276 MMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM--RKRNVVTWNALFSGLAMHGKG 333
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-REIHA---YVLRNQYDSDV 381
+++F QM+ R VKP+ T + L AC+ + G R H+ Y L + D
Sbjct: 334 RMVIDMFPQMI---REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDH-- 388
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
C++D ++G I+ A ++ M N V SL+ +HG+ E A ++ E+
Sbjct: 389 ---YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 75/298 (25%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKS----------------------EIF--- 59
++V VCNA++ MYG+CG + +++F+E+ + E+F
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 60 ---DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWW 116
+ V+W MVA Y+ +G T+ L L +M + L+ V+L ++L A A G+
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEM--VFRCGHGLNFVTLCSMLSACAQSGNLV 261
Query: 117 FGKQVHGFAVRSGL-------FEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWN 169
G+ VH +A++ + ++DV VG +LVDMYAKCG + + VF M+K++VV+WN
Sbjct: 262 VGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWN 321
Query: 170 AMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ---- 225
A+ +G + G + +F QM E ++ D ++++ V++ + G+ E F
Sbjct: 322 ALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFY 380
Query: 226 ----------------------------MQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
M+ PNEV L SLL C+ +HGK
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS-----VHGK 433
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 353 LMACARLAALRSGREIHAYVLRNQY-DSDVLYVANCLIDTYSKSGDIDVARVVFDN--MK 409
L CA + LR G+E+HA + + + Y++N L Y+ SG++ A+ +FD +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH---SGMVDE 466
K+ V WT+L++ + +G ++K+F EMR++ + D ++ + + C+ G +
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
G ++ + GV+ + ++D+ G+ G + + ++ E + K V W +L
Sbjct: 133 G----HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDTV 187
Query: 527 RKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHT---GIKK 583
K E ++ G + E+ N ++T++ Y A ++V + + M G+
Sbjct: 188 VKWEGLERGREVFH---EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNF 244
Query: 584 RPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
CS + + VG H +YA+ E++
Sbjct: 245 VTLCSMLSACAQSGNLVVGRWVH-----VYALKKEMM 276
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 220/691 (31%), Positives = 348/691 (50%), Gaps = 96/691 (13%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N +V Y +CG L A +F+ + D+VSWNS++ Y Q+G S+ + Q EM
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICK---DVVSWNSLITGYSQNGGISSSYTVMQLFREM 109
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM------- 143
DI +A +L + A +S+ S G+Q H V+ F D++V SLV M
Sbjct: 110 RAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLV 169
Query: 144 ------------------------YAKCGMMHEASKVF-----ERMQKKD---------- 164
YA G + EA KVF E+ + D
Sbjct: 170 EDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLS 229
Query: 165 --------------------------VVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
V NA+VT YS A +F+ + N
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN--- 286
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
++WS ++ GY+Q G EA+ +F +M S KP+E T+V +L+ C+ + L GK+ H
Sbjct: 287 -SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLH 345
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
+ +K L ++R L A++DMY K ++ AR FD + ++R+V WT++I G
Sbjct: 346 SFLLK--LGFER----HLFATTALVDMYAKAGCLADARKGFDCL--QERDVALWTSLISG 397
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
Y Q+ + ++L L+ +M + + PN T++ L AC+ LA L G+++H + +++ +
Sbjct: 398 YVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFG 455
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
+V + + L YSK G ++ +VF +K+ VSW ++I+G +GQG+EA+++FEE
Sbjct: 456 LEVP-IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M EG+ PD +TF+ ++ ACSH G V+ G YF+ MS + G+ P +HYACMVDLL RAG
Sbjct: 515 MLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAG 574
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSN 558
+L +A + IE + G +W LLS C+ H +LG +A KL+ L S +Y LS
Sbjct: 575 QLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSG 634
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTE 618
IY R +DV R+ M+ G+ K GCSW++ K F VGD HP E ++
Sbjct: 635 IYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCL 694
Query: 619 LIQRIKVLGYVP--ETSFALHDVDDEEKGDL 647
+ +++ G+V ++SF V++EE L
Sbjct: 695 VSRQMIEEGFVTVLDSSF----VEEEEGTQL 721
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 253/534 (47%), Gaps = 125/534 (23%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G+ VHG +R+G + N LV+ YAKCG + +A +F + KDVVSWN+++TGYS
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 178 IGMFENALT---LFEQMREENIEL-----------------------------------D 199
G ++ T LF +MR ++I D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA------------- 246
+ ++++ Y + GL + L VF M + N T +++SG A
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYM----PERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 247 ---------------------SVGALIH---GKETHCYTIK-CILNYDRCDQDELLVINA 281
S+ A I+ G++ HC TIK +L + + + NA
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF-------VALSNA 261
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
++ MY+KC+S++ A +FDS DRN +TW+AM+ GY+Q+GE+ ++++LFS+M
Sbjct: 262 LVTMYSKCESLNEACKMFDS--SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA--G 317
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+KP+ +TI L AC+ + L G+++H+++L+ ++ L+ L+D Y+K+G + A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH-LFATTALVDMYAKAGCLADA 376
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
R FD ++ ++ WTSLI+GY + EEA+ ++ M+ G++P+ T +L ACS
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 462 GMVDEGIK-----------------------YFSCMSKEYGVI-----PGEE--HYACMV 491
++ G + Y C S E G + P ++ + M+
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMI 496
Query: 492 DLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKLGEFAANKL 542
L G+ D+A++L E M M+P V +V ++S C V+ G F N +
Sbjct: 497 SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 209/421 (49%), Gaps = 58/421 (13%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V + NA+VTMY +C +L+ A +MFD S + ++W++MV Y Q+G++ A+ LF +
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFD---SSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M+ I+ ++V VL A + + GKQ+H F ++ G +F +LVDMYAK
Sbjct: 313 MF---SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G + +A K F+ +Q++DV W ++++GY E AL L+ +M+ I
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI---------- 419
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
PN+ T+ S+L C+S+ L GK+ H +TIK
Sbjct: 420 -------------------------IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGF 454
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
E+ + +A+ MY+KC S+ +F KD VV+W AMI G + +G+ +
Sbjct: 455 GL------EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD--VVSWNAMISGLSHNGQGD 506
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ--YDSDVLYV 384
++LELF +ML + ++P+ T + AC+ + G + ++ +Q D V +
Sbjct: 507 EALELFEEMLAE--GMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHY 563
Query: 385 ANCLIDTYSKSGDIDVARVVFD--NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
A C++D S++G + A+ + N+ H + W L++ HG+ E V E++
Sbjct: 564 A-CMVDLLSRAGQLKEAKEFIESANIDHGLCL-WRILLSACKNHGKCELGVYAGEKLMAL 621
Query: 443 G 443
G
Sbjct: 622 G 622
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%), Gaps = 6/190 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++F A+V MY + G L AR+ FD + + D+ W S+++ YVQ+ D + AL L++
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQER---DVALWTSLISGYVQNSDNEEALILYR 412
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M I + ++ +VL A +S+ + GKQVHG ++ G +V +G++L MY+
Sbjct: 413 RM---KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + + + VF R KDVVSWNAM++G SH G + AL LFE+M E +E D V++
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 206 VIAGYAQKGL 215
+I+ + KG
Sbjct: 530 IISACSHKGF 539
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 10/189 (5%)
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+ P+ T+ L ++ L +GR +H ++R + + + AN L++ Y+K G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQH-ANVLVNFYAKCGKLAKA 68
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHG---QGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
+F+ + K+ VSW SLITGY +G +++F EMR + +LP+ T + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 459 S--HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
S S V +G I + +V + +AG ++ +K+ MP +
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVD---TSLVGMYCKAGLVEDGLKVFAYMPER-NT 184
Query: 517 VVWVALLSG 525
W ++SG
Sbjct: 185 YTWSTMVSG 193
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/597 (35%), Positives = 313/597 (52%), Gaps = 53/597 (8%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+VFV A V M+ +C ++D+A ++F+ M + D +WN+M++ + QSG T A LF
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPER---DATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+ EM +I D+V+++ ++ + + S + +H +R G+ V V N+ + Y
Sbjct: 142 R---EMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 145 AKCGMMHEASKVFERMQKKD--VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
KCG + A VFE + + D VVSWN+M YS G +A L+ M E
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF------ 252
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
KP+ T ++L + C + L G+ H + I
Sbjct: 253 -----------------------------KPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
DQD + IN I MY+K + AR +FD + R V+WT MI GYA+
Sbjct: 284 HL-----GTDQD-IEAINTFISMYSKSEDTCSARLLFDIMT--SRTCVSWTVMISGYAEK 335
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G+ +++L LF M+K KP+ T+ + C + +L +G+ I A D +
Sbjct: 336 GDMDEALALFHAMIKSGE--KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ N LID YSK G I AR +FDN K V+WT++I GY ++G EA+K+F +M
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
P+ ITFL +L AC+HSG +++G +YF M + Y + PG +HY+CMVDLLGR G+L++
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A++LI M KP +W ALL+ C+ H NVK+ E AA L LE + Y ++NIYA
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTEL 619
A W RIRS+MK IKK PG S +Q +F VG+ H ++E +Y L L
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 216/465 (46%), Gaps = 52/465 (11%)
Query: 63 SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVH 122
+WN + V D +L LF+ EM + + + V A A + + VH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFR---EMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 123 GFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE 182
++S + DVFVG + VDM+ KC + A+KVFERM ++
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER------------------- 116
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
D +W+ +++G+ Q G +A ++FR+M+ P+ VT+++L+
Sbjct: 117 ----------------DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
Query: 243 SGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV 302
+ +L + H I+ ++ ++ V N I Y KC + A+ +F+++
Sbjct: 161 QSASFEKSLKLLEAMHAVGIRLGVDV------QVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 303 APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
DR VV+W +M Y+ GEA D+ L+ ML+++ KP+ T +C L
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE--FKPDLSTFINLAASCQNPETL 272
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
GR IH++ + D D+ + N I YSKS D AR++FD M + VSWT +I+G
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
Y G +EA+ +F M K G PD +T L ++ C G ++ G K+ + YG
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGC-K 389
Query: 483 GEEHYAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ C ++D+ + G + +A + + P K V W +++G
Sbjct: 390 RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT-VVTWTTMIAG 433
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 166/373 (44%), Gaps = 46/373 (12%)
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
V +W+ I + E+L +FR+M+ +PN T + CA + + + H
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+ IK D + V A +DM+ KC S+ A +F+ + +R+ TW AM+ G+
Sbjct: 77 HLIKSPFWSD------VFVGTATVDMFVKCNSVDYAAKVFERMP--ERDATTWNAMLSGF 128
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
Q G + + LF +M + + P++ T+ + + + +L+ +HA +R D
Sbjct: 129 CQSGHTDKAFSLFREMRLNE--ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKH--KNAVSWTSLITGYGMHGQGEEAVKVFE 437
V VAN I TY K GD+D A++VF+ + + VSW S+ Y + G+ +A ++
Sbjct: 187 QVT-VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEG------------------IKYFSCMSKE-- 477
M +E PD TF+ + +C + + +G I F M +
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 478 --------YGVIPGEE--HYACMVDLLGRAGRLDKAMKLIEGMPM---KPGQVVWVALLS 524
+ ++ + M+ G +D+A+ L M KP V ++L+S
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 525 GCRKHENVKLGEF 537
GC K +++ G++
Sbjct: 366 GCGKFGSLETGKW 378
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ ++ N ++MY + AR +FD M VSW M++ Y + GD AL L
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC---VSWTVMISGYAEKGDMDEALAL 344
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFED-VFVGNSLVD 142
F M + + D V+L++++ GS GK + A G D V + N+L+D
Sbjct: 345 FHAM---IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALID 401
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG +HEA +F+ +K VV+W M+ GY+ G+F AL LF +M I+LD
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM----IDLDY-- 455
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE-----T 257
KPN +T +++L CA G+L G E
Sbjct: 456 -----------------------------KPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 258 HCYTIKCILNYDRCDQDEL 276
Y I L++ C D L
Sbjct: 487 QVYNISPGLDHYSCMVDLL 505
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+V W I + +SL LF +M + +PN FT ACARLA +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRG--GFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHG 427
+HA+++++ + SDV +V +D + K +D A VF+ M ++A +W ++++G+ G
Sbjct: 74 VHAHLIKSPFWSDV-FVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 428 QGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY 487
++A +F EMR + PD +T + ++ + S ++ +K M G+ G +
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAM-HAVGIRLGVDVQ 187
Query: 488 ACM----VDLLGRAGRLDKAMKLIEGM 510
+ + G+ G LD A + E +
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAI 214
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 216/628 (34%), Positives = 334/628 (53%), Gaps = 49/628 (7%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
++++Y R G L AR +F+ + + DL WNS++ A V G ++AL L++ M +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR-- 152
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
+ D L +L A +G + + H ++ GL E++ V N L+ +Y K G M +
Sbjct: 153 -GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A +F M ++ +SWN M+ G+S E+A+ +FE M+ E + D V+W++V++ ++Q
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
G + L F M+ + + L S CA + AL ++ H Y IK
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGF------ 325
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPK--------------------------- 305
++ L NA+I +Y K + A +F + K
Sbjct: 326 EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSE 385
Query: 306 ----------DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
NVVTWT++I G G +DSLE F QM Q V N+ TI C L
Sbjct: 386 LEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM--QFSKVLANSVTICCILSI 443
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA L AL GREIH +V+R ++L V N L++ Y+K G + +VF+ ++ K+ +S
Sbjct: 444 CAELPALNLGREIHGHVIRTSMSENIL-VQNALVNMYAKCGLLSEGSLVFEAIRDKDLIS 502
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W S+I GYGMHG E+A+ +F+ M G PDGI + +L ACSH+G+V++G + F MS
Sbjct: 503 WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMS 562
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
K +G+ P +EHYAC+VDLLGR G L +A ++++ MPM+P V ALL+ CR H+NV +
Sbjct: 563 KRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIA 622
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
E A++L LE E GSY LLSNIY+ RW++ +R+L K +KK G SW++ KK
Sbjct: 623 EGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKK 682
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRI 623
F G + E +Y +L +L+ +
Sbjct: 683 KYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 39/232 (16%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
NA++ +YG+ G + A +F ++ I SWNS++ ++V +G AL LF ++ EM
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGI---ESWNSLITSFVDAGKLDEALSLFSELEEM 389
Query: 91 VDV------------------------------------DIQLDAVSLVNVLPAFASMGS 114
V + ++V++ +L A + +
Sbjct: 390 NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPA 449
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
G+++HG +R+ + E++ V N+LV+MYAKCG++ E S VFE ++ KD++SWN+++ G
Sbjct: 450 LNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKG 509
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM 226
Y G E AL++F++M D ++ V++ + GL + +F M
Sbjct: 510 YGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSM 561
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ N+ V NA+V MY +CG L +F+ + DL+SWNS++ Y G + AL
Sbjct: 465 MSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK---DLISWNSIIKGYGMHGFAEKALS 521
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV-HGFAVRSGLFEDVFVGNSLV 141
+F +M + D ++LV VL A + G G+++ + + R GL +V
Sbjct: 522 MFDRM---ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIV 578
Query: 142 DMYAKCGMMHEASKVFERM 160
D+ + G + EAS++ + M
Sbjct: 579 DLLGRVGFLKEASEIVKNM 597
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK---HKNAVSWTSLITG 422
R++HA VL + + +A LI Y++ G + AR VF+ + + W S++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI-KYFSCMSKEYGVI 481
HG E A++++ MR+ GL DG ++L AC + G G+ + F + G+
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF--GLCRAFHTQVIQIGLK 190
Query: 482 PGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN----VKLGEF 537
++ L +AGR+ A L MP++ ++ W ++ G + + VK+ E+
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTG 580
+ + ++ ++T + + ++ +++DV + LM+ +G
Sbjct: 250 MQREEFK---PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 340/622 (54%), Gaps = 58/622 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++ N +V+ + + G ++ AR +FDEM D+V+W +M+ Y S A F
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDR---DVVAWTAMITGYASSNYNARAWECFH 100
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EMV + +L +VL + +M +G VHG V+ G+ ++V N++++MYA
Sbjct: 101 ---EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
C + EA A +F ++ +N V+W+T
Sbjct: 158 TCSVTMEA------------------------------ACLIFRDIKVKND----VTWTT 183
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I G+ G G L +++QM +++ + + AS+ ++ GK+ H IK
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIK-- 241
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
R Q L V+N+I+D+Y +C +S A+ F + +D++++TW +I + ++
Sbjct: 242 ----RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM--EDKDLITWNTLISEL-ERSDS 294
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+++L +F + + + PN +T + + ACA +AAL G+++H + R ++ +V +A
Sbjct: 295 SEALLMFQRF--ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNV-ELA 351
Query: 386 NCLIDTYSKSGDI-DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N LID Y+K G+I D RV + + +N VSWTS++ GYG HG G EAV++F++M G+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD I F+ +L AC H+G+V++G+KYF+ M EYG+ P + Y C+VDLLGRAG++ +A
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHE-NVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
+L+E MP KP + W A+L C+ H+ N + AA K++EL+ + G+Y +LS IYA
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE 531
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRI 623
+W D R+R +M+ G KK G SW+ + +F V D+ P + +Y++L LI+
Sbjct: 532 GKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEET 591
Query: 624 KVLGYVPETSFALHDVDDEEKG 645
+ GYVPE V+D+E G
Sbjct: 592 REAGYVPELDSL---VNDQEVG 610
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 199/410 (48%), Gaps = 61/410 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCG-ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ +++V NA++ MY C ++ A +F ++ ++ + V+W +++ + GD L
Sbjct: 142 MEGSLYVDNAMMNMYATCSVTMEAACLIFRDI---KVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+++ +M+ + ++ + + A AS+ S GKQ+H ++ G ++ V NS++
Sbjct: 199 KMYK---QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSIL 255
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
D+Y +CG + EA F M+ KD+++WN +++ EL+
Sbjct: 256 DLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-----------------------ELERS 292
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
S EAL +F++ +S PN T SL++ CA++ AL G++ H
Sbjct: 293 DSS-------------EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ R + + NA+IDMY KC +I ++ +F + + RN+V+WT+M+ GY
Sbjct: 340 FR------RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR-RNLVSWTSMMIGYGS 392
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY---- 377
HG +++ELF +M+ ++P+ L AC + G + + V+ ++Y
Sbjct: 393 HGYGAEAVELFDKMVSS--GIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVMESEYGINP 449
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMH 426
D D+ NC++D ++G I A + + M K + +W +++ H
Sbjct: 450 DRDIY---NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 332/603 (55%), Gaps = 64/603 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ ++ + +++ C + A ++F+++ + + NS++ A+ Q+ A
Sbjct: 47 LHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVH---LCNSLIRAHAQNSQPYQAFF 103
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFG--KQVHGFAVRSGLFEDVFVGNSL 140
+F EM + D + +L A + G W K +H + GL D++V N+L
Sbjct: 104 VFS---EMQRFGLFADNFTYPFLLKACS--GQSWLPVVKMMHNHIEKLGLSSDIYVPNAL 158
Query: 141 VDMYAKCGMM--HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
+D Y++CG + +A K+FE+M ++D VSWN+M+ G G +A LF++M +
Sbjct: 159 IDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR---- 214
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
D++SW+T++ GYA+ +A +F +M + N V+ +++ G
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKM----PERNTVSWSTMVMG-------------- 256
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
Y+K + +AR +FD + +NVVTWT +I G
Sbjct: 257 ---------------------------YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
YA+ G ++ L QM+ +K +A + L AC L G IH+ + R+
Sbjct: 290 YAEKGLLKEADRLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
S+ YV N L+D Y+K G++ A VF+++ K+ VSW +++ G G+HG G+EA+++F
Sbjct: 348 SNA-YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
MR+EG+ PD +TF+ +L +C+H+G++DEGI YF M K Y ++P EHY C+VDLLGR G
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVG 466
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSN 558
RL +A+K+++ MPM+P V+W ALL CR H V + + + L++L+ + G+Y+LLSN
Sbjct: 467 RLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTE 618
IYA A W+ V IRS MK G++K G S V+ + G F V D++HP+S+++Y +L
Sbjct: 527 IYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGS 586
Query: 619 LIQ 621
LI+
Sbjct: 587 LIE 589
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 225/501 (44%), Gaps = 70/501 (13%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF---------------------- 59
V NV +CN+++ + + A +F EM + +F
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 60 --------------DLVSWNSMVAAYVQSG--DTKSALGLFQKMWEMVDVDIQLDAVSLV 103
D+ N+++ Y + G + A+ LF+KM E D VS
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-------DTVSWN 189
Query: 104 NVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK 163
++L G +++ + D+ N+++D YA+C M +A ++FE+M ++
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQ----RDLISWNTMLDGYARCREMSKAFELFEKMPER 245
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
+ VSW+ MV GYS G E A +F++M +VV+W+ +IAGYA+KGL EA +
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 224 RQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAII 283
QM + K + ++S+L+ C G L G H + L + V+NA++
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNA------YVLNALL 357
Query: 284 DMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVK 343
DMY KC ++ A +F+ + KD +V+W M+ G HG +++ELFS+M ++ ++
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKD--LVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIR 413
Query: 344 PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN--CLIDTYSKSGDIDVA 401
P+ T L +C + G + + Y + YD V V + CL+D + G + A
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDL-VPQVEHYGCLVDLLGRVGRLKEA 471
Query: 402 RVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVMLYACS 459
V M N V W +L+ MH + + A +V + + K + P + L +YA +
Sbjct: 472 IKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
Query: 460 HSGMVDEGIKYFSCMSKEYGV 480
EG+ K GV
Sbjct: 532 EDW---EGVADIRSKMKSMGV 549
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 346 bits (887), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 302/543 (55%), Gaps = 16/543 (2%)
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF-RQMQSCHSKPNEVT 237
G +A LF+ + D W+ +I G++ ++ + R + S S+P+ T
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSD---WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFT 109
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
L C + ++ E H I+ D+ +V +++ Y+ S+ +A
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGF------LDDAIVATSLVRCYSANGSVEIASK 163
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD + +D +V+W MI ++ G N +L ++ +M + V +++T+ L +CA
Sbjct: 164 VFDEMPVRD--LVSWNVMICCFSHVGLHNQALSMYKRM--GNEGVCGDSYTLVALLSSCA 219
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
++AL G +H + +S V +V+N LID Y+K G ++ A VF+ M+ ++ ++W
Sbjct: 220 HVSALNMGVMLHRIACDIRCESCV-FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWN 278
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
S+I GYG+HG G EA+ F +M G+ P+ ITFL +L CSH G+V EG+++F MS +
Sbjct: 279 SMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
+ + P +HY CMVDL GRAG+L+ ++++I V+W LL C+ H N++LGE
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV 398
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTA 597
A KL++LE+ N G Y L+++IY+ A + +R L++ ++ PG SW++
Sbjct: 399 AMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVH 458
Query: 598 TFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETS-FALHDVDDEEKGDLLFDHSEKLA 656
F V D+ HP+S +Y+ L E+I R + GY PE S + D G HSEKLA
Sbjct: 459 KFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLA 518
Query: 657 LAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCR 716
+AYG++ + G +RITKNLRVC DCH+ Y+S EII+RD RFHHF +G CSC
Sbjct: 519 IAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCN 578
Query: 717 NYW 719
+YW
Sbjct: 579 DYW 581
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 55/404 (13%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
G+L HA+ +FD WN ++ + S +++ + +M ++ + D
Sbjct: 53 GSLSHAQLLFDHFDSDP--STSDWNYLIRGFSNSSSPLNSILFYNRM--LLSSVSRPDLF 108
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+ L + + S ++HG +RSG +D V SLV Y+ G + ASKVF+ M
Sbjct: 109 TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
+D+VSWN M+ +SH+G+ AL+++++M E + D
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGD--------------------- 207
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
TLV+LLS CA V AL G H I C + + C + V N
Sbjct: 208 --------------SYTLVALLSSCAHVSALNMGVMLH--RIACDIRCESC----VFVSN 247
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
A+IDMY KC S+ A +F+ + + R+V+TW +MI GY HG +++ F +M+
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGM--RKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS-- 303
Query: 341 SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-SDVLYVANCLIDTYSKSGDID 399
V+PNA T L+ C+ ++ G E H ++ +Q+ + + C++D Y ++G ++
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 400 VA-RVVFDNMKHKNAVSWTSLITGYGMHGQ---GEEAVKVFEEM 439
+ +++ + H++ V W +L+ +H GE A+K ++
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 7/210 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+ V ++V Y G+++ A ++FDEM + DLVSWN M+ + G AL +++
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEM---PVRDLVSWNVMICCFSHVGLHNQALSMYK 197
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + + D+ +LV +L + A + + G +H A VFV N+L+DMYA
Sbjct: 198 RMG---NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 254
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + A VF M+K+DV++WN+M+ GY G A++ F +M + + +++
Sbjct: 255 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 314
Query: 206 VIAGYAQKGLGYEALNVFRQMQS-CHSKPN 234
++ G + +GL E + F M S H PN
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPN 344
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S VFV NA++ MY +CG+L++A +F+ M K D+++WNSM+ Y G A+ F
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKR---DVLTWNSMIIGYGVHGHGVEAISFF 297
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE---DVFVGNSLV 141
+K MV ++ +A++ + +L + G + V F + S F +V +V
Sbjct: 298 RK---MVASGVRPNAITFLGLLLGCSHQG--LVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 142 DMYAKCGMMHEASK-VFERMQKKDVVSWNAMV 172
D+Y + G + + + ++ +D V W ++
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 200/605 (33%), Positives = 327/605 (54%), Gaps = 28/605 (4%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
G + +A ++F ++ + D+V WN+M+ + + + L+ M+ + D+
Sbjct: 82 GHVSYAYKLFVKIPEP---DVVVWNNMIKGWSKVDCDGEGVRLY---LNMLKEGVTPDSH 135
Query: 101 SLVNVLPAFA-SMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER 159
+ +L G+ GK++H V+ GL +++V N+LV MY+ CG+M A VF+R
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 160 MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA 219
K+DV SWN M++GY+ + +E ++ L +M + V+ V++ ++
Sbjct: 196 RCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLC 255
Query: 220 LNVFRQMQSCHSKPN---EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL 276
V + C ++P+ E LV+ + C + + + ++
Sbjct: 256 KRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR-------------IFRSMKARDV 302
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
+ +I+ Y + ++ +AR FD + +DR ++WT MI GY + G N+SLE+F +M
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDR--ISWTIMIDGYLRAGCFNESLEIFREM- 359
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
Q + P+ FT+ L ACA L +L G I Y+ +N+ +DV+ V N LID Y K G
Sbjct: 360 -QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV-VGNALIDMYFKCG 417
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
+ A+ VF +M ++ +WT+++ G +GQG+EA+KVF +M+ + PD IT+L +L
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
AC+HSGMVD+ K+F+ M ++ + P HY CMVD+LGRAG + +A +++ MPM P
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNS 537
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
+VW ALL R H + + E AA K+LELE +N Y LL NIYA +RWKD+ +R +
Sbjct: 538 IVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKI 597
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFAL 636
IKK PG S ++ F GD++H QSE +Y L EL Q Y+P+TS L
Sbjct: 598 VDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657
Query: 637 HDVDD 641
+ D
Sbjct: 658 FEAGD 662
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 221/412 (53%), Gaps = 21/412 (5%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V + L SN++V NA+V MY CG +D AR +FD K ++F SWN M++ Y +
Sbjct: 159 CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF---SWNLMISGYNRMK 215
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ + ++ L +M + + +V+L+ VL A + + K+VH + +
Sbjct: 216 EYEESIELLVEMERNL---VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
+ N+LV+ YA CG M A ++F M+ +DV+SW ++V GY G + A T F+QM
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR- 331
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
D +SW+ +I GY + G E+L +FR+MQS P+E T+VS+L+ CA +G+L G+
Sbjct: 332 ---DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
Y K + +++++V NA+IDMY KC A+ +F + +D+ TWTAM
Sbjct: 389 WIKTYIDKNKI------KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK--FTWTAM 440
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ G A +G+ +++++F QM QD S++P+ T L AC + R+ A + +
Sbjct: 441 VVGLANNGQGQEAIKVFFQM--QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMH 426
L C++D ++G + A + M + N++ W +L+ +H
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 199/443 (44%), Gaps = 86/443 (19%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAK--CGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
KQ+H ++ G+ + L + G + A K+F ++ + DVV WN M+ G+S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
+ + L+ M +E + D ++ ++ G + G
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG---------------------- 148
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
GAL GK+ HC+ +K L + L V NA++ MY+ C + +AR
Sbjct: 149 ------------GALACGKKLHCHVVKFGLGSN------LYVQNALVKMYSLCGLMDMAR 190
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+FD +D V +W MI GY + E +S+EL +M + V P + T+ L AC
Sbjct: 191 GVFDRRCKED--VFSWNLMISGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSAC 246
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+++ + +H YV + + L + N L++ Y+ G++D+A +F +MK ++ +SW
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPS-LRLENALVNAYAACGEMDIAVRIFRSMKARDVISW 305
Query: 417 TSLITGYGMHGQGE-------------------------------EAVKVFEEMRKEGLL 445
TS++ GY G + E++++F EM+ G++
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 446 PDGITFLVMLYACSHSGMVDEG--IKYFSCMSK-EYGVIPGEEHYACMVDLLGRAGRLDK 502
PD T + +L AC+H G ++ G IK + +K + V+ G ++D+ + G +K
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN----ALIDMYFKCGCSEK 421
Query: 503 AMKLIEGMPMKPGQVVWVALLSG 525
A K+ M + + W A++ G
Sbjct: 422 AQKVFHDMDQR-DKFTWTAMVVG 443
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 330/609 (54%), Gaps = 56/609 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCG-ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L+ N+FV NA+++MY +CG +D+ ++F+ + + + VS+ +++ + A+
Sbjct: 135 LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP---NEVSYTAVIGGLARENKVLEAV 191
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFA------SMGSWW---FGKQVHGFAVRSGLFE 132
+F+ M E +Q+D+V L N+L A S+ + GKQ+H A+R G
Sbjct: 192 QMFRLMCEK---GVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGG 248
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMR 192
D+ + NSL+++YAK M+ A +F M + +VVSWN M+ G+ + ++ +MR
Sbjct: 249 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 308
Query: 193 EENIELD-------------------------------VVSWSTVIAGYAQKGLGYEALN 221
+ + + V +W+ +++GY+ EA++
Sbjct: 309 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 368
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
FRQMQ + KP++ TL +LS CA + L GK+ H I+ ++ + +++
Sbjct: 369 NFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS------HIVSG 422
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
+I +Y++C+ + ++ IFD + ++ W +MI G+ + +L LF +M Q
Sbjct: 423 LIAVYSECEKMEISECIFDDCI-NELDIACWNSMISGFRHNMLDTKALILFRRM-HQTAV 480
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+ PN + + L +C+RL +L GR+ H V+++ Y SD +V L D Y K G+ID A
Sbjct: 481 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS-FVETALTDMYCKCGEIDSA 539
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
R FD + KN V W +I GYG +G+G+EAV ++ +M G PDGITF+ +L ACSHS
Sbjct: 540 RQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHS 599
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVA 521
G+V+ G++ S M + +G+ P +HY C+VD LGRAGRL+ A KL E P K V+W
Sbjct: 600 GLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEI 659
Query: 522 LLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
LLS CR H +V L A KL+ L+ ++ +Y LLSN Y++ R+W D ++ LM +
Sbjct: 660 LLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRV 719
Query: 582 KKRPGCSWV 590
K PG SW
Sbjct: 720 HKTPGQSWT 728
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 207/411 (50%), Gaps = 29/411 (7%)
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLF 188
G+ D ++ N L+D+Y +CG A KVF+ M +DV SWNA +T +G A +F
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
+ M E DVVSW+ +I+ +KG +AL V+++M P+ TL S+LS C+ V
Sbjct: 62 DGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV 117
Query: 249 GALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI-SVARAIFDSVAPKDR 307
+ G H +K L+ + + V NA++ MY KC I +F+S++
Sbjct: 118 LDGVFGMRCHGVAVKTGLDKN------IFVGNALLSMYAKCGFIVDYGVRVFESLSQP-- 169
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQ----DRSVKPNAFTISCSLMACARLAALR 363
N V++TA+IGG A+ + +++++F M ++ D N +IS C L+ +
Sbjct: 170 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 229
Query: 364 S---GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
G++IH LR + D L++ N L++ Y+K+ D++ A ++F M N VSW +I
Sbjct: 230 GNELGKQIHCLALRLGFGGD-LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 288
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
G+G + +++V+ MR G P+ +T + +L AC SG V+ G + FS + +
Sbjct: 289 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ---- 344
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGCRK 528
P + M+ ++A+ M +KP + +LS C +
Sbjct: 345 -PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 394
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 110/477 (23%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF----------------------- 59
+ S+ ++CN ++ +Y CG D+AR++FDEM +++
Sbjct: 3 MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFD 62
Query: 60 -----DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS 114
D+VSWN+M++ V+ G + AL ++++M V +L +VL A + +
Sbjct: 63 GMPERDVVSWNNMISVLVRKGFEEKALVVYKRM---VCDGFLPSRFTLASVLSACSKVLD 119
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE-ASKVFERMQKKDVVSWNAMVT 173
FG + HG AV++GL +++FVGN+L+ MYAKCG + + +VFE + + + VS+ A++
Sbjct: 120 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIG 179
Query: 174 GYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
G + A+ +F M E+ +++D V S +++ S P
Sbjct: 180 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS---------------------ISAP 218
Query: 234 NEVTLVSLLSGCASVGALIH---GKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
E GC S+ + GK+ HC ++ D L + N+++++Y K K
Sbjct: 219 RE--------GCDSLSEIYGNELGKQIHCLALRLGFGGD------LHLNNSLLEIYAKNK 264
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
++ A IF + + NVV+W MI G+ Q ++ S+E ++M +D +PN T
Sbjct: 265 DMNGAELIFAEMP--EVNVVSWNIMIVGFGQEYRSDKSVEFLTRM--RDSGFQPNEVTCI 320
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
L AC R SGD++ R +F ++
Sbjct: 321 SVLGACFR------------------------------------SGDVETGRRIFSSIPQ 344
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
+ +W ++++GY + EEA+ F +M+ + L PD T V+L +C+ ++ G
Sbjct: 345 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 401
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 233/794 (29%), Positives = 378/794 (47%), Gaps = 113/794 (14%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+VFV +++MY +CG + AR++FD M + +F +W++M+ AY + + LF+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLF---TWSAMIGAYSRENRWREVAKLFR 170
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
M M D + D +L A+ G GK +H ++ G+ + V NS++ +YA
Sbjct: 171 LM--MKD-GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 146 KCGMM-------------------------------HEASKVFERMQKKDV----VSWNA 170
KCG + EA ++ + M+K+ + V+WN
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA----------- 219
++ GY+ +G + A+ L ++M I DV +W+ +I+G G+ Y+A
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 220 -----------------LNVFRQMQSCHSKPNEV----------TLVSLLSGCASV---- 248
L V Q HS ++ +LV + S C +
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 249 --------------GALIHGKETHCYTIKCILNYDRCD----QDELLVINAIIDMYTKCK 290
++I G Y K + R + ++ N +I Y K
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 291 SISVARAIFDSVAPK---DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAF 347
A +F + RN TW +I GY Q+G+ +++LELF +M Q PN+
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM--QFSRFMPNSV 525
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDN 407
TI L ACA L + REIH VLR D+ + V N L DTY+KSGDI+ +R +F
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDA-IHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 408 MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
M+ K+ ++W SLI GY +HG A+ +F +M+ +G+ P+ T ++ A G VDEG
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
K F ++ +Y +IP EH + MV L GRA RL++A++ I+ M ++ +W + L+GCR
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Query: 528 KHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGC 587
H ++ + AA L LE EN + +++S IYA + + +KK G
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQ 764
Query: 588 SWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDL 647
SW++ + TF GD QS+ +L L++++ L + +++E + +
Sbjct: 765 SWIEVRNLIHTFTTGD----QSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREET 820
Query: 648 LFDHSEKLALAYGILTS--APGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRF 705
HSEK A+A+G+++S A IRI KNLR+C DCH Y+S +I+L D+
Sbjct: 821 CGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCL 880
Query: 706 HHFKNGSCSCRNYW 719
HHFKNG CSC++YW
Sbjct: 881 HHFKNGDCSCKDYW 894
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 21/375 (5%)
Query: 160 MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAG-----YAQKG 214
M+K V S+ Y EN+ L + R++N+ +I + G
Sbjct: 1 MEKLFVPSFPKTFLNYQTPAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNG 60
Query: 215 LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
EA + SK T + LL C G++ G+ H + +
Sbjct: 61 SLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-------RFGLFTEP 113
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQ 334
++ V ++ MY KC I+ AR +FDS+ ++RN+ TW+AMIG Y++ + +LF
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSM--RERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 335 MLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSK 394
M+K V P+ F L CA + +G+ IH+ V++ S L V+N ++ Y+K
Sbjct: 172 MMKD--GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGM-SSCLRVSNSILAVYAK 228
Query: 395 SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
G++D A F M+ ++ ++W S++ Y +G+ EEAV++ +EM KEG+ P +T+ ++
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK- 513
+ + G D + M + +G+ + M+ L G +A+ + M +
Sbjct: 289 IGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 514 --PGQVVWVALLSGC 526
P V ++ +S C
Sbjct: 348 VVPNAVTIMSAVSAC 362
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 195/528 (36%), Positives = 293/528 (55%), Gaps = 50/528 (9%)
Query: 63 SWNSMVAAYVQSGDT--KSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
SWN++++ Y +S L L+ +M D +D+ +LV + A +G G
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCD---GVDSFNLVFAIKACVGLGLLENGIL 130
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
+HG A+++GL +D +V SLV+MYA+ G M A KVF+ + ++ V W ++ GY
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
LF MR+ + LD +TL+
Sbjct: 191 DPEVFRLFCLMRDTGLALDA-----------------------------------LTLIC 215
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
L+ C +V A GK H +I+ DQ + L +IIDMY KC+ + AR +F+
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIR----RSFIDQSDYLQA-SIIDMYVKCRLLDNARKLFE 270
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
+ DRNVV WT +I G+A+ A ++ +LF QML++ S+ PN T++ L++C+ L
Sbjct: 271 TSV--DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE--SILPNQCTLAAILVSCSSLG 326
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
+LR G+ +H Y++RN + D + + ID Y++ G+I +AR VFD M +N +SW+S+I
Sbjct: 327 SLRHGKSVHGYMIRNGIEMDAVNFTS-FIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
+G++G EEA+ F +M+ + ++P+ +TF+ +L ACSHSG V EG K F M+++YGV
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAAN 540
+P EEHYACMVDLLGRAG + +A I+ MP+KP W ALLS CR H+ V L A
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 541 KLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
KLL +E E Y LLSNIYA+A W+ V +R M G +K G S
Sbjct: 506 KLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 206/419 (49%), Gaps = 53/419 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + +V ++V MY + G ++ A+++FDE+ + + V W ++ Y++
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEI---PVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDV-FVGNSLV 141
LF M D + LDA++L+ ++ A ++ + GK VHG ++R + ++ S++
Sbjct: 197 LF---CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMY KC ++ A K+FE ++VV W +++G++ A LF QM E+I
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI----- 308
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
PN+ TL ++L C+S+G+L HGK H Y
Sbjct: 309 ------------------------------LPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
I+ + D + + IDMY +C +I +AR +FD + +RNV++W++MI +
Sbjct: 339 IRNGIEMDAVN------FTSFIDMYARCGNIQMARTVFDMMP--ERNVISWSSMINAFGI 390
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+G ++L+ F +M Q+ V PN+ T L AC+ ++ G + + R+
Sbjct: 391 NGLFEEALDCFHKMKSQN--VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKN-AVSWTSLITGYGMHGQGEEAVKVFEEM 439
C++D ++G+I A+ DNM K A +W +L++ +H + + A ++ E++
Sbjct: 449 EEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 145/309 (46%), Gaps = 49/309 (15%)
Query: 32 AVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
+++ MY +C LD+AR++F+ + V W ++++ + + A LF+ +M+
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNV---VMWTTLISGFAKCERAVEAFDLFR---QML 304
Query: 92 DVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
I + +L +L + +S+GS GK VHG+ +R+G+ D S +DMYA+CG +
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQ 364
Query: 152 EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
A VF+ M +++V+SW++M+ + G+FE AL F +M+ +N+
Sbjct: 365 MARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV--------------- 409
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG-KETHCYTIKCILNYDR 270
PN VT VSLLS C+ G + G K+ T +Y
Sbjct: 410 --------------------VPNSVTFVSLLSACSHSGNVKEGWKQFESMT----RDYGV 445
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
++E ++D+ + I A++ D++ P W A++ H E + + E
Sbjct: 446 VPEEEHYA--CMVDLLGRAGEIGEAKSFIDNM-PVKPMASAWGALLSACRIHKEVDLAGE 502
Query: 331 LFSQMLKQD 339
+ ++L +
Sbjct: 503 IAEKLLSME 511
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 147/295 (49%), Gaps = 16/295 (5%)
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+LL+ + L H ++ H I I + +DE+++ +++ + Y + + A + F
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVI--IHGF----EDEVVLGSSLTNAYIQSNRLDFATSSF 62
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEA--NDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+ + RN +W ++ GY++ +D L L+++M + V ++F + ++ AC
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIKACV 120
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
L L +G IH ++N D D YVA L++ Y++ G ++ A+ VFD + +N+V W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDD-YVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWG 179
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH--SGMVDEGIKYFSCMS 475
L+ GY + + E ++F MR GL D +T + ++ AC + +G V + + S
Sbjct: 180 VLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI-- 237
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
+ + + A ++D+ + LD A KL E + V+W L+SG K E
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE-TSVDRNVVMWTTLISGFAKCE 291
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 317/585 (54%), Gaps = 49/585 (8%)
Query: 70 AYVQSGDTKSALG-LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS 128
+++ TK+ L ++ + I+L L ++L S GK +H +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 129 GLFE-DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTL 187
G + + N L+ MY KCG +A KVF++M +++ SWN MV+GY GM A +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 188 FEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
F+ M E DVVSW+T++ GYAQ G +EAL +++ + K NE + LL+ C
Sbjct: 136 FDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD- 306
L ++ H + +++ +IID Y KC + A+ FD + KD
Sbjct: 192 SRQLQLNRQAHGQVLVAGF------LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 307 ----------------------------RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
+N V+WTA+I GY + G N +L+LF +M+
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
VKP FT S L A A +A+LR G+EIH Y++R + + +++ LID YSKSG +
Sbjct: 306 --GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS-LIDMYSKSGSL 362
Query: 399 DVARVVFD--NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
+ + VF + KH + V W ++I+ HG G +A+++ ++M K + P+ T +V+L
Sbjct: 363 EASERVFRICDDKH-DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
ACSHSG+V+EG+++F M+ ++G++P +EHYAC++DLLGRAG + M+ IE MP +P +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
+W A+L CR H N +LG+ AA++L++L+ E+ Y LLS+IYA+ +W+ V ++R +M
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVM 541
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFVGD--RTHPQSERMYAILTEL 619
K + K SW++ +K F V D H + E +Y IL L
Sbjct: 542 KKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 218/436 (50%), Gaps = 32/436 (7%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N++ N +V+ Y + G L AR +FD M + D+VSWN+MV Y Q G+ AL ++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPER---DVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
E I+ + S +L A +Q HG + +G +V + S++D YA
Sbjct: 169 ---EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG M A + F+ M KD+ W +++GY+ +G E A LF +M E+N VSW+
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN----PVSWTA 281
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+IAGY ++G G AL++FR+M + KP + T S L AS+ +L HGKE H Y I+
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ + +VI+++IDMY+K S+ + +F + + V W MI AQHG
Sbjct: 342 V------RPNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLG 394
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-REIHAYVLRNQYDSDVLYV 384
+ +L + M+K V+PN T+ L AC+ + G R + +++ D +
Sbjct: 395 HKALRMLDDMIK--FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 385 ANCLIDTYSKSGDI-----DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
A CLID ++G + + F+ KH W +++ +HG E K +E+
Sbjct: 453 A-CLIDLLGRAGCFKELMRKIEEMPFEPDKH----IWNAILGVCRIHGNEELGKKAADEL 507
Query: 440 RKEGLLPDGITFLVML 455
K L P+ ++L
Sbjct: 508 IK--LDPESSAPYILL 521
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF------------------------- 59
SNV + +++ Y +CG ++ A++ FDEM +I
Sbjct: 212 SNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEM 271
Query: 60 ---DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWW 116
+ VSW +++A YV+ G AL LF+K M+ + ++ + + + L A AS+ S
Sbjct: 272 PEKNPVSWTALIAGYVRQGSGNRALDLFRK---MIALGVKPEQFTFSSCLCASASIASLR 328
Query: 117 FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM-QKKDVVSWNAMVTGY 175
GK++HG+ +R+ + + V +SL+DMY+K G + + +VF K D V WN M++
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+ G+ AL + + M + ++ + + ++ + GL E L F M H
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH 443
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 335/603 (55%), Gaps = 55/603 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
++FV ++ ++MY G ++ +R++FD + I WN+M+ YVQ+ ++ LF
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNI---EVWNTMIGVYVQNDCLVESIELF- 305
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ + +I D V+ + A +++ G+Q HGF ++ + + NSL+ MY+
Sbjct: 306 -LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS 364
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+CG +H++ +F MRE DVVSW+T
Sbjct: 365 RCGSVHKS-------------------------------FGVFLSMRER----DVVSWNT 389
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I+ + Q GL E L + +MQ K + +T+ +LLS +++ GK+TH + I+
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ ++ + + +IDMY+K I +++ +F+ +R+ TW +MI GY Q+G
Sbjct: 450 IQFEGMN-------SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+ +F +ML+Q+ ++PNA T++ L AC+++ ++ G+++H + +R D +V +VA
Sbjct: 503 EKTFLVFRKMLEQN--IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV-FVA 559
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
+ L+D YSK+G I A +F K +N+V++T++I GYG HG GE A+ +F M++ G+
Sbjct: 560 SALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIK 619
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
PD ITF+ +L ACS+SG++DEG+K F M + Y + P EHY C+ D+LGR GR+++A +
Sbjct: 620 PDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYE 679
Query: 506 LIEGMPMKPGQV--VWVALLSGCRKHENVKLGEFAANKLLELESEND--GSYTLLSNIYA 561
++G+ + G + +W +LL C+ H ++L E + +L + + + G LLSN+YA
Sbjct: 680 FVKGLG-EEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
++WK V ++R M+ G+KK G S ++ F D+ HP S +Y ++ L +
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAK 798
Query: 622 RIK 624
++
Sbjct: 799 DMR 801
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 259/556 (46%), Gaps = 99/556 (17%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMY------GRCGALDHARQMFDEMYKSEIFDLVSWNSMVA 69
C L+ + NS+ V N+++ MY C D R++FD M + ++V+WN++++
Sbjct: 131 CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK---NVVAWNTLIS 187
Query: 70 AYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSG 129
YV++G A F M M +++ VS VNV PA + S +G ++ G
Sbjct: 188 WYVKTGRNAEACRQFGIMMRM---EVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 130 --LFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTL 187
+D+FV +S + MYA+ G + + +VF+ ++++ WN M+ Y ++ L
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 188 FEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
F L+ + +++ +EVT + S ++
Sbjct: 305 F---------LEAIGSKEIVS-------------------------DEVTYLLAASAVSA 330
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
+ + G++ H + K N+ ++++N+++ MY++C S+ + +F S+ ++R
Sbjct: 331 LQQVELGRQFHGFVSK---NFREL---PIVIVNSLMVMYSRCGSVHKSFGVFLSM--RER 382
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+VV+W MI + Q+G ++ L L +M KQ K + T++ L A + L G++
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ--GFKIDYITVTALLSAASNLRNKEIGKQ 440
Query: 368 IHAYVLRN--QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH--KNAVSWTSLITGY 423
HA+++R Q++ Y LID YSKSG I +++ +F+ + ++ +W S+I+GY
Sbjct: 441 THAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY----- 478
+G E+ VF +M ++ + P+ +T +L ACS G VD G + ++Y
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 479 -------------GVIPGEEH------------YACMVDLLGRAGRLDKAMKLIEGMP-- 511
G I E Y M+ G+ G ++A+ L M
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 512 -MKPGQVVWVALLSGC 526
+KP + +VA+LS C
Sbjct: 617 GIKPDAITFVAVLSAC 632
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 230/500 (46%), Gaps = 44/500 (8%)
Query: 46 ARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNV 105
ARQ+FD + K V WN+++ ++ + AL + +M + DA + +
Sbjct: 58 ARQLFDAIPKPTT---VLWNTIIIGFICNNLPHEALLFYSRMKKTAPF-TNCDAYTYSST 113
Query: 106 LPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDV 165
L A A + GK VH +R V NSL++MY C A FE DV
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC---LNAPDCFEY----DV 166
Query: 166 VSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ 225
V +F+ MR +N VV+W+T+I+ Y + G EA F
Sbjct: 167 VR------------------KVFDNMRRKN----VVAWNTLISWYVKTGRNAEACRQFGI 204
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
M KP+ V+ V++ + ++ + +K Y + +L V+++ I M
Sbjct: 205 MMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVK----DLFVVSSAISM 260
Query: 286 YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
Y + I +R +FDS +RN+ W MIG Y Q+ +S+ELF + + + + +
Sbjct: 261 YAELGDIESSRRVFDSCV--ERNIEVWNTMIGVYVQNDCLVESIELFLEAIG-SKEIVSD 317
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
T + A + L + GR+ H +V +N + ++ + N L+ YS+ G + + VF
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV-IVNSLMVMYSRCGSVHKSFGVF 376
Query: 406 DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVD 465
+M+ ++ VSW ++I+ + +G +E + + EM+K+G D IT +L A S+ +
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 466 EGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP-MKPGQVVWVALLS 524
G + + + ++ G Y ++D+ ++G + + KL EG + Q W +++S
Sbjct: 437 IGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 525 GCRKHENVKLGEFAANKLLE 544
G ++ + + K+LE
Sbjct: 495 GYTQNGHTEKTFLVFRKMLE 514
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
+AR +FD++ PK V+ W +I G+ + +++L +S+M K +A+T S +L
Sbjct: 57 LARQLFDAI-PKPTTVL-WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTL 114
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY------SKSGDIDVARVVFDN 407
ACA L++G+ +H +++R +S + V N L++ Y + DV R VFDN
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 408 MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
M+ KN V+W +LI+ Y G+ EA + F M + + P ++F+ + A S S + +
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 468 IKYFSCMSK 476
++ M K
Sbjct: 234 NVFYGLMLK 242
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 306/594 (51%), Gaps = 52/594 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S+V+V ++++ MY R G +D + ++F EM + V+W +++ V +G K L
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM---PFRNAVTWTAIITGLVHAGRYKEGLT 195
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F +M ++ D + L A A + +GK +H + G + V NSL
Sbjct: 196 YFSEMSRSEELS---DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLAT 252
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY +CG M ++ L LFE M E DVVS
Sbjct: 253 MYTECGEM-------------------------------QDGLCLFENMSER----DVVS 277
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+++I Y + G +A+ F +M++ PNE T S+ S CAS+ L+ G++ HC +
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
LN D L V N+++ MY+ C ++ A +F + + R++++W+ +IGGY Q
Sbjct: 338 SLGLN------DSLSVSNSMMKMYSTCGNLVSASVLFQGM--RCRDIISWSTIIGGYCQA 389
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G + + FS M + KP F ++ L +A + GR++HA L + +
Sbjct: 390 GFGEEGFKYFSWM--RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST 447
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V + LI+ YSK G I A ++F + VS T++I GY HG+ +EA+ +FE+ K
Sbjct: 448 -VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G PD +TF+ +L AC+HSG +D G YF+ M + Y + P +EHY CMVDLL RAGRL
Sbjct: 507 GFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSD 566
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A K+I M K VVW LL C+ +++ G AA ++LEL+ + L+NIY++
Sbjct: 567 AEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSS 626
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
++ +R MK G+ K PG S ++ K + F GDR HPQSE +Y IL
Sbjct: 627 TGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 240/494 (48%), Gaps = 54/494 (10%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
G L ARQ+FD+M D+VSW S++ YV + ++ AL LF M +VD + D
Sbjct: 54 GNLRAARQVFDKMPHG---DIVSWTSIIKRYVTANNSDEALILFSAM-RVVDHAVSPDTS 109
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
L VL A + +G+ +H +AV++ L V+VG+SL+DMY + G + ++ +VF M
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQM-REENIELDVVSWSTVIAGYAQKGLGYEA 219
++ V+W A++TG H G ++ LT F +M R E +
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS---------------------- 207
Query: 220 LNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVI 279
+ T L CA + + +GK H + I R L V
Sbjct: 208 --------------DTYTFAIALKACAGLRQVKYGKAIHTHVIV------RGFVTTLCVA 247
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
N++ MYT+C + +F++++ +R+VV+WT++I Y + G+ ++E F +M ++
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMS--ERDVVSWTSLIVAYKRIGQEVKAVETFIKM--RN 303
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
V PN T + ACA L+ L G ++H VL + D L V+N ++ YS G++
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN-DSLSVSNSMMKMYSTCGNLV 362
Query: 400 VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS 459
A V+F M+ ++ +SW+++I GY G GEE K F MR+ G P L L + S
Sbjct: 363 SASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA-LASLLSVS 421
Query: 460 HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVW 519
+ V EG + ++ +G+ + ++++ + G + +A +I G + V
Sbjct: 422 GNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA-SMIFGETDRDDIVSL 480
Query: 520 VALLSGCRKHENVK 533
A+++G +H K
Sbjct: 481 TAMINGYAEHGKSK 494
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 167/359 (46%), Gaps = 19/359 (5%)
Query: 169 NAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
N+ + + G A +F++M D+VSW+++I Y EAL +F M+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHG----DIVSWTSIIKRYVTANNSDEALILFSAMRV 99
Query: 229 C-HS-KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMY 286
H+ P+ L +L C + +G+ H Y +K L + V ++++DMY
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL------LSSVYVGSSLLDMY 153
Query: 287 TKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNA 346
+ I + +F + RN VTWTA+I G G + L FS+M + + +
Sbjct: 154 KRVGKIDKSCRVFSEMPF--RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEE--LSDT 209
Query: 347 FTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFD 406
+T + +L ACA L ++ G+ IH +V+ + + L VAN L Y++ G++ +F+
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT-TLCVANSLATMYTECGEMQDGLCLFE 268
Query: 407 NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
NM ++ VSWTSLI Y GQ +AV+ F +MR + P+ TF M AC+ +
Sbjct: 269 NMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVW 328
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G + C G+ M+ + G L A L +GM + + W ++ G
Sbjct: 329 G-EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRD-IISWSTIIGG 385
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
+ + ++R V + N + + +G++ AR VFD M H + VSWTS+I Y
Sbjct: 24 KPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVT 83
Query: 426 HGQGEEAVKVFEEMR--KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
+EA+ +F MR + PD V+L AC S + G + + + ++
Sbjct: 84 ANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYG-ESLHAYAVKTSLLSS 142
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ ++D+ R G++DK+ ++ MP + V W A+++G
Sbjct: 143 VYVGSSLLDMYKRVGKIDKSCRVFSEMPFR-NAVTWTAIITG 183
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 326/608 (53%), Gaps = 58/608 (9%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V L+++ +VC ++++MY +CG + A +F + L WN+MVAAY ++
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR---LEIWNAMVAAYAEND 352
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
SAL LF M + + D+ +L NV+ + +G + +GK VH
Sbjct: 353 YGYSALDLFGFMRQK---SVLPDSFTLSNVISCCSVLGLYNYGKSVH------------- 396
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
+++F+R + +A++T YS G +A +F+ M E+
Sbjct: 397 ------------------AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK- 437
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS--KPNEVTLVSLLSGCASVGALIH 253
D+V+W ++I+G + G EAL VF M+ KP+ + S+ + CA + AL
Sbjct: 438 ---DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 254 GKETHCYTIKC--ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVT 311
G + H IK +LN + V +++ID+Y+KC +A +F S++ + N+V
Sbjct: 495 GLQVHGSMIKTGLVLN--------VFVGSSLIDLYSKCGLPEMALKVFTSMSTE--NMVA 544
Query: 312 WTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAY 371
W +MI Y+++ S++LF+ ML Q + P++ +I+ L+A + A+L G+ +H Y
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQ--GIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 372 VLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEE 431
LR SD ++ N LID Y K G A +F M+HK+ ++W +I GYG HG
Sbjct: 603 TLRLGIPSDT-HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 432 AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
A+ +F+EM+K G PD +TFL ++ AC+HSG V+EG F M ++YG+ P EHYA MV
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 492 DLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDG 551
DLLGRAG L++A I+ MP++ +W+ LLS R H NV+LG +A KLL +E E
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS 781
Query: 552 SYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSER 611
+Y L N+Y A + ++ LMK G+ K+PGCSW++ T FF G + P
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAE 841
Query: 612 MYAILTEL 619
++ +L L
Sbjct: 842 IFNVLNRL 849
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 253/514 (49%), Gaps = 61/514 (11%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSE----IFDLVSWNSMVAAYVQSGDTKSALGL 83
F+ ++V MY +CG LD+A Q+FD +S+ D+ WNSM+ Y + K +G
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF--GKQVHGFAVRSGLFEDVFVGNSLV 141
F++M + ++ DA SL V+ G++ GKQ+HGF +R+ L D F+ +L+
Sbjct: 156 FRRM---LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALI 212
Query: 142 DMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
DMY K G+ +A +VF ++ K +VV WN M+ G+ G+ E++L L+ + +++L
Sbjct: 213 DMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVS 272
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
S++ + +C N SG G++ HC
Sbjct: 273 TSFTGALG-------------------ACSQSEN--------SG--------FGRQIHCD 297
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+K L+ D V +++ MY+KC + A +F V D+ + W AM+ YA
Sbjct: 298 VVKMGLHNDP------YVCTSLLSMYSKCGMVGEAETVFSCVV--DKRLEIWNAMVAAYA 349
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
++ +L+LF M + +SV P++FT+S + C+ L G+ +HA + + S
Sbjct: 350 ENDYGYSALDLFGFM--RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
+ + L+ YSK G A +VF +M+ K+ V+W SLI+G +G+ +EA+KVF +M+
Sbjct: 408 ST-IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 441 --KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
+ L PD + AC+ + G++ M K G++ + ++DL + G
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCG 525
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
+ A+K+ M + V W +++S C N+
Sbjct: 526 LPEMALKVFTSMSTE-NMVAWNSMIS-CYSRNNL 557
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP---NEVTLVSLLSGCASVGALIHGKETH 258
S ++ I QKG +AL+++ + S P + T SLL C+++ L +GK H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDG--SSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD-----RNVVTWT 313
+ YD + ++++MY KC + A +FD + R+V W
Sbjct: 84 GSVVVLGWRYDP------FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALR--SGREIHAY 371
+MI GY + + + F +ML V+P+AF++S + + R G++IH +
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLV--FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 372 VLRNQYDSDVLYVANCLIDTYSKSG-DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
+LRN D+D ++ LID Y K G ID RV + N V W +I G+G G E
Sbjct: 196 MLRNSLDTDS-FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
++ ++ + + +F L ACS S
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/594 (32%), Positives = 321/594 (54%), Gaps = 52/594 (8%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+S++ NA++ MY R + A ++F Y + DL+SW+S++A + Q G AL
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVF---YGIPMKDLISWSSIIAGFSQLGFEFEALS- 255
Query: 84 FQKMWEMVDVDI-QLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ EM+ + + + L A +S+ +G Q+HG ++S L + G SL D
Sbjct: 256 --HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYA+CG ++ A +VF+++++ D S
Sbjct: 314 MYARCGFLNSARRVFDQIERP-----------------------------------DTAS 338
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ +IAG A G EA++VF QM+S P+ ++L SLL AL G + H Y I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K D L V N+++ MYT C + +F+ + + V+W ++ QH
Sbjct: 399 KWGFLAD------LTVCNSLLTMYTFCSDLYCCFNLFEDFR-NNADSVSWNTILTACLQH 451
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ + L LF ML + +P+ T+ L C +++L+ G ++H Y L+ +
Sbjct: 452 EQPVEMLRLFKLMLVSE--CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ- 508
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
++ N LID Y+K G + AR +FD+M +++ VSW++LI GY G GEEA+ +F+EM+
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G+ P+ +TF+ +L ACSH G+V+EG+K ++ M E+G+ P +EH +C+VDLL RAGRL++
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A + I+ M ++P VVW LLS C+ NV L + AA +L+++ N ++ LL +++A+
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHAS 688
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
+ W++ +RS MK +KK PG SW++ + FF D HP+ + +Y +L
Sbjct: 689 SGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 245/509 (48%), Gaps = 58/509 (11%)
Query: 22 VLNSN----VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT 77
+LNSN + N +++MYG+CG+L AR++FD M + +LVS+ S++ Y Q+G
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER---NLVSYTSVITGYSQNGQG 149
Query: 78 KSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
A+ L+ KM + D+ D + +++ A AS GKQ+H ++ +
Sbjct: 150 AEAIRLYLKMLQE---DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
N+L+ MY + M +AS+VF + KD++SW++++ G+S +G AL+ ++M
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEML----- 261
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+ VF PNE S L C+S+ +G +
Sbjct: 262 ---------------------SFGVFH--------PNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H IK L + ++ DMY +C ++ AR +FD + D +W +I
Sbjct: 293 HGLCIKSEL------AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD--TASWNVIIA 344
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
G A +G A++++ +FSQM + P+A ++ L A + AL G +IH+Y+++ +
Sbjct: 345 GLANNGYADEAVSVFSQM--RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVF 436
+D L V N L+ Y+ D+ +F++ ++ ++VSW +++T H Q E +++F
Sbjct: 403 LAD-LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+ M PD IT +L C + G + C S + G+ P + ++D+ +
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
G L +A ++ + M + V W L+ G
Sbjct: 521 CGSLGQARRIFDSMDNR-DVVSWSTLIVG 548
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 196/421 (46%), Gaps = 53/421 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N ++ MY RCG L+ AR++FD++ + D SWN ++A +G A+
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP---DTASWNVIIAGLANNGYADEAVS 357
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F +M + DA+SL ++L A + G Q+H + ++ G D+ V NSL+
Sbjct: 358 VFSQMRSSGFIP---DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 143 MYAKCGMMHEASKVFERMQKK-DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
MY C ++ +FE + D VSWN
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWN-------------------------------- 442
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
T++ Q E L +F+ M +P+ +T+ +LL GC + +L G + HCY+
Sbjct: 443 ---TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYS 499
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K L E + N +IDMY KC S+ AR IFDS+ +R+VV+W+ +I GYAQ
Sbjct: 500 LKTGL------APEQFIKNGLIDMYAKCGSLGQARRIFDSM--DNRDVVSWSTLIVGYAQ 551
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G ++L LF +M + ++PN T L AC+ + + G +++A + S
Sbjct: 552 SGFGEEALILFKEM--KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPT 609
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
+C++D +++G ++ A D MK + V W +L++ G A K E +
Sbjct: 610 KEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENIL 669
Query: 441 K 441
K
Sbjct: 670 K 670
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 211/467 (45%), Gaps = 50/467 (10%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N + + +S + AL F + I+L + ++++ A +S S G+++H
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLR--TYISLICACSSSRSLAQGRKIHDH 92
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
+ S D + N ++ MY KCG + +A +
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDARE----------------------------- 123
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
+F+ M E N+ VS+++VI GY+Q G G EA+ ++ +M P++ S++
Sbjct: 124 --VFDFMPERNL----VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKA 177
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
CAS + GK+ H IK L+ NA+I MY + +S A +F +
Sbjct: 178 CASSSDVGLGKQLHAQVIKLE------SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM 231
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
KD +++W+++I G++Q G ++L +ML PN + SL AC+ L
Sbjct: 232 KD--LISWSSIIAGFSQLGFEFEALSHLKEMLSFG-VFHPNEYIFGSSLKACSSLLRPDY 288
Query: 365 GREIHAYVLRNQYDSDVLYVANC-LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY 423
G +IH ++++ + +A C L D Y++ G ++ AR VFD ++ + SW +I G
Sbjct: 289 GSQIHGLCIKSELAGNA--IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
+G +EAV VF +MR G +PD I+ +L A + + +G++ S + K +G +
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLAD 405
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
++ + L L E V W +L+ C +HE
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 18 LV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT 77
++ W +++ VCN+++TMY C L +F++ + D VSWN+++ A +Q
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA--DSVSWNTILTACLQHEQP 454
Query: 78 KSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
L LF+ M + + + D +++ N+L + S G QVH +++++GL + F+
Sbjct: 455 VEMLRLFKLM---LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
N L+DMYAKCG + +A ++F+ M +DVVSW+ ++ GY+ G E AL LF++M+ IE
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+ V++ V+ + GL E L ++ MQ+ H
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 339/585 (57%), Gaps = 44/585 (7%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N VV+ + + G L AR++F+ M + D+V+ NS++ Y+ +G + AL LF+++
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEK---DVVTLNSLLHGYILNGYAEEALRLFKEL--- 181
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ DA++L VL A A + + GKQ+H + G+ D + +SLV++YAKCG +
Sbjct: 182 ---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
AS + E++++ D S +A+++GY++ G + LF+ R+ N V+ W+++I+GY
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFD--RKSN--RCVILWNSMISGY 294
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK------- 263
+ EAL +F +M++ ++ + TL ++++ C +G L GK+ HC+ K
Sbjct: 295 IANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDI 353
Query: 264 ----CILN-YDRC-------------DQDELLVINAIIDMYTKCKSISVARAIFDSVAPK 305
+L+ Y +C + + +++N++I +Y C I A+ +F+ + +
Sbjct: 354 VVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI--E 411
Query: 306 DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG 365
++++++W +M G++Q+G ++LE F QM K D + + ++S + ACA +++L G
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD--LPTDEVSLSSVISACASISSLELG 469
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
++ A DSD + V++ LID Y K G ++ R VFD M + V W S+I+GY
Sbjct: 470 EQVFARATIVGLDSDQV-VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEE 485
+GQG EA+ +F++M G+ P ITF+V+L AC++ G+V+EG K F M ++G +P +E
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKE 588
Query: 486 HYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLEL 545
H++CMVDLL RAG +++A+ L+E MP +W ++L GC + +G+ AA K++EL
Sbjct: 589 HFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648
Query: 546 ESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
E EN +Y LS I+A + W+ +R LM+ + K PG SW
Sbjct: 649 EPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 230/507 (45%), Gaps = 95/507 (18%)
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFED-VFVGNSLVDMYAKCGMMHEASKVFERMQ 161
V +L + +S +Q +G ++ G V V N L+ MY++ G M A +F+ M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN-------------------------- 195
++ SWN M+ GY + G +L F+ M E +
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNA 149
Query: 196 -IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
E DVV+ ++++ GY G EAL +F+++ + + +TL ++L CA + AL G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCG 206
Query: 255 KETHCYT----IKC-------ILN-YDRCDQDELL-------------VINAIIDMYTKC 289
K+ H ++C ++N Y +C + ++A+I Y C
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 290 KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTI 349
++ +R +FD +R V+ W +MI GY + ++L LF++M + R ++ T+
Sbjct: 267 GRVNESRGLFDR--KSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR---EDSRTL 321
Query: 350 SCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD------------ 397
+ + AC L L +G+++H + + D++ VA+ L+D YSK G
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIV-VASTLLDMYSKCGSPMEACKLFSEVE 380
Query: 398 -------------------IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
ID A+ VF+ +++K+ +SW S+ G+ +G E ++ F +
Sbjct: 381 SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M K L D ++ ++ AC+ ++ G + F+ + G+ + + ++DL + G
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFA-RATIVGLDSDQVVSSSLIDLYCKCG 499
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSG 525
++ ++ + M +K +V W +++SG
Sbjct: 500 FVEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
R+ + +L+ + S ++ VAN L+ YS+SG + +AR +FD M +N SW ++I GY
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEE 485
G+ +++ F+ M + DG ++ V++ + +G + + F+ M ++ V
Sbjct: 106 SGEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSL 161
Query: 486 HYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLL-- 543
+ +++ G ++A++L + + + +L C + E +K G+ ++L
Sbjct: 162 LHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIG 216
Query: 544 --ELESENDGSYTLLSNIYA 561
E +S+ + S L N+YA
Sbjct: 217 GVECDSKMNSS---LVNVYA 233
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S+ V ++++ +Y +CG ++H R++FD M KS D V WNSM++ Y +G A+
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS---DEVPWNSMISGYATNGQGFEAID 537
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV-HGFAVRSGLFEDVFVGNSLV 141
LF+K M I+ ++ + VL A G G+++ V G D + +V
Sbjct: 538 LFKK---MSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMV 594
Query: 142 DMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG 174
D+ A+ G + EA + E M D W++++ G
Sbjct: 595 DLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 329/668 (49%), Gaps = 92/668 (13%)
Query: 36 MYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDI 95
MY +C L ARQ+FD M + I +S+NS+++ Y Q G + A+ LF E + ++
Sbjct: 91 MYCKCRELGFARQLFDRMPERNI---ISFNSLISGYTQMGFYEQAMELF---LEAREANL 144
Query: 96 QLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASK 155
+LD + L G+ +HG V +GL + VF+ N L+DMY+KCG + +A
Sbjct: 145 KLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS 204
Query: 156 VFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI------------------- 196
+F+R ++D VSWN++++GY +G E L L +M + +
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLN 264
Query: 197 -------------------ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS------ 231
E D+V + ++ YA+ G EA+ +F M S +
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 232 ------------------------------KPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+P+ T +L C++ L +G++ H
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH--A 382
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ C N+ Q + + +A+I++Y S F S + +D + +WT+MI + Q
Sbjct: 383 LICKNNF----QSDEFIGSALIELYALMGSTEDGMQCFASTSKQD--IASWTSMIDCHVQ 436
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ + + +LF Q+ ++P +T+S + ACA AAL SG +I Y +++ D+
Sbjct: 437 NEQLESAFDLFRQLFSSH--IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDA-F 493
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
V I Y+KSG++ +A VF +++ + +++++I+ HG EA+ +FE M+
Sbjct: 494 TSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ P+ FL +L AC H G+V +G+KYF CM +Y + P E+H+ C+VDLLGR GRL
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
A LI + V W ALLS CR +++ +G+ A +L+ELE E GSY LL NIY
Sbjct: 614 DAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
++ +R LM+ G+KK P SW+ T +F V D +HP S+ +Y +L E +
Sbjct: 674 DSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML-ETMD 732
Query: 622 RIKVLGYV 629
+ + Y
Sbjct: 733 NVDFVDYT 740
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 236/525 (44%), Gaps = 120/525 (22%)
Query: 110 ASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWN 169
A GS GK HG ++S L +++ N+L++MY KC + A ++F+RM +++++S+N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 170 AMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQK---------------- 213
++++GY+ +G +E A+ LF + RE N++LD +++ + ++
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 214 GLGYEA--LNVFRQMQS--------------CHSKPNEVTLVSLLSGCASVGA------- 250
GL + +NV M S C + ++V+ SL+SG VGA
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSLISGYVRVGAAEEPLNL 236
Query: 251 -------------------------------LIHGKETHCYTIKCILNYDRCDQDELLVI 279
+ G HCYT K + +D ++V
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD------IVVR 290
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND-----SLELFSQ 334
A++DMY K S+ A +F S+ P +NVVT+ AMI G+ Q E D + +LF
Sbjct: 291 TALLDMYAKNGSLKEAIKLF-SLMPS-KNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 335 MLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSK 394
M Q R ++P+ T S L AC+ L GR+IHA + +N + SD ++ + LI+ Y+
Sbjct: 349 M--QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE-FIGSALIELYAL 405
Query: 395 SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
G + F + ++ SWTS+I + + Q E A +F ++ + P+ T +M
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 455 LYACS-----HSG------MVDEGIKYFS-------CMSKEYGVIPGEEH---------- 486
+ AC+ SG + GI F+ M + G +P
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDV 525
Query: 487 --YACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGC 526
Y+ M+ L + G ++A+ + E M +KP Q ++ +L C
Sbjct: 526 ATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 15/264 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
S+ F+ +A++ +Y G+ + Q F K D+ SW SM+ +VQ+ +SA
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ---DIASWTSMIDCHVQNEQLESAFD 445
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF++++ I+ + ++ ++ A A + G+Q+ G+A++SG+ V S +
Sbjct: 446 LFRQLF---SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSIS 502
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAK G M A++VF +Q DV +++AM++ + G AL +FE M+ I+ + +
Sbjct: 503 MYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQA 562
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNE---VTLVSLLSGCASVG-----ALIH 253
+ V+ GL + L F+ M++ + PNE LV LL + L
Sbjct: 563 FLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSS 622
Query: 254 GKETHCYTIKCILNYDRCDQDELL 277
G + H T + +L+ R +D ++
Sbjct: 623 GFQDHPVTWRALLSSCRVYKDSVI 646
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 307/564 (54%), Gaps = 53/564 (9%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V ++ MY +CG + A ++F+++ + ++V W SM+A YV++ + L LF +M
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDI---TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
E ++ + + ++ A + + GK HG V+SG+ + SL+DMY KCG
Sbjct: 235 EN---NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+ A +VF +SH+ D+V W+ +I
Sbjct: 292 DISNARRVFNE---------------HSHV--------------------DLVMWTAMIV 316
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
GY G EAL++F++M+ KPN VT+ S+LSGC + L G+ H +IK + +
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-W 375
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
D V NA++ MY KC A+ +F+ + KD +V W ++I G++Q+G +++
Sbjct: 376 DTN------VANALVHMYAKCYQNRDAKYVFEMESEKD--IVAWNSIISGFSQNGSIHEA 427
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY-DSDVLYVANC 387
L LF +M SV PN T++ ACA L +L G +HAY ++ + S ++V
Sbjct: 428 LFLFHRM--NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+D Y+K GD AR++FD ++ KN ++W+++I GYG G ++++FEEM K+ P+
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
TF +L AC H+GMV+EG KYFS M K+Y P +HY CMVD+L RAG L++A+ +I
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
E MP++P + A L GC H LGE K+L+L ++ Y L+SN+YA+ RW
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWN 665
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQ 591
+R+LMK G+ K G S ++
Sbjct: 666 QAKEVRNLMKQRGLSKIAGHSTME 689
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 231/445 (51%), Gaps = 56/445 (12%)
Query: 17 CLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD 76
CLV + + + +++ MY +CG + +AR++F+E S + DLV W +M+ Y +G
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE--HSHV-DLVMWTAMIVGYTHNGS 323
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
AL LFQK M V+I+ + V++ +VL + + G+ VHG +++ G++ D V
Sbjct: 324 VNEALSLFQK---MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNV 379
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
N+LV MYAKC +A VFE +KD+V+WN++++G+S G AL LF +M E++
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
PN VT+ SL S CAS+G+L G
Sbjct: 440 -----------------------------------TPNGVTVASLFSACASLGSLAVGSS 464
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
H Y++K L + + V A++D Y KC AR IFD++ +++N +TW+AMI
Sbjct: 465 LHAYSVK--LGF--LASSSVHVGTALLDFYAKCGDPQSARLIFDTI--EEKNTITWSAMI 518
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
GGY + G+ SLELF +MLK+ + KPN T + L AC + G++ + + ++
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQ--KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKV 435
+ C++D +++G+++ A + + M + V + + + G GMH + + V
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIV 636
Query: 436 FEEMRKEGLLPDGITFLVM---LYA 457
++M L PD ++ V+ LYA
Sbjct: 637 IKKMLD--LHPDDASYYVLVSNLYA 659
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/604 (25%), Positives = 266/604 (44%), Gaps = 85/604 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++ + +V++YG G AR +FD++ + D W M+ Y + ++ +
Sbjct: 72 LMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP---DFYLWKVMLRCYCLNKESVEVVK 128
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ + + + D + L A + GK++H V+ F++V V L+D
Sbjct: 129 LYDLLMKH---GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLD 184
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG + A KVF + ++VV W +M+ GY + E L LF +MRE N+
Sbjct: 185 MYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV------ 238
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
LG NE T +L+ C + AL GK H +
Sbjct: 239 ------------LG-----------------NEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + C ++ +++DMY KC IS AR +F+ + D +V WTAMI GY +
Sbjct: 270 KSGIELSSC------LVTSLLDMYVKCGDISNARRVFNEHSHVD--LVMWTAMIVGYTHN 321
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR-NQYDSDV 381
G N++L LF +M + +KPN TI+ L C + L GR +H ++ +D++
Sbjct: 322 GSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN- 378
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
VAN L+ Y+K A+ VF+ K+ V+W S+I+G+ +G EA+ +F M
Sbjct: 379 --VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS 436
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY--ACMVDLLGRAGR 499
E + P+G+T + AC+ G + G S + G + + ++D + G
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVG-SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKH-ENVKLGEFAANKLLELESENDGSYTLLSN 558
A +LI + + W A++ G K + + E L + + N+ ++
Sbjct: 496 PQSA-RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF----- 549
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTE 618
T I S HTG+ +GKK ++ + D S + Y + +
Sbjct: 550 -----------TSILSACGHTGMVN-------EGKKYFSSMY-KDYNFTPSTKHYTCMVD 590
Query: 619 LIQR 622
++ R
Sbjct: 591 MLAR 594
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L C + +LR + H + N D+ +A L+ Y G AR+VFD + +
Sbjct: 51 LSKCTNIDSLR---QSHGVLTGNGLMGDI-SIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
W ++ Y ++ + E VK+++ + K G D I F L AC+ +D G K
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 473 CMSKEYGVIPGEEHYAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
+ K +P ++ ++D+ + G + A K+ + ++ V W ++++G K++
Sbjct: 167 QLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAGYVKND 221
Query: 531 NVKLGEFAANKLLE 544
+ G N++ E
Sbjct: 222 LCEEGLVLFNRMRE 235
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 336/658 (51%), Gaps = 107/658 (16%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
VFV +++ MYG+CG LD A ++FDE+ + V+WN+++ YVQ+G + A+ LF
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDR---NAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M + ++ V++ L A A+MG GKQ H A+ +G+ D +G SL++ Y K
Sbjct: 265 MRKQ---GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G++ A VF+R MFE DVV+W+ +
Sbjct: 322 VGLIEYAEMVFDR--------------------MFEK---------------DVVTWNLI 346
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI---- 262
I+GY Q+GL +A+ + + M+ K + VTL +L+S A L GKE CY I
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 263 ---------------KC--ILN----YDRCDQDELLVINAIIDMYTKCKSISVARAIF-- 299
KC I++ +D + +L++ N ++ Y + A +F
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 300 ---DSVAP---------------------KD-----------RNVVTWTAMIGGYAQHGE 324
+ V P KD N+++WT M+ G Q+G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ +++ +M Q+ ++PNAF+I+ +L ACA LA+L GR IH Y++RN S ++ +
Sbjct: 527 SEEAILFLRKM--QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
L+D Y+K GDI+ A VF + + ++I+ Y ++G +EA+ ++ + GL
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD IT +L AC+H+G +++ I+ F+ + + + P EHY MVDLL AG +KA+
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKAL 704
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
+LIE MP KP + +L++ C K +L ++ + KLLE E EN G+Y +SN YA
Sbjct: 705 RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQ--GKKGTATFFVGDRTHPQSERMYAILTELI 620
W +V ++R +MK G+KK+PGCSW+Q G++G F D+TH + + +L L+
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLL 822
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 263/513 (51%), Gaps = 56/513 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N ++ +V Y +C AL+ A +F ++ +F SW +++ + G + AL F
Sbjct: 106 NEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVF---SWAAIIGVKCRIGLCEGALMGF- 161
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM++ +I D + NV A ++ FG+ VHG+ V+SGL + VFV +SL DMY
Sbjct: 162 --VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG++ +ASKVF+ + ++ V+WNA++ GY G E A+ LF MR++ +E
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE-------- 271
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
P VT+ + LS A++G + GK++H I
Sbjct: 272 ---------------------------PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG 304
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ D ++ ++++ Y K I A +FD + KD VVTW +I GY Q G
Sbjct: 305 MELDN------ILGTSLLNFYCKVGLIEYAEMVFDRMFEKD--VVTWNLIISGYVQQGLV 356
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
D++ + Q+++ ++ +K + T++ + A AR L+ G+E+ Y +R+ ++SD++ +A
Sbjct: 357 EDAIYM-CQLMRLEK-LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV-LA 413
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
+ ++D Y+K G I A+ VFD+ K+ + W +L+ Y G EA+++F M+ EG+
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+ IT+ +++ + +G VDE F M + G+IP + M++ + + G ++A+
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 506 LIEGMP---MKPGQVVWVALLSGCRKHENVKLG 535
+ M ++P LS C ++ +G
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 9/261 (3%)
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
++ + G EAL++ +M + + +L GC L GK+ H +K
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILK--- 98
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
N D ++E + +I Y KC ++ +A +F + + RNV +W A+IG + G
Sbjct: 99 NGDFYARNEYIETKLVI-FYAKCDALEIAEVLFSKL--RVRNVFSWAAIIGVKCRIGLCE 155
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
+L F +ML+ + + P+ F + AC L R GR +H YV+++ + D ++VA+
Sbjct: 156 GALMGFVEMLENE--IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE-DCVFVAS 212
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
L D Y K G +D A VFD + +NAV+W +L+ GY +G+ EEA+++F +MRK+G+ P
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 447 DGITFLVMLYACSHSGMVDEG 467
+T L A ++ G V+EG
Sbjct: 273 TRVTVSTCLSASANMGGVEEG 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 77/279 (27%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S++ + + V+ MY +CG++ A+++FD + DL+ WN+++AAY +SG + AL LF
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK---DLILWNTLLAAYAESGLSGEALRLF 464
Query: 85 QKM-----------WEMV--------------DVDIQLDAVSLVNVLPAFASM------- 112
M W ++ D+ +Q+ + ++ L ++ +M
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 113 -----------------------------------GSWWFGKQVHGFAVRSGLFED-VFV 136
S G+ +HG+ +R+ V +
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
SLVDMYAKCG +++A KVF ++ NAM++ Y+ G + A+ L+ + +
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGL 644
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVF------RQMQSC 229
+ D ++ + V++ G +A+ +F R M+ C
Sbjct: 645 KPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ ++GE ++L L ++M ++ + P + L C L +G++IHA +L+N
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIY--GEILQGCVYERDLSTGKQIHARILKN 99
Query: 376 -QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVK 434
+ + Y+ L+ Y+K +++A V+F ++ +N SW ++I G E A+
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY--FSCMSKEYGVIPGEEH----YA 488
F EM + + PD + AC +K+ F Y V G E +
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACG-------ALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 489 CMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ D+ G+ G LD A K+ + +P + V W AL+ G
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALMVG 248
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 333/593 (56%), Gaps = 47/593 (7%)
Query: 39 RCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
+ G + AR++FD + + D+V+W ++ Y++ GD + A LF + VD
Sbjct: 58 KVGKIAEARKLFDGLPER---DVVTWTHVITGYIKLGDMREARELFDR------VD---- 104
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFED-----VFVGNSLVDMYAKCGMMHEA 153
S NV+ A + + KQ+ ++ LF++ V N+++D YA+ G + +A
Sbjct: 105 --SRKNVVTWTAMVSGYLRSKQL---SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 154 SKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQK 213
++F+ M ++++VSWN+MV G + A+ LFE+M DVVSW+ ++ G A+
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKN 215
Query: 214 GLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQ 273
G EA +F C + N ++ ++++G A + + + +
Sbjct: 216 GKVDEARRLF----DCMPERNIISWNAMITGYAQNNRIDEADQL----------FQVMPE 261
Query: 274 DELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFS 333
+ N +I + + + ++ A +FD + K NV++WT MI GY ++ E ++L +FS
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEK--NVISWTTMITGYVENKENEEALNVFS 319
Query: 334 QMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYS 393
+ML+ D SVKPN T L AC+ LA L G++IH + ++ + + + V + L++ YS
Sbjct: 320 KMLR-DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI-VTSALLNMYS 377
Query: 394 KSGDIDVARVVFDN--MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
KSG++ AR +FDN + ++ +SW S+I Y HG G+EA++++ +MRK G P +T+
Sbjct: 378 KSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
L +L+ACSH+G+V++G+++F + ++ + EEHY C+VDL GRAGRL I
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDD 497
Query: 512 MKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTR 571
+ + + A+LS C H V + + K+LE S++ G+Y L+SNIYA + ++
Sbjct: 498 ARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAE 557
Query: 572 IRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+R MK G+KK+PGCSWV+ K F VGD++HPQ E + +IL++L +++
Sbjct: 558 MRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 245/507 (48%), Gaps = 67/507 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V V+T Y + G + AR++FD + + ++V+W +MV+ Y++S A LFQ
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRK--NVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 86 KMWE--------MVDVDIQ---LD-AVSLVNVLPAFASMGSWWFGKQVHGFAVRS----- 128
+M E M+D Q +D A+ L + +P ++ SW V R
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE-RNIVSW--NSMVKALVQRGRIDEA 190
Query: 129 -GLFE-----DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE 182
LFE DV ++VD AK G + EA ++F+ M +++++SWNAM+TGY+ +
Sbjct: 191 MNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRID 250
Query: 183 NALTLFEQMREENI---------------------------ELDVVSWSTVIAGYAQKGL 215
A LF+ M E + E +V+SW+T+I GY +
Sbjct: 251 EADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKE 310
Query: 216 GYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
EALNVF +M + KPN T VS+LS C+ + L+ G++ H K + Q
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV------HQK 364
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQ 334
+V +A+++MY+K + AR +FD+ R++++W +MI YA HG +++E+++Q
Sbjct: 365 NEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 335 MLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSK 394
M K KP+A T L AC+ + G E ++R++ CL+D +
Sbjct: 425 MRKH--GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 482
Query: 395 SGDI-DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLV 453
+G + DV + + + + ++++ +H + A +V +++ + G D T+++
Sbjct: 483 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVL 541
Query: 454 MLYACSHSGMVDEGIKYFSCMSKEYGV 480
M + +G +E + M KE G+
Sbjct: 542 MSNIYAANGKREEAAEMRMKM-KEKGL 567
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 162/353 (45%), Gaps = 47/353 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSE----------------------IFD--- 60
N+ NA++T Y + +D A Q+F M + + +FD
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 61 ---LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
++SW +M+ YV++ + + AL +F KM + D ++ + + V++L A + +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKM--LRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER--MQKKDVVSWNAMVTGY 175
G+Q+H +S ++ V ++L++MY+K G + A K+F+ + ++D++SWN+M+ Y
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP-N 234
+H G + A+ ++ QMR+ + V++ ++ + GL + + F+ + S P
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL--LVINAIIDMYTKCKSI 292
E L+ C G L K + N+ CD L AI+ +
Sbjct: 470 EEHYTCLVDLCGRAGRL-----------KDVTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 293 SVARAIFDSVAPK-DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
S+A+ + V + T+ M YA +G+ ++ E+ +M ++ +P
Sbjct: 519 SIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQP 571
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE--------- 438
LI K G I AR +FD + ++ V+WT +ITGY G EA ++F+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 439 --------MRKEGL---------LPDG--ITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
+R + L +P+ +++ M+ + SG +D+ ++ F M +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAA 539
V + MV L + GR+D+AM L E MP + V W A++ G K N K+ E A
Sbjct: 172 V-----SWNSMVKALVQRGRIDEAMNLFERMPRR-DVVSWTAMVDGLAK--NGKVDE--A 221
Query: 540 NKLLE-LESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSW 589
+L + + N S+ + YA R + ++ +M +R SW
Sbjct: 222 RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM-----PERDFASW 267
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
V N V +A++ MY + G L AR+MFD + DL+SWNSM+A Y G K A+
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ-RDLISWNSMIAVYAHHGHGKEAI 419
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG 113
++ +M + + AV+ +N+L A + G
Sbjct: 420 EMYNQMRKH---GFKPSAVTYLNLLFACSHAG 448
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 316/587 (53%), Gaps = 53/587 (9%)
Query: 38 GRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQL 97
GR G + +AR++FDE+ + + +NSM+ Y + + L L+ +M+ IQ
Sbjct: 61 GRIGEISYARKVFDELPQRGV---SVYNSMIVVYSRGKNPDEVLRLYD---QMIAEKIQP 114
Query: 98 DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF 157
D+ + + A S G+ V AV G DVFV +S++++Y KCG M EA +F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 158 ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
+M K+D V+ W+T++ G+AQ G
Sbjct: 175 GKMAKRD-----------------------------------VICWTTMVTGFAQAGKSL 199
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
+A+ +R+MQ+ + V ++ LL +G G+ H Y + L + ++
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN------VV 253
Query: 278 VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLK 337
V +++DMY K I VA +F + K V+W ++I G+AQ+G AN + E +M
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFK--TAVSWGSLISGFAQNGLANKAFEAVVEM-- 309
Query: 338 QDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGD 397
Q +P+ T+ L+AC+++ +L++GR +H Y+L+ V A L+D YSK G
Sbjct: 310 QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV--TATALMDMYSKCGA 367
Query: 398 IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
+ +R +F+++ K+ V W ++I+ YG+HG G+E V +F +M + + PD TF +L A
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSA 427
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQV 517
SHSG+V++G +FS M +Y + P E+HY C++DLL RAGR+++A+ +I +
Sbjct: 428 LSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALP 487
Query: 518 VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
+WVALLSGC H N+ +G+ AANK+L+L ++ G TL+SN +A A +WK+V ++R LM+
Sbjct: 488 IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMR 547
Query: 578 HTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+ ++K PG S ++ TF + D +H + M +L L I+
Sbjct: 548 NGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 213/411 (51%), Gaps = 59/411 (14%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C V + ++VFVC++V+ +Y +CG +D A +F +M K D++ W +MV + Q+G
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR---DVICWTTMVTGFAQAG 196
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ A+ ++ EM + D V ++ +L A +G G+ VHG+ R+GL +V
Sbjct: 197 KSLKAVEFYR---EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV 253
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
V SLVDMYAK G + AS+VF RM K VSW ++++G++ G+ A FE + E
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA---FEAVVE-- 308
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
MQS +P+ VTLV +L C+ VG+L G+
Sbjct: 309 ------------------------------MQSLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
HCY +K + DR + A++DMY+KC ++S +R IF+ V KD +V W M
Sbjct: 339 LVHCYILKRHV-LDR------VTATALMDMYSKCGALSSSREIFEHVGRKD--LVCWNTM 389
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I Y HG + + LF +M + +++P+ T + L A + + G+ + V+ N
Sbjct: 390 ISCYGIHGNGQEVVSLFLKM--TESNIEPDHATFASLLSALSHSGLVEQGQHWFS-VMIN 446
Query: 376 QYD---SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITG 422
+Y S+ YV CLID +++G ++ A + ++ K NA+ W +L++G
Sbjct: 447 KYKIQPSEKHYV--CLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMH 426
+IHA+V+ + ++ LI + + G+I AR VFD + + + S+I Y
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
+E ++++++M E + PD TF + + AC SG+V E + C + ++G +
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGY--KNDV 151
Query: 487 YAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ C +++L + G++D+A +++ G K + W +++G
Sbjct: 152 FVCSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTG 191
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 315/553 (56%), Gaps = 17/553 (3%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+VT Y LD A+ + + SEI + WN ++ +Y+++ + ++ ++++M +
Sbjct: 124 LVTFYSAFNLLDEAQTITE---NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM---MS 177
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
I+ D + +V+ A A++ + +G+ VHG S +++V N+L+ MY + G +
Sbjct: 178 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A ++F+RM ++D VSWNA++ Y+ A L ++M +E +V+W+T+ G +
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK-CILNYDRC 271
G ALN M++C+ + V +++ L C+ +GAL GK HC I+ C ++D
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
+ V N++I MY++C + A +F V + ++ TW ++I G+A + + ++ L
Sbjct: 358 N-----VRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSEETSFL 410
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
+ML PN T++ L AR+ L+ G+E H Y+LR Q D L + N L+D
Sbjct: 411 LKEMLLS--GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
Y+KSG+I A+ VFD+M+ ++ V++TSLI GYG G+GE A+ F++M + G+ PD +T
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
+ +L ACSHS +V EG F+ M +G+ EHY+CMVDL RAG LDKA + +P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 512 MKPGQVVWVALLSGCRKHENVKLGEFAANK-LLELESENDGSYTLLSNIYANARRWKDVT 570
+P + LL C H N +GE+AA+K LLE + E+ G Y LL+++YA W +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 571 RIRSLMKHTGIKK 583
+++L+ G++K
Sbjct: 649 TVKTLLSDLGVQK 661
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 227/464 (48%), Gaps = 98/464 (21%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFD-------------------------------EMY 54
N++VCNA+++MY R G +D AR++FD MY
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 55 KSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG 113
S + +V+WN++ +++G+ +G + M + ++++ +V+++N L A + +G
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNY---IGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 114 SWWFGKQVHGFAVRSGLFEDVF--VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAM 171
+ +GK H +RS F V NSL+ MY++C + A VF++++ + +WN++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 172 VTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
++G+++ E L ++M +++G+
Sbjct: 395 ISGFAYNERSEETSFLLKEM--------------LLSGF--------------------- 419
Query: 232 KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKS 291
PN +TL S+L A VG L HGKE HCY ++ + +D L++ N+++DMY K
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILR-----RQSYKDCLILWNSLVDMYAKSGE 474
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS-VKPNAFTIS 350
I A+ +FDS+ +D+ VT+T++I GY + G+ +L F M DRS +KP+ T+
Sbjct: 475 IIAAKRVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALAWFKDM---DRSGIKPDHVTMV 529
Query: 351 CSLMACARLAALRSGREI-----HAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
L AC+ +R G + H + +R + + +C++D Y ++G +D AR +F
Sbjct: 530 AVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH-----YSCMVDLYCRAGYLDKARDIF 584
Query: 406 DNMKHKNAVSW-TSLITGYGMHGQ---GEEAV-KVFEEMRKEGL 444
+ ++ + + +L+ +HG GE A K+ E + E L
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 214 GLGYEALNVFRQMQSCHSKPNEVTL---VSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
G YEA F ++ S +E L SLLS C + G++ H + I L +D
Sbjct: 60 GQLYEAFRTFSLLRY-QSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+L+ + ++ + ++I+ I + + W +IG Y ++ +S+
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEIL--------HPLPWNVLIGSYIRNKRFQESVS 170
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
++ +M+ + ++ + FT + ACA L GR +H + + + + LYV N LI
Sbjct: 171 VYKRMM--SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNALIS 227
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
Y + G +DVAR +FD M ++AVSW ++I Y + EA K+ + M G+ +T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 451 FLVMLYACSHSG 462
+ + C +G
Sbjct: 288 WNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 315/553 (56%), Gaps = 17/553 (3%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+VT Y LD A+ + + SEI + WN ++ +Y+++ + ++ ++++M +
Sbjct: 124 LVTFYSAFNLLDEAQTITE---NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM---MS 177
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
I+ D + +V+ A A++ + +G+ VHG S +++V N+L+ MY + G +
Sbjct: 178 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A ++F+RM ++D VSWNA++ Y+ A L ++M +E +V+W+T+ G +
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK-CILNYDRC 271
G ALN M++C+ + V +++ L C+ +GAL GK HC I+ C ++D
Sbjct: 298 AGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID 357
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
+ V N++I MY++C + A +F V + ++ TW ++I G+A + + ++ L
Sbjct: 358 N-----VRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSEETSFL 410
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
+ML PN T++ L AR+ L+ G+E H Y+LR Q D L + N L+D
Sbjct: 411 LKEMLLS--GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
Y+KSG+I A+ VFD+M+ ++ V++TSLI GYG G+GE A+ F++M + G+ PD +T
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
+ +L ACSHS +V EG F+ M +G+ EHY+CMVDL RAG LDKA + +P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 512 MKPGQVVWVALLSGCRKHENVKLGEFAANK-LLELESENDGSYTLLSNIYANARRWKDVT 570
+P + LL C H N +GE+AA+K LLE + E+ G Y LL+++YA W +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 571 RIRSLMKHTGIKK 583
+++L+ G++K
Sbjct: 649 TVKTLLSDLGVQK 661
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 227/464 (48%), Gaps = 98/464 (21%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFD-------------------------------EMY 54
N++VCNA+++MY R G +D AR++FD MY
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 55 KSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG 113
S + +V+WN++ +++G+ +G + M + ++++ +V+++N L A + +G
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNY---IGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 114 SWWFGKQVHGFAVRSGLFEDVF--VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAM 171
+ +GK H +RS F V NSL+ MY++C + A VF++++ + +WN++
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 172 VTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
++G+++ E L ++M +++G+
Sbjct: 395 ISGFAYNERSEETSFLLKEM--------------LLSGF--------------------- 419
Query: 232 KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKS 291
PN +TL S+L A VG L HGKE HCY ++ + +D L++ N+++DMY K
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILR-----RQSYKDCLILWNSLVDMYAKSGE 474
Query: 292 ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS-VKPNAFTIS 350
I A+ +FDS+ +D+ VT+T++I GY + G+ +L F M DRS +KP+ T+
Sbjct: 475 IIAAKRVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALAWFKDM---DRSGIKPDHVTMV 529
Query: 351 CSLMACARLAALRSGREI-----HAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
L AC+ +R G + H + +R + + +C++D Y ++G +D AR +F
Sbjct: 530 AVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH-----YSCMVDLYCRAGYLDKARDIF 584
Query: 406 DNMKHKNAVSW-TSLITGYGMHGQ---GEEAV-KVFEEMRKEGL 444
+ ++ + + +L+ +HG GE A K+ E + E L
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 15/252 (5%)
Query: 214 GLGYEALNVFRQMQSCHSKPNEVTL---VSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
G YEA F ++ S +E L SLLS C + G++ H + I L +D
Sbjct: 60 GQLYEAFRTFSLLRY-QSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+L+ + ++ + ++I+ I + + W +IG Y ++ +S+
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEIL--------HPLPWNVLIGSYIRNKRFQESVS 170
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
++ +M+ + ++ + FT + ACA L GR +H + + + + LYV N LI
Sbjct: 171 VYKRMM--SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNALIS 227
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
Y + G +DVAR +FD M ++AVSW ++I Y + EA K+ + M G+ +T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 451 FLVMLYACSHSG 462
+ + C +G
Sbjct: 288 WNTIAGGCLEAG 299
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 329/594 (55%), Gaps = 60/594 (10%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+CN+++TMY +CG L + ++F+++ K + VSW +M+++Y + ++ AL F
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKK---NAVSWTAMISSYNRGEFSEKALRSFS--- 292
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL---FEDVFVGNSLVDMYA 145
EM+ I+ + V+L +VL + +G GK VHGFAVR L +E + + +LV++YA
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL--ALVELYA 350
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+CG + + V VVS + ++V+W++
Sbjct: 351 ECGKLSDCETVLR------VVS-----------------------------DRNIVAWNS 375
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I+ YA +G+ +AL +FRQM + KP+ TL S +S C + G + GK+ H + I
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI--- 432
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
R D + V N++IDMY+K S+ A +F+ + K R+VVTW +M+ G++Q+G +
Sbjct: 433 ----RTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI--KHRSVVTWNSMLCGFSQNGNS 486
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+++ LF M ++ N T + AC+ + +L G+ +H ++ + L+
Sbjct: 487 VEAISLFDYMYHS--YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD--LFTD 542
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
LID Y+K GD++ A VF M ++ VSW+S+I YGMHG+ A+ F +M + G
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+ + F+ +L AC HSG V+EG YF+ M K +GV P EH+AC +DLL R+G L +A +
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
I+ MP VW +L++GCR H+ + + + N L ++ +++ G YTLLSNIYA
Sbjct: 662 TIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGE 721
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTEL 619
W++ R+RS MK + +KK PG S ++ + F G+ Q++ +Y L L
Sbjct: 722 WEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 276/552 (50%), Gaps = 88/552 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ + + +++ MYG+ G L A ++FD M + DLV+W+++V++ +++G+ AL
Sbjct: 132 VDDDAVIETSLLCMYGQTGNLSDAEKVFDGM---PVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F+ M VD ++ DAV++++V+ A +G + VHG R D + NSL+
Sbjct: 189 MFKCM---VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG + + ++FE++ KK+ VSW AM++ Y+ E AL F +M + IE
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE----- 300
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
PN VTL S+LS C +G + GK H + +
Sbjct: 301 ------------------------------PNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 263 KCIL--NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
+ L NY+ A++++Y +C +S + V+ DRN+V W ++I YA
Sbjct: 331 RRELDPNYESLSL-------ALVELYAECGKLSDCETVLRVVS--DRNIVAWNSLISLYA 381
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
G +L LF QM+ Q +KP+AFT++ S+ AC + G++IH +V+R +
Sbjct: 382 HRGMVIQALGLFRQMVTQ--RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE 439
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
+V N LID YSKSG +D A VF+ +KH++ V+W S++ G+ +G EA+ +F+ M
Sbjct: 440 --FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEG--------IKYFSCMSKEYGVIP-----GEEHY 487
L + +TFL ++ ACS G +++G I + + +I G+ +
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNA 557
Query: 488 A----------------CMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRK 528
A M++ G GR+ A+ M KP +VV++ +LS C
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 529 HENVKLGEFAAN 540
+V+ G++ N
Sbjct: 618 SGSVEEGKYYFN 629
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 232/500 (46%), Gaps = 55/500 (11%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
++ Y G+ D +R +F+ + F + ++ V +A+ L+ ++ V
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSF---MYGVLIKCNVWCHLLDAAIDLYHRL---VS 93
Query: 93 VDIQLDAVSLVNVLPAFA-SMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
Q+ +VL A A S G +VHG ++ G+ +D + SL+ MY + G +
Sbjct: 94 ETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLS 153
Query: 152 EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
+A KVF+ M +D+V+W+ +V+ G AL +F+ M ++ +E D V
Sbjct: 154 DAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAV---------- 203
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRC 271
T++S++ GCA +G L + H + +
Sbjct: 204 -------------------------TMISVVEGCAELGCLRIARSVHGQITRKMF----- 233
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
D DE L N+++ MY+KC + + IF+ +A K N V+WTAMI Y + + +L
Sbjct: 234 DLDETLC-NSLLTMYSKCGDLLSSERIFEKIAKK--NAVSWTAMISSYNRGEFSEKALRS 290
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDT 391
FS+M+K ++PN T+ L +C + +R G+ +H + +R + D + ++ L++
Sbjct: 291 FSEMIKS--GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
Y++ G + V + +N V+W SLI+ Y G +A+ +F +M + + PD T
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 408
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
+ AC ++G+V G + + + + E ++D+ ++G +D A + +
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRTD--VSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 512 MKPGQVVWVALLSGCRKHEN 531
+ V W ++L G ++ N
Sbjct: 467 HR-SVVTWNSMLCGFSQNGN 485
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 313/586 (53%), Gaps = 58/586 (9%)
Query: 9 PWQFCSCCCLV*WVLNSNVF----VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSW 64
P C + WV S + V A+++MY + G +D + Q+F+++ + ++V
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N M+ ++ QS A+ LF +M + + SL++VL GKQVHG+
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN------LGKQVHGY 475
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
++SGL D+ VG+SL +Y+KCG + E+ K+F+ + K
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK--------------------- 514
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
D W+++I+G+ + G EA+ +F +M + P+E TL ++L+
Sbjct: 515 --------------DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
C+S +L GKE H YT++ ++ + + +A+++MY+KC S+ +AR ++D +
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGID------KGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
D V+ +++I GY+QHG D LF M+ ++ ++F IS L A A
Sbjct: 615 LDP--VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM--DSFAISSILKAAALSDESSL 670
Query: 365 GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYG 424
G ++HAY+ + ++ V + L+ YSK G ID F + + ++WT+LI Y
Sbjct: 671 GAQVHAYITKIGLCTEP-SVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 425 MHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE 484
HG+ EA++V+ M+++G PD +TF+ +L ACSH G+V+E + + M K+YG+ P
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 485 EHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLE 544
HY CMVD LGR+GRL +A I M +KP +VW LL+ C+ H V+LG+ AA K +E
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 545 LESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
LE + G+Y LSNI A W +V R LMK TG++K PG S V
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 243/508 (47%), Gaps = 63/508 (12%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
+A++ ++ + + A ++F + + ++ WN+++A +++ + + LF +M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVY---CWNTIIAGALRNQNYGAVFDLFHEMC-- 243
Query: 91 VDVDIQ-LDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
V Q D+ + +VL A AS+ FGK V ++ G EDVFV ++VD+YAKCG
Sbjct: 244 --VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGH 300
Query: 150 MHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAG 209
M EA +VF R+ VVSW M++GY+ +AL +F++MR +E+
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI----------- 349
Query: 210 YAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYD 269
N T+ S++S C + + H + K D
Sbjct: 350 ------------------------NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 270 RCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR-NVVTWTAMIGGYAQHGEANDS 328
V A+I MY+K I ++ +F+ + R N+V MI ++Q + +
Sbjct: 386 SS------VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKA 437
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
+ LF++ML++ ++ + F++ CSL++ L L G+++H Y L++ D L V + L
Sbjct: 438 IRLFTRMLQE--GLRTDEFSV-CSLLSV--LDCLNLGKQVHGYTLKSGLVLD-LTVGSSL 491
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
YSK G ++ + +F + K+ W S+I+G+ +G EA+ +F EM +G PD
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 449 ITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
T +L CS + G K + G+ G + + +V++ + G L A ++ +
Sbjct: 552 STLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 509 GMP-MKPGQVVWVALLSGCRKHENVKLG 535
+P + P V +L+SG +H ++ G
Sbjct: 611 RLPELDP--VSCSSLISGYSQHGLIQDG 636
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 249/515 (48%), Gaps = 69/515 (13%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
++L +VF+ ++++ Y G++ A ++FD + + D+VS N M++ Y Q + +
Sbjct: 78 YLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQP---DVVSCNIMISGYKQHRLFEES 134
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
L F KM + + + +S +V+ A +++ + F + V ++ G F V ++L
Sbjct: 135 LRFFSKMHFL---GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+D+++K +A KVF +V WN ++ G +R +N
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG---------------ALRNQN----- 231
Query: 201 VSWSTVIAGYAQKGLGYEAL-NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
Y A+ ++F +M KP+ T S+L+ CAS+ L GK
Sbjct: 232 ----------------YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQA 275
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
IK C +++ V AI+D+Y KC ++ A +F + + +VV+WT M+ GY
Sbjct: 276 RVIK-------CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRI--PNPSVVSWTVMLSGY 326
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
+ +A +LE+F +M + V+ N T++ + AC R + + ++HA+V ++ +
Sbjct: 327 TKSNDAFSALEIFKEM--RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 384
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVF---DNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
D VA LI YSKSGDID++ VF D+++ +N V+ +IT + + +A+++F
Sbjct: 385 DS-SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLF 441
Query: 437 EEMRKEGLLPD--GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLL 494
M +EGL D + L+ + C + G G S G++ + + L
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS------GLVLDLTVGSSLFTLY 495
Query: 495 GRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ G L+++ KL +G+P K W +++SG ++
Sbjct: 496 SKCGSLEESYKLFQGIPFK-DNACWASMISGFNEY 529
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+RL LR+ + + A++LR +++ L+ YS SG + A +FD + + VS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS--HSGMVDEGIKYFSCM 474
+I+GY H EE+++ F +M G + I++ ++ ACS + + E + C
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELV---CCH 175
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
+ + G E + ++D+ + R + A K+ + W +++G +++N
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQN 231
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 296/570 (51%), Gaps = 55/570 (9%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
++++VC A+V Y +CG L+ A ++FDEM K D+V+WN+M++ + +GLF
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKR---DMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
M + + L ++V + PA G+ GK VHG+ R G D+ V ++D+Y
Sbjct: 193 LDMRRIDGLSPNLS--TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVY 250
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
AK + A +VF+ KK+ V+W S
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTW-----------------------------------S 275
Query: 205 TVIAGYAQKGLGYEALNVFRQM--QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+I GY + + EA VF QM + V + +L GCA G L G+ HCY +
Sbjct: 276 AMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAV 335
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K D L V N II Y K S+ A F + KD V+++ ++I G +
Sbjct: 336 KAGFILD------LTVQNTIISFYAKYGSLCDAFRQFSEIGLKD--VISYNSLITGCVVN 387
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+S LF +M + ++P+ T+ L AC+ LAAL G H Y + + Y +
Sbjct: 388 CRPEESFRLFHEM--RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNT- 444
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ N L+D Y+K G +DVA+ VFD M ++ VSW +++ G+G+HG G+EA+ +F M++
Sbjct: 445 SICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQET 504
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK-EYGVIPGEEHYACMVDLLGRAGRLD 501
G+ PD +T L +L ACSHSG+VDEG + F+ MS+ ++ VIP +HY CM DLL RAG LD
Sbjct: 505 GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLD 564
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A + MP +P V LLS C ++N +LG + K+ L E S LLSN Y+
Sbjct: 565 EAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYS 623
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
A RW+D RIR + K G+ K PG SWV
Sbjct: 624 AAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 245/508 (48%), Gaps = 52/508 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S+ + N + +Y C ++ AR +FDE+ I + ++W+ M+ AY + + AL
Sbjct: 32 LSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRI-NPIAWDLMIRAYASNDFAEKALD 89
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ ++M++ ++ + VL A A + + GK +H S D++V +LVD
Sbjct: 90 LY---YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVD 146
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YAKCG + A KVF+ M K+D+V+WNAM++G+S + + LF MR +D +S
Sbjct: 147 FYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR----RIDGLS 202
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
PN T+V + GAL GK H Y
Sbjct: 203 ------------------------------PNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ + D L+V I+D+Y K K I AR +FD K N VTW+AMIGGY ++
Sbjct: 233 RMGFSND------LVVKTGILDVYAKSKCIIYARRVFDLDFKK--NEVTWSAMIGGYVEN 284
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
++ E+F QML D I LM CAR L GR +H Y ++ + D L
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD-L 343
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V N +I Y+K G + A F + K+ +S+ SLITG ++ + EE+ ++F EMR
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIK-YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G+ PD T L +L ACSH + G + C+ Y V ++D+ + G+LD
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAV--NTSICNALMDMYTKCGKLD 461
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKH 529
A ++ + M K V W +L G H
Sbjct: 462 VAKRVFDTM-HKRDIVSWNTMLFGFGIH 488
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 215/440 (48%), Gaps = 53/440 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++++ V ++ +Y + + +AR++FD +K + V+W++M+ YV++ K A
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK---NEVTWSAMIGGYVENEMIKEAGE 292
Query: 83 LFQKMWEMVDVDIQL-DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F +M +V+ ++ + V++ +L A G G+ VH +AV++G D+ V N+++
Sbjct: 293 VFFQM--LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
YAK G + +A + F + KDV+S+N+++TG E + LF +MR I
Sbjct: 351 SFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI----- 405
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+P+ TL+ +L+ C+ + AL HG H Y
Sbjct: 406 ------------------------------RPDITTLLGVLTACSHLAALGHGSSCHGY- 434
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
C+++ + + NA++DMYTKC + VA+ +FD++ +D +V+W M+ G+
Sbjct: 435 --CVVHGYAVNTS---ICNALMDMYTKCGKLDVAKRVFDTMHKRD--IVSWNTMLFGFGI 487
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS-D 380
HG ++L LF+ M Q+ V P+ T+ L AC+ + G+++ + R ++
Sbjct: 488 HGLGKEALSLFNSM--QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIP 545
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQGEEAVKVFEEM 439
+ NC+ D +++G +D A + M + + +L++ + E +V ++M
Sbjct: 546 RIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKM 605
Query: 440 RKEGLLPDGITFLVMLYACS 459
+ G + + L Y+ +
Sbjct: 606 QSLGETTESLVLLSNTYSAA 625
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 177/372 (47%), Gaps = 32/372 (8%)
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
Y+ E A +F+++ I + ++W +I YA +AL+++ +M + +P
Sbjct: 45 YASCNEVELARHVFDEIPHPRI--NPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPT 102
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQ--DELLVINAIIDMYTKCKSI 292
+ T +L CA + A+ GK H + C ++ V A++D Y KC +
Sbjct: 103 KYTYPFVLKACAGLRAIDDGKLIHSHV--------NCSDFATDMYVCTALVDFYAKCGEL 154
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+A +FD + PK R++V W AMI G++ H D + LF M + D + PN TI
Sbjct: 155 EMAIKVFDEM-PK-RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID-GLSPNLSTIVGM 211
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
A R ALR G+ +H Y R + +D L V ++D Y+KS I AR VFD KN
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSND-LVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFL------VMLYACSHSGMVDE 466
V+W+++I GY + +EA +VF +M L+ D + + ++L C+ G +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG- 525
G + C + + G I ++ + G L A + + +K + + +L++G
Sbjct: 327 G-RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD-VISYNSLITGC 384
Query: 526 ---CRKHENVKL 534
CR E+ +L
Sbjct: 385 VVNCRPEESFRL 396
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 152/297 (51%), Gaps = 11/297 (3%)
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+SLL C L+ G+ H + +K L +++N + +Y C + +AR
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTL----SSSTVLVN-LTRLYASCNEVELARH 56
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD + N + W MI YA + A +L+L+ +ML + V+P +T L ACA
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKML--NSGVRPTKYTYPFVLKACA 114
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
L A+ G+ IH++V + + +D +YV L+D Y+K G++++A VFD M ++ V+W
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATD-MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWN 173
Query: 418 SLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
++I+G+ +H + + +F +MR+ +GL P+ T + M A +G + EG K
Sbjct: 174 AMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG-KAVHGYCT 232
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVK 533
G ++D+ ++ + A ++ + + K +V W A++ G ++E +K
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIK 288
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 330/660 (50%), Gaps = 92/660 (13%)
Query: 28 FVC--NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
FVC NAV+ MY + G D+A +F+ + D+VSWN++++ + D + AL
Sbjct: 110 FVCVSNAVMGMYRKAGRFDNALCIFENLVDP---DVVSWNTILSGF---DDNQIALNFVV 163
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + DA + L + G Q+ V++GL D+ VGNS + MY+
Sbjct: 164 RMK---SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYS 220
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE-NALTLFEQMREENIELDVVSWS 204
+ G A +VF+ M KD++SWN++++G S G F A+ +F M E +ELD VS++
Sbjct: 221 RSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 205 TVIAGYAQK----------GL----GYEAL---------------------NVFRQMQSC 229
+VI + GL GYE+L +VF QM
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 230 H--------------------------SKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+ PNEVT V L++ + G + H IK
Sbjct: 341 NVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
E V N+ I +Y K +++ A+ F+ + R +++W AMI G+AQ+G
Sbjct: 401 TGF------VSEPSVGNSFITLYAKFEALEDAKKAFEDITF--REIISWNAMISGFAQNG 452
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSL--MACARLAALRSGREIHAYVLRNQYDSDV 381
++++L++F L PN +T L +A A +++ G+ HA++L+ +S
Sbjct: 453 FSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS-C 508
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
V++ L+D Y+K G+ID + VF+ M KN WTS+I+ Y HG E + +F +M K
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
E + PD +TFL +L AC+ GMVD+G + F+ M + Y + P EHY+CMVD+LGRAGRL
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
+A +L+ +P PG+ + ++L CR H NVK+G A +E++ E GSY + NIYA
Sbjct: 629 EAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYA 688
Query: 562 NARRWKDVTRIRSLMKHTGIKKRPGCSWV-----QGKKGTATFFVGDRTHPQSERMYAIL 616
W IR M+ + K G SW+ +G F GD++HP+S+ +Y ++
Sbjct: 689 EKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMV 748
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 221/494 (44%), Gaps = 65/494 (13%)
Query: 46 ARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNV 105
A ++FD S+ S N ++ ++ AL +F++ ++ +D V+L
Sbjct: 27 AHKLFDG--SSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 106 LPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDV 165
L A G G Q+HGF+ SG V V N+++ MY K G A +FE + DV
Sbjct: 85 LKA--CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 166 VSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQ 225
VSWN +++G+ + AL +M+ + D ++ST
Sbjct: 143 VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTA------------------- 180
Query: 226 MQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
LS C + G + +K L D L+V N+ I M
Sbjct: 181 ----------------LSFCVGSEGFLLGLQLQSTVVKTGLESD------LVVGNSFITM 218
Query: 286 YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN-DSLELFSQMLKQDRSVKP 344
Y++ S AR +FD ++ KD +++W +++ G +Q G +++ +F M+++ +
Sbjct: 219 YSRSGSFRGARRVFDEMSFKD--MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
+FT + C L+ R+IH ++ Y+S +L V N L+ YSK G ++ + V
Sbjct: 277 VSFT--SVITTCCHETDLKLARQIHGLCIKRGYES-LLEVGNILMSRYSKCGVLEAVKSV 333
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
F M +N VSWT++I+ ++AV +F MR +G+ P+ +TF+ ++ A + +
Sbjct: 334 FHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
EG+K K G + + L + L+ A K E + + + W A++S
Sbjct: 389 KEGLKIHGLCIKT-GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMIS 446
Query: 525 GCRK----HENVKL 534
G + HE +K+
Sbjct: 447 GFAQNGFSHEALKM 460
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
LNS V +A++ MY + G +D + ++F+EM + F W S+++AY GD ++ +
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF---VWTSIISAYSSHGDFETVMN 561
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS-LV 141
LF K M+ ++ D V+ ++VL A G G ++ + E S +V
Sbjct: 562 LFHK---MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 142 DMYAKCGMMHEASKV 156
DM + G + EA ++
Sbjct: 619 DMLGRAGRLKEAEEL 633
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 305/600 (50%), Gaps = 76/600 (12%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
LD++ ++ + IF SWN + + +S + K + L+++M + + D +
Sbjct: 103 LDYSVKILKGIENPNIF---SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTY 159
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
+ A + G + G ++ L V N+ + M+A CG M A KVF+
Sbjct: 160 PVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD---- 215
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
E+ D+VSW+ +I GY + G +A+ V
Sbjct: 216 -------------------------------ESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
++ M+S KP++VT++ L+S C+ +G L GKE + Y + L + ++NA+
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM------TIPLVNAL 298
Query: 283 IDMYTKCKSISVARAIFDSVAPK-----------------------------DRNVVTWT 313
+DM++KC I AR IFD++ + +++VV W
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
AMIGG Q D+L LF +M Q + KP+ T+ L AC++L AL G IH Y+
Sbjct: 359 AMIGGSVQAKRGQDALALFQEM--QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 374 RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAV 433
+ +V + L+D Y+K G+I A VF ++ +N++++T++I G +HG A+
Sbjct: 417 KYSLSLNVA-LGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDL 493
F EM G+ PD ITF+ +L AC H GM+ G YFS M + + P +HY+ MVDL
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 494 LGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSY 553
LGRAG L++A +L+E MPM+ VW ALL GCR H NV+LGE AA KLLEL+ + G Y
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIY 595
Query: 554 TLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMY 613
LL +Y A W+D R R +M G++K PGCS ++ F V D++ P+SE++Y
Sbjct: 596 VLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIY 655
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 256/461 (55%), Gaps = 31/461 (6%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V NA + M+ CG +++AR++FDE S + DLVSWN ++ Y + G+ + A+ +++ M
Sbjct: 193 VHNASIHMFASCGDMENARKVFDE---SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
++ D V+++ ++ + + +G GK+ + + +GL + + N+L+DM++KCG
Sbjct: 250 S---EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+HEA ++F+ ++K+ +VSW M++GY+ G+ + + LF+ M E+ DVV W+ +I
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIG 362
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
G Q G +AL +F++MQ+ ++KP+E+T++ LS C+ +GAL G H Y K L+
Sbjct: 363 GSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
+ + + +++DMY KC +IS A ++F + + RN +T+TA+IGG A HG+A+ +
Sbjct: 423 N------VALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYTAIIGGLALHGDASTA 474
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
+ F++M+ D + P+ T L AC +++GR+ + + + L + +
Sbjct: 475 ISYFNEMI--DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 389 IDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQ---GEEAVKVFEEMRKEGL 444
+D ++G ++ A + ++M +A W +L+ G MHG GE+A K E+
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD---- 588
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV--IPG 483
P V+L + E K M E GV IPG
Sbjct: 589 -PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPG 628
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF----------------------- 59
L + + NA++ M+ +CG + AR++FD + K I
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 60 -----DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS 114
D+V WN+M+ VQ+ + AL LFQ EM + + D +++++ L A + +G+
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQ---EMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
G +H + + L +V +G SLVDMYAKCG + EA VF +Q ++ +++ A++ G
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 464
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
+ G A++ F +M + I D +++ +++ G+ + F QM+S
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 518
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 290/566 (51%), Gaps = 54/566 (9%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
+ N VVT G+ + +S + S+N+++++Y + + ++
Sbjct: 39 LIINKVVTFLGKSADFASYSSVILHSIRS-VLSSFSYNTLLSSYAVCDKPRVTIFAYKTF 97
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
V D + V A GKQ+HG + G ++D++V NSLV Y C
Sbjct: 98 ---VSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC 154
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G A KVF M + DVVSW+ +I
Sbjct: 155 GESRNACKVFGEMPVR-----------------------------------DVVSWTGII 179
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
G+ + GL EAL+ F +M +PN T V +L VG L GK H +K
Sbjct: 180 TGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILK---- 232
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
R L NA+IDMY KC+ +S A +F + KD+ V+W +MI G + +
Sbjct: 233 --RASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDK--VSWNSMISGLVHCERSKE 288
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+++LFS +++ +KP+ ++ L ACA L A+ GR +H Y+L D ++
Sbjct: 289 AIDLFS-LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT-HIGTA 346
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
++D Y+K G I+ A +F+ ++ KN +W +L+ G +HG G E+++ FEEM K G P+
Sbjct: 347 IVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPN 406
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCM-SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
+TFL L AC H+G+VDEG +YF M S+EY + P EHY CM+DLL RAG LD+A++L
Sbjct: 407 LVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALEL 466
Query: 507 IEGMPMKPGQVVWVALLSGCRKHENV-KLGEFAANKLLELESENDGSYTLLSNIYANARR 565
++ MP+KP + A+LS C+ + +L + + L++E E+ G Y LLSNI+A RR
Sbjct: 467 VKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRR 526
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQ 591
W DV RIR LMK GI K PG S+++
Sbjct: 527 WDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 186/390 (47%), Gaps = 54/390 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+++V N++V YG CG +A ++F EM + D+VSW ++ + ++G K AL F
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEM---PVRDVVSWTGIITGFTRTGLYKEALDTFS 196
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
KM D++ + + V VL + +G GK +HG ++ + GN+L+DMY
Sbjct: 197 KM------DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC + +A +VF ++KKD VSWN+M++G H + A+ LF M+
Sbjct: 251 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ------------- 297
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
S KP+ L S+LS CAS+GA+ HG+ H Y +
Sbjct: 298 ---------------------TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ +D + AI+DMY KC I A IF+ + + +NV TW A++GG A HG
Sbjct: 337 IKWDT------HIGTAIVDMYAKCGYIETALEIFNGI--RSKNVFTWNALLGGLAIHGHG 388
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-SDVLYV 384
+SL F +M+K KPN T +L AC + GR + +Y+ L
Sbjct: 389 LESLRYFEEMVKL--GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH 446
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
C+ID ++G +D A + M K V
Sbjct: 447 YGCMIDLLCRAGLLDEALELVKAMPVKPDV 476
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 311/565 (55%), Gaps = 31/565 (5%)
Query: 44 DHARQMFDEMYK-----SEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
D AR +F E + E+ D WN+++ ++ D + AL L M E + +D
Sbjct: 57 DFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLEN---GVSVD 113
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFE 158
SL VL A + +G G Q+HGF ++GL+ D+F+ N L+ +Y KCG + + ++F+
Sbjct: 114 KFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFD 173
Query: 159 RMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYE 218
RM K+D VS+N+M+ GY G+ +A LF+ M E L +SW+++I+GYAQ G +
Sbjct: 174 RMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNL--ISWNSMISGYAQTSDGVD 231
Query: 219 -ALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
A +F M + + ++ S++ G G + K +D + +++
Sbjct: 232 IASKLFADM----PEKDLISWNSMIDGYVKHGRIEDAKGL----------FDVMPRRDVV 277
Query: 278 VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLK 337
+ID Y K + A+ +FD + +D VV + +M+ GY Q+ ++LE+FS M K
Sbjct: 278 TWATMIDGYAKLGFVHHAKTLFDQMPHRD--VVAYNSMMAGYVQNKYHMEALEIFSDMEK 335
Query: 338 QDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ-YDSDVLYVANCLIDTYSKSG 396
+ + P+ T+ L A A+L L ++H Y++ Q Y L VA LID YSK G
Sbjct: 336 ESH-LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVA--LIDMYSKCG 392
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
I A +VF+ +++K+ W ++I G +HG GE A + ++ + L PD ITF+ +L
Sbjct: 393 SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 452
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
ACSHSG+V EG+ F M +++ + P +HY CMVD+L R+G ++ A LIE MP++P
Sbjct: 453 ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPND 512
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
V+W L+ C H+ + GE A L+ N SY LLSN+YA+ WKDV R+R++M
Sbjct: 513 VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMM 572
Query: 577 KHTGIKKRPGCSWVQGKKGTATFFV 601
K I+K PGCSW++ FFV
Sbjct: 573 KERKIEKIPGCSWIELDGRVHEFFV 597
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 236/469 (50%), Gaps = 43/469 (9%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S++F+ N ++ +Y +CG L +RQMFD M K D VS+NSM+ YV+ G SA LF
Sbjct: 147 SDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR---DSVSYNSMIDGYVKCGLIVSARELF 203
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF-----EDVFVGNS 139
M + + N++ ++ SM S + + G + S LF +D+ NS
Sbjct: 204 DLM-----------PMEMKNLI-SWNSMIS-GYAQTSDGVDIASKLFADMPEKDLISWNS 250
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
++D Y K G + +A +F+ M ++DVV+W M+ GY+ +G +A TLF+QM D
Sbjct: 251 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----D 306
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQ-SCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
VV++++++AGY Q EAL +F M+ H P++ TLV +L A +G L + H
Sbjct: 307 VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH 366
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
Y ++ +L V A+IDMY+KC SI A +F+ + +++++ W AMIGG
Sbjct: 367 LYIVEKQFYLG----GKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGG 418
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
A HG + ++ Q+ + S+KP+ T L AC+ ++ G + R
Sbjct: 419 LAIHGLGESAFDMLLQI--ERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 476
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFE 437
L C++D S+SG I++A+ + + M N V W + +T H + E V +
Sbjct: 477 EPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAK 536
Query: 438 EM-RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV--IPG 483
+ + G P L +YA GM + ++ M KE + IPG
Sbjct: 537 HLILQAGYNPSSYVLLSNMYAS--FGMWKD-VRRVRTMMKERKIEKIPG 582
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 321/590 (54%), Gaps = 42/590 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ N V + V Y +CG L A +FDEM D+V+W ++++ +VQ+G+++ LG
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR---DVVAWTAIISGHVQNGESEGGLG 213
Query: 83 LFQKMWEM-VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
KM DVD + + +L A +++G+ G+ +HGFAV++GL FV +S+
Sbjct: 214 YLCKMHSAGSDVD-KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
Y+K G EA F + +D+ SW +++ + G E + +F +M+ + + D V
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 202 SWSTVI----------AGYAQKGL----------GYEALNVFRQMQ-SCHSKPNEVTLVS 240
S +I G A G +E L+V ++ + N+ +
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 392
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+L G GA++ GK HCY +K L+ + V+N++ID+Y K ++VA +F
Sbjct: 393 MLKG---YGAVLLGKSLHCYVVKTSLDLT------ISVVNSLIDLYGKMGDLTVAWRMF- 442
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
D NV+TW AMI Y ++ ++ LF +M+ ++ KP++ T+ LMAC
Sbjct: 443 --CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN--FKPSSITLVTLLMACVNTG 498
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
+L G+ IH Y+ +++ + L ++ LID Y+K G ++ +R +FD K+AV W +I
Sbjct: 499 SLERGQMIHRYITETEHEMN-LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMI 557
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
+GYGMHG E A+ +F++M + + P G TFL +L AC+H+G+V++G K F M +Y V
Sbjct: 558 SGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDV 616
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAAN 540
P +HY+C+VDLL R+G L++A + MP P V+W LLS C H ++G A
Sbjct: 617 KPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAE 676
Query: 541 KLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
+ + + +NDG Y +L+N+Y+ A +W++ R R +M+ +G+ KR G S V
Sbjct: 677 RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 726
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 243/568 (42%), Gaps = 112/568 (19%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ N+FV + +++ Y G + + ++F + + +IF WNS++ A+ +GD +L
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIF---LWNSIIKAHFSNGDYARSLC 111
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLV 141
F + M+ D + V+ A A + + G VHG ++ G F+ + VG S V
Sbjct: 112 FF---FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFV 168
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
Y+KCG + +A VF+ M +DVV+W A+++G+ G E L +M ++D
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD-- 226
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
KPN TL C+++GAL G+ H +
Sbjct: 227 ------------------------------KPNPRTLECGFQACSNLGALKEGRCLHGFA 256
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K L + V +++ Y+K + S A F + D ++ +WT++I A+
Sbjct: 257 VKNGLASSK------FVQSSMFSFYSKSGNPSEAYLSFRELG--DEDMFSWTSIIASLAR 308
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG---------------- 365
G+ +S ++F +M Q++ + P+ ISC + ++ + G
Sbjct: 309 SGDMEESFDMFWEM--QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMYC 366
Query: 366 -------------------------------------REIHAYVLRNQYDSDVLYVANCL 388
+ +H YV++ D + V N L
Sbjct: 367 KFELLSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTI-SVVNSL 425
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
ID Y K GD+ VA +F N ++W ++I Y Q E+A+ +F+ M E P
Sbjct: 426 IDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 484
Query: 449 ITFLVMLYACSHSGMVDEGI---KYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
IT + +L AC ++G ++ G +Y + E + A ++D+ + G L+K+ +
Sbjct: 485 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNL----SLSAALIDMYAKCGHLEKSRE 540
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVK 533
L + K V W ++SG H +V+
Sbjct: 541 LFDAGNQKDA-VCWNVMISGYGMHGDVE 567
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 154/328 (46%), Gaps = 57/328 (17%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V L+ + V N+++ +YG+ G L A +MF E ++++WN+M+A+YV
Sbjct: 408 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT----NVITWNAMIASYVHCE 463
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
++ A+ LF + MV + + +++LV +L A + GS G+ +H + + ++
Sbjct: 464 QSEKAIALFDR---MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 520
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
+ +L+DMYAKCG + ++ ++F+ +KD V WN M++GY G E+A+ LF+QM E +
Sbjct: 521 LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESD 580
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
+ KP T ++LLS C G + GK
Sbjct: 581 V-----------------------------------KPTGPTFLALLSACTHAGLVEQGK 605
Query: 256 ----ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVT 311
+ H Y +K L + C ++D+ ++ ++ A + S+ P + V
Sbjct: 606 KLFLKMHQYDVKPNLKHYSC----------LVDLLSRSGNLEEAESTVMSM-PFSPDGVI 654
Query: 312 WTAMIGGYAQHGEANDSLELFSQMLKQD 339
W ++ HGE + + + + D
Sbjct: 655 WGTLLSSCMTHGEFEMGIRMAERAVASD 682
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 322/596 (54%), Gaps = 57/596 (9%)
Query: 32 AVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
++V MY +CG + A +F + D+ +N++++ +V +G S L + EM
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGGSER----DVFGYNALISGFVVNG---SPLDAMETYREMR 153
Query: 92 DVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
I D + ++L +M K+VHG A + G D +VG+ LV
Sbjct: 154 ANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLV---------- 202
Query: 152 EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
T YS E+A +F+++ + + D V W+ ++ GY+
Sbjct: 203 ---------------------TSYSKFMSVEDAQKVFDELPDRD---DSVLWNALVNGYS 238
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRC 271
Q +AL VF +M+ + T+ S+LS G + +G+ H +K D
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD-- 296
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLEL 331
++V NA+IDMY K K + A +IF+++ +R++ TW +++ + G+ + +L L
Sbjct: 297 ----IVVSNALIDMYGKSKWLEEANSIFEAM--DERDLFTWNSVLCVHDYCGDHDGTLAL 350
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV----LRNQYDSDVLYVANC 387
F +ML ++P+ T++ L C RLA+LR GREIH Y+ L N+ S+ ++ N
Sbjct: 351 FERMLCS--GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE-FIHNS 407
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+D Y K GD+ AR+VFD+M+ K++ SW +I GYG+ GE A+ +F M + G+ PD
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
ITF+ +L ACSHSG ++EG + + M Y ++P +HYAC++D+LGRA +L++A +L
Sbjct: 468 EITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELA 527
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
P+ VVW ++LS CR H N L A +L ELE E+ G Y L+SN+Y A +++
Sbjct: 528 ISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYE 587
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRI 623
+V +R M+ +KK PGCSW+ K G TFF G++THP+ + ++ L+ +I +
Sbjct: 588 EVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 205/428 (47%), Gaps = 58/428 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S+ +V + +VT Y + +++ A+++FDE+ + D V WN++V Y Q + AL
Sbjct: 191 FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD--DSVLWNALVNGYSQIFRFEDALL 248
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F KM E + + ++ +VL AF G G+ +HG AV++G D+ V N+L+D
Sbjct: 249 VFSKMREE---GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY K + EA+ +FE M ++D+ +WN+++ + + G + L LFE+M I D+
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI-- 363
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
VTL ++L C + +L G+E H Y I
Sbjct: 364 ---------------------------------VTLTTVLPTCGRLASLRQGREIHGYMI 390
Query: 263 -KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+LN ++ + N+++DMY KC + AR +FDS+ KD +W MI GY
Sbjct: 391 VSGLLNRKSSNE---FIHNSLMDMYVKCGDLRDARMVFDSMRVKDS--ASWNIMINGYGV 445
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+L++FS M + VKP+ T L AC+ L GR ++ + + ++
Sbjct: 446 QSCGELALDMFSCMCRA--GVKPDEITFVGLLQACSHSGFLNEGRN---FLAQMETVYNI 500
Query: 382 LYVAN---CLIDTYSKSGDIDVA-RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAV---K 434
L ++ C+ID ++ ++ A + N V W S+++ +HG + A+ K
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGK 560
Query: 435 VFEEMRKE 442
E+ E
Sbjct: 561 RLHELEPE 568
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 168/351 (47%), Gaps = 48/351 (13%)
Query: 118 GKQVHGFAVRSGLFED-VFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
G+Q+HGF VR G +D G SLV+MYAKCG+M A VF ++DV +NA+++G+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
G +A+ + +MR I P++
Sbjct: 138 VNGSPLDAMETYREMRANGI-----------------------------------LPDKY 162
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
T SLL G ++ L K+ H K L +D + V + ++ Y+K S+ A+
Sbjct: 163 TFPSLLKGSDAM-ELSDVKKVHGLAFK--LGFD----SDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+FD + +D +V+ W A++ GY+Q D+L +FS+M ++ V + TI+ L A
Sbjct: 216 KVFDELPDRDDSVL-WNALVNGYSQIFRFEDALLVFSKM--REEGVGVSRHTITSVLSAF 272
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+ +GR IH ++ SD++ V+N LID Y KS ++ A +F+ M ++ +W
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIV-VSNALIDMYGKSKWLEEANSIFEAMDERDLFTW 331
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
S++ + G + + +FE M G+ PD +T +L C + +G
Sbjct: 332 NSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
N T +L CA+ SG++IH +++R + D L++ Y+K G + A +V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
F ++ + +LI+G+ ++G +A++ + EMR G+LPD TF +L +
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
D +K ++ + G + +V + ++ A K+ + +P + V+W AL++
Sbjct: 178 D--VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 525 G 525
G
Sbjct: 236 G 236
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 205/612 (33%), Positives = 323/612 (52%), Gaps = 69/612 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+SN ++CN+V+ MY +C L A +F + K D S+N MV YV+S AL
Sbjct: 326 LDSNGYICNSVLNMYAKCRLLADAESVFRDHAK---LDSASFNIMVDGYVRSRRLWDALK 382
Query: 83 LFQKM--------------------W--------EMVDVDIQLDAVSLVNVLPAFASMGS 114
LF M W EM ++ I L+ V+L V+ A + +G
Sbjct: 383 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 442
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
W + + A++ L VFV +L+ MY C + +A K+F+ M ++++V+WN M+ G
Sbjct: 443 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 502
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
YS G+ E A LF+Q+ E+ D+VSW T+I G +K EAL + +M C KP+
Sbjct: 503 YSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 558
Query: 235 EVTLVSLLSGCA-----SVGALIHG----KETHCYT---------------IKCILN-YD 269
EV +V LLS A S G +HG + CY IK L ++
Sbjct: 559 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 618
Query: 270 RCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSL 329
+D + NA+I + K + AR +FD D+++ +W AMI GYAQ +L
Sbjct: 619 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQT--HDKDIFSWNAMISGYAQSLSPQLAL 676
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV-LRNQYDSDVLYVANCL 388
LF +M+ + VKP+A T+ A + L +L G+ H Y+ +D L A +
Sbjct: 677 HLFREMISSSQ-VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA--I 733
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVS---WTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
ID Y+K G I+ A +F K+ ++ + W ++I G HG + A+ ++ +++ +
Sbjct: 734 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 793
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
P+ ITF+ +L AC H+G+V+ G YF M ++G+ P +HY CMVDLLG+AGRL++A +
Sbjct: 794 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 853
Query: 506 LIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
+I+ MP+K ++W LLS R H NV++ E AA +L ++ + G +LSN+YA+A R
Sbjct: 854 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 913
Query: 566 WKDVTRIRSLMK 577
W+DV +R M+
Sbjct: 914 WEDVALVREEMR 925
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 227/498 (45%), Gaps = 77/498 (15%)
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+LV+ L + AS G+Q+H ++SGL + ++ NS+++MYAKC ++ +A VF
Sbjct: 297 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 356
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
K D S+N MV GY +AL LF+ M E + VS++T+I GYAQ EA+
Sbjct: 357 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERS----CVSYTTLIKGYAQNNQWSEAM 412
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
+FR+M++ NEVTL +++S C+ +G + + IK L + + V
Sbjct: 413 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKL------EGRVFVST 466
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
++ MY C + AR +FD + +RN+VTW M+ GY++ G + ELF Q+ ++D
Sbjct: 467 NLLHMYCLCLCLKDARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI 524
Query: 341 -----------------------------SVKPNAFTISCSLMACARLAALRSGREIHAY 371
+KP+ + L A AR G ++H
Sbjct: 525 VSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGT 584
Query: 372 VLRNQYD------------------------------SDVLYVANCLIDTYSKSGDIDVA 401
+++ +D D + N LI + K+G ++ A
Sbjct: 585 IVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQA 644
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGITFLVMLYACSH 460
R VFD K+ SW ++I+GY + A+ +F EM + PD IT + + A S
Sbjct: 645 REVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISS 704
Query: 461 SGMVDEGIKYFSCMSKEYGVIPGEEHY-ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVV- 518
G ++EG + ++ + IP ++ A ++D+ + G ++ A+ + +
Sbjct: 705 LGSLEEGKRAHDYLN--FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTIS 762
Query: 519 -WVALLSGCRKHENVKLG 535
W A++ G H + KL
Sbjct: 763 PWNAIICGSATHGHAKLA 780
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 145/301 (48%), Gaps = 46/301 (15%)
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
S S E LVS L CAS + G++ HC +K L+ + + N++++MY
Sbjct: 288 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNG------YICNSVLNMYA 341
Query: 288 KCKSISVARAIFDSVAPKD-----------------------------RNVVTWTAMIGG 318
KC+ ++ A ++F A D R+ V++T +I G
Sbjct: 342 KCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKG 401
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
YAQ+ + ++++ELF +M ++ + N T++ + AC+ L + R + + ++ + +
Sbjct: 402 YAQNNQWSEAMELFREM--RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLE 459
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
V +V+ L+ Y + AR +FD M +N V+W ++ GY G E+A ++F++
Sbjct: 460 GRV-FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQ 518
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
+ ++ D +++ M+ C +DE + Y++ M + G+ P E MVDLL +
Sbjct: 519 ITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLSASA 570
Query: 499 R 499
R
Sbjct: 571 R 571
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 196/591 (33%), Positives = 299/591 (50%), Gaps = 73/591 (12%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D V WN+++ Y ++G A LF M + A +LVN+LP G G+
Sbjct: 5 DTVVWNALICGYSRNGYECDAWKLFIVMLQQ---GFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
VHG A +SGL D V N+L+ Y+KC + A +F M+ K VSWN M+ YS G
Sbjct: 62 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 180 MFENALTLFEQMREENIEL-----------------------------DVVSWSTVIAGY 210
+ E A+T+F+ M E+N+E+ D+ ++++ Y
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAY 181
Query: 211 AQKGLGYEALNVFRQMQ-----------SCHS--------------------KPNEVTLV 239
++ G A ++ + SC++ K + V LV
Sbjct: 182 SRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALV 241
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+L GC + G H Y IK L C + LV+N +I MY+K + +F
Sbjct: 242 GILHGCKKSSHIDIGMSLHGYAIKSGL----CTKT--LVVNGLITMYSKFDDVETVLFLF 295
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
+ + ++ +++W ++I G Q G A+ + E+F QM+ + P+A TI+ L C++L
Sbjct: 296 EQL--QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG-GLLPDAITIASLLAGCSQL 352
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
L G+E+H Y LRN ++++ +V LID Y+K G+ A VF ++K +W S+
Sbjct: 353 CCLNLGKELHGYTLRNNFENEN-FVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSM 411
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
I+GY + G A+ + EMR++GL PD ITFL +L AC+H G VDEG F M KE+G
Sbjct: 412 ISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFG 471
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAA 539
+ P +HYA MV LLGRA +A+ LI M +KP VW ALLS C H +++GE+ A
Sbjct: 472 ISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVA 531
Query: 540 NKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
K+ L+ +N G Y L+SN+YA W DV R+R++MK G G S +
Sbjct: 532 RKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 50/332 (15%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
+++ V ++V Y RCG L A +++ + I L S+V+ Y + GD A+ F
Sbjct: 169 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL---TSIVSCYAEKGDMDIAVVYF 225
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
K ++ +++DAV+LV +L G +HG+A++SGL V N L+ MY
Sbjct: 226 SKTRQLC---MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMY 282
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+K + +FE++Q+ ++SWN++++G G A +F QM
Sbjct: 283 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM------------- 329
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
M + P+ +T+ SLL+GC+ + L GKE H YT++
Sbjct: 330 ---------------------MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN 368
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
N+ ++E V A+IDMY KC + A ++F S+ K TW +MI GY+ G
Sbjct: 369 --NF----ENENFVCTALIDMYAKCGNEVQAESVFKSI--KAPCTATWNSMISGYSLSGL 420
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+ +L + +M +++ +KP+ T L AC
Sbjct: 421 QHRALSCYLEM--REKGLKPDEITFLGVLSAC 450
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 19/330 (5%)
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
E D V W+ +I GY++ G +A +F M P+ TLV+LL C G + G+
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
H K L D V NA+I Y+KC + A +F + KD++ V+W MI
Sbjct: 63 VHGVAAKSGLELDS------QVKNALISFYSKCAELGSAEVLFREM--KDKSTVSWNTMI 114
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
G Y+Q G +++ +F M +++ + P L+A S +H V++
Sbjct: 115 GAYSQSGLQEEAITVFKNMFEKNVEISPVTII--------NLLSAHVSHEPLHCLVVKCG 166
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF 436
+D+ V + L+ YS+ G + A ++ + K + V TS+++ Y G + AV F
Sbjct: 167 MVNDISVVTS-LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 225
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
+ R+ + D + + +L+ C S +D G+ K G+ ++ + +
Sbjct: 226 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS-GLCTKTLVVNGLITMYSK 284
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGC 526
++ + L E + P + W +++SGC
Sbjct: 285 FDDVETVLFLFEQLQETP-LISWNSVISGC 313
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 318 bits (815), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 321/632 (50%), Gaps = 76/632 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++VFVCN++V+ Y R G ++ A +F M DLVSWN ++A Y + + A
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK---DLVSWNVVIAGYASNCEWFKAFQ 315
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVR-SGLFEDVFVGNSLV 141
LF + DV D+V+++++LP A + GK++H + +R S L ED VGN+L+
Sbjct: 316 LFHNLVHKGDV--SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
YA+ G A F M KD ++
Sbjct: 374 SFYARFGDTSAAYWAFSLMSTKD-----------------------------------II 398
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
SW+ ++ +A ++ LN+ + + + VT++SLL C +V + KE H Y+
Sbjct: 399 SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K L +D ++E + NA++D Y KC ++ A IF ++ + R +V++ +++ GY
Sbjct: 459 VKAGLLHD---EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER-RTLVSYNSLLSGYVN 514
Query: 322 HGEANDSLELFSQMLKQD-----------------------------RSVKPNAFTISCS 352
G +D+ LF++M D R ++PN TI
Sbjct: 515 SGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L CA+LA+L R+ H Y++R + + L+D Y+K G + A VF + ++
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGGLGD--IRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
V +T+++ GY +HG+G+EA+ ++ M + + PD + ML AC H+G++ +G++ +
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
+ +G+ P E YAC VDL+ R GRLD A + MP++P +W LL C + +
Sbjct: 693 SIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRM 752
Query: 533 KLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQG 592
LG AN LL+ ES++ G++ L+SN+YA +W+ V +R+LMK +KK GCSW++
Sbjct: 753 DLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Query: 593 KKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
F GD +HP+ + ++ ++ L ++K
Sbjct: 813 DGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 255/542 (47%), Gaps = 60/542 (11%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V +V+ MY +C +D ++MF +M + D V WN ++ S + + F+ M
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQM---DSLDPVVWNIVLTGLSVSCG-RETMRFFKAM- 112
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
D + + +V+ VLP +G + GK +H + +++GL +D VGN+LV MYAK G
Sbjct: 113 HFAD-EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG 171
Query: 149 MMH-EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
+ +A F+ + KDVVSWNA++ G+S M +A F M +E E
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE---------- 221
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALI---HGKETHCYTIKC 264
PN T+ ++L CAS+ I G++ H Y ++
Sbjct: 222 -------------------------PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ- 255
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
Q + V N+++ Y + I A ++F + KD +V+W +I GYA + E
Sbjct: 256 ----RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKD--LVSWNVVIAGYASNCE 309
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ +LF ++ + V P++ TI L CA+L L SG+EIH+Y+LR+ Y + V
Sbjct: 310 WFKAFQLFHNLVHKG-DVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N LI Y++ GD A F M K+ +SW +++ + + + + + + E +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYA---CMVDLLGRAGRLD 501
D +T L +L C + + + +K S + G++ EE ++D + G ++
Sbjct: 429 TLDSVTILSLLKFCINVQGIGK-VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE 487
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYA 561
A K+ G+ + V + +LLSG + N + A E+ + + +++L+ IYA
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 562 NA 563
+
Sbjct: 545 ES 546
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 215/481 (44%), Gaps = 96/481 (19%)
Query: 23 LNSNVFVCNAVVTMYGRCGAL-DHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L + V NA+V+MY + G + A FD + D+VSWN+++A + ++ A
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK---DVVSWNAIIAGFSENNMMADA- 208
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG---SWWFGKQVHGFAV-RSGLFEDVFVG 137
F+ M+ + + ++ NVLP ASM + G+Q+H + V RS L VFV
Sbjct: 209 --FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVC 266
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
NSLV Y + G + EA+ +F RM KD+VSWN ++ GY+ + A LF + +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG-- 324
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
DV P+ VT++S+L CA + L GKE
Sbjct: 325 -DV-------------------------------SPDSVTIISILPVCAQLTDLASGKEI 352
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H Y IL + +D V NA+I Y + S A F ++ KD +++W A++
Sbjct: 353 HSY----ILRHSYLLEDT-SVGNALISFYARFGDTSAAYWAFSLMSTKD--IISWNAILD 405
Query: 318 GYAQHGEANDSLELFS----QMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
+A DS + F + ++ ++ TI L C + + +E+H Y +
Sbjct: 406 AFA------DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV 459
Query: 374 RNQ--YDSDVLYVANCLIDTYSKSGDIDVARVVFDNM-KHKNAVSWTSLITGY---GMHG 427
+ +D + + N L+D Y+K G+++ A +F + + + VS+ SL++GY G H
Sbjct: 460 KAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 428 QGE----------------------------EAVKVFEEMRKEGLLPDGITFLVMLYACS 459
+ EA+ VF E++ G+ P+ +T + +L C+
Sbjct: 520 DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Query: 460 H 460
Sbjct: 580 Q 580
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 52/365 (14%)
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
++V+ A AS+ G+ +HG + G V S+++MYAKC M + K+F +M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
LD V W+ V+ G + G E +
Sbjct: 84 -----------------------------------SLDPVVWNIVLTGLSVS-CGRETMR 107
Query: 222 VFRQMQ-SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
F+ M + KP+ VT +L C +G +GK H Y IK L D LV N
Sbjct: 108 FFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT------LVGN 161
Query: 281 AIIDMYTKCKSI-SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
A++ MY K I A FD +A D++VV+W A+I G++++ D+ F MLK+
Sbjct: 162 ALVSMYAKFGFIFPDAYTAFDGIA--DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE- 218
Query: 340 RSVKPNAFTISCSLMACARL---AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+PN TI+ L CA + A RSGR+IH+YV++ + ++V N L+ Y + G
Sbjct: 219 -PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-LLPDGITFLVML 455
I+ A +F M K+ VSW +I GY + + +A ++F + +G + PD +T + +L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 456 YACSH 460
C+
Sbjct: 338 PVCAQ 342
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 28/298 (9%)
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+ ++ CASV L G+ H K L + C + V ++++MY KC+ + +
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFK--LGHIACSE----VSKSVLNMYAKCRRMDDCQK 77
Query: 298 IF---DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
+F DS+ P V W ++ G + +++ F M D KP++ T + L
Sbjct: 78 MFRQMDSLDP-----VVWNIVLTGLSVSC-GRETMRFFKAMHFADEP-KPSSVTFAIVLP 130
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI-DVARVVFDNMKHKNA 413
C RL +G+ +H+Y+++ + D L V N L+ Y+K G I A FD + K+
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTL-VGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 414 VSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSC 473
VSW ++I G+ + +A + F M KE P+ T +L C+ +D+ I S
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS---MDKNIACRSG 246
Query: 474 MSKEYGVIPG---EEH-YAC--MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
V+ + H + C +V R GR+++A L M K V W +++G
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIAG 303
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/619 (30%), Positives = 325/619 (52%), Gaps = 53/619 (8%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
+ V N+++++Y +CG L A ++FDEM + D++S N + ++++ +T+S L ++
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEM---PMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M D +L VL + K +H A+ SG +++ VGN L+ Y K
Sbjct: 147 MLG----SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFK 202
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
CG VF+ M ++V ++ + V
Sbjct: 203 CGCSVSGRGVFDGMSHRNV-----------------------------------ITLTAV 227
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
I+G + L + L +F M+ PN VT +S L+ C+ ++ G++ H L
Sbjct: 228 ISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA------L 281
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ + EL + +A++DMY+KC SI A IF+S D V+ T ++ G AQ+G
Sbjct: 282 LWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE--VSMTVILVGLAQNGSEE 339
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++++ F +ML+ V+ +A +S L +L G+++H+ V++ ++ + +V N
Sbjct: 340 EAIQFFIRMLQA--GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT-FVNN 396
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
LI+ YSK GD+ ++ VF M +N VSW S+I + HG G A+K++EEM + P
Sbjct: 397 GLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKP 456
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
+TFL +L+ACSH G++D+G + + M + +G+ P EHY C++D+LGRAG L +A
Sbjct: 457 TDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSF 516
Query: 507 IEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRW 566
I+ +P+KP +W ALL C H + ++GE+AA +L + ++ ++ L++NIY++ +W
Sbjct: 517 IDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKW 576
Query: 567 KDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVL 626
K+ + MK G+ K G S ++ + T +F V D+ HPQ+E +Y +L+ L +
Sbjct: 577 KERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDE 636
Query: 627 GYVPETSFALHDVDDEEKG 645
GY P+ F L D+ G
Sbjct: 637 GYRPDKRFILCYTGDDRNG 655
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 182/416 (43%), Gaps = 68/416 (16%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ + V N ++T Y +CG R +FD M + L ++++ +++ + L L
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITL---TAVISGLIENELHEDGLRL 243
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F M + + ++V+ ++ L A + G+Q+H + G+ ++ + ++L+DM
Sbjct: 244 FSLMRRGL---VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM 300
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y+KCG + +A +FE + D VS ++ G + G E A+ F +M + +E+D
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVV 360
Query: 204 STVIA-GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
S V+ + LG GK+ H I
Sbjct: 361 SAVLGVSFIDNSLGL------------------------------------GKQLHSLVI 384
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K R V N +I+MY+KC ++ ++ +F + PK RN V+W +MI +A+H
Sbjct: 385 K------RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM-PK-RNYVSWNSMIAAFARH 436
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR-------EIHAYVLRN 375
G +L+L+ +M + VKP T L AC+ + + GR E+H R
Sbjct: 437 GHGLAALKLYEEMTTLE--VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRT 494
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGE 430
++ C+ID ++G + A+ D++ K + W +L+ HG E
Sbjct: 495 EH-------YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 230/535 (42%), Gaps = 80/535 (14%)
Query: 160 MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA 219
+ + +V WN++++ Y+ G +A+ LF++M DV+S + V G+ +
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR----DVISQNIVFYGFLRNRETESG 140
Query: 220 LNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVI 279
+ ++M + TL +LS C + + K H I + YD+ E+ V
Sbjct: 141 FVLLKRMLGS-GGFDHATLTIVLSVCDTPEFCLVTKMIHALAI--LSGYDK----EISVG 193
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
N +I Y KC R +FD ++ RNV+T TA+I G ++ D L LFS M +
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMS--HRNVITLTAVISGLIENELHEDGLRLFSLMRRG- 250
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
V PN+ T +L AC+ + G++IHA + + +S+ L + + L+D YSK G I+
Sbjct: 251 -LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESE-LCIESALMDMYSKCGSIE 308
Query: 400 VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD--------GITF 451
A +F++ + VS T ++ G +G EEA++ F M + G+ D G++F
Sbjct: 309 DAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSF 368
Query: 452 -------------LVMLYACSHSGMVDEGI--KYFSC-----MSKEYGVIPGEEHYA--C 489
LV+ S + V+ G+ Y C + +P + +
Sbjct: 369 IDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNS 428
Query: 490 MVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGCRKHENVKLGEFAANKLLELE 546
M+ R G A+KL E M +KP V +++LL C + G N++ E+
Sbjct: 429 MIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVH 488
Query: 547 --SENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFF---- 600
YT + ++ A K+ +S + +K P C Q G +F
Sbjct: 489 GIEPRTEHYTCIIDMLGRAGLLKEA---KSFIDSLPLK--PDCKIWQALLGACSFHGDTE 543
Query: 601 VGD-------RTHPQSERMYAILTEL-------------IQRIKVLGYVPETSFA 635
VG+ +T P S + ++ + I+R+K +G ET +
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 57/308 (18%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ S + + +A++ MY +CG+++ A +F+ + D VS ++ Q+G + A+
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTE---VDEVSMTVILVGLAQNGSEEEAIQ 343
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F +M + +++DA + VL S GKQ+H ++ + FV N L++
Sbjct: 344 FFIRMLQ---AGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG + ++ VF RM K++ VSWN+M+ ++ G AL L+E
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE------------- 447
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE-----T 257
+M + KP +VT +SLL C+ VG + G+E
Sbjct: 448 ----------------------EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
+ I+ + C IIDM + + A++ DS+ P + W A++G
Sbjct: 486 EVHGIEPRTEHYTC----------IIDMLGRAGLLKEAKSFIDSL-PLKPDCKIWQALLG 534
Query: 318 GYAQHGEA 325
+ HG+
Sbjct: 535 ACSFHGDT 542
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 322/631 (51%), Gaps = 51/631 (8%)
Query: 34 VTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDV 93
+ + G + ARQ+FD M + D V+WN+M+ +Y + G + A+ LF ++
Sbjct: 11 IASLAKSGRIASARQVFDGMPE---LDTVAWNTMLTSYSRLGLHQEAIALFT---QLRFS 64
Query: 94 DIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEA 153
D + D S +L AS+G+ FG+++ +RSG + V NSL+DMY KC A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 154 SKVFERM--QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
+KVF M ++ V+W +++ Y + FE AL +F +M + +W+ +I+G+A
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV----AFAWNIMISGHA 180
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGC-ASVGALIHGKETHCYTIK------- 263
G L++F++M KP+ T SL++ C A +++G+ H +K
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 264 ----CILNY--------DRCDQDELLVI------NAIIDMYTKCKSISVARAIFDSVAPK 305
+L++ D + E + + N+IID K A +F +AP
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH-LAP- 298
Query: 306 DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG 365
++N+VTWT MI GY ++G+ +L F +M+K V + F L AC+ LA L G
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS--GVDSDHFAYGAVLHACSGLALLGHG 356
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
+ IH ++ + YV N L++ Y+K GDI A F ++ +K+ VSW +++ +G+
Sbjct: 357 KMIHGCLIHCGFQG-YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEE 485
HG ++A+K+++ M G+ PD +TF+ +L CSHSG+V+EG F M K+Y + +
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD 475
Query: 486 HYACMVDLLGRAGRLDKAMKLIEG----MPMKPGQVVWVALLSGCRKHENVKLGEFAANK 541
H CM+D+ GR G L +A L + W LL C H + +LG +
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV 535
Query: 542 LLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFV 601
L E + S+ LLSN+Y + RWK+ +R M G+KK PGCSW++ +TF V
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVV 595
Query: 602 GDRTHPQSERMYAILTELIQRIKVLGYVPET 632
GD +HP+ E + L L ++ PET
Sbjct: 596 GDSSHPRLEELSETLNCLQHEMR----NPET 622
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 198/448 (44%), Gaps = 56/448 (12%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEM-----------------YKSEIFDLV--------- 62
V N+++ MYG+C A ++F +M +E F+
Sbjct: 107 VNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK 166
Query: 63 ----SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPA-FASMGSWWF 117
+WN M++ + G +S L LF+ EM++ + + D + +++ A A + +
Sbjct: 167 RVAFAWNIMISGHAHCGKLESCLSLFK---EMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G+ VH +++G V NS++ Y K G +A + E ++ VSWN+++
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
IG E AL +F E+NI V+W+T+I GY + G G +AL F +M +
Sbjct: 284 IGETEKALEVFHLAPEKNI----VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
++L C+ + L HGK H I C Q V NA++++Y KC I A
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGF------QGYAYVGNALVNLYAKCGDIKEADR 393
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
F +A KD +V+W M+ + HG A+ +L+L+ M+ +KP+ T L C+
Sbjct: 394 AFGDIANKD--LVSWNTMLFAFGVHGLADQALKLYDNMIAS--GIKPDNVTFIGLLTTCS 449
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR---VVFDNM--KHKN 412
+ G I ++++ + C+ID + + G + A+ + ++ N
Sbjct: 450 HSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSN 509
Query: 413 AVSWTSLITGYGMHGQ---GEEAVKVFE 437
SW +L+ H G E KV +
Sbjct: 510 NSSWETLLGACSTHWHTELGREVSKVLK 537
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/693 (29%), Positives = 349/693 (50%), Gaps = 66/693 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV + ++V Y + ++ A ++ + + ++F W S+V+ +V++ K A+G F
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF---LWTSVVSGFVRNLRAKEAVGTF- 313
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM + +Q + + +L +++ S FGKQ+H ++ G + VGN+LVDMY
Sbjct: 314 --LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 146 KCGMMH-EASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
KC EAS+VF AMV+ +VVSW+
Sbjct: 372 KCSASEVEASRVF-----------GAMVSP------------------------NVVSWT 396
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
T+I G G + + +M +PN VTL +L C+ + + E H Y ++
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR- 455
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
R E++V N+++D Y + + A + S+ K R+ +T+T+++ + + G+
Sbjct: 456 -----RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM--KRRDNITYTSLVTRFNELGK 508
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+L + + M ++ + ++ + A A L AL +G+ +H Y +++ + S V
Sbjct: 509 HEMALSVINYMYGD--GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF-SGAASV 565
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
N L+D YSK G ++ A+ VF+ + + VSW L++G +G A+ FEEMR +
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD +TFL++L ACS+ + D G++YF M K Y + P EHY +V +LGRAGRL++A
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
++E M +KP +++ LL CR N+ LGE ANK L L + Y LL+++Y +
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESG 745
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTH-PQSERMYAILTELIQRI 623
+ + + R+LM + K+ G S V+ + +F D T ++ +YA + + + I
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI 805
Query: 624 KVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCH 683
K G E HS K A+ YG + ++P P+ + KN +C DCH
Sbjct: 806 KRFG---------SPYRGNENASF---HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCH 853
Query: 684 TAISYISMIIQHEIILRDSSRFHHFKNGSCSCR 716
+S ++ ++ +I +RD ++ H FKNG CSC+
Sbjct: 854 EFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 262/542 (48%), Gaps = 59/542 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N V +++ +Y +CG A ++F + + D +SW M+++ V + + AL +
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNA---DTISWTMMISSLVGARKWREALQFYS 214
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EMV + + + V +L A + +G FGK +H + G+ +V + SLVD Y+
Sbjct: 215 ---EMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ M +A +V + E DV W++
Sbjct: 271 QFSKMEDAVRVLN-----------------------------------SSGEQDVFLWTS 295
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
V++G+ + EA+ F +M+S +PN T ++LS C++V +L GK+ H TIK
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKS--ISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
+D V NA++DMY KC + + +R V+P NVV+WT +I G HG
Sbjct: 356 F------EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP---NVVSWTTLILGLVDHG 406
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
D L +M+K R V+PN T+S L AC++L +R EIHAY+LR D +++
Sbjct: 407 FVQDCFGLLMEMVK--REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV- 463
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
V N L+D Y+ S +D A V +MK ++ +++TSL+T + G+ E A+ V M +G
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ D ++ + A ++ G ++ G K+ C S + G +VD+ + G L+ A
Sbjct: 524 IRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 504 MKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDG-SYTLLSNIYAN 562
K+ E + P V W L+SG + + A ++ E+E D ++ +L + +N
Sbjct: 583 KKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 563 AR 564
R
Sbjct: 642 GR 643
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 249/512 (48%), Gaps = 60/512 (11%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C ++ + L N+ +CN ++++Y + + +AR++FDEM +F +W M++A+ +S
Sbjct: 47 CPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVF---AWTVMISAFTKSQ 103
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ SAL LF+ EM+ + + +V+ + A + +G +VHG +++G +
Sbjct: 104 EFASALSLFE---EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
VG+SL D+Y+KCG EA ++F +Q D +SW M++ S +G +
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS--SLVGARK------------- 205
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
W EAL + +M PNE T V LL G +S L GK
Sbjct: 206 -------WR-------------EALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGK 244
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
H I R +++ +++D Y++ + A + +S +D V WT++
Sbjct: 245 TIHSNIIV------RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD--VFLWTSV 296
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ G+ ++ A +++ F +M + ++PN FT S L C+ + +L G++IH+ ++
Sbjct: 297 VSGFVRNLRAKEAVGTFLEM--RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 376 QYDSDVLYVANCLIDTYSK--SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAV 433
++ D V N L+D Y K + +++ +R VF M N VSWT+LI G HG ++
Sbjct: 355 GFE-DSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYA-CMVD 492
+ EM K + P+ +T +L ACS V ++ + + + + + GE +VD
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH--VDGEMVVGNSLVD 470
Query: 493 LLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+ ++D A +I M + + + +L++
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRD-NITYTSLVT 501
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 186/422 (44%), Gaps = 48/422 (11%)
Query: 108 AFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVS 167
+F S G +H ++ GL E++ + N+L+ +Y K + A K+F+ M + V +
Sbjct: 32 SFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFA 91
Query: 168 WNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
W M++ ++ F +AL+LFE +M
Sbjct: 92 WTVMISAFTKSQEFASALSLFE-----------------------------------EMM 116
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
+ + PNE T S++ CA + + +G H IK + +V +++ D+Y+
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF------EGNSVVGSSLSDLYS 170
Query: 288 KCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAF 347
KC A +F S+ D ++WT MI + ++L+ +S+M+K V PN F
Sbjct: 171 KCGQFKEACELFSSLQNAD--TISWTMMISSLVGARKWREALQFYSEMVKA--GVPPNEF 226
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDN 407
T L+ + L G+ IH+ ++ +V+ + L+D YS+ ++ A V ++
Sbjct: 227 TF-VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVV-LKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 408 MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
++ WTS+++G+ + + +EAV F EMR GL P+ T+ +L CS +D G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
K + + G + +VD+ + + + G + P V W L+ G
Sbjct: 345 -KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 528 KH 529
H
Sbjct: 404 DH 405
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 39/267 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ + V N++V Y +D+A + M + D +++ S+V + + G + AL
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR---DNITYTSLVTRFNELGKHEMALS 514
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ M+ I++D +SL + A A++G+ GK +H ++V+SG V NSLVD
Sbjct: 515 VINYMY---GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVD 571
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG + +A KVFE + DVVSWN +V+G + G +AL+ FE+MR + E D V+
Sbjct: 572 MYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 203 WSTVIAGYAQ---KGLGYEALNVFRQM------------------------------QSC 229
+ +++ + LG E V +++ ++
Sbjct: 632 FLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM 691
Query: 230 HSKPNEVTLVSLLSGCASVGALIHGKE 256
H KPN + +LL C G L G++
Sbjct: 692 HLKPNAMIFKTLLRACRYRGNLSLGED 718
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 46/346 (13%)
Query: 231 SKPNEV-----TLVSLLSGCASVGALIHGKETHCYTIKCIL--NYDRCDQDELLVINAII 283
S+ NE+ + + +LS C S + I G HC IK L N D C N ++
Sbjct: 15 SRTNELGNLQKSCIRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLC--------NNLL 65
Query: 284 DMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVK 343
+Y K I AR +FD ++ R V WT MI + + E +L LF +M+
Sbjct: 66 SLYLKTDGIWNARKLFDEMS--HRTVFAWTVMISAFTKSQEFASALSLFEEMMAS--GTH 121
Query: 344 PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARV 403
PN FT S + +CA L + G +H V++ ++ + + V + L D YSK G A
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV-VGSSLSDLYSKCGQFKEACE 180
Query: 404 VFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS---- 459
+F ++++ + +SWT +I+ + EA++ + EM K G+ P+ TF+ +L A S
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 460 ------HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK 513
HS ++ GI + +VD + +++ A++++ +
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLK------------TSLVDFYSQFSKMEDAVRVLNS-SGE 287
Query: 514 PGQVVWVALLSGCRKHENVK--LGEFAANKLLELESENDGSYTLLS 557
+W +++SG ++ K +G F + L L+ N +LS
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 318/670 (47%), Gaps = 100/670 (14%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
+F CN+ ++ + R G L A +F +M I VSW +M++AY ++G A +F +
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSI---VSWIAMISAYAENGKMSKAWQVFDE 106
Query: 87 M-------------------------WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV 121
M +E+ + +AVS ++ F G F +
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGR--FDEAE 164
Query: 122 HGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
+A F D N L+ Y + G +EA +VF+ M K+VVS ++MV GY +G
Sbjct: 165 FLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRI 224
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPNEVTLVS 240
+A +LF++M E N V++W+ +I GY + G + +F +M Q K N TL
Sbjct: 225 VDARSLFDRMTERN----VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+ C G + H + L +D L + N+++ MY+K + A+A+F
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFD------LFLGNSLMSMYSKLGYMGEAKAVFG 334
Query: 301 SVAPKD-----------------------------RNVVTWTAMIGGYAQHGEANDSLEL 331
+ KD +++V+WT MI G++ GE + +EL
Sbjct: 335 VMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 332 FSQMLKQD-----------------------------RSVKPNAFTISCSLMACARLAAL 362
F M ++D + V PN++T S L A A LA L
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
G +IH V++ +D L V N L+ Y K G+ + A +F + N VS+ ++I+G
Sbjct: 455 IEGLQIHGRVVKMNIVND-LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
Y +G G++A+K+F + G P+G+TFL +L AC H G VD G KYF M Y + P
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKL 542
G +HYACMVDLLGR+G LD A LI MP KP VW +LLS + H V L E AA KL
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKL 633
Query: 543 LELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVG 602
+ELE ++ Y +LS +Y+ + +D RI ++ K IKK PG SW+ K F G
Sbjct: 634 IELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAG 693
Query: 603 DRTHPQSERM 612
D + E +
Sbjct: 694 DESQLNLEEI 703
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 373 LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEA 432
L S ++ N I ++++G++ A +F M +++ VSW ++I+ Y +G+ +A
Sbjct: 41 LETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKA 100
Query: 433 VKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV---IPGEE--HY 487
+VF+EM P +T S++ M+ IK + K Y + IP + Y
Sbjct: 101 WQVFDEM------PVRVT-------TSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSY 147
Query: 488 ACMVDLLGRAGRLDKAMKLIEGMPMK-PGQVVWVALLSG 525
A M+ RAGR D+A L P+K V LLSG
Sbjct: 148 ATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSG 186
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 291/551 (52%), Gaps = 64/551 (11%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
L +AR +F+ + ++ WNSM+ Y S + AL +Q EM+ D +
Sbjct: 57 LSYARSVFESIDCPSVY---IWNSMIRGYSNSPNPDKALIFYQ---EMLRKGYSPDYFTF 110
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
VL A + + FG VHGF V++G +++V L+ MY CG ++ +VFE
Sbjct: 111 PYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFE---- 166
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
D+ WN VV+W ++I+G+ +A+
Sbjct: 167 -DIPQWN------------------------------VVAWGSLISGFVNNNRFSDAIEA 195
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD-ELLVINA 281
FR+MQS K NE +V LL C +C Y + +++ +
Sbjct: 196 FREMQSNGVKANETIMVDLLVACG----------------RCFDPYFQSKVGFNVILATS 239
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
+IDMY KC + AR +FD + +R +V+W ++I GY+Q+G+A ++L +F ML D
Sbjct: 240 LIDMYAKCGDLRTARYLFDGMP--ERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLG 295
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+ P+ T + A + G+ IHAYV + + D V L++ Y+K+GD + A
Sbjct: 296 IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESA 354
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-LLPDGITFLVMLYACSH 460
+ F++++ K+ ++WT +I G HG G EA+ +F+ M+++G PDGIT+L +LYACSH
Sbjct: 355 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 414
Query: 461 SGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWV 520
G+V+EG +YF+ M +G+ P EHY CMVD+L RAGR ++A +L++ MP+KP +W
Sbjct: 415 IGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWG 474
Query: 521 ALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTG 580
ALL+GC HEN++L + + + E E G Y LLSNIYA A RW DV IR MK
Sbjct: 475 ALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKR 534
Query: 581 IKKRPGCSWVQ 591
+ K G S V+
Sbjct: 535 VDKVLGHSSVE 545
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 180/414 (43%), Gaps = 60/414 (14%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM---MHEASKVFERMQKKDVVSWNAMVTGY 175
Q+HG ++S + +V + L+D C + A VFE + V WN+M+ GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
S+ + AL +++M + GY+ P+
Sbjct: 83 SNSPNPDKALIFYQEMLRK--------------GYS---------------------PDY 107
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
T +L C+ + + G H + +K + + V ++ MY C ++
Sbjct: 108 FTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN------MYVSTCLLHMYMCCGEVNYG 161
Query: 296 RAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
+F+ + NVV W ++I G+ + +D++E F +M Q VK N + L+A
Sbjct: 162 LRVFEDIP--QWNVVAWGSLISGFVNNNRFSDAIEAFREM--QSNGVKANETIMVDLLVA 217
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C GR Y +++ +V+ +A LID Y+K GD+ AR +FD M + VS
Sbjct: 218 C--------GRCFDPY-FQSKVGFNVI-LATSLIDMYAKCGDLRTARYLFDGMPERTLVS 267
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W S+ITGY +G EEA+ +F +M G+ PD +TFL ++ A G G + +S
Sbjct: 268 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 327
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
K G + +V++ + G + A K E + K + W ++ G H
Sbjct: 328 KT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASH 379
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 116/206 (56%), Gaps = 7/206 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV + +++ MY +CG L AR +FD M + LVSWNS++ Y Q+GD + AL +F
Sbjct: 233 NVILATSLIDMYAKCGDLRTARYLFDGMPERT---LVSWNSIITGYSQNGDAEEALCMF- 288
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M+D+ I D V+ ++V+ A G G+ +H + ++G +D + +LV+MYA
Sbjct: 289 --LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 346
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE-NIELDVVSWS 204
K G A K FE ++KKD ++W ++ G + G AL++F++M+E+ N D +++
Sbjct: 347 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 406
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCH 230
V+ + GL E F +M+ H
Sbjct: 407 GVLYACSHIGLVEEGQRYFAEMRDLH 432
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID---TYSKSGDIDVARVVF 405
I L C L L ++H ++++ +V+ ++ LID T ++ ++ AR VF
Sbjct: 9 ILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSR-LIDFCTTCPETMNLSYARSVF 64
Query: 406 DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVD 465
+++ + W S+I GY ++A+ ++EM ++G PD TF +L AC SG+ D
Sbjct: 65 ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC--SGLRD 122
Query: 466 EGIKYFSCMSKEYGVIPGEE----HYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVA 521
I++ SC+ + V G E C++ + G ++ +++ E +P + V W +
Sbjct: 123 --IQFGSCVHG-FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGS 178
Query: 522 LLSG 525
L+SG
Sbjct: 179 LISG 182
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 261/449 (58%), Gaps = 15/449 (3%)
Query: 169 NAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
N++++GYS G+F+ A LF+ ++ DVV+W+ +I G+ + G EA+ F +M+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMKK 197
Query: 229 CHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTK 288
NE+T+VS+L V + G+ H ++ +CD + + ++++DMY K
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET--GRVKCD---VFIGSSLVDMYGK 252
Query: 289 CKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFT 348
C A+ +FD + RNVVTWTA+I GY Q + + +F +MLK D V PN T
Sbjct: 253 CSCYDDAQKVFDEMP--SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD--VAPNEKT 308
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM 408
+S L ACA + AL GR +H Y+++N + + LID Y K G ++ A +VF+ +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTT-AGTTLIDLYVKCGCLEEAILVFERL 367
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
KN +WT++I G+ HG +A +F M + P+ +TF+ +L AC+H G+V+EG
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 469 KYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
+ F M + + P +HYACMVDL GR G L++A LIE MPM+P VVW AL C
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 529 HENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
H++ +LG++AA+++++L+ + G YTLL+N+Y+ ++ W +V R+R MK + K PG S
Sbjct: 488 HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Query: 589 WVQGKKGTATFFVGDRTHP-QSERMYAIL 616
W++ K F D P +S+ +Y L
Sbjct: 548 WIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 210/426 (49%), Gaps = 57/426 (13%)
Query: 8 SPWQFCSCCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSM 67
+P+QF + +V + L+S+ FV N++++ Y G D A ++FD +E D+V+W +M
Sbjct: 121 NPFQFHAH--IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFD---GAEDKDVVTWTAM 175
Query: 68 VAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVR 127
+ +V++G A+ F EM + + +++V+VL A + FG+ VHG +
Sbjct: 176 IDGFVRNGSASEAMVYFV---EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE 232
Query: 128 SGLFE-DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALT 186
+G + DVF+G+SLVDMY KC +A KVF+ M ++VV+W A++ GY F+ +
Sbjct: 233 TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML 292
Query: 187 LFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA 246
+FE+M + ++ PNE TL S+LS CA
Sbjct: 293 VFEEMLKSDV-----------------------------------APNEKTLSSVLSACA 317
Query: 247 SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD 306
VGAL G+ HCY IK + + +ID+Y KC + A +F+ + +
Sbjct: 318 HVGALHRGRRVHCYMIKNSIEINTTAG------TTLIDLYVKCGCLEEAILVFERL--HE 369
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
+NV TWTAMI G+A HG A D+ +LF ML V PN T L ACA + GR
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSS--HVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 367 EIHAYVL-RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYG 424
+ + R + + A C++D + + G ++ A+ + + M V W +L
Sbjct: 428 RLFLSMKGRFNMEPKADHYA-CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 425 MHGQGE 430
+H E
Sbjct: 487 LHKDYE 492
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
+H K+ HC + + Y R D L + + T AR + + + ++
Sbjct: 14 FLHLKQIHCLLLTSPIFYTRRD---LFLSRLLRRCCTAATQFRYARRLLCQL--QTLSIQ 68
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
W ++IG ++ N L + + V P+ T L A +L + + HA
Sbjct: 69 LWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
++++ DSD +V N LI YS SG D A +FD + K+ V+WT++I G+ +G
Sbjct: 128 HIVKFGLDSDP-FVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY-AC 489
EA+ F EM+K G+ + +T + +L A V G + + E G + + +
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG-RSVHGLYLETGRVKCDVFIGSS 245
Query: 490 MVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+VD+ G+ D A K+ + MP + V W AL++G
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAG 280
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 333/649 (51%), Gaps = 88/649 (13%)
Query: 49 MFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPA 108
+FDEM K D VSWN+M++ Y G + A LF M + D+ D S +L
Sbjct: 2 LFDEMPKR---DSVSWNTMISGYTSCGKLEDAWCLFTCM-KRSGSDV--DGYSFSRLLKG 55
Query: 109 FASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSW 168
AS+ + G+QVHG ++ G +V+VG+SLVDMYAKC + +A + F+ + + + VSW
Sbjct: 56 IASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 115
Query: 169 NAMVTGYSHI-----------------------GMFENALTLFE---------QMREENI 196
NA++ G+ + G F LTL + Q+ + +
Sbjct: 116 NALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL 175
Query: 197 EL----DVVSWSTVIAGYAQKG--------------------------------LGYEAL 220
+L ++ + +I+ YA G L A
Sbjct: 176 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 235
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
+F QMQ + + T LLS C+ I GK H IK L + N
Sbjct: 236 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGL------EQVTSATN 289
Query: 281 AIIDMYTKCKSISV--ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
A+I MY + + ++ A ++F+S+ KD +++W ++I G+AQ G + D+++ FS + +
Sbjct: 290 ALISMYIQFPTGTMEDALSLFESLKSKD--LISWNSIITGFAQKGLSEDAVKFFSYL--R 345
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
+K + + S L +C+ LA L+ G++IHA ++ + S+ +V + LI YSK G I
Sbjct: 346 SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE-FVISSLIVMYSKCGII 404
Query: 399 DVARVVFDNMKHKNA-VSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
+ AR F + K++ V+W ++I GY HG G+ ++ +F +M + + D +TF +L A
Sbjct: 405 ESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTA 464
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQV 517
CSH+G++ EG++ + M Y + P EHYA VDLLGRAG ++KA +LIE MP+ P +
Sbjct: 465 CSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPM 524
Query: 518 VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
V L CR +++ AN LLE+E E+ +Y LS++Y++ ++W++ ++ +MK
Sbjct: 525 VLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMK 584
Query: 578 HTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVL 626
G+KK PG SW++ + F DR++P + +Y ++ +L Q ++ L
Sbjct: 585 ERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWL 633
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 57/351 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L + +CNA+++ Y CG++ A+++FD + S+ DL+SWNSM+A + + +SA
Sbjct: 179 LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK--DLISWNSMIAGFSKHELKESAFE 236
Query: 83 LF---QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
LF Q+ W ++ D + +L A + FGK +HG ++ GL + N+
Sbjct: 237 LFIQMQRHW------VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNA 290
Query: 140 LVDMYAK--CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
L+ MY + G M +A +FE ++ KD++SWN+++TG++ G+ E+A+ F +R I+
Sbjct: 291 LISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIK 350
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+D ++S +LL C+ + L G++
Sbjct: 351 VDDYAFS-----------------------------------ALLRSCSDLATLQLGQQI 375
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H K + VI+++I MY+KC I AR F ++ K + V W AMI
Sbjct: 376 HALATKSGFVSNE------FVISSLIVMYSKCGIIESARKCFQQISSK-HSTVAWNAMIL 428
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
GYAQHG SL+LFSQM Q+ VK + T + L AC+ ++ G E+
Sbjct: 429 GYAQHGLGQVSLDLFSQMCNQN--VKLDHVTFTAILTACSHTGLIQEGLEL 477
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 18/143 (12%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SN FV ++++ MY +CG ++ AR+ F ++ S V+WN+M+ Y Q G + +L LF
Sbjct: 386 SNEFVISSLIVMYSKCGIIESARKCFQQI--SSKHSTVAWNAMILGYAQHGLGQVSLDLF 443
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGN------ 138
+M + +++LD V+ +L A + G G ++ L E V+
Sbjct: 444 S---QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL------NLMEPVYKIQPRMEHY 494
Query: 139 -SLVDMYAKCGMMHEASKVFERM 160
+ VD+ + G++++A ++ E M
Sbjct: 495 AAAVDLLGRAGLVNKAKELIESM 517
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 403 VVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
++FD M +++VSW ++I+GY G+ E+A +F M++ G DG +F +L +
Sbjct: 1 MLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA--- 57
Query: 463 MVDEGIKYFSCMSKEYG-VIPGEEHYAC-------MVDLLGRAGRLDKAMKLIEGMPMKP 514
+K F + +G VI G Y C +VD+ + R++ A + + + +P
Sbjct: 58 ----SVKRFDLGEQVHGLVIKG--GYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS-EP 110
Query: 515 GQVVWVALLSGCRKHENVK 533
V W AL++G + ++K
Sbjct: 111 NSVSWNALIAGFVQVRDIK 129
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 309/586 (52%), Gaps = 56/586 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV V +V+ MY CG L+ AR++FD + D V+WN+M+ +++ + L F+
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNR---DAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
M M VD S+V L + +GS+ GK +H + S D+ + N+L+DMY
Sbjct: 290 NML-MSGVDPTQFTYSIV--LNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYC 346
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
CG M EA VF R+ ++V SW++
Sbjct: 347 SCGDMREAFYVFGRIHNPNLV-----------------------------------SWNS 371
Query: 206 VIAGYAQKGLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
+I+G ++ G G +A+ ++R++ + +P+E T + +S A +HGK H K
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK- 430
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
L Y+R + V ++ MY K + A+ +FD + K+R+VV WT MI G+++ G
Sbjct: 431 -LGYER----SVFVGTTLLSMYFKNREAESAQKVFDVM--KERDVVLWTEMIVGHSRLGN 483
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ +++ F +M ++ + + F++S + AC+ +A LR G H +R +D V+ V
Sbjct: 484 SELAVQFFIEMYREKN--RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC-VMSV 540
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
L+D Y K+G + A +F + + W S++ Y HG E+A+ FE++ + G
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF 600
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
+PD +T+L +L ACSH G +G K+ KE G+ G +HY+CMV+L+ +AG +D+A+
Sbjct: 601 MPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEAL 659
Query: 505 KLIEGMPMKPGQV-VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
+LIE P Q +W LLS C N+++G +AA ++L+L+ E+ ++ LLSN+YA
Sbjct: 660 ELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVN 719
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWVQ-GKKGTATFFVGDRTHPQ 608
RW+DV +R ++ K PG SW++ T F GD+++P+
Sbjct: 720 GRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 237/537 (44%), Gaps = 70/537 (13%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA----LGL 83
+ N +++MY RC +L+ AR++FD+M + I L S V YV G + + LG
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGL-SAVFEYVSMGSSLHSQIIKLGS 81
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL---FEDVFVGNSL 140
FQ ++ M +I A S+V + S+ +Q+H + +G E + N+L
Sbjct: 82 FQMIFFMPLNEI---ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ MY +CG + +A KV F++M N V
Sbjct: 139 ISMYVRCGSLEQARKV-------------------------------FDKMPHRN----V 163
Query: 201 VSWSTVIAGYAQK-GLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
VS++ + + Y++ A + M + KPN T SL+ CA + ++ G +
Sbjct: 164 VSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNS 223
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
IK L Y D ++V +++ MY+ C + AR IFD V +R+ V W MI G
Sbjct: 224 QIIK--LGYS----DNVVVQTSVLGMYSSCGDLESARRIFDCV--NNRDAVAWNTMIVGS 275
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
++ + D L F ML V P FT S L C++L + G+ IHA ++ + +
Sbjct: 276 LKNDKIEDGLMFFRNMLMS--GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE- 438
D L + N L+D Y GD+ A VF + + N VSW S+I+G +G GE+A+ ++
Sbjct: 334 D-LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK---EYGVIPGEEHYACMVDLLG 495
+R PD TF + A + G ++K E V G ++ +
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG----TTLLSMYF 448
Query: 496 RAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGS 552
+ + A K+ + M + V+W ++ G H + E A +E+ E + S
Sbjct: 449 KNREAESAQKVFDVMKER-DVVLWTEMIVG---HSRLGNSELAVQFFIEMYREKNRS 501
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 28/295 (9%)
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM--IGGYAQHGEANDSLELFSQMLK 337
N +I MY +C S+ AR +FD + RN+VT + + Y G + L SQ++K
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMP--QRNIVTLFGLSAVFEYVSMGSS-----LHSQIIK 78
Query: 338 QDR-------SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD--SDVLYVANCL 388
+ A ++ C + L+ R+IHA VL ++ Y N L
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQ-GEEAVKVFEEMRKEGLLPD 447
I Y + G ++ AR VFD M H+N VS+ +L + Y + A + M E + P+
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG---RAGRLDKAM 504
TF ++ C+ V E + S ++ + + ++ +LG G L+ A
Sbjct: 199 SSTFTSLVQVCA----VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLG-EFAANKLLELESENDGSYTLLSN 558
++ + + + V W ++ G K++ ++ G F N L+ +Y+++ N
Sbjct: 255 RIFDCVNNRDA-VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 321/604 (53%), Gaps = 73/604 (12%)
Query: 43 LDHARQMFDEMYKSEIFDLV------SWNSMVAAYVQS-GDTKSALGLFQKMWEMVDVDI 95
+ A ++ D Y S +F + S+N M+ + D ++AL L+++M +
Sbjct: 68 IPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRM---KFSGL 124
Query: 96 QLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASK 155
+ D + V A A + G+ VH + GL DV + +SL+ MYAKCG + A K
Sbjct: 125 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 184
Query: 156 VFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
+F+ E E D VSW+++I+GY++ G
Sbjct: 185 LFD-----------------------------------EITERDTVSWNSMISGYSEAGY 209
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK--ETHCYTIKCILNYDRCDQ 273
+A+++FR+M+ +P+E TLVS+L C+ +G L G+ E T K L+
Sbjct: 210 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS------ 263
Query: 274 DELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFS 333
+ + +I MY KC + AR +F+ + KDR V WTAMI Y+Q+G+++++ +LF
Sbjct: 264 --TFLGSKLISMYGKCGDLDSARRVFNQMIKKDR--VAWTAMITVYSQNGKSSEAFKLFF 319
Query: 334 QMLKQDRSVKPNAFTISCSLMACARLAALRSGREI--HAYVLRNQYDSDVLYVANCLIDT 391
+M K V P+A T+S L AC + AL G++I HA L Q++ +YVA L+D
Sbjct: 320 EMEKT--GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN---IYVATGLVDM 374
Query: 392 YSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
Y K G ++ A VF+ M KN +W ++IT Y G +EA+ +F+ M + P ITF
Sbjct: 375 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 431
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
+ +L AC H+G+V +G +YF MS +G++P EHY ++DLL RAG LD+A + +E P
Sbjct: 432 IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 491
Query: 512 MKPGQVVWVALLSGCRKHENVKLGEFAANKLLEL-ESENDGSYTLLSNIYANARRWKDVT 570
KP +++ A+L C K ++V + E A L+E+ E++N G+Y + SN+ A+ + W +
Sbjct: 492 GKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESA 551
Query: 571 RIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDR----THPQSERMYAILTELIQRIKV- 625
++R+LM+ G+ K PGCSW++ + F G S ++ +L E ++R +
Sbjct: 552 KMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYE 611
Query: 626 LGYV 629
GY+
Sbjct: 612 FGYI 615
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 207/411 (50%), Gaps = 23/411 (5%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVD---MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGY 175
+Q F R FE+ G+ D + KC +++ ++ +M V N ++
Sbjct: 14 RQFPKFKPRQ--FEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKA 71
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA-LNVFRQMQSCHSKPN 234
+G F + LF E N S++ +I G +EA L+++R+M+ KP+
Sbjct: 72 VELGDFNYSSFLFSVTEEPN----HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPD 127
Query: 235 EVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
+ T + CA + + G+ H K L D + + +++I MY KC +
Sbjct: 128 KFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD------VHINHSLIMMYAKCGQVGY 181
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
AR +FD + +R+ V+W +MI GY++ G A D+++LF +M ++ +P+ T+ L
Sbjct: 182 ARKLFDEIT--ERDTVSWNSMISGYSEAGYAKDAMDLFRKM--EEEGFEPDERTLVSMLG 237
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
AC+ L LR+GR + + + ++ + LI Y K GD+D AR VF+ M K+ V
Sbjct: 238 ACSHLGDLRTGRLLEEMAITKKIGLST-FLGSKLISMYGKCGDLDSARRVFNQMIKKDRV 296
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
+WT++IT Y +G+ EA K+F EM K G+ PD T +L AC G ++ G K
Sbjct: 297 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETH 355
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+ E + +VD+ G+ GR+++A+++ E MP+K + W A+++
Sbjct: 356 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITA 405
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 181/380 (47%), Gaps = 56/380 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L +V + ++++ MY +CG + +AR++FDE+ + D VSWNSM++ Y ++G K A+
Sbjct: 159 LERDVHINHSLIMMYAKCGQVGYARKLFDEITER---DTVSWNSMISGYSEAGYAKDAMD 215
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+KM E + D +LV++L A + +G G+ + A+ + F+G+ L+
Sbjct: 216 LFRKMEE---EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 272
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + A +VF +M KKD V+W AM+T YS G A LF +M + + D +
Sbjct: 273 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 332
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
STV LS C SVGAL GK+ +
Sbjct: 333 LSTV-----------------------------------LSACGSVGALELGKQIETHAS 357
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ L Q + V ++DMY KC + A +F+++ K N TW AMI YA
Sbjct: 358 ELSL------QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK--NEATWNAMITAYAHQ 409
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-REIHAYVLRNQYDSDV 381
G A ++L LF +M SV P+ T L AC + G R H +
Sbjct: 410 GHAKEALLLFDRM-----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 464
Query: 382 LYVANCLIDTYSKSGDIDVA 401
+ N +ID S++G +D A
Sbjct: 465 EHYTN-IIDLLSRAGMLDEA 483
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N++V +V MYG+CG ++ A ++F+ M + + +WN+M+ AY G K AL
Sbjct: 361 LQHNIYVATGLVDMYGKCGRVEEALRVFEAM---PVKNEATWNAMITAYAHQGHAKEALL 417
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFG-KQVHGFAVRSGLFEDVFVGNSLV 141
LF +M + ++ + VL A G G + H + GL + +++
Sbjct: 418 LFDRM------SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNII 471
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH----IGMFENALTLFEQMREENIE 197
D+ ++ GM+ EA + ER K A + G H + + E A+ + +M+E
Sbjct: 472 DLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNA 531
Query: 198 LDVVSWSTVIA 208
+ V S V+A
Sbjct: 532 GNYVISSNVLA 542
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 193/591 (32%), Positives = 304/591 (51%), Gaps = 83/591 (14%)
Query: 61 LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
L+ +N M+ + L LF E+ + D +L VL + + G++
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFG---ELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
VHG+AV++GL D +V NSL+ MYA G + KVF+ M ++
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----------------- 110
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPNEVTLV 239
DVVSW+ +I+ Y G +A+ VF++M Q + K +E T+V
Sbjct: 111 ------------------DVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
S LS C+++ L G+ + + + + + + NA++DM+ KC + ARA+F
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTEF-------EMSVRIGNALVDMFCKCGCLDKARAVF 205
Query: 300 DSVAPKD-----------------------------RNVVTWTAMIGGYAQHGEANDSLE 330
DS+ K+ ++VV WTAM+ GY Q +++LE
Sbjct: 206 DSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
LF M Q ++P+ F + L CA+ AL G+ IH Y+ N+ D + V L+D
Sbjct: 266 LFRCM--QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV-VGTALVD 322
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
Y+K G I+ A VF +K ++ SWTSLI G M+G A+ ++ EM G+ D IT
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 451 FLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
F+ +L AC+H G V EG K F M++ + V P EH +C++DLL RAG LD+A +LI+ M
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 511 PMKPGQV---VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
+ + V+ +LLS R + NVK+ E A KL ++E + ++TLL+++YA+A RW+
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWE 502
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDR--THPQSERMYAIL 616
DVT +R MK GI+K PGCS ++ F VGD +HP+ + + ++L
Sbjct: 503 DVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 257/472 (54%), Gaps = 39/472 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L + +V N+++ MY G ++ ++FDEM + D+VSWN ++++YV +G + A+G
Sbjct: 77 LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR---DVVSWNGLISSYVGNGRFEDAIG 133
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLV 141
+F++M + + +++ D ++V+ L A +++ + G++++ F V FE V +GN+LV
Sbjct: 134 VFKRMSQ--ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE--FEMSVRIGNALV 189
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DM+ KCG + +A VF+ M+ K+V W +MV GY G + A LFE+ + DVV
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK----DVV 245
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
W+ ++ GY Q EAL +FR MQ+ +P+ LVSLL+GCA GAL GK H Y
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY- 304
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+N +R D+ +V A++DMY KC I A +F + K+R+ +WT++I G A
Sbjct: 305 ----INENRVTVDK-VVGTALVDMYAKCGCIETALEVFYEI--KERDTASWTSLIYGLAM 357
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI-HAYVLRNQYDSD 380
+G + +L+L+ +M ++ V+ +A T L AC + GR+I H+ R+
Sbjct: 358 NGMSGRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS----WTSLITGYGMHGQGEEAVKVF 436
+ + CLID ++G +D A + D M+ ++ + + SL++ +G + A +V
Sbjct: 416 SEHCS-CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 437 EEMRK-EGLLPDGITFLVMLYACSH---------SGMVDEGIKYF-SCMSKE 477
E++ K E T L +YA ++ M D GI+ F C S E
Sbjct: 475 EKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIE 526
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 22/282 (7%)
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+++ + M+ A L LF ++ Q + P+ FT+ L + RL + G +
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQ--GLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 368 IHAYVLRN--QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGM 425
+H Y ++ ++DS YV+N L+ Y+ G I++ VFD M ++ VSW LI+ Y
Sbjct: 68 VHGYAVKAGLEFDS---YVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 426 HGQGEEAVKVFEEMRKEGLLP-DGITFLVMLYACS--HSGMVDEGIKYFSCMSKEYGVIP 482
+G+ E+A+ VF+ M +E L D T + L ACS + + E I F E V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF-AANK 541
G +VD+ + G LDKA + + M K + W +++ G V G A
Sbjct: 185 GN----ALVDMFCKCGCLDKARAVFDSMRDKNVK-CWTSMVFG-----YVSTGRIDEARV 234
Query: 542 LLELESENDGS-YTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
L E D +T + N Y R+ + + M+ GI+
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 184/571 (32%), Positives = 301/571 (52%), Gaps = 59/571 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCG-ALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L ++ V N+++++Y + G + R++FD + + D +SW SM++ YV + AL
Sbjct: 92 LETDRNVGNSLLSLYFKLGPGMRETRRVFDGRF---VKDAISWTSMMSGYVTGKEHVKAL 148
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F EMV + + +L + + A + +G G+ HG + G + F+ ++L
Sbjct: 149 EVFV---EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+Y +A +VF+ M E DV+
Sbjct: 206 YLYGVNREPVDARRVFDEMP-----------------------------------EPDVI 230
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKETHCY 260
W+ V++ +++ L EAL +F M P+ T ++L+ C ++ L GKE H
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
I + + ++V ++++DMY KC S+ AR +F+ ++ K N V+W+A++GGY
Sbjct: 291 LITNGIGSN------VVVESSLLDMYGKCGSVREARQVFNGMSKK--NSVSWSALLGGYC 342
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
Q+GE ++E+F +M ++D + L ACA LAA+R G+EIH +R +
Sbjct: 343 QNGEHEKAIEIFREMEEKD------LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
V+ V + LID Y KSG ID A V+ M +N ++W ++++ +G+GEEAV F +M
Sbjct: 397 VI-VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
K+G+ PD I+F+ +L AC H+GMVDEG YF M+K YG+ PG EHY+CM+DLLGRAG
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENV-KLGEFAANKLLELESENDGSYTLLSNI 559
++A L+E + +W LL C + + ++ E A +++ELE + SY LLSN+
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNM 575
Query: 560 YANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
Y R D IR LM G+ K G SW+
Sbjct: 576 YKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 200/414 (48%), Gaps = 56/414 (13%)
Query: 114 SWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM-MHEASKVFERMQKKDVVSWNAMV 172
S+ G Q H V+SGL D VGNSL+ +Y K G M E +VF+ KD +SW +M+
Sbjct: 76 SFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMM 135
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
+GY +T E ++ AL VF +M S
Sbjct: 136 SGY---------VTGKEHVK--------------------------ALEVFVEMVSFGLD 160
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
NE TL S + C+ +G + G+ H I ++ + + + +Y +
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH------FISSTLAYLYGVNREP 214
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
AR +FD + D V+ WTA++ ++++ ++L LF M + + + P+ T
Sbjct: 215 VDARRVFDEMPEPD--VICWTAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTV 271
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L AC L L+ G+EIH ++ N S+V+ V + L+D Y K G + AR VF+ M KN
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVV-VESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
+VSW++L+ GY +G+ E+A+++F EM ++ L F +L AC+ V G +
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIHG 386
Query: 473 CMSKE--YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+ +G + E + ++DL G++G +D A ++ M ++ + W A+LS
Sbjct: 387 QYVRRGCFGNVIVE---SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLS 436
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 158/319 (49%), Gaps = 16/319 (5%)
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
EA+ + S SLL C V + IHG + H + +K L DR
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN------ 97
Query: 278 VINAIIDMYTKC-KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
V N+++ +Y K + R +FD KD ++WT+M+ GY E +LE+F +M+
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKD--AISWTSMMSGYVTGKEHVKALEVFVEMV 155
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+ N FT+S ++ AC+ L +R GR H V+ + ++ + ++++ L Y +
Sbjct: 156 --SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWN-HFISSTLAYLYGVNR 212
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGITFLVML 455
+ AR VFD M + + WT++++ + + EEA+ +F M R +GL+PDG TF +L
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 456 YACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPG 515
AC + + +G + + G+ + ++D+ G+ G + +A ++ GM K
Sbjct: 273 TACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKN 330
Query: 516 QVVWVALLSG-CRKHENVK 533
V W ALL G C+ E+ K
Sbjct: 331 SVSWSALLGGYCQNGEHEK 349
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 8/262 (3%)
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G+ +++ + + + P + + L C ++ + G + HA+V+++ ++D
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLY--ASLLQTCNKVFSFIHGIQFHAHVVKSGLETD-R 96
Query: 383 YVANCLIDTYSKSGD-IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
V N L+ Y K G + R VFD K+A+SWTS+++GY + +A++VF EM
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
GL + T + ACS G V G + F + +G + + L G
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHE--NVKLGEFAANKLLELESENDGSYTLLSNI 559
A ++ + MP +P + W A+LS K++ LG F A + + ++ +
Sbjct: 216 DARRVFDEMP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 560 YANARRWKDVTRIRSLMKHTGI 581
N RR K I + GI
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGI 296
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 303/572 (52%), Gaps = 61/572 (10%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQ-SGDT--KSAL 81
+++F+ N ++ Y + D A ++FDEM + ++V+WN ++ +Q GDT ++ L
Sbjct: 69 NSLFLQNKLLQAYTKIREFDDADKLFDEM---PLRNIVTWNILIHGVIQRDGDTNHRAHL 125
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
G F + ++ D+ LD VS + ++ + G Q+H V+ GL F SLV
Sbjct: 126 G-FCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
Y KCG++ EA +VFE + ++ D+V
Sbjct: 185 HFYGKCGLIVEARRVFEAV-----------------------------------LDRDLV 209
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSK--PNEVTLVSLLSGCASVGALIHGKETHC 259
W+ +++ Y G+ EA + + M S ++ + T SLLS C + GK+ H
Sbjct: 210 LWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHA 265
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
K +D + V A+++MY K +S AR F+S+ RNVV+W AMI G+
Sbjct: 266 ILFKVSYQFD------IPVATALLNMYAKSNHLSDARECFESMVV--RNVVSWNAMIVGF 317
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
AQ+GE +++ LF QML ++ ++P+ T + L +CA+ +A+ +++ A V + + +
Sbjct: 318 AQNGEGREAMRLFGQMLLEN--LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK-KGSA 374
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
D L VAN LI +YS++G++ A + F +++ + VSWTS+I HG EE++++FE M
Sbjct: 375 DFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM 434
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
++ L PD ITFL +L ACSH G+V EG++ F M++ Y + +EHY C++DLLGRAG
Sbjct: 435 LQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGF 493
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI 559
+D+A ++ MP +P A GC HE + ++ A KLLE+E +Y++LSN
Sbjct: 494 IDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNA 553
Query: 560 YANARRWKDVTRIRSLMKHTGIK-KRPGCSWV 590
Y + W +R + K PGCSW+
Sbjct: 554 YVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 193/412 (46%), Gaps = 64/412 (15%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V L S+ F ++V YG+CG + AR++F+ + DLV WN++V++YV +G
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR---DLVLWNALVSSYVLNG 222
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
A GL + M + + D + ++L A GKQ+H + D+
Sbjct: 223 MIDEAFGLLKLMGSDKN-RFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIP 277
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
V +L++MYAK + +A + FE M ++VVSWNAM+ G++ G A+ LF QM EN
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
++ P+E+T S+LS CA A+ K
Sbjct: 338 LQ-----------------------------------PDELTFASVLSSCAKFSAIWEIK 362
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+ K + D L V N++I Y++ ++S A F S+ D +V+WT++
Sbjct: 363 QVQAMVTK------KGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD--LVSWTSV 414
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-----REIHA 370
IG A HG A +SL++F ML++ ++P+ T L AC+ ++ G R
Sbjct: 415 IGALASHGFAEESLQMFESMLQK---LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
Y + + D Y CLID ++G ID A V ++M + + + TG
Sbjct: 472 YKIEAE---DEHYT--CLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 28/289 (9%)
Query: 246 ASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK 305
AS+ L K+ H + +K + + L + N ++ YTK + A +FD +
Sbjct: 47 ASLDHLSDVKQEHGFMVK------QGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPL- 99
Query: 306 DRNVVTWTAMIGGYAQH-GEANDSLEL----FSQMLKQDRSVKPNAFTISCSLMACARLA 360
RN+VTW +I G Q G+ N L S++L D S+ +F L C
Sbjct: 100 -RNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRL--CTDST 156
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
+++G ++H +++ +S + + L+ Y K G I AR VF+ + ++ V W +L+
Sbjct: 157 NMKAGIQLHCLMVKQGLESSC-FPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALV 215
Query: 421 TGYGMHGQGEEAVKVFEEM--RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK-E 477
+ Y ++G +EA + + M K D TF +L AC +++G + + + K
Sbjct: 216 SSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVS 271
Query: 478 YGV-IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
Y IP ++++ ++ L A + E M ++ V W A++ G
Sbjct: 272 YQFDIPVA---TALLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVG 316
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 302/606 (49%), Gaps = 58/606 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ +NV + + + + +AR++FD+ + + D NSM+ AY+++ +
Sbjct: 6 IETNVQIFTKFLVISASAVGIGYARKLFDQRPQRD--DSFLSNSMIKAYLETRQYPDSFA 63
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L++ + + + D + + + + + G Q+H R G D++V +VD
Sbjct: 64 LYRDLRK--ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAK G M A F+ M + VSW A+++GY G + A LF+QM DVV
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVI 178
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++ ++ G+ + G A +F +M T+++ + +IHG
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEM-------THKTVITWTT-------MIHG-------- 216
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
Y K I AR +FD++ +RN+V+W MIGGY Q+
Sbjct: 217 -----------------------YCNIKDIDAARKLFDAMP--ERNLVSWNTMIGGYCQN 251
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ + + LF +M + S+ P+ TI L A + AL G H +V R + D V
Sbjct: 252 KQPQEGIRLFQEM-QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKV- 309
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V ++D YSK G+I+ A+ +FD M K SW ++I GY ++G A+ +F M E
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE 369
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
PD IT L ++ AC+H G+V+EG K+F M +E G+ EHY CMVDLLGRAG L +
Sbjct: 370 EK-PDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKE 427
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A LI MP +P ++ + LS C ++++++ E K +ELE +NDG+Y LL N+YA
Sbjct: 428 AEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAA 487
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQR 622
+RW D ++++M+ KK GCS ++ + F GD THP ++ +L +L+
Sbjct: 488 DKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMH 547
Query: 623 IKVLGY 628
+ Y
Sbjct: 548 MNEEKY 553
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 210/432 (48%), Gaps = 73/432 (16%)
Query: 10 WQFCSCCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMV 68
W+F C ++++V VV MY + G + AR FDEM ++SE VSW +++
Sbjct: 105 WRFGFC---------ADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE----VSWTALI 151
Query: 69 AAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS 128
+ Y++ G+ A LF +M +
Sbjct: 152 SGYIRCGELDLASKLFDQMPHV-------------------------------------- 173
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLF 188
+DV + N+++D + K G M A ++F+ M K V++W M+ GY +I + A LF
Sbjct: 174 ---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLF 230
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCAS 247
+ M E N+ VSW+T+I GY Q E + +F++MQ+ S P++VT++S+L +
Sbjct: 231 DAMPERNL----VSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
GAL G+ HC+ + L+ ++ V AI+DMY+KC I A+ IFD + K
Sbjct: 287 TGALSLGEWCHCFVQRKKLD------KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-- 338
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
V +W AMI GYA +G A +L+LF M+ ++ KP+ T+ + AC + GR+
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIEE---KPDEITMLAVITACNHGGLVEEGRK 395
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMH 426
+V+R + + C++D ++G + A + NM N + +S ++ G +
Sbjct: 396 WF-HVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 427 GQGEEAVKVFEE 438
E A ++ ++
Sbjct: 455 KDIERAERILKK 466
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 274/503 (54%), Gaps = 27/503 (5%)
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
+H +R+ +D FV L+ + + + A VF + +V + AM+ G+ G
Sbjct: 94 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 153
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
+ ++L+ +M ++ D ++V+ L V R++ + ++
Sbjct: 154 SADGVSLYHRMIHNSVLPDNYVITSVLKAC--------DLKVCREIHA--------QVLK 197
Query: 241 LLSGCA-SVGAL---IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
L G + SVG I+GK K + +D + + +I+ Y++C I A
Sbjct: 198 LGFGSSRSVGLKMMEIYGKSGELVNAKKM--FDEMPDRDHVAATVMINCYSECGFIKEAL 255
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+F V KD V WTAMI G ++ E N +LELF +M Q +V N FT C L AC
Sbjct: 256 ELFQDVKIKD--TVCWTAMIDGLVRNKEMNKALELFREM--QMENVSANEFTAVCVLSAC 311
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+ L AL GR +H++V NQ +V N LI+ YS+ GDI+ AR VF M+ K+ +S+
Sbjct: 312 SDLGALELGRWVHSFV-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 370
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK 476
++I+G MHG EA+ F +M G P+ +T + +L ACSH G++D G++ F+ M +
Sbjct: 371 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 430
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGE 536
+ V P EHY C+VDLLGR GRL++A + IE +P++P ++ LLS C+ H N++LGE
Sbjct: 431 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 490
Query: 537 FAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGT 596
A +L E E+ + G+Y LLSN+YA++ +WK+ T IR M+ +GI+K PGCS ++
Sbjct: 491 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQI 550
Query: 597 ATFFVGDRTHPQSERMYAILTEL 619
F VGD HP E +Y L EL
Sbjct: 551 HEFLVGDIAHPHKEAIYQRLQEL 573
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 213/439 (48%), Gaps = 28/439 (6%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ + FV ++ + ++D+A +F + ++ + +M+ +V SG + + L
Sbjct: 104 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVY---LYTAMIDGFVSSGRSADGVSL 160
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
+ +M + + D + +VL A +++H ++ G VG ++++
Sbjct: 161 YHRM---IHNSVLPDNYVITSVLKA----CDLKVCREIHAQVLKLGFGSSRSVGLKMMEI 213
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y K G + A K+F+ M +D V+ M+ YS G + AL LF+ ++ + D V W
Sbjct: 214 YGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIK----DTVCW 269
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+ +I G + +AL +FR+MQ + NE T V +LS C+ +GAL G+ H +
Sbjct: 270 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF--- 326
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
+ R + V NA+I+MY++C I+ AR +F + +D++V+++ MI G A HG
Sbjct: 327 --VENQRMELSN-FVGNALINMYSRCGDINEARRVFRVM--RDKDVISYNTMISGLAMHG 381
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+ +++ F M+ +R +PN T+ L AC+ L G E+ + R +
Sbjct: 382 ASVEAINEFRDMV--NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIE 439
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
C++D + G ++ A +N+ + + +L++ +HG E K+ + + E
Sbjct: 440 HYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF-E 498
Query: 443 GLLPDGITFLVM--LYACS 459
PD T++++ LYA S
Sbjct: 499 SENPDSGTYVLLSNLYASS 517
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 267/489 (54%), Gaps = 42/489 (8%)
Query: 168 WNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
WN++V Y +G F A +F +M DV S++ +I GYA++G EAL ++ +M
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHP----DVSSFNVMIVGYAKQGFSLEALKLYFKMV 224
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
S +P+E T++SLL C + + GK H + I L++ NA++DMY
Sbjct: 225 SDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW----IERRGPVYSSNLILSNALLDMYF 280
Query: 288 KCKSISVARAIFDSVAPKD-----------------------------RNVVTWTAMIGG 318
KCK +A+ FD++ KD R++V+W +++ G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 319 YAQHG-EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
Y++ G + ELF +M ++ VKP+ T+ + A L GR +H V+R Q
Sbjct: 341 YSKKGCDQRTVRELFYEMTIVEK-VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE 437
D ++++ LID Y K G I+ A +VF K+ WTS+ITG HG G++A+++F
Sbjct: 400 KGDA-FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFG 458
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
M++EG+ P+ +T L +L ACSHSG+V+EG+ F+ M ++G P EHY +VDLL RA
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 498 GRLDKAMKLIE-GMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
GR+++A +++ MPM+P Q +W ++LS CR E+++ E A +LL+LE E +G Y LL
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLL 578
Query: 557 SNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDR-THPQSERMYAI 615
SNIYA RW + R M++ G+KK G S V G +G F ++ HP+ + I
Sbjct: 579 SNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRI 638
Query: 616 LTELIQRIK 624
L L +K
Sbjct: 639 LQHLYNEMK 647
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 221/426 (51%), Gaps = 28/426 (6%)
Query: 4 ASFLSPWQFCSCCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVS 63
+SFLS + C +V L+ ++ N++V Y G A ++F M D+ S
Sbjct: 143 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP---DVSS 199
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
+N M+ Y + G + AL L+ ++MV I+ D +++++L + GK VHG
Sbjct: 200 FNVMIVGYAKQGFSLEALKLY---FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 124 FAVRSGLF--EDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
+ R G ++ + N+L+DMY KC A + F+ M+KKD+ SWN MV G+ +G
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL-NVFRQMQSCHS-KPNEVTLV 239
E A +F+QM + D+VSW++++ GY++KG + +F +M KP+ VT+V
Sbjct: 317 EAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
SL+SG A+ G L HG+ H I+ L D + +A+IDMY KC I A +F
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDA------FLSSALIDMYCKCGIIERAFMVF 426
Query: 300 DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL 359
+ KD V WT+MI G A HG +L+LF +M Q+ V PN T+ L AC+
Sbjct: 427 KTATEKD--VALWTSMITGLAFHGNGQQALQLFGRM--QEEGVTPNNVTLLAVLTACSHS 482
Query: 360 AALRSGREIHAYVL-RNQYDSDVLYVANCLIDTYSKSGDIDVAR-VVFDNMKHKNAVS-W 416
+ G + ++ + +D + + + L+D ++G ++ A+ +V M + + S W
Sbjct: 483 GLVEEGLHVFNHMKDKFGFDPETEHYGS-LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMW 541
Query: 417 TSLITG 422
S+++
Sbjct: 542 GSILSA 547
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 312/601 (51%), Gaps = 59/601 (9%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V N+++ MY +L AR++FDEM + D++SW+ ++ +YVQS + L LF++M
Sbjct: 162 VQNSILCMYADSDSLS-ARKLFDEMSER---DVISWSVVIRSYVQSKEPVVGLKLFKEM- 216
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL-FEDVFVGNSLVDMYAKC 147
+ + + D V++ +VL A M G+ VHGF++R G DVFV NSL+DMY+K
Sbjct: 217 -VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKG 275
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
+ A +VF+ E ++VSW++++
Sbjct: 276 FDVDSAFRVFD-----------------------------------ETTCRNIVSWNSIL 300
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
AG+ EAL +F M + +EVT+VSLL C + K H I+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR---- 356
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
R + + ++++ID YT C + A + DS+ KD VV+ + MI G A G +++
Sbjct: 357 --RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKD--VVSCSTMISGLAHAGRSDE 412
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
++ +F M PNA T+ L AC+ A LR+ + H +R + + V
Sbjct: 413 AISIFCHMRDT-----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
++D Y+K G I++AR FD + KN +SWT +I+ Y ++G ++A+ +F+EM+++G P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+T+L L AC+H G+V +G+ F M +E P +HY+C+VD+L RAG +D A++LI
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK-PSLQHYSCIVDMLSRAGEIDTAVELI 586
Query: 508 EGMP--MKPGQVVWVALLSGCR-KHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
+ +P +K G W A+LSGCR + + + + ++LELE Y L S+ +A +
Sbjct: 587 KNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEK 646
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
W+DV +R L+K ++ G S V+ F GD+ + ++ L + +K
Sbjct: 647 SWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Query: 625 V 625
+
Sbjct: 707 L 707
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 196/401 (48%), Gaps = 57/401 (14%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
++VFVCN+++ MY + +D A ++FDE + ++VSWNS++A +V + AL +F
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDE---TTCRNIVSWNSILAGFVHNQRYDEALEMF 316
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
MV +++D V++V++L K +HG +R G + +SL+D Y
Sbjct: 317 HL---MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAY 373
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
C ++ +A V + M KDVVS + M++G +H G + A+++F MR+
Sbjct: 374 TSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD----------- 422
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
PN +T++SLL+ C+ L K H I+
Sbjct: 423 ---------------------------TPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
L +++ V +I+D Y KC +I +AR FD + K N+++WT +I YA +G
Sbjct: 456 SLAI-----NDISVGTSIVDAYAKCGAIEMARRTFDQITEK--NIISWTVIISAYAINGL 508
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ +L LF +M + + PNA T +L AC ++ G I ++ + + +
Sbjct: 509 PDKALALFDEM--KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY 566
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHK---NAVSWTSLITG 422
+ C++D S++G+ID A + N+ A +W ++++G
Sbjct: 567 S-CIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 200/438 (45%), Gaps = 83/438 (18%)
Query: 134 VFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
+F GNS+ D Y KCG + + F+ M +D VS
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVS-------------------------- 94
Query: 194 ENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIH 253
W+ ++ G G E L F +++ +PN TLV ++ C S+
Sbjct: 95 ---------WNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFD 143
Query: 254 GKETHCYTIK---CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
G++ H Y I+ C ++ V N+I+ MY S+S AR +FD ++ +R+V+
Sbjct: 144 GEKIHGYVIRSGFCGISS---------VQNSILCMYADSDSLS-ARKLFDEMS--ERDVI 191
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
+W+ +I Y Q E L+LF +M+ + ++ +P+ T++ L AC + + GR +H
Sbjct: 192 SWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT-EPDCVTVTSVLKACTVMEDIDVGRSVHG 250
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGE 430
+ +R +D ++V N LID YSK D+D A VFD +N VSW S++ G+ + + +
Sbjct: 251 FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD 310
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACS-----------HSGMVDEGIK---------- 469
EA+++F M +E + D +T + +L C H ++ G +
Sbjct: 311 EALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLI 370
Query: 470 --YFSC-MSKEYGVIPGEEHY------ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWV 520
Y SC + + G + Y + M+ L AGR D+A+ + M P + +
Sbjct: 371 DAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVI 430
Query: 521 ALLSGCRKHENVKLGEFA 538
+LL+ C +++ ++A
Sbjct: 431 SLLNACSVSADLRTSKWA 448
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 297/566 (52%), Gaps = 58/566 (10%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
V NA++TMY C + A +F+E + D V++N ++ +S L +F+KM
Sbjct: 226 VVNALITMYFNCQVVVDACLVFEET-DVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKML 283
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
E L VS++ A G QVHG A+++G
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAA------MGHQVHGLAIKTG------------------- 318
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+K +VS NA +T YS F A +FE + E+ D+V+W+T+I+
Sbjct: 319 -----------YEKYTLVS-NATMTMYSSFEDFGAAHKVFESLEEK----DLVTWNTMIS 362
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
Y Q LG A++V+++M KP+E T SLL+ + L + CI+ +
Sbjct: 363 SYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ-------ACIIKF 415
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
+ E + NA+I Y+K I A +F+ K N+++W A+I G+ +G +
Sbjct: 416 GLSSKIE--ISNALISAYSKNGQIEKADLLFERSLRK--NLISWNAIISGFYHNGFPFEG 471
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
LE FS +L+ + + P+A+T+S L C ++L G + HAYVLR+ + L + N L
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNAL 530
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-LLPD 447
I+ YS+ G I + VF+ M K+ VSW SLI+ Y HG+GE AV ++ M+ EG ++PD
Sbjct: 531 INMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPD 590
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
TF +L ACSH+G+V+EG++ F+ M + +GVI +H++C+VDLLGRAG LD+A L+
Sbjct: 591 AATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV 650
Query: 508 EGMPMKPGQV--VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARR 565
+ G VW AL S C H ++KLG+ A L+E E ++ Y LSNIYA A
Sbjct: 651 KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQ 591
WK+ R + G K+ GCSW++
Sbjct: 711 WKEAEETRRAINMIGAMKQRGCSWMR 736
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 230/465 (49%), Gaps = 24/465 (5%)
Query: 61 LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
L++ N + +SG+ ++AL LF + + +VSL + + FG Q
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLA--ITTARHLRDTIFGGQ 78
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
VH +A+RSGL V N+L+ +Y + G + K F+ + + DV SW +++ +G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
E A +F++M E + DV W+ +I G + G ++ +FR+M + ++ +
Sbjct: 139 IEYAFEVFDKMPERD---DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
+LS C G+L GK+ H IK V+NA+I MY C+ + A +F+
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASS------VVNALITMYFNCQVVVDACLVFE 248
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
R+ VT+ +I G A + ++SL +F +ML + S++P T S+M A
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKML--EASLRPTDLTF-VSVMGSCSCA 304
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
A+ G ++H ++ Y+ L V+N + YS D A VF++++ K+ V+W ++I
Sbjct: 305 AM--GHQVHGLAIKTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
+ Y G+ A+ V++ M G+ PD TF +L A S V E ++ +C+ K +G+
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-ATSLDLDVLEMVQ--ACIIK-FGL 417
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
E ++ + G+++KA L E ++ + W A++SG
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFE-RSLRKNLISWNAIISG 461
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 245/530 (46%), Gaps = 74/530 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V+ +++ + G +++A ++FD+M + + D+ WN+M+ +SG ++++ LF+
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERD--DVAIWNAMITGCKESGYHETSVELFR 179
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM + ++ D +L + GS FGKQVH +++G F V N+L+ MY
Sbjct: 180 ---EMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 146 KCGMMHEASKVFER--MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
C ++ +A VFE + +D V++N ++ G
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDG----------------------------- 266
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+AG+ + E+L VFR+M +P ++T VS++ C+ G + H IK
Sbjct: 267 ---LAGFKRD----ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIK 316
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
Y++ LV NA + MY+ + A +F+S+ KD +VTW MI Y Q
Sbjct: 317 T--GYEKYT----LVSNATMTMYSSFEDFGAAHKVFESLEEKD--LVTWNTMISSYNQAK 368
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
++ ++ +M VKP+ FT L L L + A +++ S +
Sbjct: 369 LGKSAMSVYKRM--HIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKI-E 422
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVF-----EE 438
++N LI YSK+G I+ A ++F+ KN +SW ++I+G+ +G E ++ F E
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
+R +LPD T +L C + + G + + + + +G ++++ + G
Sbjct: 483 VR---ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALINMYSQCG 538
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESE 548
+ ++++ M K V W +L+S +H GE A N ++ E
Sbjct: 539 TIQNSLEVFNQMSEKD-VVSWNSLISAYSRHGE---GENAVNTYKTMQDE 584
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 199/423 (47%), Gaps = 59/423 (13%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V NA +TMY A ++F+ + E DLV+WN+M+++Y Q+ KSA+ ++++
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESL---EEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M + ++ D + ++L + + V ++ GL + + N+L+ Y+K
Sbjct: 380 MH---IIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
G + +A +FER +K+++SWNA+++G+ H G L F + E + +
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI-------- 485
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
P+ TL +LLS C S +L+ G +TH Y ++
Sbjct: 486 -------------------------LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR--- 517
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
E L+ NA+I+MY++C +I + +F+ ++ KD VV+W ++I Y++HGE
Sbjct: 518 ---HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD--VVSWNSLISAYSRHGEGE 572
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
+++ + M + + V P+A T S L AC+ + G EI ++ + +
Sbjct: 573 NAVNTYKTMQDEGK-VIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS 631
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVS----WTSLITGYGMHGQ---GEEAVKVFEEM 439
CL+D ++G +D A + + K S W +L + HG G+ K+ E
Sbjct: 632 CLVDLLGRAGHLDEAESLV-KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 440 RKE 442
K+
Sbjct: 691 EKD 693
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 17 CLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD 76
C++ + L+S + + NA+++ Y + G ++ A +F+ + +L+SWN++++ + +G
Sbjct: 411 CIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK---NLISWNAIISGFYHNGF 467
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
L F + E +V I DA +L +L S S G Q H + +R G F++ +
Sbjct: 468 PFEGLERFSCLLES-EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLI 526
Query: 137 GNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE-N 195
GN+L++MY++CG + + +VF +M +KDVVSWN++++ YS G ENA+ ++ M++E
Sbjct: 527 GNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGK 586
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+ D ++S V++ + GL E L +F M H
Sbjct: 587 VIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFH 621
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 310/599 (51%), Gaps = 89/599 (14%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+VF A+V+MY + + A ++ DEM + I S N+ V+ +++G + A +F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGI---ASVNAAVSGLLENGFCRDAFRMFG 121
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
D + ++ V V G G Q+H A++SG +V+VG SLV MY+
Sbjct: 122 ------DARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYS 175
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+CG A+++FE++ K VV++NA ++G G+ ++F
Sbjct: 176 RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF----------------- 218
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
N+ R+ S +PN+VT V+ ++ CAS+ L +G++ H +K
Sbjct: 219 ---------------NLMRKFSS--EEPNDVTFVNAITACASLLNLQYGRQLHGLVMK-- 259
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD-RNVVTWTAMIGGYAQHGE 324
+ Q E +V A+IDMY+KC+ A +F + KD RN+++W ++I G +G+
Sbjct: 260 ----KEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL--KDTRNLISWNSVISGMMINGQ 313
Query: 325 ANDSLELFSQM----LKQDRS-----------------------------VKPNAFTISC 351
++ELF ++ LK D + + P+ ++
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM--K 409
L AC+ + L++G+EIH +V++ + D+ +V LID Y K G AR +FD K
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDI-FVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
K+ V W +I+GYG HG+ E A+++FE +R+E + P TF +L ACSH G V++G +
Sbjct: 433 PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 470 YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
F M +EYG P EH CM+DLLGR+GRL +A ++I+ M +P V+ +LL CR+H
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLLGSCRQH 551
Query: 530 ENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
+ LGE AA KL ELE EN + +LS+IYA RW+DV IR ++ + K PG S
Sbjct: 552 LDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
PN+ T LL CA +G ++ G+ H +K D + A++ MY K K +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVD------VFTATALVSMYMKVKQV 82
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+ A + D + +R + + A + G ++G D+ +F + N+ T++
Sbjct: 83 TDALKVLDEMP--ERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM--NSVTVASV 138
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L C + G ++H +++ ++ +V YV L+ YS+ G+ +A +F+ + HK+
Sbjct: 139 LGGCGD---IEGGMQLHCLAMKSGFEMEV-YVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRK-EGLLPDGITFLVMLYACS 459
V++ + I+G +G VF MRK P+ +TF+ + AC+
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 344 PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARV 403
PN FT L +CA+L + GR +HA V++ + DV + A L+ Y K + A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDV-FTATALVSMYMKVKQVTDALK 87
Query: 404 VFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGM 463
V D M + S + ++G +G +A ++F + R G + +T +L C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 464 VDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALL 523
++ G++ C++ + G +V + R G A ++ E +P K V + A +
Sbjct: 145 IEGGMQ-LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK-SVVTYNAFI 202
Query: 524 SGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
SG ++ + L N + + SE T ++ I A A
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 298/584 (51%), Gaps = 51/584 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ ++ V N+++ +Y +C + A+ +FD+M E D+VSWN+M++ Y G+ L
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM---EQRDMVSWNTMISGYASVGNMSEILK 231
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L ++ M ++ D + L +M G+ +H V++G D+ + +L+
Sbjct: 232 L---LYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KCG + +V E + KDV V
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDV-----------------------------------VC 313
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ +I+G + G +AL VF +M S + + S+++ CA +G+ G H Y +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ D +N++I MY KC + + IF+ + +R++V+W A+I GYAQ+
Sbjct: 374 RHGYTLDTP------ALNSLITMYAKCGHLDKSLVIFERM--NERDLVSWNAIISGYAQN 425
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ +L LF +M K + ++FT+ L AC+ AL G+ IH V+R+ +
Sbjct: 426 VDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS-FIRPCS 483
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V L+D YSK G ++ A+ FD++ K+ VSW LI GYG HG+G+ A++++ E
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS 543
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G+ P+ + FL +L +CSH+GMV +G+K FS M +++GV P EH AC+VDLL RA R++
Sbjct: 544 GMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIED 603
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A K + +P V +L CR + ++ + ++EL+ + G Y L + +A
Sbjct: 604 AFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAA 663
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTH 606
+RW DV+ + M+ G+KK PG S ++ T TFF+ +H
Sbjct: 664 MKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 248/504 (49%), Gaps = 58/504 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S+ ++ +++V +Y + G L HAR++F+EM + D+V W +M+ Y ++G A
Sbjct: 77 FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER---DVVHWTAMIGCYSRAGIVGEACS 133
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L EM I+ V+L+ +L + + +H FAV G D+ V NS+++
Sbjct: 134 LVN---EMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+Y KC + +A +F++M+++D+VSWN M++GY+ +G L L +MR + +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGL------ 241
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+P++ T + LS ++ L G+ HC +
Sbjct: 242 -----------------------------RPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + D + + A+I MY KC + + +++ KD VV WT MI G +
Sbjct: 273 KTGFDVD------MHLKTALITMYLKCGKEEASYRVLETIPNKD--VVCWTVMISGLMRL 324
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G A +L +FS+ML+ + A I+ + +CA+L + G +H YVLR+ Y D
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEA--IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR-K 441
+ N LI Y+K G +D + V+F+ M ++ VSW ++I+GY + +A+ +FEEM+ K
Sbjct: 383 AL-NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFK 441
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
D T + +L ACS +G + G K C+ + P +VD+ + G L+
Sbjct: 442 TVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 502 KAMKLIEGMPMKPGQVVWVALLSG 525
A + + + K V W L++G
Sbjct: 501 AAQRCFDSISWKD-VVSWGILIAG 523
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 315/621 (50%), Gaps = 76/621 (12%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
++V V N++++MY +CG + A +F+E+ D++S N+++ + +G + A G+
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELV---CRDVISSNAILNGFAANGMFEEAFGIL 380
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF-VGNSLVDM 143
+M + VD IQ D ++V++ + G+ VHG+ VR + V NS++DM
Sbjct: 381 NQM-QSVD-KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQ------------- 190
Y KCG+ +A +F+ +D+VSWN+M++ +S G A LF++
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 191 -----------------------------------MREENIE--LDVVSWSTVIAGYAQK 213
+R E + D+ SW++VI+G A
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 214 GLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
G E+L F+ M + + + +TL+ +S ++G ++ G+ H IK + D
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
Q N +I MY +CK I A +F ++ D N+ +W +I +Q+ + +LF
Sbjct: 619 Q------NTLITMYGRCKDIESAVKVFGLIS--DPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
+ ++PN T L A +L + G + H +++R + ++ +V+ L+D Y
Sbjct: 671 RNL-----KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP-FVSAALVDMY 724
Query: 393 SKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL-PDGITF 451
S G ++ VF N + +W S+I+ +G HG GE+A+++F+E+ + P+ +F
Sbjct: 725 SSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM- 510
+ +L ACSHSG +DEG+ Y+ M +++GV P EH +VD+LGRAG+L +A + I G+
Sbjct: 785 ISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIG 844
Query: 511 -PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDV 569
P K G VW ALLS C H + KLG+ A L E+E +N Y L+N Y W++
Sbjct: 845 EPQKAG--VWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEA 902
Query: 570 TRIRSLMKHTGIKKRPGCSWV 590
R+R +++ +KK PG S +
Sbjct: 903 VRLRKMVEDNALKKLPGYSVI 923
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 223/494 (45%), Gaps = 66/494 (13%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
++T YGR G L + +FDE+ + D++ WNSM+ A Q+G +A+GLF EM+
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEK---DVIVWNSMITALNQNGRYIAAVGLF---IEMIH 181
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
+ D+ +L+ A +S+ +H A+ +GL D + N+L+++YAK +
Sbjct: 182 KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSS 241
Query: 153 ASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
A VF M+ +D+VSWN ++T G +L F+ M E D V++S VI
Sbjct: 242 AECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI----- 296
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
S C+S+ L G+ H IK
Sbjct: 297 ------------------------------SACSSIEELTLGESLHGLVIKS----GYSP 322
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
+ + V N+II MY+KC A +F+ + +D V++ A++ G+A +G ++ +
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD--VISSNAILNGFAANGMFEEAFGIL 380
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
+QM D+ ++P+ T+ C L+ R GR +H Y +R + S L V N +ID Y
Sbjct: 381 NQMQSVDK-IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Query: 393 SKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFL 452
K G A ++F H++ VSW S+I+ + +G +A +F+E+ E
Sbjct: 440 GKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE---------- 489
Query: 453 VMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM 512
Y+CS + SC S + + H C L + G L A +E M
Sbjct: 490 ---YSCSKFSLSTVLAILTSCDSSDSLIFGKSVH--CW---LQKLGDLTSAFLRLETMSE 541
Query: 513 KPGQVVWVALLSGC 526
W +++SGC
Sbjct: 542 TRDLTSWNSVISGC 555
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 242/533 (45%), Gaps = 105/533 (19%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+CNA++ +Y + L A +F M E D+VSWN+++ + +G + +L F+ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHM---EHRDIVSWNTIMTKCLANGHPRKSLQYFKSM- 280
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFED--VFVGNSLVDMYAK 146
+ D V+ V+ A +S+ G+ +HG ++SG + V VGNS++ MY+K
Sbjct: 281 --TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSK 338
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
CG A VFE + +DV+S NA++ G++ GMFE A + QM+ +D +
Sbjct: 339 CGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ----SVDKI----- 389
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
+P+ T+VS+ S C + G+ H YT++ +
Sbjct: 390 -------------------------QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
L VIN++IDMY KC + A +F + +D +V+W +MI ++Q+G +
Sbjct: 425 -----QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD--LVSWNSMISAFSQNGFTH 477
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
+ LF +++ + K + T+ L +C +L G+ +H ++
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-------------- 523
Query: 387 CLIDTYSKSGDIDVARVVFDNMKH-KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-L 444
K GD+ A + + M ++ SW S+I+G G E+++ F+ M +EG +
Sbjct: 524 ------QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKI 577
Query: 445 LPDGITFLVMLYACSHSGMVDEG-------IK----------------YFSCMSKE---- 477
D IT L + A + G+V +G IK Y C E
Sbjct: 578 RHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK 637
Query: 478 -YGVI--PGEEHYACMVDLL--GRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+G+I P + C++ L +AGR + +L + ++P ++ +V LLS
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGR--EVFQLFRNLKLEPNEITFVGLLSA 688
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 176/387 (45%), Gaps = 47/387 (12%)
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF ++ E + ++ + L +VL +F + VH FA++ GL +D+ + L+
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
Y + G + +S +F+ +++KDV+ WN+M+T + G + A+ LF +M + E D +
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ + + C S+L HC I
Sbjct: 191 LLLAASALSSL----------HLSRKC----------SML---------------HCLAI 215
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ L D + NA++++Y K +++S A +F + + R++V+W ++ +
Sbjct: 216 ETGLVGDSS------LCNALMNLYAKGENLSSAECVFTHM--EHRDIVSWNTIMTKCLAN 267
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV- 381
G SL+ F M + + + T SC + AC+ + L G +H V+++ Y +
Sbjct: 268 GHPRKSLQYFKSMTGSGQ--EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ V N +I YSK GD + A VF+ + ++ +S +++ G+ +G EEA + +M+
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS 385
Query: 442 -EGLLPDGITFLVMLYACSHSGMVDEG 467
+ + PD T + + C EG
Sbjct: 386 VDKIQPDIATVVSITSICGDLSFSREG 412
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 252/480 (52%), Gaps = 52/480 (10%)
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L M G++ A+KVF M +K+VV W +M+ GY + L + + + E D
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGY----LLNKDLVSARRYFDLSPERD 89
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
+V W+T+I+GY + G EA ++F QM C
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQM-PCR----------------------------- 119
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
+++ N +++ Y + +FD + +RNV +W +I GY
Sbjct: 120 ---------------DVMSWNTVLEGYANIGDMEACERVFDDMP--ERNVFSWNGLIKGY 162
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
AQ+G ++ L F +M+ + SV PN T++ L ACA+L A G+ +H Y Y+
Sbjct: 163 AQNGRVSEVLGSFKRMVDEG-SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
+ V N LID Y K G I++A VF +K ++ +SW ++I G HG G EA+ +F EM
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
+ G+ PD +TF+ +L AC H G+V++G+ YF+ M ++ ++P EH C+VDLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI 559
L +A++ I MP+K V+W LL + ++ V +GE A +L++LE N ++ +LSNI
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 560 YANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTEL 619
Y +A R+ D R++ M+ TG KK G SW++ G F+ HP++E + IL EL
Sbjct: 402 YGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 17/325 (5%)
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMR 192
D+ + N+++ Y + G M EA +F++M +DV+SWN ++ GY++IG E +F+ M
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 193 EENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGAL 251
E N V SW+ +I GYAQ G E L F++M S PN+ T+ +LS CA +GA
Sbjct: 149 ERN----VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVT 311
GK H Y L Y++ D + V NA+IDMY KC +I +A +F + K R++++
Sbjct: 205 DFGKWVHKYGET--LGYNKVDVN---VKNALIDMYGKCGAIEIAMEVFKGI--KRRDLIS 257
Query: 312 WTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAY 371
W MI G A HG ++L LF +M ++ + P+ T L AC + + G
Sbjct: 258 WNTMINGLAAHGHGTEALNLFHEM--KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNS 315
Query: 372 VLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGE 430
+ + + C++D S++G + A + M K +AV W +L+ ++ + +
Sbjct: 316 MFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Query: 431 EAVKVFEEMRKEGLLPDGITFLVML 455
EE+ K L P VML
Sbjct: 376 IGEVALEELIK--LEPRNPANFVML 398
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 10/223 (4%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V N V+ Y G ++ ++FD+M + +F SWN ++ Y Q+G LG F+
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVF---SWNGLIKGYAQNGRVSEVLGSFK 176
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVDMY 144
+M + V + DA ++ VL A A +G++ FGK VH + G + DV V N+L+DMY
Sbjct: 177 RMVDEGSV-VPNDA-TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
KCG + A +VF+ ++++D++SWN M+ G + G AL LF +M+ I D V++
Sbjct: 235 GKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFV 294
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT----LVSLLS 243
V+ GL + L F M + S E+ +V LLS
Sbjct: 295 GVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLS 337
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 254/480 (52%), Gaps = 50/480 (10%)
Query: 190 QMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA--- 246
Q ++ VSW++ I + G EA F M +PN +T ++LLSGC
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 247 ----SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV 302
++G L+HG C L DR + ++V AII MY+K AR +FD +
Sbjct: 86 SGSEALGDLLHG-------YACKLGLDR---NHVMVGTAIIGMYSKRGRFKKARLVFDYM 135
Query: 303 APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD----------------------- 339
+D+N VTW MI GY + G+ +++ ++F +M ++D
Sbjct: 136 --EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLW 193
Query: 340 ------RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYS 393
VKP+ I +L AC L AL G +H YVL + ++V V+N LID Y
Sbjct: 194 FREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNV-RVSNSLIDLYC 252
Query: 394 KSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLV 453
+ G ++ AR VF NM+ + VSW S+I G+ +G E++ F +M+++G PD +TF
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 454 MLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK 513
L ACSH G+V+EG++YF M +Y + P EHY C+VDL RAGRL+ A+KL++ MPMK
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 514 PGQVVWVALLSGCRKH-ENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRI 572
P +VV +LL+ C H N+ L E L +L ++ +Y +LSN+YA +W+ +++
Sbjct: 373 PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKM 432
Query: 573 RSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPET 632
R MK G+KK+PG S ++ F GD H ++ + +L + +++ G V ET
Sbjct: 433 RRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 206/390 (52%), Gaps = 23/390 (5%)
Query: 44 DHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLV 103
+HA +S VSW S + ++G A F +M ++ + ++ +
Sbjct: 19 NHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFS---DMTLAGVEPNHITFI 75
Query: 104 NVLPA---FASMGSWWFGKQVHGFAVRSGLFED-VFVGNSLVDMYAKCGMMHEASKVFER 159
+L F S GS G +HG+A + GL + V VG +++ MY+K G +A VF+
Sbjct: 76 ALLSGCGDFTS-GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDY 134
Query: 160 MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA 219
M+ K+ V+WN M+ GY G +NA +F++M E D++SW+ +I G+ +KG EA
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEA 190
Query: 220 LNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVI 279
L FR+MQ KP+ V +++ L+ C ++GAL G H Y +L+ D ++ + V
Sbjct: 191 LLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY----VLSQDF--KNNVRVS 244
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
N++ID+Y +C + AR +F ++ + R VV+W ++I G+A +G A++SL F +M Q+
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKM--QE 300
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
+ KP+A T + +L AC+ + + G + + S + CL+D YS++G ++
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 400 VARVVFDNMKHK-NAVSWTSLITGYGMHGQ 428
A + +M K N V SL+ HG
Sbjct: 361 DALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 132/262 (50%), Gaps = 39/262 (14%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
++ + N N ++ Y R G +D+A +MFD+M + DL+SW +M+ +V+ G + A
Sbjct: 134 YMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER---DLISWTAMINGFVKKGYQEEA 190
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
L F+ EM ++ D V+++ L A ++G+ FG VH + + +V V NSL
Sbjct: 191 LLWFR---EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+D+Y +CG + A +VF M+K+ VVSWN+++ G++ G +L F +M+E+ + D
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQM---------------------------------Q 227
V+++ + + GL E L F+ M Q
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 228 SCHSKPNEVTLVSLLSGCASVG 249
S KPNEV + SLL+ C++ G
Sbjct: 368 SMPMKPNEVVIGSLLAACSNHG 389
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 274/537 (51%), Gaps = 72/537 (13%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
KQ H + + +GL D ++ + G + A VF + N M+
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI------ 85
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
AL+L ++ +I A+ V+R++ + +KP+ T
Sbjct: 86 ----RALSLLDEPNAHSI----------------------AITVYRKLWALCAKPDTFTF 119
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
+L V + G++ H + + +D + V+ +I MY C + AR +
Sbjct: 120 PFVLKIAVRVSDVWFGRQIHGQVV--VFGFD----SSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 299 FDSVAPKD-------------------------------RNVVTWTAMIGGYAQHGEAND 327
FD + KD RN V+WT +I GYA+ G A++
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
++E+F +ML ++ V+P+ T+ L ACA L +L G I +YV + V + N
Sbjct: 234 AIEVFQRMLMEN--VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV-SLNNA 290
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
+ID Y+KSG+I A VF+ + +N V+WT++I G HG G EA+ +F M K G+ P+
Sbjct: 291 VIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+TF+ +L ACSH G VD G + F+ M +YG+ P EHY CM+DLLGRAG+L +A ++I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
+ MP K +W +LL+ H +++LGE A ++L++LE N G+Y LL+N+Y+N RW
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 568 DVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIK 624
+ +R++MK G+KK G S ++ + F GD THPQ ER++ IL E+ +I+
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 192/368 (52%), Gaps = 26/368 (7%)
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
A+ +++K+W + + D + VL + WFG+Q+HG V G V V
Sbjct: 100 AITVYRKLWALC---AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM----REEN 195
L+ MY CG + +A K+F+ M KDV WNA++ GY +G + A +L E M R E
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNE- 215
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
VSW+ VI+GYA+ G EA+ VF++M + +P+EVTL+++LS CA +G+L G+
Sbjct: 216 -----VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
Y R + + NA+IDMY K +I+ A +F+ V +RNVVTWT +
Sbjct: 271 RICSYV------DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV--NERNVVTWTTI 322
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I G A HG ++L +F++M+K V+PN T L AC+ + + G+ + +R+
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKA--GVRPNDVTFIAILSACSHVGWVDLGKRLFNS-MRS 379
Query: 376 QYD-SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAV 433
+Y + C+ID ++G + A V +M K NA W SL+ +H E
Sbjct: 380 KYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGE 439
Query: 434 KVFEEMRK 441
+ E+ K
Sbjct: 440 RALSELIK 447
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 59/329 (17%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+L +V V NA++ YG+ G +D AR + EM + + VSW +++ Y +SG A+
Sbjct: 177 MLVKDVNVWNALLAGYGKVGEMDEARSLL-EMMPCWVRNEVSWTCVISGYAKSGRASEAI 235
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+FQ+ M+ +++ D V+L+ VL A A +GS G+++ + G+ V + N+++
Sbjct: 236 EVFQR---MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMYAK G + +A VFE + +++VV+W ++ G + G AL +F +M + +
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGV----- 347
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC-- 259
+PN+VT +++LS C+ VG + GK
Sbjct: 348 ------------------------------RPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 260 ---YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
Y I + + C +ID+ + + A + S+ P N W +++
Sbjct: 378 RSKYGIHPNIEHYGC----------MIDLLGRAGKLREADEVIKSM-PFKANAAIWGSLL 426
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPN 345
H + LEL + L + ++PN
Sbjct: 427 AASNVHHD----LELGERALSELIKLEPN 451
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 269/518 (51%), Gaps = 72/518 (13%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
K+++ + GL + F+ +VD K M A+++F ++ +V +N+++ Y+H
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
++ + + +++Q+ ++ EL P+ T
Sbjct: 87 SLYCDVIRIYKQLLRKSFEL----------------------------------PDRFTF 112
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
+ CAS+G+ GK+ H + K + ++ NA+IDMY K + A +
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLCKFGPRF------HVVTENALIDMYMKFDDLVDAHKV 166
Query: 299 FDSVAPK-----------------------------DRNVVTWTAMIGGYAQHGEANDSL 329
FD + + D+ +V+WTAMI GY G +++
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
+ F +M Q ++P+ ++ L +CA+L +L G+ IH Y R + V N LI
Sbjct: 227 DFFREM--QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT-GVCNALI 283
Query: 390 DTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI 449
+ YSK G I A +F M+ K+ +SW+++I+GY HG A++ F EM++ + P+GI
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 450 TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
TFL +L ACSH GM EG++YF M ++Y + P EHY C++D+L RAG+L++A+++ +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 510 MPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDV 569
MPMKP +W +LLS CR N+ + A + L+ELE E+ G+Y LL+NIYA+ +W+DV
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
Query: 570 TRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHP 607
+R+R ++++ +KK PG S ++ F GD + P
Sbjct: 464 SRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 218/401 (54%), Gaps = 22/401 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + F+ +V + +D+A ++F+++ +F +NS++ AY + +
Sbjct: 38 LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVF---LYNSIIRAYTHNSLYCDVIR 94
Query: 83 LFQKMWEMVDVDIQL-DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+++ +++ +L D + + + AS+GS + GKQVHG + G V N+L+
Sbjct: 95 IYK---QLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALI 151
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMY K + +A KVF+ M ++DV+SWN++++GY+ +G + A LF M ++ I V
Sbjct: 152 DMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI----V 207
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
SW+ +I+GY G EA++ FR+MQ +P+E++L+S+L CA +G+L GK H Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ R + V NA+I+MY+KC IS A +F + KD V++W+ MI GYA
Sbjct: 268 ER------RGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD--VISWSTMISGYAY 319
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
HG A+ ++E F++M Q VKPN T L AC+ + + G + ++
Sbjct: 320 HGNAHGAIETFNEM--QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLIT 421
+ CLID +++G ++ A + M K ++ W SL++
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 203/654 (31%), Positives = 306/654 (46%), Gaps = 90/654 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N+ CNA++T Y +C ++ A +F EM K ++VSW M+ A G ++ A+ LF
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPK----NVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M E + VS ++ G KQV A+ S DV N+++ Y
Sbjct: 163 EMPER-------NVVSWNTLVTGLIRNGDMEKAKQVFD-AMPS---RDVVSWNAMIKGYI 211
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ M EA +F M +K+VV+W +MV GY G A LF +M E NI VSW+
Sbjct: 212 ENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTA 267
Query: 206 VIAGYAQKGLGYEALNVFRQMQSC--HSKPNEVTLVSLLSGCASVGALIH--GKETHCYT 261
+I+G+A L EAL +F +M+ PN TL+SL C +G G++ H
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 262 IKCILNYDRCDQD----------------------------ELLVINAIIDMYTKCKSIS 293
I ++ D D +L N II+ Y K +
Sbjct: 328 ISN--GWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLE 385
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR------------- 340
A +F+ V + V+WT+MI GY + G+ + + LF ++ +D
Sbjct: 386 RAETLFERVKSL-HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 341 ----------------SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ--YDSDVL 382
+KP T S L + + L G+ IH + + YD D L
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD-L 503
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+ N L+ Y+K G I+ A +F M K+ VSW S+I G HG ++A+ +F+EM
Sbjct: 504 ILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDS 563
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
G P+ +TFL +L ACSHSG++ G++ F M + Y + PG +HY M+DLLGRAG+L +
Sbjct: 564 GKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Query: 503 AMKLIEGMPMKPGQVVWVALLSGC----RKHENVKLGEFAANKLLELESENDGSYTLLSN 558
A + I +P P V+ ALL C R + + E AA +LLEL+ N + L N
Sbjct: 624 AEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCN 683
Query: 559 IYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERM 612
+YA R +R M G+KK PGCSWV F GD++ ++ +M
Sbjct: 684 VYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 190/440 (43%), Gaps = 87/440 (19%)
Query: 127 RSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALT 186
+ G V SL+ YAK G + EA +FE M ++++V+ NAM+TGY A T
Sbjct: 70 QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWT 129
Query: 187 LFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA 246
LF +M + +VVSW+ ++ G +A+ +F +M + N V+ +L++G
Sbjct: 130 LFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEM----PERNVVSWNTLVTGLI 180
Query: 247 SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK- 305
G + K+ +D +++ NA+I Y + + A+ +F ++ K
Sbjct: 181 RNGDMEKAKQV----------FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN 230
Query: 306 ----------------------------DRNVVTWTAMIGGYAQHGEANDSLELFSQMLK 337
+RN+V+WTAMI G+A + ++L LF +M K
Sbjct: 231 VVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Query: 338 QDRSVKPNAFTISCSLMACARLAA--LRSGREIHAYVLRNQY------------------ 377
+V PN T+ AC L R G ++HA V+ N +
Sbjct: 291 DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYA 350
Query: 378 -------------DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH-KNAVSWTSLITGY 423
+S L N +I+ Y K+GD++ A +F+ +K + VSWTS+I GY
Sbjct: 351 SSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGY 410
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
G A +F+++ + DG+T+ VM+ + + E S M + G+ P
Sbjct: 411 LEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVR-CGLKPL 465
Query: 484 EEHYACMVDLLGRAGRLDKA 503
Y+ ++ G LD+
Sbjct: 466 NSTYSVLLSSAGATSNLDQG 485
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+ Y+K+G +D ARV+F+ M +N V+ +++TGY + EA +F EM K +
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----N 137
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+++ VML A G ++ ++ F M + V + +V L R G ++KA ++
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNVV-----SWNTLVTGLIRNGDMEKAKQVF 192
Query: 508 EGMPMKPGQVVWVALLSG 525
+ MP + V W A++ G
Sbjct: 193 DAMPSRD-VVSWNAMIKG 209
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 257/466 (55%), Gaps = 51/466 (10%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G +VH L ++ + + LV +YA CG A +VF+RM K+D +
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPF--------- 161
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+W+++I+GYA+ G +A+ ++ QM KP+ T
Sbjct: 162 ------------------------AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFT 197
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+L C +G++ G+ H +K YD + V+NA++ MY KC I AR
Sbjct: 198 FPRVLKACGGIGSVQIGEAIHRDLVKEGFGYD------VYVLNALVVMYAKCGDIVKARN 251
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD + KD V+W +M+ GY HG +++L++F M++ ++P+ IS L A
Sbjct: 252 VFDMIPHKD--YVSWNSMLTGYLHHGLLHEALDIFRLMVQN--GIEPDKVAISSVL---A 304
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
R+ + + GR++H +V+R + + L VAN LI YSK G + A +FD M ++ VSW
Sbjct: 305 RVLSFKHGRQLHGWVIRRGMEWE-LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
++I+ H + +K FE+M + PDGITF+ +L C+++GMV++G + FS MSKE
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLI-EGMPMKPGQVVWVALLSGCRKHENVKLGE 536
YG+ P EHYACMV+L GRAG +++A +I + M ++ G VW ALL C H N +GE
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGE 480
Query: 537 FAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
AA +L ELE +N+ ++ LL IY+ A+R +DV R+R +M G++
Sbjct: 481 VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 220/465 (47%), Gaps = 75/465 (16%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSA 80
++L +N+ + + +V +Y CG + A ++FD M K + +WNS+++ Y + G + A
Sbjct: 121 YLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPF-AWNSLISGYAELGQYEDA 179
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ L+ ++M + ++ D + VL A +GS G+ +H V+ G DV+V N+L
Sbjct: 180 MALY---FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNAL 236
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
V MYAKCG + +A VF+ + KD VSWN+M+TGY H G+ AL +F M + IE D
Sbjct: 237 VVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK 296
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V+ S+V+ A V + HG++ H +
Sbjct: 297 VAISSVL--------------------------------------ARVLSFKHGRQLHGW 318
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
I+ R + EL V NA+I +Y+K + A IFD + +R+ V+W A+I +
Sbjct: 319 VIR------RGMEWELSVANALIVLYSKRGQLGQACFIFDQML--ERDTVSWNAII---S 367
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY--D 378
H + ++ L+ F QM + + KP+ T L CA + G + + ++ +Y D
Sbjct: 368 AHSKNSNGLKYFEQMHRAN--AKPDGITFVSVLSLCANTGMVEDGERLFS-LMSKEYGID 424
Query: 379 SDVLYVANCLIDTYSKSGDIDVA--RVVFDNMKHKNAVSWTSLITGYGMHGQ---GEEAV 433
+ + A C+++ Y ++G ++ A +V + W +L+ +HG GE A
Sbjct: 425 PKMEHYA-CMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAA 483
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSG---------MVDEGIK 469
+ E+ + L+ +Y+ + MVD G++
Sbjct: 484 QRLFELEPDN--EHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 25/352 (7%)
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
SLL C S+ A+ HG H +L ++ L + + ++ +Y C VA
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLL------RNNLGISSKLVRLYASCGYAEVAHE 148
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+FD ++ +D + W ++I GYA+ G+ D++ L+ QM + VKP+ FT L AC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQM--AEDGVKPDRFTFPRVLKACG 206
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
+ +++ G IH +++ + DV YV N L+ Y+K GDI AR VFD + HK+ VSW
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDV-YVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI---TFLVMLYACSHSGMVDEGIKYFSCM 474
S++TGY HG EA+ +F M + G+ PD + + L + + H G G M
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH-GRQLHGWVIRRGM 324
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKL 534
E V ++ L + G+L +A + + M ++ V W A++S K+ N
Sbjct: 325 EWELSVA------NALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSN--- 374
Query: 535 GEFAANKLLELESENDG-SYTLLSNIYANARRWKDVTRIRSLM-KHTGIKKR 584
G ++ ++ DG ++ + ++ AN +D R+ SLM K GI +
Sbjct: 375 GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK 426
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 299/571 (52%), Gaps = 57/571 (9%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SN+ + + ++ +Y + G + HAR++FD + K D+VSW +M++ + + G AL LF
Sbjct: 45 SNLQLKDMLIDLYLKQGDVKHARKLFDRISKR---DVVSWTAMISRFSRCGYHPDALLLF 101
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+ EM D++ + + +VL + +G G Q+HG + ++ V ++L+ +Y
Sbjct: 102 K---EMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLY 158
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
A+CG M EA R+Q F+ M+E D+VSW+
Sbjct: 159 ARCGKMEEA-----RLQ--------------------------FDSMKER----DLVSWN 183
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
+I GY + ++F+ M + KP+ T SLL V L E H IK
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIK- 242
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
L + R +I ++++ Y KC S++ A + + K R++++ TA+I G++Q
Sbjct: 243 -LGFGRSSA----LIRSLVNAYVKCGSLANAWKLHE--GTKKRDLLSCTALITGFSQQNN 295
Query: 325 -ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+D+ ++F M++ K + +S L C +A++ GR+IH + L++ +
Sbjct: 296 CTSDAFDIFKDMIRM--KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
+ N LID Y+KSG+I+ A + F+ MK K+ SWTSLI GYG HG E+A+ ++ M E
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ P+ +TFL +L ACSH+G + G K + M ++G+ EEH +C++D+L R+G L++A
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 504 MKLI---EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
LI EG+ + W A L CR+H NV+L + AA +LL +E +Y L+++Y
Sbjct: 474 YALIRSKEGI-VSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 532
Query: 561 ANARRWKDVTRIRSLMKHTG-IKKRPGCSWV 590
A W + R LMK +G K PG S V
Sbjct: 533 AANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 196/418 (46%), Gaps = 60/418 (14%)
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
+HG ++ +G ++ + + L+D+Y K G + A K+F+R+ K+DVVSW AM++ +S G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
+AL LF++M E++ K N+ T S
Sbjct: 94 HPDALLLFKEMHREDV-----------------------------------KANQFTYGS 118
Query: 241 LLSGCASVGALIHGKETHCYTIK--CILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
+L C +G L G + H K C N L+V +A++ +Y +C + AR
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGN--------LIVRSALLSLYARCGKMEEARLQ 170
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
FDS+ K+R++V+W AMI GY + A+ S LF ML + + KP+ FT L A
Sbjct: 171 FDSM--KERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK--KPDCFTFGSLLRASIV 226
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
+ L E+H ++ + + + L++ Y K G + A + + K ++ +S T+
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSALIRS-LVNAYVKCGSLANAWKLHEGTKKRDLLSCTA 285
Query: 419 LITGYGMHGQ-GEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG--IKYFSCMS 475
LITG+ +A +F++M + D + ML C+ V G I F+ S
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 476 KE--YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
+ + V G ++D+ ++G ++ A+ E M K + W +L++G +H N
Sbjct: 346 SQIRFDVALGNS----LIDMYAKSGEIEDAVLAFEEMKEKDVR-SWTSLIAGYGRHGN 398
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 264/504 (52%), Gaps = 70/504 (13%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
GK++H +++G D+ + L+ ++ KCG + A +VF+ + K + ++N M++GY
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
G+ + L L ++M + D + S V+ +G T
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG---------------------ST 151
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
++ S C V H IKC + D ++I A++D Y K + AR
Sbjct: 152 MILPRSLCRLV---------HARIIKCDVELDD------VLITALVDTYVKSGKLESART 196
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD------------------ 339
+F+++ KD NVV T+MI GY G D+ E+F+ +D
Sbjct: 197 VFETM--KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 340 -RSVK-----------PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
RSV PN T + + AC+ L + G+++HA ++++ + + + +
Sbjct: 255 KRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHI-KMGSS 313
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+D Y+K G I+ AR VFD M+ KN SWTS+I GYG +G EEA+++F M++ + P+
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN 373
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+TFL L ACSHSG+VD+G + F M ++Y + P EHYAC+VDL+GRAG L+KA +
Sbjct: 374 YVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFA 433
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESEN-DGSYTLLSNIYANARRW 566
MP +P +W ALLS C H NV+L AA++L +L ++ G+Y LSN+YA+ +W
Sbjct: 434 RAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKW 493
Query: 567 KDVTRIRSLMKHTGIKKRPGCSWV 590
+V++IR +MK I K G SW
Sbjct: 494 DNVSKIREVMKRRRISKTIGRSWT 517
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 215/416 (51%), Gaps = 27/416 (6%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
++ ++ +CG L +ARQ+FDE+ K L ++N M++ Y++ G K L L Q+M +
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPT---LSAYNYMISGYLKHGLVKELLLLVQRMSYSGE 131
Query: 93 VDIQLDAVSLVNVLPAFASMGSWW-----FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
+ D +L VL A S GS + VH ++ + D + +LVD Y K
Sbjct: 132 ---KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKS 188
Query: 148 GMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
G + A VFE M+ ++VV +M++GY + G E+A +F + + D+V ++ ++
Sbjct: 189 GKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK----DIVVYNAMV 244
Query: 208 AGYAQKG-LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
G+++ G +++++ MQ PN T S++ C+ + + G++ H +K +
Sbjct: 245 EGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGV 304
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ + ++++DMY KC I+ AR +FD + +++NV +WT+MI GY ++G
Sbjct: 305 ------YTHIKMGSSLLDMYAKCGGINDARRVFDQM--QEKNVFSWTSMIDGYGKNGNPE 356
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++LELF++M ++ ++PN T +L AC+ + G EI + R+ +
Sbjct: 357 EALELFTRM--KEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYA 414
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
C++D ++GD++ A M + ++ W +L++ +HG E A E+ K
Sbjct: 415 CIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 126/212 (59%), Gaps = 8/212 (3%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDT-KSALG 82
+ NV C ++++ Y G ++ A ++F+ +++ D+V +N+MV + +SG+T K ++
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFN---TTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
++ M + + +V+ A + + S G+QVH ++SG++ + +G+SL+D
Sbjct: 260 MYISMQR---AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG +++A +VF++MQ+K+V SW +M+ GY G E AL LF +M+E IE + V+
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KP 233
+ ++ + GL + +F MQ +S KP
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 336 LKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKS 395
LKQ+ S A I+ +L A ++G++IHA +++ + D L ++ L+ + K
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPD-LNISIKLLILHLKC 82
Query: 396 GDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
G + AR VFD + ++ +I+GY HG +E + + + M G DG T ++L
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 456 YACSHSG 462
A + G
Sbjct: 143 KASNSRG 149
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/617 (30%), Positives = 306/617 (49%), Gaps = 84/617 (13%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ----- 85
N +V +Y + G L AR +FDEM + ++ SWN+++AAYV+ + K A LF+
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVY---SWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 86 ----------------------------KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
+M DI +D ++ ++ A + + ++
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER--MQKKDVVSWNAMVTGY 175
G+Q+HG V++G F +SL+ MY+KCG E +F ++ D V+ NAM+ Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
G + AL++F + E N D +SW+T+IAGYAQ G EAL + M+ K +E
Sbjct: 204 CREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDE 260
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
+ ++L+ +S+ +L GKE H +K V + I+D+Y KC ++ A
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLK------NGSYSNKFVSSGIVDVYCKCGNMKYA 314
Query: 296 RA-------------------------------IFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+ +FDS++ K N+V WTAM GY +
Sbjct: 315 ESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEK--NLVVWTAMFLGYLNLRQ 372
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
+ LEL + + + P++ + L AC+ A + G+EIH + LR D V
Sbjct: 373 PDSVLELARAFIANETNT-PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
+D YSK G+++ A +FD+ ++ V + ++I G HG ++ + FE+M + G
Sbjct: 432 T-AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD ITF+ +L AC H G+V EG KYF M + Y + P HY CM+DL G+A RLDKA+
Sbjct: 491 KPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAI 550
Query: 505 KLIEGM-PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
+L+EG+ ++ V+ A L+ C ++N +L + KLL +E N Y ++N YA++
Sbjct: 551 ELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASS 610
Query: 564 RRWK-DVTRIRSLMKHT 579
R K D+T I ++ T
Sbjct: 611 ARSKLDITDIDTVFMLT 627
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 233/547 (42%), Gaps = 115/547 (21%)
Query: 122 HGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
H +++SG N LV++Y+K G++ EA VF+ M +++V SWNA++ Y
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQK-GLGYEALNVFRQMQSCHSKP---NEVT 237
+ A LFE +N E D+++++T+++G+A+ G EA+ +F +M ++ T
Sbjct: 71 KEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+ +++ A + + +G++ H +K + ++++I MY+KC
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKT------GNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 298 IF--------DSVA------------------------PKDRNVVTWTAMIGGYAQHGEA 325
IF DSVA P+ + ++W +I GYAQ+G
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ--------- 376
++L++ M ++ +K + + L + L +L+ G+E+HA VL+N
Sbjct: 242 EEALKMAVSM--EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 377 ---------------------YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
Y LY A+ +I YS G + A+ +FD++ KN V
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 416 WTSLITGYGMHGQGEEAVKVFEE-MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
WT++ GY Q + +++ + E PD + + +L ACS ++ G K
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG-KEIHGH 418
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLD-------------------------------KA 503
S G++ ++ VD+ + G ++ K+
Sbjct: 419 SLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKS 478
Query: 504 MKLIEGMP---MKPGQVVWVALLSGCRKHENVKLGEFAANKLLELE--SENDGSYTLLSN 558
+ E M KP ++ ++ALLS CR V GE ++E S G YT + +
Sbjct: 479 FQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMID 538
Query: 559 IYANARR 565
+Y A R
Sbjct: 539 LYGKAYR 545
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 273/555 (49%), Gaps = 95/555 (17%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAV 100
GAL +A ++FDE+ K D+ N ++ QS + + L+ EM + D
Sbjct: 60 GALKYAHKLFDEIPKP---DVSICNHVLRGSAQSMKPEKTVSLYT---EMEKRGVSPDRY 113
Query: 101 SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM 160
+ VL A + + G HG VR G + +V N+L+ +A CG + AS++F+
Sbjct: 114 TFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFD-- 171
Query: 161 QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
++ + V+WS++ +GYA++G EA+
Sbjct: 172 ---------------------------------DSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
+F +M ++V +++GC
Sbjct: 199 RLFDEMPY----KDQVAWNVMITGC----------------------------------- 219
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
KCK + AR +FD KD VVTW AMI GY G ++L +F +M +D
Sbjct: 220 ------LKCKEMDSARELFDRFTEKD--VVTWNAMISGYVNCGYPKEALGIFKEM--RDA 269
Query: 341 SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA----NCLIDTYSKSG 396
P+ TI L ACA L L +G+ +H Y+L S +YV N LID Y+K G
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
ID A VF +K ++ +W +LI G +H E ++++FEEM++ + P+ +TF+ ++
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ 516
ACSHSG VDEG KYFS M Y + P +HY CMVD+LGRAG+L++A +E M ++P
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 448
Query: 517 VVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLM 576
+VW LL C+ + NV+LG++A KLL + + G Y LLSNIYA+ +W V ++R +
Sbjct: 449 IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMF 508
Query: 577 KHTGIKKRPGCSWVQ 591
T +KK G S ++
Sbjct: 509 DDTRVKKPTGVSLIE 523
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 118/210 (56%), Gaps = 13/210 (6%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N ++T +C +D AR++FD + D+V+WN+M++ YV G K ALG+F+ EM
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEK---DVVTWNAMISGYVNCGYPKEALGIFK---EM 266
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF-----AVRSGLFEDVFVGNSLVDMYA 145
D D V+++++L A A +G GK++H + +V S ++ + N+L+DMYA
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + A +VF ++ +D+ +WN ++ G + + E ++ +FE+M+ + + V++
Sbjct: 327 KCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIG 385
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHS-KPN 234
VI + G E F M+ ++ +PN
Sbjct: 386 VILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLID-TYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
+R+ ++IHA ++ N S++ V + + S G + A +FD + + ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS-----------------HSGM 463
G + E+ V ++ EM K G+ PD TF +L ACS H +
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 464 VDEGIK----YFSCMSKEYGVI------PGEEH---YACMVDLLGRAGRLDKAMKLIEGM 510
++E +K F + G+ + H ++ M + G++D+AM+L + M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 511 PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESEND 550
P K QV W +++GC K + + +A +L + +E D
Sbjct: 205 PYK-DQVAWNVMITGCLKCKEMD----SARELFDRFTEKD 239
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 299/569 (52%), Gaps = 64/569 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L +V V ++++MY +CG L+ A Q+F + E D+VSW++M+A+Y Q+G A+
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINI---EDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+ +M+ + I+ +AV+L +VL A + + GK +H +A+++ + ++ +++
Sbjct: 388 LFR---DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG F AL FE++ + D V+
Sbjct: 445 MYAKCGR-------------------------------FSPALKAFERLPIK----DAVA 469
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++ + GY Q G +A +V++ M+ P+ T+V +L CA G + I
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K +D E V +A+I+M+TKC +++ A +FD +++ V+W M+ GY H
Sbjct: 530 K--HGFD----SECHVAHALINMFTKCDALAAAIVLFDKCGF-EKSTVSWNIMMNGYLLH 582
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G+A +++ F QM + +PNA T + A A L+ALR G +H+ +++ + S
Sbjct: 583 GQAEEAVATFRQM--KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQT- 639
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
V N L+D Y+K G I+ + F + +K VSW ++++ Y HG AV +F M++
Sbjct: 640 PVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN 699
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
L PD ++FL +L AC H+G+V+EG + F M + + + EHYACMVDLLG+AG +
Sbjct: 700 ELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGE 759
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A++++ M +K VW ALL+ R H N+ L A +L++LE N Y+
Sbjct: 760 AVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYS-------Q 812
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
RR +V + + IKK P CSW++
Sbjct: 813 DRRLGEVNNV------SRIKKVPACSWIE 835
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 255/514 (49%), Gaps = 69/514 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S+V++ A+V MY + L ARQ+FD+M+ + D+V+WN+MV+ Q+G + +AL
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMH---VKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS-LV 141
LF +M + +D VSL N++PA + + + +HG ++ G +F +S L+
Sbjct: 188 LFH---DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLI 241
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
DMY C ++ A VFE + +KD SW M+ Y+H G FE L LF+ MR ++ +
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM--- 298
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
N+V S L A VG L+ G H Y
Sbjct: 299 --------------------------------NKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
++ L D + V +++ MY+KC + +A +F ++ +DR+VV+W+AMI Y Q
Sbjct: 327 VQQGLIGD------VSVATSLMSMYSKCGELEIAEQLFINI--EDRDVVSWSAMIASYEQ 378
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G+ ++++ LF M++ +KPNA T++ L CA +AA R G+ IH Y ++ +S+
Sbjct: 379 AGQHDEAISLFRDMMRIH--IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE- 435
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
L A +I Y+K G A F+ + K+AV++ +L GY G +A V++ M+
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI-----PGEEHYA-CMVDLLG 495
G+ PD T + ML C+ G SC+ YG I E H A ++++
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARG----SCV---YGQIIKHGFDSECHVAHALINMFT 548
Query: 496 RAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKH 529
+ L A+ L + + V W +++G H
Sbjct: 549 KCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/545 (29%), Positives = 256/545 (46%), Gaps = 96/545 (17%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
+ ++ MY C L A +F+E+++ D SW +M+AAY +G + L LF M
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRK---DESSWGTMMAAYAHNGFFEEVLELFDLMR-- 292
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ D++++ V+ + L A A +G G +H +AV+ GL DV V SL+ MY+KCG +
Sbjct: 293 -NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGEL 351
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
A ++F ++ +DVVSW+AM+ Y G + A++LF M +I+
Sbjct: 352 EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK------------- 398
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
PN VTL S+L GCA V A GK HCY IK +
Sbjct: 399 ----------------------PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADI---- 432
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+ EL A+I MY KC S A F+ + KD V + A+ GY Q G+AN + +
Sbjct: 433 --ESELETATAVISMYAKCGRFSPALKAFERLPIKD--AVAFNALAQGYTQIGDANKAFD 488
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
++ M + V P++ T+ L CA + G ++ ++++ +DS+ +VA+ LI+
Sbjct: 489 VYKNM--KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC-HVAHALIN 545
Query: 391 TYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI 449
++K + A V+FD K+ VSW ++ GY +HGQ EEAV F +M+ E P+ +
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 450 TFLVMLYA----------------------CSHS-------------GMVDEGIKYFSCM 474
TF+ ++ A CS + GM++ K F +
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEI 665
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHEN 531
S +Y V + M+ G A+ L M +KP V ++++LS CR
Sbjct: 666 SNKYIV-----SWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGL 720
Query: 532 VKLGE 536
V+ G+
Sbjct: 721 VEEGK 725
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 225/497 (45%), Gaps = 59/497 (11%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N ++ Y D +R +FD + + V WNSM+ Y ++G + ALG F M E
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGV---VLWNSMIRGYTRAGLHREALGFFGYMSEE 93
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+D D S L A A + G ++H GL DV++G +LV+MY K +
Sbjct: 94 KGIDP--DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDL 151
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
A +VF++M KDVV+ W+T+++G
Sbjct: 152 VSARQVFDKMHVKDVVT-----------------------------------WNTMVSGL 176
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK--CILNY 268
AQ G AL +F M+SC + V+L +L+ + + + H IK I +
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF 236
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
+ +IDMY C + A ++F+ V KD + +W M+ YA +G +
Sbjct: 237 S----------SGLIDMYCNCADLYAAESVFEEVWRKDES--SWGTMMAAYAHNGFFEEV 284
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
LELF M D V+ N + +L A A + L G IH Y ++ DV VA L
Sbjct: 285 LELFDLMRNYD--VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV-SVATSL 341
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
+ YSK G++++A +F N++ ++ VSW+++I Y GQ +EA+ +F +M + + P+
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 449 ITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
+T +L C+ G K C + + + E ++ + + GR A+K E
Sbjct: 402 VTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 509 GMPMKPGQVVWVALLSG 525
+P+K V + AL G
Sbjct: 461 RLPIKDA-VAFNALAQG 476
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 267/509 (52%), Gaps = 20/509 (3%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
KQ+H +R+G+ E L+ + A K+F+ Q +N ++ Y
Sbjct: 5 KQLHAHCLRTGVDET----KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
++ L+ + + + +++ + A A + Q + +
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
+L++ A +GAL + +D + ++ V NA+I Y + + A +
Sbjct: 121 TTLITAYAKLGALCCARRV----------FDEMSKRDVPVWNAMITGYQRRGDMKAAMEL 170
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
FDS+ K NV +WT +I G++Q+G +++L++F M ++D+SVKPN T+ L ACA
Sbjct: 171 FDSMPRK--NVTSWTTVISGFSQNGNYSEALKMFLCM-EKDKSVKPNHITVVSVLPACAN 227
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM-KHKNAVSWT 417
L L GR + Y N + D +YV N I+ YSK G IDVA+ +F+ + +N SW
Sbjct: 228 LGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
S+I HG+ +EA+ +F +M +EG PD +TF+ +L AC H GMV +G + F M +
Sbjct: 287 SMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
+ + P EHY CM+DLLGR G+L +A LI+ MPMKP VVW LL C H NV++ E
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSW-VQGKKGT 596
A+ L +LE N G+ ++SNIYA +W V R+R LMK + K G S+ V+
Sbjct: 407 ASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDV 466
Query: 597 ATFFVGDRTHPQSERMYAILTELIQRIKV 625
F V D++HP+S +Y +L E+ +R+K+
Sbjct: 467 HKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 128/238 (53%), Gaps = 33/238 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
S+ F C ++T Y + GAL AR++FDEM K D+ WN+M+ Y + GD K+A+
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKR---DVPVWNAMITGYQRRGDMKAAME 169
Query: 83 LFQKM-------WEMV----------------------DVDIQLDAVSLVNVLPAFASMG 113
LF M W V D ++ + +++V+VLPA A++G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 114 SWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM-QKKDVVSWNAMV 172
G+++ G+A +G F++++V N+ ++MY+KCGM+ A ++FE + ++++ SWN+M+
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+ G + ALTLF QM E + D V++ ++ G+ + +F+ M+ H
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 19/167 (11%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N++VCNA + MY +CG +D A+++F+E+ +L SWNSM+ + G AL LF
Sbjct: 249 NIYVCNATIEMYSKCGMIDVAKRLFEELGNQR--NLCSWNSMIGSLATHGKHDEALTLFA 306
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK-------QVHGFAVRSGLFEDVFVGN 138
+M + + DAV+ V +L A G G+ +VH + + +
Sbjct: 307 QMLREGE---KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY------G 357
Query: 139 SLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENA 184
++D+ + G + EA + + M K D V W ++ S G E A
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 264/527 (50%), Gaps = 55/527 (10%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
WN ++ Y + + +M M + D + V+ ++ G G VHG
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRM--MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
+R G +DV VG S VD Y KC + A KVF M +++ VS
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVS---------------- 178
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
W+ ++ Y + G EA ++F M + N + +L+
Sbjct: 179 -------------------WTALVVAYVKSGELEEAKSMFDLM----PERNLGSWNALVD 215
Query: 244 GCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVA 303
G G L++ K+ +D + +++ ++ID Y K + AR +F+
Sbjct: 216 GLVKSGDLVNAKKL----------FDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALR 363
D V W+A+I GYAQ+G+ N++ ++FS+M ++ VKP+ F + + AC+++
Sbjct: 266 GVD--VRAWSALILGYAQNGQPNEAFKVFSEMCAKN--VKPDEFIMVGLMSACSQMGCFE 321
Query: 364 SGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGY 423
++ +Y+ + YV LID +K G +D A +F+ M ++ VS+ S++ G
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGM 381
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
+HG G EA+++FE+M EG++PD + F V+L C S +V+EG++YF M K+Y ++
Sbjct: 382 AIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILAS 441
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLL 543
+HY+C+V+LL R G+L +A +LI+ MP + W +LL GC H N ++ E A L
Sbjct: 442 PDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLF 501
Query: 544 ELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
ELE ++ GSY LLSNIYA RW DV +R M GI K G SW+
Sbjct: 502 ELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 124/246 (50%), Gaps = 36/246 (14%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ----- 85
NA+V + G L +A+++FDEM K D++S+ SM+ Y + GD SA LF+
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKR---DIISYTSMIDGYAKGGDMVSARDLFEEARGV 267
Query: 86 --KMW---------------------EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVH 122
+ W EM +++ D +V ++ A + MG + ++V
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 123 GFA-VRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF 181
+ R F +V +L+DM AKCG M A+K+FE M ++D+VS+ +M+ G + G
Sbjct: 328 SYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCG 387
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS---KPNEVT- 237
A+ LFE+M +E I D V+++ ++ Q L E L F M+ +S P+ +
Sbjct: 388 SEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSC 447
Query: 238 LVSLLS 243
+V+LLS
Sbjct: 448 IVNLLS 453
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 38/303 (12%)
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
S P+ ++L +L C S IH + H I+ L +QD+ L+ I +
Sbjct: 6 SHPSLLSLETLFKLCKSE---IHLNQIHARIIRKGL-----EQDQNLISIFISSSSSSSS 57
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTIS 350
S+S + ++F+ V W +I GY+ +++ + +M++ + +P+ +T
Sbjct: 58 SLSYSSSVFERVPSP--GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLA-RPDEYTFP 114
Query: 351 CSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
+ C+ +R G +H VLR +D DV+ V +D Y K D+ AR VF M
Sbjct: 115 LVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV-VGTSFVDFYGKCKDLFSARKVFGEMPE 173
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL-----LPDGITFLVMLYACSHSGMVD 465
+NAVSWT+L+ Y G+ EEA +F+ M + L L DG+ SG +
Sbjct: 174 RNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLV---------KSGDLV 224
Query: 466 EGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE---GMPMKPGQVVWVAL 522
K F M K + Y M+D + G + A L E G+ ++ W AL
Sbjct: 225 NAKKLFDEMPKRDII-----SYTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSAL 275
Query: 523 LSG 525
+ G
Sbjct: 276 ILG 278
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 284/528 (53%), Gaps = 21/528 (3%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
C +V + + NV + ++V +YG+C + AR++FDE+ VSWN +V Y++ G
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD---VSWNVIVRRYLEMG 242
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
A+ +F KM E+ +++ ++ +V+ A + + GK +H AV+ + D
Sbjct: 243 FNDEAVVMFFKMLEL---NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV 299
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
V S+ DMY KC + A +VF++ + KD+ SW + ++GY+ G+ A LF+ M E N
Sbjct: 300 VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERN 359
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
I VSW+ ++ GY EAL+ M+ + VTLV +L+ C+ + + GK
Sbjct: 360 I----VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGK 415
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+ H + + YD ++V NA++DMY KC ++ A F ++ + R+ V+W A+
Sbjct: 416 QAHGFIYR--HGYD----TNVIVANALLDMYGKCGTLQSANIWFRQMS-ELRDEVSWNAL 468
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ G A+ G + +L F M + KP+ +T++ L CA + AL G+ IH +++R+
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVE---AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKV 435
Y DV+ + ++D YSK D A VF ++ + W S+I G +G+ +E ++
Sbjct: 526 GYKIDVV-IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
F + EG+ PD +TFL +L AC G V+ G +YFS MS +Y + P EHY CM++L
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 496 RAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLL 543
+ G L + + + MP P + + C+++ KLG +AA +L+
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 257/575 (44%), Gaps = 120/575 (20%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
+F+ N + YG+CG +D AR++F+EM + D SWN+++ A Q+G + +F++
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPER---DGGSWNAVITACAQNGVSDEVFRMFRR 152
Query: 87 MWEMVDVD-IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
M + D ++ S VL + + +Q+H V+ G +V + S+VD+Y
Sbjct: 153 M----NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYG 208
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KC +M +A +VF+ + VSWN +V Y +G + A+ +F +M E N+
Sbjct: 209 KCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV--------- 259
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+P T+ S++ C+ AL GK H +K
Sbjct: 260 --------------------------RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD------------------- 306
+ D +V ++ DMY KC + AR +FD KD
Sbjct: 294 VVAD------TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTRE 347
Query: 307 ----------RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
RN+V+W AM+GGY E +++L+ + M ++ ++ + T+ L C
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI--DNVTLVWILNVC 405
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH-KNAVS 415
+ ++ ++ G++ H ++ R+ YD++V+ VAN L+D Y K G + A + F M ++ VS
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVI-VANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS-----------HSGMV 464
W +L+TG G+ E+A+ FE M+ E P T +L C+ H ++
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 465 DEGIK------------YFSCMSKEYGVIPGEEHYACMVDLL------------GRAGRL 500
+G K Y C +Y + +E A DL+ GR+ +
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE--AATRDLILWNSIIRGCCRNGRSKEV 581
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
+ L+E +KP V ++ +L C + +V+LG
Sbjct: 582 FELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
+C+ A + R++ ++++ + ++ N I+ Y K G +D AR +F+ M ++
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPI-FLLNRAIEAYGKCGCVDDARELFEEMPERDGG 128
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE--GIKYFS 472
SW ++IT +G +E ++F M ++G+ +F +L +C G++ + ++
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLH 185
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVW 519
C +YG + +VD+ G+ + A ++ + + + P V W
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSW 231
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 294/611 (48%), Gaps = 94/611 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
LN + + N +T LD A +M + +F +N++ +V +L
Sbjct: 56 LNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVF---VYNALFKGFVTCSHPIRSLE 112
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L+ +M SLV +FAS FG+ + + G V + +L+D
Sbjct: 113 LYVRMLRDSVSPSSYTYSSLVKA-SSFASR----FGESLQAHIWKFGFGFHVKIQTTLID 167
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
Y+ G + EA KVF+ M ++ D ++
Sbjct: 168 FYSATGRIREARKVFDEMPER-----------------------------------DDIA 192
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+T+++ Y + M S +S N+++ E + T
Sbjct: 193 WTTMVSAYRR----------VLDMDSANSLANQMS------------------EKNEATS 224
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
C++N Y ++ A ++F+ + KD +++WT MI GY+Q+
Sbjct: 225 NCLIN-----------------GYMGLGNLEQAESLFNQMPVKD--IISWTTMIKGYSQN 265
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+++ +F +M+++ + P+ T+S + ACA L L G+E+H Y L+N + DV
Sbjct: 266 KRYREAIAVFYKMMEE--GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV- 322
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
Y+ + L+D YSK G ++ A +VF N+ KN W S+I G HG +EA+K+F +M E
Sbjct: 323 YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME 382
Query: 443 GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDK 502
+ P+ +TF+ + AC+H+G+VDEG + + M +Y ++ EHY MV L +AG + +
Sbjct: 383 SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYE 442
Query: 503 AMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN 562
A++LI M +P V+W ALL GCR H+N+ + E A NKL+ LE N G Y LL ++YA
Sbjct: 443 ALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 502
Query: 563 ARRWKDVTRIRSLMKHTGIKKR-PGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQ 621
RW+DV IR M+ GI+K PG S ++ K F D++H S+ + +L E+
Sbjct: 503 QNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYD 562
Query: 622 RIKVLGYVPET 632
++ + GYV ET
Sbjct: 563 QMGLAGYVQET 573
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 152/360 (42%), Gaps = 82/360 (22%)
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
IK LN D C ++N I T K + +A + + ++ NV + A+ G+
Sbjct: 52 IKTSLNQD-CR-----LMNQFITACTSFKRLDLAVSTMTQM--QEPNVFVYNALFKGFVT 103
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
SLEL+ +ML+ SV P+++T S SL+ + A+ R G + A++ + + V
Sbjct: 104 CSHPIRSLELYVRMLRD--SVSPSSYTYS-SLVKASSFAS-RFGESLQAHIWKFGFGFHV 159
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS----------------------- 418
+ LID YS +G I AR VFD M ++ ++WT+
Sbjct: 160 -KIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSE 218
Query: 419 --------LITGYGMHGQGEEAVKVFEEMR------------------------------ 440
LI GY G E+A +F +M
Sbjct: 219 KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 278
Query: 441 -KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
+EG++PD +T ++ AC+H G+++ G K + + G + + +VD+ + G
Sbjct: 279 MEEGIIPDEVTMSTVISACAHLGVLEIG-KEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 337
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVK--LGEFAANKLLELESENDGSYTLLS 557
L++A+ + +P K W +++ G H + L FA +E+ES + T +S
Sbjct: 338 LERALLVFFNLP-KKNLFCWNSIIEGLAAHGFAQEALKMFAK---MEMESVKPNAVTFVS 393
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 257/462 (55%), Gaps = 13/462 (2%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK-ETHCYT 261
W+ +I G+A A + +R M S + + V L+ ++ A +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ C +N D LL ++D Y+K + A +FD + +D V +W A+I G
Sbjct: 131 LHCQINRRGLSADSLLC-TTLLDAYSKNGDLISAYKLFDEMPVRD--VASWNALIAGLVS 187
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
A++++EL+ +M + ++ + T+ +L AC+ L ++ G I + Y +D
Sbjct: 188 GNRASEAMELYKRM--ETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDN 240
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
+ V+N ID YSK G +D A VF+ K+ V+W ++ITG+ +HG+ A+++F+++
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
G+ PD +++L L AC H+G+V+ G+ F+ M+ + GV +HY C+VDLL RAGRL
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRL 359
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
+A +I M M P V+W +LL + +V++ E A+ ++ E+ NDG + LLSN+Y
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 419
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
A RWKDV R+R M+ +KK PG S+++ K F+ D++H Q +Y + E+
Sbjct: 420 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 479
Query: 621 QRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGIL 662
+I+ GYV +T LHD+ +EEK + L HSEKLA+AYG++
Sbjct: 480 FKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 195/448 (43%), Gaps = 58/448 (12%)
Query: 41 GALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDI---QL 97
G L A Q+F + K D WN+++ + S A ++ M + ++
Sbjct: 51 GDLSFAVQIFRYIPKPLTND---WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 98 DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF 157
DA++ L A A Q+H R GL D + +L+D Y+K G + A K+F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 158 ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
+ M +D V SW+ +IAG
Sbjct: 168 DEMPVRD-----------------------------------VASWNALIAGLVSGNRAS 192
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET-HCYTIKCILNYDRCDQDEL 276
EA+ ++++M++ + +EVT+V+ L C+ +G + G+ H Y+ D +
Sbjct: 193 EAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----------NDNV 241
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
+V NA IDMY+KC + A +F+ K ++VVTW MI G+A HGEA+ +LE+F ++
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGK-KSVVTWNTMITGFAVHGEAHRALEIFDKL- 299
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+D +KP+ + +L AC + G + + + ++ + C++D S++G
Sbjct: 300 -EDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG-CVVDLLSRAG 357
Query: 397 DIDVARVVFDNMKH-KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
+ A + +M + V W SL+ ++ E A E+++ G+ DG L+
Sbjct: 358 RLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSN 417
Query: 456 YACSHSGMVDEGIKYFSCMSKEYGVIPG 483
+ D G SK+ IPG
Sbjct: 418 VYAAQGRWKDVGRVRDDMESKQVKKIPG 445
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 113/206 (54%), Gaps = 13/206 (6%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+++ +C ++ Y + G L A ++FDEM + D+ SWN+++A V A+
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEM---PVRDVASWNALIAGLVSGNRASEAME 196
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV-HGFAVRSGLFEDVFVGNSLV 141
L+++M I+ V++V L A + +G G+ + HG++ ++V V N+ +
Sbjct: 197 LYKRMETE---GIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN-----DNVIVSNAAI 248
Query: 142 DMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
DMY+KCG + +A +VFE+ KK VV+WN M+TG++ G AL +F+++ + I+ D
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDD 308
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQM 226
VS+ + GL L+VF M
Sbjct: 309 VSYLAALTACRHAGLVEYGLSVFNNM 334
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 229/422 (54%), Gaps = 41/422 (9%)
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL-LSGCASVGALIHGKETH 258
++S + ++ YA +G +ALN+F QM S + P + + SL L CA+ + G H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
+++K N+ V A++DMY KC S+S AR +FD + RN V W AMI
Sbjct: 72 AHSVKS--NF----LSNPFVGCALLDMYGKCLSVSHARKLFDEI--PQRNAVVWNAMISH 123
Query: 319 YAQHGEANDSLELFSQM--LKQDRSV-----------------------------KPNAF 347
Y G+ +++EL+ M + + S KPN
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDN 407
T+ + AC+ + A R +EIH+Y RN + + + L++ Y + G I ++VFD+
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP-QLKSGLVEAYGRCGSIVYVQLVFDS 242
Query: 408 MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
M+ ++ V+W+SLI+ Y +HG E A+K F+EM + PD I FL +L ACSH+G+ DE
Sbjct: 243 MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEA 302
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCR 527
+ YF M +YG+ ++HY+C+VD+L R GR ++A K+I+ MP KP W ALL CR
Sbjct: 303 LVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR 362
Query: 528 KHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGC 587
+ ++L E AA +LL +E EN +Y LL IY + R ++ R+R MK +G+K PG
Sbjct: 363 NYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGS 422
Query: 588 SW 589
SW
Sbjct: 423 SW 424
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 23/384 (5%)
Query: 54 YKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG 113
Y S L+S +++Y G+ + AL LF +M + LDA L + A+
Sbjct: 5 YASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHS--SFALPLDAHVFSLALKSCAAAF 62
Query: 114 SWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVT 173
G VH +V+S + FVG +L+DMY KC + A K+F+ + +++ V WNAM++
Sbjct: 63 RPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMIS 122
Query: 174 GYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLG-YEALNVFRQMQSCHSK 232
Y+H G + A+ L+E M ++ + S++ +I G G Y A+ +R+M K
Sbjct: 123 HYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFK 179
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
PN +TL++L+S C+++GA KE H Y + ++ + + + +++ Y +C SI
Sbjct: 180 PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLI------EPHPQLKSGLVEAYGRCGSI 233
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+ +FDS+ +DR+VV W+++I YA HG+A +L+ F +M + V P+
Sbjct: 234 VYVQLVFDSM--EDRDVVAWSSLISAYALHGDAESALKTFQEM--ELAKVTPDDIAFLNV 289
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVAN---CLIDTYSKSGDIDVARVVFDNMK 409
L AC+ A L E Y R Q D + + CL+D S+ G + A V M
Sbjct: 290 LKACSH-AGL--ADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 410 HK-NAVSWTSLITGYGMHGQGEEA 432
K A +W +L+ +G+ E A
Sbjct: 347 EKPTAKTWGALLGACRNYGEIELA 370
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 133/253 (52%), Gaps = 37/253 (14%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SN FV A++ MYG+C ++ HAR++FDE+ + + V WN+M++ Y G K A+ L+
Sbjct: 81 SNPFVGCALLDMYGKCLSVSHARKLFDEIPQR---NAVVWNAMISHYTHCGKVKEAVELY 137
Query: 85 QKM------------------------------WEMVDVDIQLDAVSLVNVLPAFASMGS 114
+ M +M++ + + ++L+ ++ A +++G+
Sbjct: 138 EAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
+ K++H +A R+ + + + LV+ Y +CG + VF+ M+ +DVV+W+++++
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH---- 230
Y+ G E+AL F++M + D +++ V+ + GL EAL F++MQ +
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRA 317
Query: 231 SKPNEVTLVSLLS 243
SK + LV +LS
Sbjct: 318 SKDHYSCLVDVLS 330
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 293/571 (51%), Gaps = 59/571 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+ V N++++MY + R++FDEM D VS+ S++ + Q G A+ L +
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHR---DTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFA-VRSGLFEDVFVGNSLVDMY 144
+M+ + SL+ + S S + H V + E V + +LVDMY
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGS--SSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
K A VF++M+ K+ VSW AM++G +E + LF M+ EN+
Sbjct: 196 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL-------- 247
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVG---ALIHGKETHCYT 261
+PN VTL+S+L C + +L+ KE H ++
Sbjct: 248 ---------------------------RPNRVTLLSVLPACVELNYGSSLV--KEIHGFS 278
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ C DE L A + MY +C ++S++R +F++ K R+VV W++MI GYA+
Sbjct: 279 FR-----HGCHADERLTA-AFMTMYCRCGNVSLSRVLFET--SKVRDVVMWSSMISGYAE 330
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G+ ++ + L +QM K+ ++ N+ T+ + AC L +H+ +L+ + S +
Sbjct: 331 TGDCSEVMNLLNQMRKE--GIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
L + N LID Y+K G + AR VF + K+ VSW+S+I YG+HG G EA+++F+ M K
Sbjct: 389 L-LGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G D + FL +L AC+H+G+V+E F+ K Y + EHYAC ++LLGR G++D
Sbjct: 448 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKID 506
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENVKL-GEFAANKLLELESENDGSYTLLSNIY 560
A ++ MPMKP +W +LLS C H + + G+ AN+L++ E +N +Y LLS I+
Sbjct: 507 DAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH 566
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
+ + +R +M+ + K G S ++
Sbjct: 567 TESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S++ + NA++ MY +CG+L AR++F E+ + DLVSW+SM+ AY G AL +F
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEK---DLVSWSSMINAYGLHGHGSEALEIF 442
Query: 85 QKM 87
+ M
Sbjct: 443 KGM 445
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 288/536 (53%), Gaps = 30/536 (5%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D SW +V Q K + ++ +M + I + ++ +VL A M + GK
Sbjct: 337 DSFSWGCLVRFLSQHRKFKETVDVY---IDMHNSGIPPSSHAVTSVLRACGKMENMVDGK 393
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
+H A+++GL V+V LV +Y++ G + A K F+ + +K+ VSWN+++ GY G
Sbjct: 394 PIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESG 453
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
+ A +F+++ E+ D VSW+ +I+ YA+KG A ++F M
Sbjct: 454 ELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMP------------ 497
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNY-DRCDQDELLVINAIIDMYTKCKSISVARAI 298
L AS LI G +C +K Y D Q + +I YTK + A +
Sbjct: 498 --LKSPASWNILI-GGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEEL 554
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F ++ KD+ + + AMI Y Q+G+ D+L+LF+QML+++ ++P+ T+S + A ++
Sbjct: 555 FRLMSKKDK--LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 612
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
L G + +Y+ + D L ++ LID Y K GD A +F N+ K+ VS+++
Sbjct: 613 LGNTSFGTWVESYITEHGIKIDDL-LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 671
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I G G++G EA +F M ++ + P+ +TF +L A SHSG+V EG K F+ M K++
Sbjct: 672 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDH 730
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFA 538
+ P +HY MVD+LGRAGRL++A +LI+ MPM+P VW ALL H NV+ GE A
Sbjct: 731 NLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIA 790
Query: 539 ANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKK 594
+ ++LE++ G + L+ IY++ RW D +R +K KK S++ G K
Sbjct: 791 CSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKE---KKLSVGSFLAGSK 843
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 198/407 (48%), Gaps = 32/407 (7%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V+V +V +Y R G ++ A++ FD++ + + VSWNS++ Y++SG+ A +F K
Sbjct: 408 VYVQTGLVGLYSRLGYIELAKKAFDDIAEK---NTVSWNSLLHGYLESGELDEARRVFDK 464
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
+ E DAVS ++ ++A G G F+ + N L+ Y
Sbjct: 465 IPEK-------DAVSWNLIISSYAKKGD--MGNACSLFSAMP--LKSPASWNILIGGYVN 513
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
C M A F+ M +K+ VSW M++GY+ +G ++A LF M ++ D + + +
Sbjct: 514 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAM 569
Query: 207 IAGYAQKGLGYEALNVFRQM--QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
IA Y Q G +AL +F QM ++ + +P+E+TL S++S + +G G Y +
Sbjct: 570 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 629
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+ D L+ ++ID+Y K + A +F ++ KD V+++AMI G +G
Sbjct: 630 GIKIDD------LLSTSLIDLYMKGGDFAKAFKMFSNLNKKD--TVSYSAMIMGCGINGM 681
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
A ++ LF+ M+ ++ + PN T + L A + ++ G + + + + +
Sbjct: 682 ATEANSLFTAMI--EKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHY 739
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGE 430
++D ++G ++ A + +M NA W +L+ G+H E
Sbjct: 740 G-IMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE 785
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/563 (31%), Positives = 289/563 (51%), Gaps = 83/563 (14%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+ +VT Y CG + AR++FDEM K +I V M+ A ++G + +L F++M+
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV---MIGACARNGYYQESLDFFREMY 109
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+ ++LDA + ++L A ++ FGK +H ++ D F+ +SL+DMY+K G
Sbjct: 110 K---DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
+ A KVF S +G E D+V ++ +I+
Sbjct: 167 EVGNARKVF------------------SDLG-----------------EQDLVVFNAMIS 191
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
GYA EALN+ + M+ KP+ +T +L+SG ++
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISG---------------------FSH 230
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
R ++ ++ I+++ D P +VV+WT++I G + + +
Sbjct: 231 MRNEEK----VSEILELMC-----------LDGYKP---DVVSWTSIISGLVHNFQNEKA 272
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCL 388
+ F QML + PN+ TI L AC LA ++ G+EIH Y + + D +V + L
Sbjct: 273 FDAFKQMLTH--GLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE-DHGFVRSAL 329
Query: 389 IDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
+D Y K G I A ++F K V++ S+I Y HG ++AV++F++M G D
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 449 ITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
+TF +L ACSH+G+ D G F M +Y ++P EHYACMVDLLGRAG+L +A ++I+
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 509 GMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKD 568
M M+P VW ALL+ CR H N++L AA L ELE EN G+ LL+++YANA W+
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Query: 569 VTRIRSLMKHTGIKKRPGCSWVQ 591
V R++ ++K ++ G SWV+
Sbjct: 510 VVRMKKMIKKKRFRRFLGSSWVE 532
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 172/400 (43%), Gaps = 86/400 (21%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G+ +H V SG+ + LV Y +CG + +A KVF+ M K+D+ M+ +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
G ++ +L F +M ++ ++LD
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDA-----------------------------------FI 119
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+ SLL ++ GK HC +K +Y + + +++++IDMY+K + AR
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLK--FSY----ESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
+F + +D +V + AMI GYA + +A+++L L M + +KP+ T +
Sbjct: 174 VFSDLGEQD--LVVFNAMISGYANNSQADEALNLVKDM--KLLGIKPDVITWN------- 222
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWT 417
AL SG H +RN+ + CL D Y + VSWT
Sbjct: 223 ---ALISGFS-H---MRNEEKVSEILELMCL-DGYK-----------------PDVVSWT 257
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
S+I+G + Q E+A F++M GL P+ T + +L AC+ + G +
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG----- 312
Query: 478 YGVIPGEEHY----ACMVDLLGRAGRLDKAMKLIEGMPMK 513
Y V+ G E + + ++D+ G+ G + +AM L P K
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 238/455 (52%), Gaps = 47/455 (10%)
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
+ ++S+ + +A + L V R + +PN +L + + H
Sbjct: 95 LTAYSSSLPLHASSAFSFFRLMVNRSV----PRPNHFIYPLVLKSTPYLSSAFSTPLVHT 150
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKS-ISVARAIFDSVAPKDRNVVTWTAMIGG 318
+ K + ++V A++ Y S I++AR +FD ++ +RNVV+WTAM+ G
Sbjct: 151 HLFKSGFHL------YVVVQTALLHSYASSVSHITLARQLFDEMS--ERNVVSWTAMLSG 202
Query: 319 YAQHGEANDSLELFSQMLKQD------------------------------RSVKPNAFT 348
YA+ G+ ++++ LF M ++D S++PN T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 349 ISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM 408
+ C L ACA+ L+ + IHA+ R SDV +V+N L+D Y K G+++ A VF
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDV-FVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK---EGLLPDGITFLVMLYACSHSGMVD 465
K+ +W S+I + +HG+ EEA+ VFEEM K + PD ITF+ +L AC+H G+V
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 466 EGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
+G YF M+ +G+ P EHY C++DLLGRAGR D+A++++ M MK + +W +LL+
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 526 CRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRP 585
C+ H ++ L E A L+ L N G +++N+Y W++ R R ++KH K P
Sbjct: 442 CKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPP 501
Query: 586 GCSWVQGKKGTATFFVGDRTHPQSERMYAILTELI 620
G S ++ F+ D++HP++E +Y IL LI
Sbjct: 502 GWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 175/338 (51%), Gaps = 21/338 (6%)
Query: 105 VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK-CGMMHEASKVFERMQKK 163
VL + + S + VH +SG V V +L+ YA + A ++F+ M ++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
+VVSW AM++GY+ G NA+ LFE M E DV SW+ ++A Q GL EA+++F
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLEAVSLF 247
Query: 224 RQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
R+M + S +PNEVT+V +LS CA G L K H + Y R ++ V N++
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA------YRRDLSSDVFVSNSL 301
Query: 283 IDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD-RS 341
+D+Y KC ++ A ++F + K ++ W +MI +A HG + +++ +F +M+K +
Sbjct: 302 VDLYGKCGNLEEASSVFKMASKK--SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLIDTYSKSGDIDV 400
+KP+ T L AC + GR + ++ N++ + + CLID ++G D
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 401 ARVVFDNMKHK-NAVSWTSLITGYGMHGQ---GEEAVK 434
A V MK K + W SL+ +HG E AVK
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK 456
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 37/230 (16%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
NV A+++ Y R G + +A +F++M + D+ SWN+++AA Q+G A+ LF+
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPER---DVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + + I+ + V++V VL A A G+ K +H FA R L DVFV NSLVD+Y
Sbjct: 249 RM--INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + EAS VF+ KK + +WN+M+ ++ G E A+ +FE+M + NI D+
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN-DI----- 360
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
KP+ +T + LL+ C G + G+
Sbjct: 361 --------------------------KPDHITFIGLLNACTHGGLVSKGR 384
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG--EANDSLELFSQMLKQDRSV-KPNAF 347
++S AR IFD + + ++ + A++ Y+ A+ + F M+ +RSV +PN F
Sbjct: 72 NLSYARFIFDRFSFPNTHL--YAAVLTAYSSSLPLHASSAFSFFRLMV--NRSVPRPNHF 127
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKS-GDIDVARVVFD 406
L + L++ S +H ++ ++ + V+ V L+ +Y+ S I +AR +FD
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVV-VQTALLHSYASSVSHITLARQLFD 186
Query: 407 NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
M +N VSWT++++GY G AV +FE+M + D ++ +L AC+ +G+ E
Sbjct: 187 EMSERNVVSWTAMLSGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLE 242
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ F M E + P E C++ + G L A
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S+VFV N++V +YG+CG L+ A +F K L +WNSM+ + G ++ A+
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK---SLTAWNSMINCFALHGRSEEAIA 347
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
+F++M ++ DI+ D ++ + +L A S G +F + F G+ +
Sbjct: 348 VFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF----GIEPRIEHY 403
Query: 138 NSLVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTG---YSHIGMFENAL 185
L+D+ + G EA +V M+ K D W +++ + H+ + E A+
Sbjct: 404 GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAV 455
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 229/411 (55%), Gaps = 14/411 (3%)
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
+Q LG + + + P+ +T L+ C GK+ HC+ +K +
Sbjct: 92 SQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK-----NG 146
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
+ V ++ +Y + K + AR +FD + D VV W ++ GY + G ++ LE
Sbjct: 147 VFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPD--VVKWDVLMNGYVRCGLGSEGLE 204
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLID 390
+F +ML R ++P+ F+++ +L ACA++ AL G+ IH +V + ++ ++V L+D
Sbjct: 205 VFKEMLV--RGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVD 262
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGI 449
Y+K G I+ A VF+ + +N SW +LI GY +G ++A + + R++G+ PD +
Sbjct: 263 MYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSV 322
Query: 450 TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
L +L AC+H G ++EG M YG+ P EHY+C+VDL+ RAGRLD A+ LIE
Sbjct: 323 VLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEK 382
Query: 510 MPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELE----SENDGSYTLLSNIYANARR 565
MPMKP VW ALL+GCR H+NV+LGE A LL+LE E + + LSNIY + +R
Sbjct: 383 MPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQR 442
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
+ ++R +++ GI+K PG S ++ F GD +HP +++ ++
Sbjct: 443 NPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 55/428 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALD----HARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTK 78
L+ N + + ++T + L+ +A +FD + EI + +++M+ +S
Sbjct: 39 LHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI---EIPNSFVYDTMIRICSRSSQPH 95
Query: 79 SALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF-EDVFVG 137
L F M + + DI ++ ++ A + GKQ+H + V++G+F D V
Sbjct: 96 LGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQ 155
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
++ +Y + ++ +A KVF+ + + DVV
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVK------------------------------ 185
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
W ++ GY + GLG E L VF++M +P+E ++ + L+ CA VGAL GK
Sbjct: 186 -----WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWI 240
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
H + K R + ++ V A++DMY KC I A +F+ + RNV +W A+IG
Sbjct: 241 HEFVKK-----KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT--RRNVFSWAALIG 293
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
GYA +G A + ++ ++D +KP++ + L ACA L GR + +
Sbjct: 294 GYAAYGYAKKATTCLDRIERED-GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYGMHGQ---GEEAV 433
+ +C++D ++G +D A + + M K S W +L+ G H GE AV
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAV 412
Query: 434 KVFEEMRK 441
+ ++ K
Sbjct: 413 QNLLDLEK 420
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 18/233 (7%)
Query: 3 RASFLSPWQFCSCCCLV*WVLNSNVFVCNA-----VVTMYGRCGALDHARQMFDEMYKSE 57
+A F S + C WV+ + VF+ + V+ +Y L AR++FDE+ +
Sbjct: 128 KACFFSVGKQIHC-----WVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP- 181
Query: 58 IFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
D+V W+ ++ YV+ G L +F+ EM+ I+ D S+ L A A +G+
Sbjct: 182 --DVVKWDVLMNGYVRCGLGSEGLEVFK---EMLVRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 118 GKQVHGFAVRSGLFE-DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
GK +H F + E DVFVG +LVDMYAKCG + A +VFE++ +++V SW A++ GY+
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 177 HIGMFENALTLFEQM-REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
G + A T +++ RE+ I+ D V V+A A G E + M++
Sbjct: 297 AYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ S+VFV A+V MY +CG ++ A ++F+++ + +F SW +++ Y G K A
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVF---SWAALIGGYAAYGYAKKATT 306
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ-VHGFAVRSGLFEDVFVGNSLV 141
++ E D I+ D+V L+ VL A A G G+ + R G+ + +V
Sbjct: 307 CLDRI-ERED-GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIV 364
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVS-WNAMVTG---YSHIGMFENALTLFEQMREENIE 197
D+ + G + +A + E+M K + S W A++ G + ++ + E A+ + + N+E
Sbjct: 365 DLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVE 424
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 260/524 (49%), Gaps = 56/524 (10%)
Query: 48 QMFDEMYKSEIFDLVS------WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVS 101
+ D Y S IF+ VS +N+M+ Y S + + A +F ++ + LD S
Sbjct: 71 SVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK---GLTLDRFS 127
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
+ L + + G+ +HG A+RSG + N+L+ Y CG + +A KVF+ M
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMP 187
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
+ +D V++ST++ GY Q AL+
Sbjct: 188 QS----------------------------------VDAVTFSTLMNGYLQVSKKALALD 213
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
+FR M+ N TL+S LS + +G L + H IK L+ D L +I A
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD------LHLITA 267
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
+I MY K IS AR IFD KD VVTW MI YA+ G + + L QM +
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKD--VVTWNCMIDQYAKTGLLEECVWLLRQM--KYEK 323
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA 401
+KPN+ T L +CA A GR + + + D + + L+D Y+K G ++ A
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI-LGTALVDMYAKVGLLEKA 382
Query: 402 RVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG--LLPDGITFLVMLYACS 459
+F+ MK K+ SWT++I+GYG HG EAV +F +M +E + P+ ITFLV+L ACS
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 460 HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVW 519
H G+V EGI+ F M + Y P EHY C+VDLLGRAG+L++A +LI +P+ W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 520 VALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANA 563
ALL+ CR + N LGE +L E+ + LL+ +A A
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 199/418 (47%), Gaps = 62/418 (14%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
NA++ Y CG + AR++FDEM +S D V++++++ Y+Q AL LF+ M +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQS--VDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
++ ++ +L++ L A + +G + H ++ GL D+ + +L+ MY K G +
Sbjct: 222 ---EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGI 278
Query: 151 HEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGY 210
A ++F+ +KDVV+WN M+ Y+ G+ E + L QM+ E +
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKM-------------- 324
Query: 211 AQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR 270
KPN T V LLS CA A G+ T+ +L +R
Sbjct: 325 ---------------------KPNSSTFVGLLSSCAYSEAAFVGR-----TVADLLEEER 358
Query: 271 CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLE 330
D +L A++DMY K + A IF+ + KD++V +WTAMI GY HG A +++
Sbjct: 359 IALDAILG-TALVDMYAKVGLLEKAVEIFNRM--KDKDVKSWTAMISGYGAHGLAREAVT 415
Query: 331 LFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG-----REIHAYVLRNQYDSDVLYVA 385
LF++M +++ V+PN T L AC+ + G R + AY + +
Sbjct: 416 LFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEH-----Y 470
Query: 386 NCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITG---YGMHGQGEEAVKVFEEM 439
C++D ++G ++ A + N+ ++ +W +L+ YG GE + EM
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEM 528
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 120/212 (56%), Gaps = 10/212 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ ++ + A++ MYG+ G + AR++FD + D+V+WN M+ Y ++G + +
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRK---DVVTWNCMIDQYAKTGLLEECVW 314
Query: 83 LFQKM-WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L ++M +E ++ ++ + V +L + A + + G+ V + D +G +LV
Sbjct: 315 LLRQMKYE----KMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALV 370
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN--IELD 199
DMYAK G++ +A ++F RM+ KDV SW AM++GY G+ A+TLF +M EEN + +
Sbjct: 371 DMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPN 430
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
+++ V+ + GL E + F++M +S
Sbjct: 431 EITFLVVLNACSHGGLVMEGIRCFKRMVEAYS 462
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 190/436 (43%), Gaps = 63/436 (14%)
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
++HG+ V++GL +D F + L+ +S +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLL--------------------------------AFSSVL 73
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
A ++FE + N+ + ++T+I GY+ A +VF Q+++ + + +
Sbjct: 74 DIRYASSIFEHVSNTNLFM----FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFI 129
Query: 240 SLLSGCA-----SVGALIHGKETHC-YTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
+ L C+ S+G +HG + + L NA+I Y C IS
Sbjct: 130 TTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR------------NALIHFYCVCGKIS 177
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
AR +FD + P+ + VT++ ++ GY Q + +L+LF M K + V N T+ L
Sbjct: 178 DARKVFDEM-PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE--VVVNVSTLLSFL 234
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNA 413
A + L L H ++ D D L++ LI Y K+G I AR +FD K+
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLD-LHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 414 VSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSC 473
V+W +I Y G EE V + +M+ E + P+ TF+ +L +C++S G
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL 353
Query: 474 MSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVK 533
+ +E + A +VD+ + G L+KA+++ M K + W A++SG H
Sbjct: 354 LEEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMKDKDVK-SWTAMISGYGAH---G 408
Query: 534 LGEFAANKLLELESEN 549
L A ++E EN
Sbjct: 409 LAREAVTLFNKMEEEN 424
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 221/389 (56%), Gaps = 14/389 (3%)
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P+ +T L+ C GK+ HC+ +K + + V ++ +Y + K +
Sbjct: 11 PSYLTFHFLIVACLKACFFSVGKQIHCWVVK-----NGVFLSDSHVQTGVLRIYVEDKLL 65
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
AR +FD + D VV W ++ GY + G ++ LE+F +ML + ++P+ F+++ +
Sbjct: 66 LDARKVFDEIPQPD--VVKWDVLMNGYVRCGLGSEGLEVFREMLV--KGLEPDEFSVTTA 121
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L ACA++ AL G+ IH +V + + ++V L+D Y+K G I+ A VF + +N
Sbjct: 122 LTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRN 181
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGITFLVMLYACSHSGMVDEGIKYF 471
SW +LI GY +G ++A+ E + R++G+ PD + L +L AC+H G ++EG
Sbjct: 182 VFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSML 241
Query: 472 SCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
M Y + P EHY+C+VDL+ RAGRLD A+ LIE MPMKP VW ALL+GCR H+N
Sbjct: 242 ENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKN 301
Query: 532 VKLGEFAANKLLELE----SENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGC 587
V+LGE A LL+LE E + + LSNIY + +R + +++R +++ G++K PG
Sbjct: 302 VELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGW 361
Query: 588 SWVQGKKGTATFFVGDRTHPQSERMYAIL 616
S ++ F GD +HP +++ ++
Sbjct: 362 SVLEVDGNVTKFVSGDVSHPNLLQIHTVI 390
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 48/329 (14%)
Query: 118 GKQVHGFAVRSGLF-EDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
GKQ+H + V++G+F D V ++ +Y + ++ +A KVF+ + + DVV
Sbjct: 32 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK--------- 82
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
W ++ GY + GLG E L VFR+M +P+E
Sbjct: 83 --------------------------WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEF 116
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
++ + L+ CA VGAL GK H + K + ++ V A++DMY KC I A
Sbjct: 117 SVTTALTACAQVGALAQGKWIHEFVKK-----KSWIESDVFVGTALVDMYAKCGCIETAV 171
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+F + RNV +W A+IGGYA +G A ++ ++ ++D +KP++ + L AC
Sbjct: 172 EVFKKLT--RRNVFSWAALIGGYAAYGYAKKAMTCLERLERED-GIKPDSVVLLGVLAAC 228
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS- 415
A L GR + + + +C++D ++G +D A + + M K S
Sbjct: 229 AHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 288
Query: 416 WTSLITGYGMHGQ---GEEAVKVFEEMRK 441
W +L+ G H GE AVK ++ K
Sbjct: 289 WGALLNGCRTHKNVELGELAVKNLLDLEK 317
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 3 RASFLSPWQFCSCCCLV*WVLNSNVFVCNA-----VVTMYGRCGALDHARQMFDEMYKSE 57
+A F S + C WV+ + VF+ ++ V+ +Y L AR++FDE+ +
Sbjct: 25 KACFFSVGKQIHC-----WVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP- 78
Query: 58 IFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
D+V W+ ++ YV+ G L +F+ EM+ ++ D S+ L A A +G+
Sbjct: 79 --DVVKWDVLMNGYVRCGLGSEGLEVFR---EMLVKGLEPDEFSVTTALTACAQVGALAQ 133
Query: 118 GKQVHGFAVRSGLFE-DVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
GK +H F + E DVFVG +LVDMYAKCG + A +VF+++ +++V SW A++ GY+
Sbjct: 134 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 193
Query: 177 HIGMFENALTLFEQM-REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
G + A+T E++ RE+ I+ D V V+A A G E ++ M++
Sbjct: 194 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 246
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
+++ + P+ T ++AC + G++IH +V++N +V ++ Y +
Sbjct: 4 EEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDK 63
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
+ AR VFD + + V W L+ GY G G E ++VF EM +GL PD + L
Sbjct: 64 LLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALT 123
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYA-CMVDLLGRAGRLDKAMKLIEGMPMKPG 515
AC+ G + +G K+ K+ I + +VD+ + G ++ A+++ + + +
Sbjct: 124 ACAQVGALAQG-KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR-N 181
Query: 516 QVVWVALLSG 525
W AL+ G
Sbjct: 182 VFSWAALIGG 191
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ S+VFV A+V MY +CG ++ A ++F ++ + +F SW +++ Y G K A+
Sbjct: 147 IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVF---SWAALIGGYAAYGYAKKAMT 203
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ-VHGFAVRSGLFEDVFVGNSLV 141
+++ E D I+ D+V L+ VL A A G G+ + R + + +V
Sbjct: 204 CLERL-ERED-GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIV 261
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVS-WNAMVTG---YSHIGMFENALTLFEQMREENIE 197
D+ + G + +A + E+M K + S W A++ G + ++ + E A+ + + N+E
Sbjct: 262 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVE 321
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 223/410 (54%), Gaps = 16/410 (3%)
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGY--AQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
AL++ Q+ ++ L S++++ + Q L + + +S +PNE T SL
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 242 LSGCA-SVGALIHGKETHCYTIKCI--LNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
HG+ H + +K + +N+DR V A++ Y C + AR++
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDR------FVQAALVGFYANCGKLREARSL 172
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F+ + ++ ++ TW ++ YA E + E+ +L V+PN ++ + +CA
Sbjct: 173 FERI--REPDLATWNTLLAAYANSEEIDSDEEVL--LLFMRMQVRPNELSLVALIKSCAN 228
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTS 418
L G H YVL+N + +V LID YSK G + AR VFD M ++ + +
Sbjct: 229 LGEFVRGVWAHVYVLKNNLTLNQ-FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I G +HG G+E +++++ + +GL+PD TF+V + ACSHSG+VDEG++ F+ M Y
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFA 538
G+ P EHY C+VDLLGR+GRL++A + I+ MP+KP +W + L + H + + GE A
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 539 ANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
LL LE EN G+Y LLSNIYA RW DV + R LMK + K PG S
Sbjct: 408 LKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 117/211 (55%), Gaps = 12/211 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKS--- 79
+N + FV A+V Y CG L AR +F+ + + DL +WN+++AAY S + S
Sbjct: 146 VNHDRFVQAALVGFYANCGKLREARSLFERIREP---DLATWNTLLAAYANSEEIDSDEE 202
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
L LF +M ++ + +SLV ++ + A++G + G H + +++ L + FVG S
Sbjct: 203 VLLLFMRM------QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTS 256
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+D+Y+KCG + A KVF+ M ++DV +NAM+ G + G + + L++ + + + D
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
++ I+ + GL E L +F M++ +
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 169/563 (30%), Positives = 285/563 (50%), Gaps = 57/563 (10%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
N +++ Y + G +D A +F M + + VSWN +++ +V G ++ + + M
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNV---VSWNCLISGFVDKGSPRA----LEFLVRM 229
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
+ LD +L L A + G GKQ+H V+SGL F ++L+DMY+ CG +
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 151 HEASKVFERMQ---KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
A+ VF + + V WN+M++G+ E AL L Q+ + ++ D S +
Sbjct: 290 IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFD----SYTL 345
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
+G + + Y L + Q+ S ++ G E L+
Sbjct: 346 SGALKICINYVNLRLGLQVHSL--------------------VVVSGYE---------LD 376
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
Y +V + ++D++ +I A +F + KD ++ ++ +I G + G +
Sbjct: 377 Y--------IVGSILVDLHANVGNIQDAHKLFHRLPNKD--IIAFSGLIRGCVKSGFNSL 426
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
+ LF +++K + + F +S L C+ LA+L G++IH ++ Y+S+ + A
Sbjct: 427 AFYLFRELIK--LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV-TATA 483
Query: 388 LIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
L+D Y K G+ID V+FD M ++ VSWT +I G+G +G+ EEA + F +M G+ P+
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 448 GITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLI 507
+TFL +L AC HSG+++E M EYG+ P EHY C+VDLLG+AG +A +LI
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 508 EGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWK 567
MP++P + +W +LL+ C H+N L A KLL+ ++ YT LSN YA W
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWD 663
Query: 568 DVTRIRSLMKHTGIKKRPGCSWV 590
++++R K G K G SW+
Sbjct: 664 QLSKVREAAKKLG-AKESGMSWI 685
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 253/516 (49%), Gaps = 30/516 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
++ NVF+ N V++MY L A ++FDEM + I V+W +MV+ Y G A+
Sbjct: 36 ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI---VTWTTMVSGYTSDGKPNKAIE 92
Query: 83 LFQKMWEMVDVDIQLDAVS---LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
L+++M +D + +A + VL A +G G V+ + L DV + NS
Sbjct: 93 LYRRM-----LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNS 147
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
+VDMY K G + EA+ F+ + + SWN +++GY G+ + A+TLF +M + N
Sbjct: 148 VVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN---- 203
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
VVSW+ +I+G+ KG AL +MQ + L L C+ G L GK+ HC
Sbjct: 204 VVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF-DSVAPKDRNVVTWTAMIGG 318
+K L + I+A+IDMY+ C S+ A +F + +V W +M+ G
Sbjct: 263 CVVKSGL------ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
+ + E +L L Q+ + D +++T+S +L C LR G ++H+ V+ + Y+
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCF--DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
D + V + L+D ++ G+I A +F + +K+ ++++ LI G G A +F E
Sbjct: 375 LDYI-VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS-CMSKEYGVIPGEEHYACMVDLLGRA 497
+ K GL D +L CS + G + C+ K Y P +VD+ +
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKC 491
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVK 533
G +D + L +GM ++ V W ++ G ++ V+
Sbjct: 492 GEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVE 526
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 211/454 (46%), Gaps = 54/454 (11%)
Query: 16 CCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSG 75
CC+V L S+ F +A++ MY CG+L +A +F + + + WNSM++ ++ +
Sbjct: 262 CCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINE 321
Query: 76 DTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVF 135
+ ++AL L ++++ D+ D+ +L L + + G QVH V SG D
Sbjct: 322 ENEAALWLLLQIYQS---DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
VG+ LVD++A G + +A K+F R+ KD+++++ ++ G G A LF ++ +
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK-- 436
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
LG +A ++ + ++L C+S+ +L GK
Sbjct: 437 -------------------LGLDA--------------DQFIVSNILKVCSSLASLGWGK 463
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+ H IK + + E + A++DMY KC I +FD + +R+VV+WT +
Sbjct: 464 QIHGLCIK------KGYESEPVTATALVDMYVKCGEIDNGVVLFDGML--ERDVVSWTGI 515
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I G+ Q+G ++ F +M+ + ++PN T L AC L R +++
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMI--NIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKS 572
Query: 376 QYDSDVLYVAN--CLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITGYGMHGQGEEA 432
+Y + Y+ + C++D ++G A + + M + WTSL+T G H +
Sbjct: 573 EYGLEP-YLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH-KNAGL 630
Query: 433 VKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
V V E +G D + + A + GM D+
Sbjct: 631 VTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/652 (29%), Positives = 303/652 (46%), Gaps = 82/652 (12%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSALGLFQKM 87
+C A TM A +F+EM + V ++NSM+ + + G+ L +M
Sbjct: 624 LCKACRTM--------EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFG-KQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
+E + SL++ L A F ++ G + + +L+ K
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG----KDCYPNRITFMALIQGLCK 731
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMV--------------TGYS------HIGMFENALT 186
CG EA F M++K++ +A+ G+ H G F ++
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 187 LFEQMREENIELDV---------------VSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
M N+ DV W+ VI G++ ++++V+ QM
Sbjct: 792 R-NYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGL 850
Query: 232 KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN------------------------ 267
P+ +T L+ + + G HC +K L
Sbjct: 851 LPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARK 910
Query: 268 -YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+D L+ N+I+D Y K + AR +FD ++ +R+VVTW++MI GY + GE N
Sbjct: 911 LFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS--ERDVVTWSSMIDGYVKRGEYN 968
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
+LE+F QM++ S K N T+ + ACA L AL G+ +H Y+L V+ +
Sbjct: 969 KALEIFDQMMRMGSS-KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVI-LQT 1026
Query: 387 CLIDTYSKSGDIDVARVVF--DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
LID Y+K G I A VF ++K +A+ W ++I G HG E++++F +MR+ +
Sbjct: 1027 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 1086
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD ITFL +L ACSH G+V E +F + KE G P EHYACMVD+L RAG + A
Sbjct: 1087 DPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAH 1145
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANAR 564
I MP+KP + ALL+GC H N++L E KL+EL+ NDG Y L+N+YA +
Sbjct: 1146 DFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINK 1205
Query: 565 RWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAIL 616
+++ +R M+ G+KK G S + F D+TH S+++YA+L
Sbjct: 1206 QFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 1257
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 122/212 (57%), Gaps = 7/212 (3%)
Query: 24 NSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+ N+ N+++ Y + G + AR +FDEM + D+V+W+SM+ YV+ G+ AL +
Sbjct: 917 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSER---DVVTWSSMIDGYVKRGEYNKALEI 973
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F +M M + + V++V+V+ A A +G+ GK VH + + L V + SL+DM
Sbjct: 974 FDQMMRMGSS--KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDM 1031
Query: 144 YAKCGMMHEASKVFER--MQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
YAKCG + +A VF R +++ D + WNA++ G + G +L LF +MRE I+ D +
Sbjct: 1032 YAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 1091
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
++ ++A + GL EA + F+ ++ ++P
Sbjct: 1092 TFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 1123
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 179/412 (43%), Gaps = 85/412 (20%)
Query: 128 SGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFEN 183
+G DV + L+ K EA +F M K V ++N+M+ G+ G +
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
L+ +M E+ DV++++++I G G EA+ + +M+ PN +T ++L+
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 244 GCASVG----ALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
G G AL++ +E ++ + + V +++ + ++I+ IF
Sbjct: 728 GLCKCGWSGEALVYFREME----------EKEMEPDSAVYLSLVSSFLSSENINAGFGIF 777
Query: 300 DSVAPK-------DRNVVT-------------------------WTAMIGGYAQHGEAND 327
+ K DRN + W +I G++
Sbjct: 778 REMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEK 837
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANC 387
S+ ++ QML+ + P+ T + + +RL+ + G +H V+++ + D L++ N
Sbjct: 838 SISVYIQMLR--FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWD-LFICNT 894
Query: 388 LI-------------------------------DTYSKSGDIDVARVVFDNMKHKNAVSW 416
LI D Y+KSGD+ AR+VFD M ++ V+W
Sbjct: 895 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 954
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEG-LLPDGITFLVMLYACSHSGMVDEG 467
+S+I GY G+ +A+++F++M + G + +T + ++ AC+H G ++ G
Sbjct: 955 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 1006
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 117/592 (19%), Positives = 236/592 (39%), Gaps = 81/592 (13%)
Query: 4 ASFLS-PWQFCSCCCLV*WVLNSNVFVCNAVVTMYGRC----GALDHARQMFDEMYKSE- 57
AS LS Q S LV VLNS F+ + RC G +D A +FD + +
Sbjct: 113 ASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGL 172
Query: 58 -IFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWW 116
+ + ++N ++ A +S + L + ++ EM D D +L VL + + G
Sbjct: 173 CVPNAYTYNCLLEAISKSNSSSVEL-VEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 117 FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDV----VSWNAMV 172
V + G D + LV + K G + +A ++ E ++++D+ ++ ++
Sbjct: 232 RALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
G+ + A LFE+MR + D+ + +I G + AL+++ +++
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 233 PNEVTLVSLL------SGCASVGALIHGK------------------------ETHCYTI 262
P+ L LL S + + +I G E + +
Sbjct: 351 PDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQ 410
Query: 263 KCILNYDRCDQDELL---------------VINAIIDMYTKCKSISVARAIFDSVAPKD- 306
+ NY+ E++ ++ +I+ K + +A + +
Sbjct: 411 NLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGL 470
Query: 307 -RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC--SLMA--CARLAA 361
+ + +I G + G + +SL+L +M +D V+P+ FT++C +A C + A
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEM--KDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWT 417
L +++ Y L+ ++G A D++ + + V+ T
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTF-----LVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA-CSHSGMVDEGIKYFSCMSK 476
+ I G + + +++F ++ G PD I + V++ A C ++ I + +SK
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 477 EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSG 525
G+ P Y M+D + G +D+ + I M P + + +L+ G
Sbjct: 644 --GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 33/309 (10%)
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS--- 240
A+TL + + + + ++ +I G ++G E+L + +M+ +P++ TL
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 241 -LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
L C VGAL K+ Y + + + +L +D CK +
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVD---ACKYL------- 567
Query: 300 DSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
D VA + ++V TA I G ++ + LELF + A+ +
Sbjct: 568 DDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK----- 622
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVA----NCLIDTYSKSGDID-----VARVVFDNM 408
A ++ R + A +L N+ S L N +ID + K G+ID + R+ +++
Sbjct: 623 --ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM-YEDE 679
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
K+ + +++TSLI G G+ EA+ + EM+ + P+ ITF+ ++ G E +
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 469 KYFSCMSKE 477
YF M ++
Sbjct: 740 VYFREMEEK 748
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 158/391 (40%), Gaps = 56/391 (14%)
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
+V+ A + G + L LF + DV+++ +I + EA +F
Sbjct: 579 MVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFN 638
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN-YDRCDQDELLVINAII 283
+M S KP T S++ G G + G + CI+ Y+ +++ ++I
Sbjct: 639 EMVSKGLKPTVATYNSMIDGWCKEGEIDRG-------LSCIVRMYEDEKNPDVITYTSLI 691
Query: 284 DMYTKCKSISVARAIF--DSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
+ C S + AIF + + KD N +T+ A+I G + G + ++L F +M ++
Sbjct: 692 --HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM--EE 747
Query: 340 RSVKPNAFTISCSLMACARLAALRSG----RE-IHAYVLRNQYDSDVLYVANCLIDTYSK 394
+ ++P++ + + + +G RE +H D + + N
Sbjct: 748 KEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNV------- 800
Query: 395 SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
+ D+D A + W +I G+ E+++ V+ +M + GLLPD +T+ +
Sbjct: 801 TSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFL 860
Query: 455 LYACS-----------HSGMVDEGIKY--FSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
+ + S H +V G+++ F C + ++ + G
Sbjct: 861 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNT--------------LIHMYGSFRDQA 906
Query: 502 KAMKLIEGMPMKPGQVVWVALLSGCRKHENV 532
A KL + MP K V W ++L K +V
Sbjct: 907 SARKLFDEMPHK-NLVTWNSILDAYAKSGDV 936
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 262/519 (50%), Gaps = 87/519 (16%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
NS++ AY S + AL +F+ EM+ + D S VL A A+ + G+Q+HG
Sbjct: 109 NSVIRAYANSSTPEVALTVFR---EMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
++SGL DVFV N+LV++Y + G FE A
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRS-------------------------------GYFEIA 194
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
+ ++M D VSW+++++ Y +KGL EA +F +M+ + N + ++SG
Sbjct: 195 RKVLDRMPVR----DAVSWNSLLSAYLEKGLVDEARALFDEME----ERNVESWNFMISG 246
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
A+ G + A+ +FDS+
Sbjct: 247 YAAAGL-----------------------------------------VKEAKEVFDSMPV 265
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
+D VV+W AM+ YA G N+ LE+F++ML D + KP+ FT+ L ACA L +L
Sbjct: 266 RD--VVSWNAMVTAYAHVGCYNEVLEVFNKML-DDSTEKPDGFTLVSVLSACASLGSLSQ 322
Query: 365 GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYG 424
G +H Y+ ++ + + ++A L+D YSK G ID A VF ++ +W S+I+
Sbjct: 323 GEWVHVYIDKHGIEIEG-FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLS 381
Query: 425 MHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE 484
+HG G++A+++F EM EG P+GITF+ +L AC+H GM+D+ K F MS Y V P
Sbjct: 382 VHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTI 441
Query: 485 EHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLE 544
EHY CMVDLLGR G++++A +L+ +P ++ +LL C++ ++ E AN+LLE
Sbjct: 442 EHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLE 501
Query: 545 LESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKK 583
L + Y +SN+YA+ RW+ V R M+ + +
Sbjct: 502 LNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 188/414 (45%), Gaps = 90/414 (21%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++VFV N +V +YGR G + AR++ D M + D VSWNS+++AY++ G A
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRM---PVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF +M E ++ SW N ++
Sbjct: 228 LFDEMEER--------------------NVESW----------------------NFMIS 245
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YA G++ EA +VF+ M +DVVSWNAMVT Y+H+G + L +F +M +++ E
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE----- 300
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
KP+ TLVS+LS CAS+G+L G+ H Y
Sbjct: 301 -----------------------------KPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + + E + A++DMY+KC I A +F + + +D V TW ++I + H
Sbjct: 332 KHGI------EIEGFLATALVDMYSKCGKIDKALEVFRATSKRD--VSTWNSIISDLSVH 383
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G D+LE+FS+M+ + KPN T L AC + L R++ + +
Sbjct: 384 GLGKDALEIFSEMVYE--GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTI 441
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNA-VSWTSLITGYGMHGQGEEAVKV 435
C++D + G I+ A + + + A + SL+ GQ E+A ++
Sbjct: 442 EHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVAN--CLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
R +L ++ HA++L+ D + T + + A + + + N +
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
S+I Y E A+ VF EM + PD +F +L AC+ +EG +
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
K G++ +V++ GR+G + A K+++ MP++ V W +LLS + L
Sbjct: 168 KS-GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA-VSWNSLLSAYLEK---GLV 222
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRI 572
+ A E+E N S+ + + YA A K+ +
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEV 259
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 217/390 (55%), Gaps = 15/390 (3%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ ++ Y + +A+ V+ M P+ +L ++ + GKE H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 263 KCILNYDR-CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+ D C+ + I +Y K AR +FD +R + +W A+IGG
Sbjct: 145 RLGFVGDEFCE-------SGFITLYCKAGEFENARKVFDE--NPERKLGSWNAIIGGLNH 195
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL--RNQYDS 379
G AN+++E+F M + ++P+ FT+ +C L L ++H VL + + S
Sbjct: 196 AGRANEAVEMFVDMKRS--GLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKS 253
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
D++ + N LID Y K G +D+A +F+ M+ +N VSW+S+I GY +G EA++ F +M
Sbjct: 254 DIMML-NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
R+ G+ P+ ITF+ +L AC H G+V+EG YF+ M E+ + PG HY C+VDLL R G+
Sbjct: 313 REFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 500 LDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI 559
L +A K++E MPMKP +VW L+ GC K +V++ E+ A ++ELE NDG Y +L+N+
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANV 432
Query: 560 YANARRWKDVTRIRSLMKHTGIKKRPGCSW 589
YA WKDV R+R LMK + K P S+
Sbjct: 433 YALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 194/406 (47%), Gaps = 53/406 (13%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVS----WNSMVAAYVQSGDTKSALGLFQKMW 88
+ T+ C +L R++ ++++S I D WN+++ +Y++ +S L Q
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRH---ESPLDAIQVYL 106
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
MV + D SL V+ A + + GK++H AVR G D F + + +Y K G
Sbjct: 107 GMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAG 166
Query: 149 MMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
FENA +F+ EN E + SW+ +I
Sbjct: 167 E-------------------------------FENARKVFD----ENPERKLGSWNAIIG 191
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
G G EA+ +F M+ +P++ T+VS+ + C +G L + H KC+L
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH----KCVLQA 247
Query: 269 DRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDS 328
++ +++++N++IDMY KC + +A IF+ + + RNVV+W++MI GYA +G ++
Sbjct: 248 KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM--RQRNVVSWSSMIVGYAANGNTLEA 305
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANC 387
LE F QM ++ V+PN T L AC + G+ A +++++++ + L C
Sbjct: 306 LECFRQM--REFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGC 362
Query: 388 LIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEA 432
++D S+ G + A+ V + M K N + W L+ G G E A
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
F + +T+Y + G ++AR++FDE + + L SWN+++ +G A+ +F
Sbjct: 153 FCESGFITLYCKAGEFENARKVFDENPERK---LGSWNAIIGGLNHAGRANEAVEMFV-- 207
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE--DVFVGNSLVDMYA 145
+M ++ D ++V+V + +G Q+H +++ E D+ + NSL+DMY
Sbjct: 208 -DMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYG 266
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG M AS +FE M++++VVSW++M+ GY+ G AL F QMRE + + +++
Sbjct: 267 KCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVG 326
Query: 206 VIAGYAQKGLGYEALNVFRQMQS 228
V++ GL E F M+S
Sbjct: 327 VLSACVHGGLVEEGKTYFAMMKS 349
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S++ + N+++ MYG+CG +D A +F+EM + ++VSW+SM+ Y +G+T AL F
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR---NVVSWSSMIVGYAANGNTLEALECF 309
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPA-----FASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
++M E ++ + ++ V VL A G +F F + GL
Sbjct: 310 RQMREF---GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY----GC 362
Query: 140 LVDMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENA 184
+VD+ ++ G + EA KV E M K +V+ W ++ G G E A
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 292/613 (47%), Gaps = 109/613 (17%)
Query: 26 NVFVCNAVVTMYGRCGA---LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+V N +++ Y CG L+ AR++FDEM + F SWN+M++ Y ++ AL
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSF---SWNTMISGYAKNRRIGEALL 157
Query: 83 LFQKMWEMVDV-----------DIQLD-AVSLVNVLPA-----------------FASMG 113
LF+KM E V + ++D AV L +P S
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 114 SWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK----------- 162
+W G+ +G V SG + V+ N+L+ Y + G + A +F+++
Sbjct: 218 AWVLGQ--YGSLV-SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 163 ----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYE 218
K+VVSWN+M+ Y +G +A LF+QM++ D +SW+T+I GY +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMED 330
Query: 219 ALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLV 278
A +F +M PN ++ H +
Sbjct: 331 AFALFSEM------PN--------------------RDAHSW------------------ 346
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
N ++ Y ++ +AR F+ K + V+W ++I Y ++ + ++++LF +M +
Sbjct: 347 -NMMVSGYASVGNVELARHYFEKTPEK--HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
KP+ T++ L A L LR G ++H V++ + V N LI YS+ G+I
Sbjct: 404 GE--KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD--VPVHNALITMYSRCGEI 459
Query: 399 DVARVVFDNMKHKNAV-SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
+R +FD MK K V +W ++I GY HG EA+ +F M+ G+ P ITF+ +L A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQV 517
C+H+G+VDE F M Y + P EHY+ +V++ G+ ++AM +I MP +P +
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT 579
Query: 518 VWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
VW ALL CR + NV L AA + LE E+ Y LL N+YA+ W + +++R M+
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 578 HTGIKKRPGCSWV 590
IKK G SWV
Sbjct: 640 SKRIKKERGSSWV 652
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 220/538 (40%), Gaps = 144/538 (26%)
Query: 39 RCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
R G + AR +F+++ E + V+WN+M++ YV+ + A LF
Sbjct: 52 RSGYIAEARDIFEKL---EARNTVTWNTMISGYVKRREMNQARKLF-------------- 94
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG---MMHEASK 155
+V+P DV N+++ Y CG + EA K
Sbjct: 95 -----DVMPK-----------------------RDVVTWNTMISGYVSCGGIRFLEEARK 126
Query: 156 VFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
+F+ M +D SWN M++GY+ AL LFE+M E N VSWS +I G+ Q G
Sbjct: 127 LFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN----AVSWSAMITGFCQNGE 182
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSG-------------CASVGALIHGKETHCY-- 260
A+ +FR+M S P L +L++G G+L+ G+E Y
Sbjct: 183 VDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAY 238
Query: 261 --------------TIKCILNY--DRCDQD-----------ELLVINAIIDMYTKCKSIS 293
+C+ + D C D ++ N++I Y K +
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVV 298
Query: 294 VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
AR +FD + KDR+ ++W MI GY D+ LFS+M PN
Sbjct: 299 SARLLFDQM--KDRDTISWNTMIDGYVHVSRMEDAFALFSEM--------PN-------- 340
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNA 413
R+ H++ N ++ Y+ G++++AR F+ K+
Sbjct: 341 ------------RDAHSW--------------NMMVSGYASVGNVELARHYFEKTPEKHT 374
Query: 414 VSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSC 473
VSW S+I Y + +EAV +F M EG PD T +L A + + G++
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI 434
Query: 474 MSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHEN 531
+ K VIP + ++ + R G + ++ ++ + M +K + W A++ G H N
Sbjct: 435 VVKT--VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++VF+ ++V MY +CG + AR++FDE+ + D+V W +M+A + ALG
Sbjct: 245 LFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER---DIVVWGAMIAGLAHNKRQWEALG 301
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF-EDVFVGNSLV 141
LF+ M + + I ++V L +LP + + GK+VH ++S + E FV + L+
Sbjct: 302 LFRTM--ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLI 359
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
D+Y KCG M +VF ++++ +S
Sbjct: 360 DLYCKCGDMASGRRVFYGSKQRNAIS---------------------------------- 385
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
W+ +++GYA G +AL MQ +P+ VT+ ++L CA + A+ GKE HCY
Sbjct: 386 -WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K + + ++ +++ MY+KC +FD + + RNV WTAMI Y +
Sbjct: 445 LKNLF------LPNVSLVTSLMVMYSKCGVPEYPIRLFDRL--EQRNVKAWTAMIDCYVE 496
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+ + +E+F ML +P++ T+ L C+ L AL+ G+E+H ++L+ +++S +
Sbjct: 497 NCDLRAGIEVFRLMLLSKH--RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFES-I 553
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+V+ +I Y K GD+ A FD + K +++WT++I YG + +A+ FE+M
Sbjct: 554 PFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS 613
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLD 501
G P+ TF +L CS +G VDE ++F+ M + Y + P EEHY+ +++LL R GR++
Sbjct: 614 RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVE 673
Query: 502 KAMKL 506
+A +L
Sbjct: 674 EAQRL 678
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 246/508 (48%), Gaps = 56/508 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L SN F+ +V MY CG++ A+++FDE S ++ SWN+++ V SG K
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVY---SWNALLRGTVISGK-KRYQD 197
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ EM ++ + L+ SL NV +FA + G + H A+++GLF VF+ SLVD
Sbjct: 198 VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVD 257
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM-REENIELDVV 201
MY KCG + A +VF+ + ++D+V W AM+ G +H AL LF M EE I
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI----- 312
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
PN V L ++L V AL GKE H +
Sbjct: 313 ------------------------------YPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K NY ++ V + +ID+Y KC ++ R +F K RN ++WTA++ GYA
Sbjct: 343 LKS-KNY----VEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQRNAISWTALMSGYAA 395
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+G + +L M Q +P+ TI+ L CA L A++ G+EIH Y L+N + +V
Sbjct: 396 NGRFDQALRSIVWM--QQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNV 453
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
V + ++ YSK G + +FD ++ +N +WT++I Y + ++VF M
Sbjct: 454 SLVTSLMV-MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLL 512
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIK-YFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
PD +T +L CS + G + + + KE+ IP A ++ + G+ G L
Sbjct: 513 SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDL 570
Query: 501 DKAMKLIEGMPMKPGQVVWVALLS--GC 526
A + + +K G + W A++ GC
Sbjct: 571 RSANFSFDAVAVK-GSLTWTAIIEAYGC 597
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 214/431 (49%), Gaps = 48/431 (11%)
Query: 95 IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEAS 154
I ++A + +L A S GKQVH +GL + F+ LV MY CG + +A
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 155 KVFERMQKKDVVSWNAMVTGYSHIG--MFENALTLFEQMREENIELDVVSWSTVIAGYAQ 212
KVF+ +V SWNA++ G G +++ L+ F +MRE ++L+V S S
Sbjct: 167 KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS-------- 218
Query: 213 KGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD 272
NVF+ A AL G +TH IK L
Sbjct: 219 --------NVFKSF-------------------AGASALRQGLKTHALAIKNGLF----- 246
Query: 273 QDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELF 332
+ + + +++DMY KC + +AR +FD + +R++V W AMI G A + ++L LF
Sbjct: 247 -NSVFLKTSLVDMYFKCGKVGLARRVFDEIV--ERDIVVWGAMIAGLAHNKRQWEALGLF 303
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
M+ +++ + PN+ ++ L + AL+ G+E+HA+VL+++ + +V + LID Y
Sbjct: 304 RTMISEEK-IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLY 362
Query: 393 SKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFL 452
K GD+ R VF K +NA+SWT+L++GY +G+ ++A++ M++EG PD +T
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 453 VMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM 512
+L C+ + +G K C + + +P ++ + + G + ++L + +
Sbjct: 423 TVLPVCAELRAIKQG-KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ 481
Query: 513 KPGQVVWVALL 523
+ + W A++
Sbjct: 482 RNVK-AWTAMI 491
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 145/310 (46%), Gaps = 15/310 (4%)
Query: 219 ALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLV 278
AL + ++ N T +LL C +L+HGK+ H + + + + +E L
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH-----IRINGLESNEFLR 149
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA--NDSLELFSQML 336
++ MYT C S+ A+ +FD NV +W A++ G G+ D L F++M
Sbjct: 150 -TKLVHMYTACGSVKDAQKVFDEST--SSNVYSWNALLRGTVISGKKRYQDVLSTFTEM- 205
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
++ V N +++S + A +ALR G + HA ++N + V ++ L+D Y K G
Sbjct: 206 -RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV-FLKTSLVDMYFKCG 263
Query: 397 DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM-RKEGLLPDGITFLVML 455
+ +AR VFD + ++ V W ++I G + + EA+ +F M +E + P+ + +L
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 456 YACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPG 515
+ G + + + K + ++ ++DL + G + ++ G +
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR-N 382
Query: 516 QVVWVALLSG 525
+ W AL+SG
Sbjct: 383 AISWTALMSG 392
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 262/501 (52%), Gaps = 18/501 (3%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMY-AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
KQ+H +++GL D + ++ A M+ A VF R+ K+ WN ++ G+S
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 178 IGMFENALTLFEQM--REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
E A+++F M +++ +++ +V Y + G + + + + +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
++L + G LI I +D ++ N++I + KC I A
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMI----GFD------VVAWNSMIMGFAKCGLIDQA 211
Query: 296 RAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
+ +FD + RN V+W +MI G+ ++G D+L++F +M Q++ VKP+ FT+ L A
Sbjct: 212 QNLFDEMP--QRNGVSWNSMISGFVRNGRFKDALDMFREM--QEKDVKPDGFTMVSLLNA 267
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA L A GR IH Y++RN+++ + + V LID Y K G I+ VF+ K
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSI-VVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W S+I G +G E A+ +F E+ + GL PD ++F+ +L AC+HSG V ++F M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
++Y + P +HY MV++LG AG L++A LI+ MP++ V+W +LLS CRK NV++
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
+ AA L +L+ + Y LLSN YA+ +++ R LMK ++K GCS ++
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 596 TATFFVGDRTHPQSERMYAIL 616
F THP+S +Y++L
Sbjct: 507 VHEFISCGGTHPKSAEIYSLL 527
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 216/408 (52%), Gaps = 19/408 (4%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
WN+++ + +S + A+ +F M ++ ++ +V A+ +G G+Q+HG
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDML-CSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
++ GL +D F+ N+++ MY CG + EA ++F M DVV+WN+M+ G++ G+ +
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
A LF++M + N VSW+++I+G+ + G +AL++FR+MQ KP+ T+VSLL+
Sbjct: 211 AQNLFDEMPQRN----GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 244 GCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVA 303
CA +GA G+ H Y ++ +R + + +V+ A+IDMY KC I +F+ A
Sbjct: 267 ACAYLGASEQGRWIHEYIVR-----NRFELNS-IVVTALIDMYCKCGCIEEGLNVFE-CA 319
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALR 363
PK + + W +MI G A +G +++LFS++ + ++P++ + L ACA +
Sbjct: 320 PK-KQLSCWNSMILGLANNGFEERAMDLFSEL--ERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 364 SGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-HKNAVSWTSLITG 422
E + + +++ +G ++ A + NM ++ V W+SL++
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY-ACSHSGMVDEGIK 469
G E A + + ++K L PD V+L A + G+ +E ++
Sbjct: 437 CRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 126/222 (56%), Gaps = 12/222 (5%)
Query: 12 FCSCCCLV*-W-----VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWN 65
+ +C CL+ W ++ +V N+++ + +CG +D A+ +FDEM + + VSWN
Sbjct: 171 YVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR---NGVSWN 227
Query: 66 SMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFA 125
SM++ +V++G K AL +F++M E D++ D ++V++L A A +G+ G+ +H +
Sbjct: 228 SMISGFVRNGRFKDALDMFREMQEK---DVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 126 VRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENAL 185
VR+ + V +L+DMY KCG + E VFE KK + WN+M+ G ++ G E A+
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 186 TLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
LF ++ +E D VS+ V+ A G + A FR M+
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 360 AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSL 419
+ +R ++IHA +++ SD + + L + D++ A +VF + HKN W ++
Sbjct: 36 STMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTI 95
Query: 420 ITGYGMHGQGEEAVKVFEEM--RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
I G+ E A+ +F +M + P +T+ + A G +G + + KE
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEF 537
G+ M+ + G L +A ++ GM + V W +++ G K L +
Sbjct: 156 -GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM-IGFDVVAWNSMIMGFAK---CGLIDQ 210
Query: 538 AANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
A N E+ N S+ + + + R+KD + M+ +K
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 241/428 (56%), Gaps = 20/428 (4%)
Query: 164 DVVSWNAMVTGYSHIG-MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
+VV + +V YS + +F +L++F M NI SW+ +I +++ G +++++
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNI----FSWNIIIGEFSRSGFASKSIDL 101
Query: 223 FRQM--QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
F +M +SC +P++ TL +L C++ G H +K + L V +
Sbjct: 102 FLRMWRESC-VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFS------SSLFVSS 154
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
A++ MY + AR +FD + +D V +TAM GGY Q GEA L +F +M
Sbjct: 155 ALVIMYVDMGKLLHARKLFDDMPVRDS--VLYTAMFGGYVQQGEAMLGLAMFREMGYSGF 212
Query: 341 SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDV 400
++ ++ + LMAC +L AL+ G+ +H + +R + L + N + D Y K +D
Sbjct: 213 AL--DSVVMVSLLMACGQLGALKHGKSVHGWCIR-RCSCLGLNLGNAITDMYVKCSILDY 269
Query: 401 ARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH 460
A VF NM ++ +SW+SLI GYG+ G + K+F+EM KEG+ P+ +TFL +L AC+H
Sbjct: 270 AHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 329
Query: 461 SGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWV 520
G+V++ YF M +EY ++P +HYA + D + RAG L++A K +E MP+KP + V
Sbjct: 330 GGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMG 388
Query: 521 ALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTG 580
A+LSGC+ + NV++GE A +L++L+ Y L+ +Y+ A R+ + +R MK
Sbjct: 389 AVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQ 448
Query: 581 IKKRPGCS 588
I K PGCS
Sbjct: 449 ISKVPGCS 456
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 206/472 (43%), Gaps = 71/472 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGAL-DHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L SNV + + +V Y + L + +F M IF SWN ++ + +SG ++
Sbjct: 43 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIF---SWNIIIGEFSRSGFASKSI 99
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF +MW + ++ D +L +L A ++ G +H ++ G +FV ++LV
Sbjct: 100 DLFLRMWR--ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALV 157
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
MY G + A K+F+ M +D V + AM GY G L +F +M LD
Sbjct: 158 IMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD-- 215
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
V +VSLL C +GAL HGK H +
Sbjct: 216 ---------------------------------SVVMVSLLMACGQLGALKHGKSVHGWC 242
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
I+ RC L + NAI DMY KC + A +F V R+V++W+++I GY
Sbjct: 243 IR------RCSCLGLNLGNAITDMYVKCSILDYAHTVF--VNMSRRDVISWSSLILGYGL 294
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL-------RSGREIHAYVLR 374
G+ S +LF +MLK+ ++PNA T L ACA + R +E +
Sbjct: 295 DGDVVMSFKLFDEMLKE--GIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPEL 352
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAV 433
Y S VA+C+ S++G ++ A ++M K + ++++G ++G E
Sbjct: 353 KHYAS----VADCM----SRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 404
Query: 434 KVFEEMRKEGLLPDGITFLVMLYAC-SHSGMVDEGIKYFSCMS-KEYGVIPG 483
+V E+ + L P ++ V L S +G DE M K+ +PG
Sbjct: 405 RVARELIQ--LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 454
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 16/328 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+S++FV +A+V MY G L HAR++FD+M + D V + +M YVQ G+ L
Sbjct: 146 FSSSLFVSSALVIMYVDMGKLLHARKLFDDM---PVRDSVLYTAMFGGYVQQGEAMLGLA 202
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+F+ EM LD+V +V++L A +G+ GK VHG+ +R + +GN++ D
Sbjct: 203 MFR---EMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 259
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY KC ++ A VF M ++DV+SW++++ GY G + LF++M +E IE + V+
Sbjct: 260 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 319
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
+ V++ A GL ++ FR MQ + P E+ + ++ C S L+ E
Sbjct: 320 FLGVLSACAHGGLVEKSWLYFRLMQEYNIVP-ELKHYASVADCMSRAGLLEEAEK----- 373
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVA-RAIFDSVAPKDRNVVTWTAMIGGYAQ 321
L DE V+ A++ ++ V R + + K R + + G Y+
Sbjct: 374 --FLEDMPVKPDE-AVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSA 430
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTI 349
G +++ L M ++ S P +I
Sbjct: 431 AGRFDEAESLRQWMKEKQISKVPGCSSI 458
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 274/548 (50%), Gaps = 53/548 (9%)
Query: 43 LDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
L AR++FD + +F WNS++ AY ++ + L LF +++ D + D +
Sbjct: 56 LISARKLFDVFPERSVF---LWNSIIRAYAKAHQFTTVLSLFS---QILRSDTRPDNFTY 109
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
+ F+ + +HG A+ SGL D G+
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS------------------------ 145
Query: 163 KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
A+V YS G+ A LF + + ++ L W+ +I GY G + +N+
Sbjct: 146 -------AIVKAYSKAGLIVEASKLFCSIPDPDLAL----WNVMILGYGCCGFWDKGINL 194
Query: 223 FRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAI 282
F MQ +PN T+V+L SG L+ H + +K +N D V A+
Sbjct: 195 FNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK--INLD----SHSYVGCAL 248
Query: 283 IDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
++MY++C I+ A ++F+S++ D +V +++I GY++ G ++L LF+++ +
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPD--LVACSSLITGYSRCGNHKEALHLFAELRMSGK-- 304
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR 402
KP+ ++ L +CA L+ SG+E+H+YV+R + D+ V + LID YSK G + A
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDI-KVCSALIDMYSKCGLLKCAM 363
Query: 403 VVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+F + KN VS+ SLI G G+HG A + F E+ + GL+PD ITF +L C HSG
Sbjct: 364 SLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSG 423
Query: 463 MVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVAL 522
++++G + F M E+G+ P EHY MV L+G AG+L++A + + + + AL
Sbjct: 424 LLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGAL 483
Query: 523 LSGCRKHENVKLGEFAANKLLELESENDGSY-TLLSNIYANARRWKDVTRIRSLMKHTGI 581
LS C HEN L E A + + E Y +LSN+YA RW +V R+R + +
Sbjct: 484 LSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYG 543
Query: 582 KKRPGCSW 589
K PG SW
Sbjct: 544 GKLPGISW 551
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 6/206 (2%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+S+ +V A+V MY RC + A +F+ + + DLV+ +S++ Y + G+ K AL
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEP---DLVACSSLITGYSRCGNHKEALH 294
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF E+ + D V + VL + A + GK+VH + +R GL D+ V ++L+D
Sbjct: 295 LFA---ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALID 351
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MY+KCG++ A +F + +K++VS+N+++ G G A F ++ E + D ++
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQS 228
+S ++ GL + +F +M+S
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFERMKS 437
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 224/377 (59%), Gaps = 13/377 (3%)
Query: 258 HCYT-IKCILNYDRCDQD----ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTW 312
+CY + + + RC D ++ I +I Y K A ++F ++ +R+VVTW
Sbjct: 15 NCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP--ERSVVTW 72
Query: 313 TAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV 372
A+IGG++Q G +++ F ML++ V PN T C++ A + +A+ +G+ IHA
Sbjct: 73 NAVIGGFSQTGRNEEAVNTFVDMLREG-VVIPNESTFPCAITAISNIASHGAGKSIHACA 131
Query: 373 LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK--HKNAVSWTSLITGYGMHGQGE 430
++ ++V N LI YSK G+++ + + F+ ++ +N VSW S+I GY +G+GE
Sbjct: 132 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 191
Query: 431 EAVKVFEEMRKE-GLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG--VIPGEEHY 487
EAV +FE+M K+ L P+ +T L +L+AC+H+G++ EG YF+ +Y + EHY
Sbjct: 192 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY 251
Query: 488 ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELES 547
ACMVD+L R+GR +A +LI+ MP+ PG W ALL GC+ H N +L + AA+K+LEL+
Sbjct: 252 ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDP 311
Query: 548 ENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHP 607
+ SY +LSN Y+ W++V+ IR MK TG+K+ GCSW++ + F D+ +
Sbjct: 312 RDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNE 371
Query: 608 QSERMYAILTELIQRIK 624
+ +Y +L + Q ++
Sbjct: 372 LKDEVYRMLALVSQHLE 388
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 169/335 (50%), Gaps = 24/335 (7%)
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLF 188
GL +VFVG+++++ Y K + +A + F+ + +VVS +++GY FE AL+LF
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCAS 247
M E + VV+W+ VI G++Q G EA+N F M + PNE T ++ ++
Sbjct: 62 RAMPERS----VVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 117
Query: 248 VGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR 307
+ + GK H IK + + + V N++I Y+KC ++ + F+ + + R
Sbjct: 118 IASHGAGKSIHACAIKFL-----GKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQR 172
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
N+V+W +MI GYA +G +++ +F +M+K D +++PN TI L AC ++ G
Sbjct: 173 NIVSWNSMIWGYAHNGRGEEAVAMFEKMVK-DTNLRPNNVTILGVLFACNHAGLIQEGYM 231
Query: 368 IHAYVLRNQYDSDVLYVAN--CLIDTYSKSGDIDVARVVFDNMKHKNAVS-WTSLITGYG 424
+ + D ++L + + C++D S+SG A + +M + W +L+ G
Sbjct: 232 YFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQ 291
Query: 425 MHGQGE----EAVKVFEEMRKEGLLPDGITFLVML 455
+H A K+ E L P ++ VML
Sbjct: 292 IHSNKRLAKLAASKILE------LDPRDVSSYVML 320
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 158/349 (45%), Gaps = 73/349 (20%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L SNVFV +AV+ Y + L AR+ FD+ + VS ++++ Y++ + + AL
Sbjct: 3 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV---VSITNLISGYLKKHEFEEALS 59
Query: 83 LFQKM-------WEMVD----------------VDIQLDAVSLVN------VLPAFASMG 113
LF+ M W V VD+ + V + N + A +++
Sbjct: 60 LFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIA 119
Query: 114 SWWFGKQVHGFAVRS-GLFEDVFVGNSLVDMYAKCGMMHEASKVFERM--QKKDVVSWNA 170
S GK +H A++ G +VFV NSL+ Y+KCG M ++ F ++ +++++VSWN+
Sbjct: 120 SHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNS 179
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
M+ GY+H G E A+ +FE+M ++ +
Sbjct: 180 MIWGYAHNGRGEEAVAMFEKM----------------------------------VKDTN 205
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
+PN VT++ +L C G + +E + Y K + +YD + EL ++DM ++
Sbjct: 206 LRPNNVTILGVLFACNHAGLI---QEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSG 262
Query: 291 SISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
A + S+ P D + W A++GG H + S++L+ D
Sbjct: 263 RFKEAEELIKSM-PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELD 310
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
++V + +++ Y K + AR FD+ + N VS T+LI+GY + EEA+ +F M +
Sbjct: 7 VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPE 66
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR----- 496
+ +T+ ++ S +G +E + F M +E VIP E + C + +
Sbjct: 67 RSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG 122
Query: 497 AGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLL 556
AG+ A I+ + + VW +L+S K N++ A NK LE E N S+ +
Sbjct: 123 AGKSIHACA-IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK-LEEEQRNIVSWNSM 180
Query: 557 SNIYA-NARRWKDVTRIRSLMKHTGIK 582
YA N R + V ++K T ++
Sbjct: 181 IWGYAHNGRGEEAVAMFEKMVKDTNLR 207
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 238/427 (55%), Gaps = 21/427 (4%)
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+W+ + GY+ E++ V+ +M+ KPN++T LL CAS L G++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
+K ++D + V N +I +Y CK S AR +FD + +RNVV+W +++ +
Sbjct: 140 LKHGFDFD------VYVGNNLIHLYGTCKKTSDARKVFDEMT--ERNVVSWNSIMTALVE 191
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
+G+ N E F +M+ + P+ T+ L AC L G+ +H+ V+ + + +
Sbjct: 192 NGKLNLVFECFCEMI--GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
+ L+D Y+KSG ++ AR+VF+ M KN +W+++I G +G EEA+++F +M K
Sbjct: 248 -RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Query: 442 EG-LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
E + P+ +TFL +L ACSH+G+VD+G KYF M K + + P HY MVD+LGRAGRL
Sbjct: 307 ESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRL 366
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKH---ENVKLGEFAANKLLELESENDGSYTLLS 557
++A I+ MP +P VVW LLS C H ++ +GE +L+ELE + G+ +++
Sbjct: 367 NEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVA 426
Query: 558 NIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILT 617
N +A AR W + +R +MK T +KK G S ++ FF G P+SE Y +
Sbjct: 427 NRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG--YDPRSE--YVSIY 482
Query: 618 ELIQRIK 624
EL+ K
Sbjct: 483 ELLDLFK 489
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 64/388 (16%)
Query: 63 SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVH 122
+WN + Y S ++ ++ EM I+ + ++ +L A AS G+Q+
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYS---EMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 123 GFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE 182
++ G DV+VGN+L+ +Y C +A KVF+ M +++
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN------------------ 178
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
VVSW++++ + G F +M P+E T+V LL
Sbjct: 179 -----------------VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL 221
Query: 243 SGCA---SVGALIHGK-ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
S C S+G L+H + + C L A++DMY K + AR +
Sbjct: 222 SACGGNLSLGKLVHSQVMVRELELNCRLG------------TALVDMYAKSGGLEYARLV 269
Query: 299 FDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
F+ + D+NV TW+AMI G AQ+G A ++L+LFS+M+K+ SV+PN T L AC+
Sbjct: 270 FERMV--DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES-SVRPNYVTFLGVLCACSH 326
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWT 417
+ G + + + ++ ++D ++G ++ A M + +AV W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 418 SLITGYGMH------GQGEEAVKVFEEM 439
+L++ +H G GE+ K E+
Sbjct: 387 TLLSACSIHHDEDDEGIGEKVKKRLIEL 414
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 10/210 (4%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+V+V N ++ +YG C AR++FDEM + + VSWNS++ A V++G +F+
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNV---VSWNSIMTALVENGKLNL---VFE 200
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM+ D ++V +L A G+ GK VH + L + +G +LVDMYA
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQ-MREENIELDVVSWS 204
K G + A VFERM K+V +W+AM+ G + G E AL LF + M+E ++ + V++
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFL 318
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHS-KP 233
V+ + GL + F +M+ H KP
Sbjct: 319 GVLCACSHTGLVDDGYKYFHEMEKIHKIKP 348
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 228 SCHSKPNEVTLVSLLSGCASVGAL--IHGKETHCYTIKCILNYDRCDQDELLVINAIIDM 285
SC L+ L C+S+ L IHG + H ++ Q++ +I+ ++ +
Sbjct: 7 SCFKSRKHQCLI-FLKLCSSIKHLLQIHG-QIHLSSL----------QNDSFIISELVRV 54
Query: 286 --YTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVK 343
+ K ++ AR + + D TW + GY+ +S+ ++S+M + R +K
Sbjct: 55 SSLSLAKDLAFARTLL--LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEM--KRRGIK 110
Query: 344 PNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARV 403
PN T L ACA L +GR+I VL++ +D DV YV N LI Y AR
Sbjct: 111 PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV-YVGNNLIHLYGTCKKTSDARK 169
Query: 404 VFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
VFD M +N VSW S++T +G+ + F EM + PD T +V+L AC
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC 224
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L N + A+V MY + G L++AR +F+ M ++ +W++M+ Q G + AL
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVW---TWSAMIVGLAQYGFAEEALQ 299
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFG-KQVHGFAVRSGLFEDVFVGNSLV 141
LF KM M + ++ + V+ + VL A + G G K H + + ++V
Sbjct: 300 LFSKM--MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMV 357
Query: 142 DMYAKCGMMHEASKVFERMQ-KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
D+ + G ++EA ++M + D V W +++ S I E+ + E++++ IEL+
Sbjct: 358 DILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACS-IHHDEDDEGIGEKVKKRLIELEP 416
Query: 201 V-SWSTVIAG--YAQKGLGYEALNVFRQMQSCHSK 232
S + VI +A+ + EA V R M+ K
Sbjct: 417 KRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMK 451
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 277/562 (49%), Gaps = 56/562 (9%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N+FV +A+V +Y +D A ++FDEM +L N ++ + Q+G++K LF+
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDR---NLAVCNLLLRCFCQTGESKR---LFE 199
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL-FEDVFVGNSLVDMY 144
M + + ++ ++ + + GKQ+H V+SG ++FV N LVD Y
Sbjct: 200 VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+ CG + + + F + +K DV+SW+
Sbjct: 260 SACGDLSGSMRSFNAVPEK-----------------------------------DVISWN 284
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
++++ A G ++L++F +MQ +P+ +S L+ C+ + GK+ HCY +K
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK- 343
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+ +D L V +A+IDMY KC I + ++ S+ N+ +++ G
Sbjct: 344 -MGFD---VSSLHVQSALIDMYGKCNGIENSALLYQSLPCL--NLECCNSLMTSLMHCGI 397
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
D +E+F M+ + + + ++ + +L S +H +++ Y +DV V
Sbjct: 398 TKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADV-AV 456
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGL 444
+ LID Y+KSG +V+R VFD + N TS+I GY +G G + VK+ EM + L
Sbjct: 457 SCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNL 516
Query: 445 LPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
+PD +T L +L CSHSG+V+EG F + +YG+ PG + YACMVDLLGRAG ++KA
Sbjct: 517 IPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAE 576
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYAN-- 562
+L+ V W +LL CR H N +G AA L+ LE EN Y +S Y
Sbjct: 577 RLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Query: 563 ----ARRWKDVTRIRSLMKHTG 580
+R+ +++ R LM+ G
Sbjct: 637 DFEISRQIREIAASRELMREIG 658
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 197/423 (46%), Gaps = 50/423 (11%)
Query: 39 RCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
+ G L A + FDEM + D+V++N +++ + G + A+ L+ EMV ++
Sbjct: 58 KSGNLLSAHEAFDEM---SVRDVVTYNLLISGNSRYGCSLRAIELYA---EMVSCGLRES 111
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFE 158
A + +VL + G QVH + G ++FV ++LV +YA ++ A K+F+
Sbjct: 112 ASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFD 171
Query: 159 RMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYE 218
M +++ N ++ + G + ++ +M E G A+ GL Y
Sbjct: 172 EMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE--------------GVAKNGLTY- 216
Query: 219 ALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLV 278
C+ ++ GC+ + GK+ H +K N + V
Sbjct: 217 ----------CY----------MIRGCSHDRLVYEGKQLHSLVVKSGWNI-----SNIFV 251
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
N ++D Y+ C +S + F++V KD V++W +++ A +G DSL+LFS+M Q
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKD--VISWNSIVSVCADYGSVLDSLDLFSKM--Q 307
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
+P+ L C+R + ++SG++IH YVL+ +D L+V + LID Y K I
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 399 DVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
+ + +++ ++ N SL+T G ++ +++F M EG D +T +L A
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 459 SHS 461
S S
Sbjct: 428 SLS 430
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 189/425 (44%), Gaps = 54/425 (12%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SN+FV N +V Y CG L + + F+ + + D++SWNS+V+ G +L LF
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEK---DVISWNSIVSVCADYGSVLDSLDLF 303
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGL-FEDVFVGNSLVDM 143
KM +S +N + + S GKQ+H + ++ G + V ++L+DM
Sbjct: 304 SKMQFWGKRPSIRPFMSFLNFCSRNSDIQS---GKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
Y KC + ++ +++ + ++ N+++T H G+ ++ + +F M +E +D V+
Sbjct: 361 YGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTL 420
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
STV+ +L++ + SC TLV HC IK
Sbjct: 421 STVLKAL--------SLSLPESLHSC-------TLV------------------HCCAIK 447
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
D + V ++ID YTK V+R +FD + N+ T++I GYA++G
Sbjct: 448 SGYAAD------VAVSCSLIDAYTKSGQNEVSRKVFDELDTP--NIFCLTSIINGYARNG 499
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
D +++ +M + + + P+ TI L C+ + G I + S
Sbjct: 500 MGTDCVKMLREMDRMN--LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 384 VANCLIDTYSKSGDIDVA-RVVFDNMKHKNAVSWTSLITGYGMHGQ---GEEAVKVFEEM 439
+ C++D ++G ++ A R++ + V+W+SL+ +H G A +V +
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNL 617
Query: 440 RKEGL 444
E
Sbjct: 618 EPENF 622
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 163/330 (49%), Gaps = 13/330 (3%)
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
N L+ E E ++ DVV+++ +I+G ++ G A+ ++ +M SC + + T S+L
Sbjct: 61 NLLSAHEAFDEMSVR-DVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 243 SGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV 302
S C+ G + HC I L + C+ + V +A++ +Y + + VA +FD +
Sbjct: 120 SVCSDELFCREGIQVHCRVIS--LGFG-CN---MFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 303 APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
DRN+ ++ + Q GE+ E++ +M + V N T + C+ +
Sbjct: 174 L--DRNLAVCNLLLRCFCQTGESKRLFEVYLRM--ELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITG 422
G+++H+ V+++ ++ ++VAN L+D YS GD+ + F+ + K+ +SW S+++
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
+G +++ +F +M+ G P F+ L CS + + G K C + G
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG-KQIHCYVLKMGFDV 348
Query: 483 GEEHY-ACMVDLLGRAGRLDKAMKLIEGMP 511
H + ++D+ G+ ++ + L + +P
Sbjct: 349 SSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
SD++Y N ID KSG++ A FD M ++ V++ LI+G +G A++++ E
Sbjct: 43 SDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAE 102
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M GL TF +L CS EGI+ C G + +V L
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQ-VHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSN 558
+D A+KL + M + V + L C+ E+ +L E LE ++N +Y +
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 559 IYANARRWKDVTRIRSLMKHTG 580
++ R + ++ SL+ +G
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSG 243
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 204/348 (58%), Gaps = 7/348 (2%)
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
++++ +Y + A +F+ + +RNVV+WTAMI G+AQ + L+L+S+M K
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMP--ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS- 215
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
+ PN +T + L AC AL GR +H L S L+++N LI Y K GD+
Sbjct: 216 -TSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS-YLHISNSLISMYCKCGDLK 273
Query: 400 VARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE-EMRKEGLLPDGITFLVMLYAC 458
A +FD +K+ VSW S+I GY HG +A+++FE M K G PD IT+L +L +C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 459 SHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVV 518
H+G+V EG K+F+ M+ E+G+ P HY+C+VDLLGR G L +A++LIE MPMKP V+
Sbjct: 334 RHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI 392
Query: 519 WVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKH 578
W +LL CR H +V G AA + L LE + ++ L+N+YA+ WK+ +R LMK
Sbjct: 393 WGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKD 452
Query: 579 TGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKVL 626
G+K PGCSW++ F D ++ + + +L LI ++ L
Sbjct: 453 KGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 154/322 (47%), Gaps = 46/322 (14%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
G H A++ G DV++G+SLV +Y G + A KVFE M +++VVSW AM++G++
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+ L L+ +MR+ S PN+ T
Sbjct: 199 EWRVDICLKLYSKMRKST-----------------------------------SDPNDYT 223
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+LLS C GAL G+ HC T+ L + L + N++I MY KC + A
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGL------KSYLHISNSLISMYCKCGDLKDAFR 277
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
IFD + KD VV+W +MI GYAQHG A ++ELF M+ + KP+A T L +C
Sbjct: 278 IFDQFSNKD--VVSWNSMIAGYAQHGLAMQAIELFELMMPKS-GTKPDAITYLGVLSSCR 334
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSW 416
++ GR+ + + ++ + + CL+D + G + A + +NM K N+V W
Sbjct: 335 HAGLVKEGRKFFNLMAEHGLKPELNHYS-CLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 417 TSLITGYGMHGQGEEAVKVFEE 438
SL+ +HG ++ EE
Sbjct: 394 GSLLFSCRVHGDVWTGIRAAEE 415
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
S+V++ +++V +Y G +++A ++F+EM + + VSW +M++ + Q L L+
Sbjct: 153 SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV---VSWTAMISGFAQEWRVDICLKLY 209
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
KM + +L++ ++G G+ VH + GL + + NSL+ MY
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQ---GRSVHCQTLHMGLKSYLHISNSLISMY 266
Query: 145 AKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFE-QMREENIELDVVSW 203
KCG + +A ++F++ KDVVSWN+M+ GY+ G+ A+ LFE M + + D +++
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITY 326
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
V++ GL E F M KP
Sbjct: 327 LGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
+A+ +S ++ +C R+G H L+ + SDV Y+ + L+ Y SG+++ A V
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDV-YLGSSLVVLYRDSGEVENAYKV 177
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMV 464
F+ M +N VSWT++I+G+ + + +K++ +MRK P+ TF +L AC+ SG +
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 465 DEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLS 524
+G + C + G+ ++ + + G L A ++ + K V W ++++
Sbjct: 238 GQG-RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD-VVSWNSMIA 295
Query: 525 GCRKH 529
G +H
Sbjct: 296 GYAQH 300
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L S + + N++++MY +CG L A ++FD+ D+VSWNSM+A Y Q G A+
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK---DVVSWNSMIAGYAQHGLAMQAIE 308
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF+ M M + DA++ + VL + G G++ GL ++ + LVD
Sbjct: 309 LFELM--MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Query: 143 MYAKCGMMHEASKVFERM-QKKDVVSWNAMV 172
+ + G++ EA ++ E M K + V W +++
Sbjct: 367 LLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 283/551 (51%), Gaps = 64/551 (11%)
Query: 45 HARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVN 104
HA +FDE+ + DL S NS ++++++SG+ L LF ++ L + +
Sbjct: 36 HADHLFDELPQR---DLSSLNSQLSSHLRSGNPNDTLALFLQIHR---ASPDLSSHTFTP 89
Query: 105 VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD 164
VL A + + G+QVH ++ G +L+DMY+K G + ++ +V
Sbjct: 90 VLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV-------- 141
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
FE + E+ D+VSW+ +++G+ + G G EAL VF
Sbjct: 142 -----------------------FESVEEK----DLVSWNALLSGFLRNGKGKEALGVFA 174
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID 284
M + +E TL S++ CAS+ L GK+ H + +D +++ A+I
Sbjct: 175 AMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT-------GRDLVVLGTAMIS 227
Query: 285 MYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
Y+ I+ A +++S+ V+ ++I G ++ ++ L S+ +P
Sbjct: 228 FYSSVGLINEAMKVYNSLNVHTDEVM-LNSLISGCIRNRNYKEAFLLMSRQ-------RP 279
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
N +S SL C+ + L G++IH LRN + SD + N L+D Y K G I AR +
Sbjct: 280 NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS-KLCNGLMDMYGKCGQIVQARTI 338
Query: 405 FDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG--LLPDGITFLVMLYACSHSG 462
F + K+ VSWTS+I Y ++G G +A+++F EM +EG +LP+ +TFLV++ AC+H+G
Sbjct: 339 FRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAG 398
Query: 463 MVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ----VV 518
+V EG + F M ++Y ++PG EHY C +D+L +AG ++ +L+E M Q +
Sbjct: 399 LVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAI 458
Query: 519 WVALLSGCRKHENVKLGEFAANKLL-ELESENDGSYTLLSNIYANARRWKDVTRIRSLMK 577
WVA+LS C + ++ GE+ A +L+ E EN Y L+SN YA +W V +R +K
Sbjct: 459 WVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLK 518
Query: 578 HTGIKKRPGCS 588
+ G+ K G S
Sbjct: 519 NKGLVKTAGHS 529
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
V + A+++ Y G ++ A ++++ + D V NS+++ +++ + K A L +
Sbjct: 219 VVLGTAMISFYSSVGLINEAMKVYNSLNVHT--DEVMLNSLISGCIRNRNYKEAFLLMSR 276
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
V V L + L + W GKQ+H A+R+G D + N L+DMY K
Sbjct: 277 QRPNVRV--------LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 147 CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREE--NIELDVVSWS 204
CG + +A +F + K VVSW +M+ Y+ G AL +F +M EE + + V++
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 205 TVIAGYAQKGLGYEALNVFRQMQ 227
VI+ A GL E F M+
Sbjct: 389 VVISACAHAGLVKEGKECFGMMK 411
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
+CN ++ MYG+CG + AR +F + + VSW SM+ AY +GD AL +F++M
Sbjct: 318 LCNGLMDMYGKCGQIVQARTIFRAIPSKSV---VSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF-AVRSGLFEDVFVGNSLVDMYAKC 147
E + ++V+ + V+ A A G GK+ G + L +D+ +K
Sbjct: 375 EE-GSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKA 433
Query: 148 GMMHEASKVFERMQKKD 164
G E ++ ERM + D
Sbjct: 434 GETEEIWRLVERMMEND 450
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 193/324 (59%), Gaps = 3/324 (0%)
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+++ W AMI GY Q G + L ++ M +Q+R V P+ +T + AC+ L L G+
Sbjct: 157 DLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIV-PDQYTFASVFRACSALDRLEHGKR 214
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHG 427
HA +++ S+++ V + L+D Y K VFD + +N ++WTSLI+GYG HG
Sbjct: 215 AHAVMIKRCIKSNII-VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 273
Query: 428 QGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY 487
+ E +K FE+M++EG P+ +TFLV+L AC+H G+VD+G ++F M ++YG+ P +HY
Sbjct: 274 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 333
Query: 488 ACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELES 547
A MVD LGRAGRL +A + + P K VW +LL CR H NVKL E AA K LEL+
Sbjct: 334 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 393
Query: 548 ENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHP 607
N G+Y + +N YA+ + +++R M++ G+KK PG S ++ + F D +H
Sbjct: 394 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHR 453
Query: 608 QSERMYAILTELIQRIKVLGYVPE 631
SE++Y + E+ + Y P+
Sbjct: 454 LSEKIYKKVHEMTSFFMDIDYYPD 477
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 23/268 (8%)
Query: 177 HIGMFENALTLFEQMREENIEL----DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
H MF L E ++ + + L D++ W+ +I+GY QKGL E L ++ M+
Sbjct: 131 HAQMFVVGFALNEYLKVKLLILYALSDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 190
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P++ T S+ C+++ L HGK H IK RC + ++V +A++DMY KC S
Sbjct: 191 PDQYTFASVFRACSALDRLEHGKRAHAVMIK------RCIKSNIIVDSALVDMYFKCSSF 244
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
S +FD ++ RNV+TWT++I GY HG+ ++ L+ F +M ++ +PN T
Sbjct: 245 SDGHRVFDQLS--TRNVITWTSLISGYGYHGKVSEVLKCFEKM--KEEGCRPNPVTFLVV 300
Query: 353 LMACARLAALRSGREIHAYVLRNQY--DSDVLYVANCLIDTYSKSGDIDVA-RVVFDNMK 409
L AC + G E H Y ++ Y + + + A ++DT ++G + A V +
Sbjct: 301 LTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYA-AMVDTLGRAGRLQEAYEFVMKSPC 358
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFE 437
++ W SL+ +HG VK+ E
Sbjct: 359 KEHPPVWGSLLGACRIHGN----VKLLE 382
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
DL+ WN+M++ YVQ G + L ++ ++M I D + +V A +++ GK
Sbjct: 157 DLIPWNAMISGYVQKGLEQEGLFIY---YDMRQNRIVPDQYTFASVFRACSALDRLEHGK 213
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
+ H ++ + ++ V ++LVDMY KC + +VF+++ ++V++W ++++GY + G
Sbjct: 214 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 273
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
L FE+M+EE + V++ V+ GL
Sbjct: 274 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 309
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ SN+ V +A+V MY +C + ++FD++ ++++W S+++ Y G L
Sbjct: 224 IKSNIIVDSALVDMYFKCSSFSDGHRVFDQL---STRNVITWTSLISGYGYHGKVSEVLK 280
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRS--GLFEDVFVGNSL 140
F+KM E + + V+ + VL A G G + H ++++ G+ + ++
Sbjct: 281 CFEKMKEE---GCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAM 336
Query: 141 VDMYAKCGMMHEASK-VFERMQKKDVVSWNAMVTG---YSHIGMFENALTLFEQMREENI 196
VD + G + EA + V + K+ W +++ + ++ + E A T F +
Sbjct: 337 VDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKF-------L 389
Query: 197 ELDVVSWSTVIA---GYAQKGLGYEALNVFRQMQSCHSKPN 234
ELD + + GYA GL A V R+M++ K +
Sbjct: 390 ELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 430
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 252/458 (55%), Gaps = 27/458 (5%)
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
VG+SL+ MY KCG + A KVF+ M +++V +WNAM+ GY G A LFE++ +
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---S 58
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
+ + V+W +I GY ++ +A +F +M P E+ V S +G ++ +
Sbjct: 59 VCRNTVTWIEMIKGYGKRIEIEKARELFERM------PFELKNVKAWS--VMLGVYVNNR 110
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
+ ++ + V + ++ Y + + ARAIF V +D +V W +
Sbjct: 111 KME----DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARD--LVIWNTL 164
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I GYAQ+G ++D+++ F M Q +P+A T+S L ACA+ L GRE+H+ +
Sbjct: 165 IAGYAQNGYSDDAIDAFFNM--QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR 222
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKV 435
+ + +V+N LID Y+K GD++ A VF+++ ++ S+I+ +HG+G+EA+++
Sbjct: 223 GIELN-QFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 281
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
F M L PD ITF+ +L AC H G + EG+K FS M K V P +H+ C++ LLG
Sbjct: 282 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLG 340
Query: 496 RAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYT- 554
R+G+L +A +L++ M +KP V ALL C+ H + ++ E K++E SY+
Sbjct: 341 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSE 399
Query: 555 ----LLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
+SN+YA+ RW+ +R M+ G++K PG S
Sbjct: 400 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 437
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 208/444 (46%), Gaps = 75/444 (16%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM- 87
V +++++MYG+CG + AR++FDEM + ++ +WN+M+ Y+ +GD A GLF+++
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPER---NVATWNAMIGGYMSNGDAVLASGLFEEIS 58
Query: 88 -------W-EMVD-----VDIQLDAVSLVNVLP-AFASMGSW--WFGKQVHGFAVRSG-- 129
W EM+ ++I+ A L +P ++ +W G V+ +
Sbjct: 59 VCRNTVTWIEMIKGYGKRIEIE-KARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARK 117
Query: 130 LFEDV-----FVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENA 184
FED+ FV + ++ Y + G +HEA +F R+ +D+V WN ++ GY+ G ++A
Sbjct: 118 FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 177
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
+ F M+ E E D V+ S++ LS
Sbjct: 178 IDAFFNMQGEGYEPDAVTVSSI-----------------------------------LSA 202
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
CA G L G+E H ++N+ + ++ V NA+IDMY KC + A ++F+S++
Sbjct: 203 CAQSGRLDVGREVH-----SLINHRGIELNQ-FVSNALIDMYAKCGDLENATSVFESISV 256
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
R+V +MI A HG+ ++LE+FS M D +KP+ T L AC L
Sbjct: 257 --RSVACCNSMISCLAIHGKGKEALEMFSTMESLD--LKPDEITFIAVLTACVHGGFLME 312
Query: 365 GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA-RVVFDNMKHKNAVSWTSLITGY 423
G +I + + +V + CLI +SG + A R+V + N +L+
Sbjct: 313 GLKIFSEMKTQDVKPNVKHFG-CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC 371
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPD 447
+H E A +V + + G + +
Sbjct: 372 KVHMDTEMAEQVMKIIETAGSITN 395
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N FV + +++ Y R G + AR +F Y+ DLV WN+++A Y Q+G + A+ F
Sbjct: 126 NAFVWSLMMSGYFRIGDVHEARAIF---YRVFARDLVIWNTLIAGYAQNGYSDDAIDAF- 181
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ M + DAV++ ++L A A G G++VH G+ + FV N+L+DMYA
Sbjct: 182 --FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 239
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
KCG + A+ VFE + + V N+M++ + G + AL +F M +++ D +++
Sbjct: 240 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 299
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
V+ G E L +F +M++ KPN
Sbjct: 300 VLTACVHGGFLMEGLKIFSEMKTQDVKPN 328
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 36/265 (13%)
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
+V +++I MY KC + AR +FD + +RNV TW AMIGGY +G+A + LF ++
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMP--ERNVATWNAMIGGYMSNGDAVLASGLFEEI- 57
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIH---AYVLRN------------------ 375
SV N T + + + RE+ + L+N
Sbjct: 58 ----SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 113
Query: 376 ---QYDSDV----LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQ 428
++ D+ +V + ++ Y + GD+ AR +F + ++ V W +LI GY +G
Sbjct: 114 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 173
Query: 429 GEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYA 488
++A+ F M+ EG PD +T +L AC+ SG +D G + S ++ G+ +
Sbjct: 174 SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GIELNQFVSN 232
Query: 489 CMVDLLGRAGRLDKAMKLIEGMPMK 513
++D+ + G L+ A + E + ++
Sbjct: 233 ALIDMYAKCGDLENATSVFESISVR 257
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 202/367 (55%), Gaps = 18/367 (4%)
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C L+ + +H + + D L + L++ YS G + A VF+ M KN +
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLD-LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET 322
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W +I + +G GE+A+ +F ++EG +PDG F + YAC G VDEG+ +F MS
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
++YG+ P E Y +V++ G LD+A++ +E MPM+P VW L++ R H N++LG
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 536 EFAAN--KLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGK 593
++ A + L+ N S + A+ DV + SL K +GI + G
Sbjct: 443 DYCAEVVEFLDPTRLNKQSREGFIPVKAS-----DVEK-ESLKKRSGI--------LHGV 488
Query: 594 KGT-ATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHS 652
K + F GD P+++ ++ +L L + +GYV ET ALHD+D E K LL HS
Sbjct: 489 KSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHS 548
Query: 653 EKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGS 712
E++A A +L SAP +P + KNLRVC DCH A+ +S I+ E+I RD RFH KNG+
Sbjct: 549 ERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGA 608
Query: 713 CSCRNYW 719
C+C++YW
Sbjct: 609 CTCKDYW 615
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH 177
K VHG S D+ + L++MY+ CG+ +EA+ VFE+M +K++ +W ++ ++
Sbjct: 273 AKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAK 332
Query: 178 IGMFENALTLFEQMREE 194
G E+A+ +F + +EE
Sbjct: 333 NGFGEDAIDMFSRFKEE 349
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 224/422 (53%), Gaps = 38/422 (9%)
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
+V+ ++ +I Y+ G E+L+ F M+S +E T LL C+S+ L GK H
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
I+ + R + + ++++YT + A+ +FD ++ +RNVV W MI G
Sbjct: 126 GELIRT--GFHRLGKIRI----GVVELYTSGGRMGDAQKVFDEMS--ERNVVVWNLMIRG 177
Query: 319 YAQHGEANDSLELFSQMLKQ-----------------------------DRSVKPNAFTI 349
+ G+ L LF QM ++ D+ P+ T+
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 350 SCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK 409
L A L L +G+ IH+ + D + V N L+D Y KSGD++ A +F M+
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 410 HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-LLPDGITFLVMLYACSHSGMVDEGI 468
+N VSW +LI+G ++G+GE + +F+ M +EG + P+ TFL +L CS++G V+ G
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 469 KYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
+ F M + + + EHY MVDL+ R+GR+ +A K ++ MP+ +W +LLS CR
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 529 HENVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
H +VKL E AA +L+++E N G+Y LLSN+YA RW+DV ++R+LMK ++K G S
Sbjct: 418 HGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Query: 589 WV 590
+
Sbjct: 478 TI 479
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 195/393 (49%), Gaps = 24/393 (6%)
Query: 40 CGAL---DHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQ 96
CG+L D+A ++F + + + +N+M+ Y G +L F M I
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNV---LVFNAMIKCYSLVGPPLESLSFFSSMKSR---GIW 99
Query: 97 LDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKV 156
D + +L + +S+ FGK VHG +R+G + +V++Y G M +A KV
Sbjct: 100 ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKV 159
Query: 157 FERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLG 216
F+ M +++VV WN M+ G+ G E L LF+QM E +I VSW+++I+ ++ G
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRD 215
Query: 217 YEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL 276
EAL +F +M P+E T+V++L AS+G L GK H L +D +
Sbjct: 216 REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF-----KDFI 270
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQML 336
V NA++D Y K + A AIF + + RNVV+W +I G A +G+ ++LF M+
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKM--QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Query: 337 KQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL-RNQYDSDVLYVANCLIDTYSKS 395
++ + V PN T L C+ + G E+ ++ R + ++ + ++D S+S
Sbjct: 329 EEGK-VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG-AMVDLMSRS 386
Query: 396 GDIDVARVVFDNMK-HKNAVSWTSLITGYGMHG 427
G I A NM + NA W SL++ HG
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 42/272 (15%)
Query: 289 CKSIS---VARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
C S+S A +F + ++ NV+ + AMI Y+ G +SL FS M + R + +
Sbjct: 46 CGSLSNSDYANRVFSHI--QNPNVLVFNAMIKCYSLVGPPLESLSFFSSM--KSRGIWAD 101
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
+T + L +C+ L+ LR G+ +H ++R + + + +++ Y+ G + A+ VF
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR-LGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 406 DNMKHKNAVSWTSLITGY--------GMH-----------------------GQGEEAVK 434
D M +N V W +I G+ G+H G+ EA++
Sbjct: 161 DEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE 220
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYA-CMVDL 493
+F EM +G PD T + +L + G++D G K+ ++ G+ +VD
Sbjct: 221 LFCEMIDQGFDPDEATVVTVLPISASLGVLDTG-KWIHSTAESSGLFKDFITVGNALVDF 279
Query: 494 LGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
++G L+ A + M + V W L+SG
Sbjct: 280 YCKSGDLEAATAIFRKM-QRRNVVSWNTLISG 310
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 287/582 (49%), Gaps = 62/582 (10%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ + N N + + G L++A +FDEM + D+VSWN+M++ V G + +
Sbjct: 65 IPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPER---DVVSWNTMISGLVSCGFHEYGI 121
Query: 82 GLFQKM--WEMVDVDIQLDAV-SLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGN 138
+F M WE+ + + SLV + G+Q+HG A+ SG+
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVR---------HGEQIHGNAICSGV-------- 164
Query: 139 SLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
+ ++V WN+++ Y +G+F+ AL++F M +
Sbjct: 165 ----------------------SRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR---- 198
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
DVVSW+ +I + G AL+ F M+ +P+E T+ ++S C+ + L GK+
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 259 CYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
IK + +V+ A IDM++KC + + +F + D V +MIG
Sbjct: 259 ALCIKMGFLSNS------IVLGAGIDMFSKCNRLDDSVKLFRELEKWDS--VLCNSMIGS 310
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
Y+ H D+L LF +L +SV+P+ FT S S+++ L G ++H+ V++ +D
Sbjct: 311 YSWHCCGEDALRLF--ILAMTQSVRPDKFTFS-SVLSSMNAVMLDHGADVHSLVIKLGFD 367
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEE 438
D VA L++ Y K+G +D+A VF K+ + W ++I G + + E++ +F +
Sbjct: 368 LDTA-VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQ 426
Query: 439 M-RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
+ + L PD +T + +L AC ++G V+EGI+ FS M K +GV PG EHYAC+++LL R
Sbjct: 427 LLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRV 486
Query: 498 GRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLS 557
G +++A + + +P +P +W +L + +L E A +LE E ++ Y +L
Sbjct: 487 GMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLI 546
Query: 558 NIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATF 599
IY RW++ ++R M +K G S + + +F
Sbjct: 547 KIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 208/447 (46%), Gaps = 24/447 (5%)
Query: 117 FGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
K VH + +G + GN + +Y K G + A ++F+ + K+ ++WN + G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
G NAL LF++M E DVVSW+T+I+G G + VF MQ +P E
Sbjct: 82 KNGYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 237 T--LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISV 294
T +++ L C G IHG C + + L+V N+++DMY +
Sbjct: 138 TFSILASLVTCVRHGEQIHGNAI-CSGVS---------RYNLVVWNSVMDMYRRLGVFDY 187
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
A ++F + +DR+VV+W +I + G +L+ F L ++ ++P+ +T+S +
Sbjct: 188 ALSVF--LTMEDRDVVSWNCLILSCSDSGNKEVALDQF--WLMREMEIQPDEYTVSMVVS 243
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV 414
C+ L L G++ A ++ + S+ + V ID +SK +D + +F ++ ++V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSI-VLGAGIDMFSKCNRLDDSVKLFRELEKWDSV 302
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
S+I Y H GE+A+++F + + PD TF +L + ++ M+D G S +
Sbjct: 303 LCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLV 361
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKL 534
K G ++++ + G +D AM + K + W ++ G ++
Sbjct: 362 IK-LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGK-DLIFWNTVIMGLARNSRAVE 419
Query: 535 GEFAANKLLELESENDGSYTLLSNIYA 561
N+LL +S TL+ + A
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVA 446
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 216/409 (52%), Gaps = 18/409 (4%)
Query: 187 LFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA 246
F +MR ++ D ++ V A K G L +++ H + LLS
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL-----VKTLHC---QALRFGLLSDLF 153
Query: 247 SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD 306
++ LI + +D Q +++ N +ID K + I AR +FDS+ +D
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
+V+W ++I GYAQ ++++LF +M+ +KP+ I +L ACA+ + G+
Sbjct: 214 --LVSWNSLISGYAQMNHCREAIKLFDEMVAL--GLKPDNVAIVSTLSACAQSGDWQKGK 269
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMH 426
IH Y R + D ++A L+D Y+K G ID A +F+ K +W ++ITG MH
Sbjct: 270 AIHDYTKRKRLFIDS-FLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
G GE V F +M G+ PDG+TF+ +L CSHSG+VDE F M Y V +H
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMPMKPGQ----VVWVALLSGCRKHENVKLGEFAANKL 542
Y CM DLLGRAG +++A ++IE MP G + W LL GCR H N+++ E AAN++
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV 448
Query: 543 LELESENDGSYTLLSNIYANARRWKDVTRIRSLM-KHTGIKKRPGCSWV 590
L E+ G Y ++ +YANA RW++V ++R ++ + +KK G S V
Sbjct: 449 KALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 181/375 (48%), Gaps = 24/375 (6%)
Query: 113 GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMV 172
G K +H A+R GL D+F N+L+ +Y+ + A ++F+ ++DVV++N ++
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLI 190
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
G A LF+ M D+VSW+++I+GYAQ EA+ +F +M + K
Sbjct: 191 DGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P+ V +VS LS CA G GK H YT + L D + ++D Y KC I
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS------FLATGLVDFYAKCGFI 300
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
A IF+ + D+ + TW AMI G A HG +++ F +M+ +KP+ T
Sbjct: 301 DTAMEIFELCS--DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS--GIKPDGVTFISV 356
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLIDTYSKSGDIDVARVVFDNM--- 408
L+ C+ + R + +R+ YD + + C+ D ++G I+ A + + M
Sbjct: 357 LVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 409 --KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP-DGITFLVMLYACSHSGMVD 465
+ ++W+ L+ G +HG E A K R + L P DG + VM+ +++ +
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIEIAEKAAN--RVKALSPEDGGVYKVMVEMYANAERWE 473
Query: 466 EGIKYFSCMSKEYGV 480
E +K + ++ V
Sbjct: 474 EVVKVREIIDRDKKV 488
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 123/242 (50%), Gaps = 31/242 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDE----------------------MYKSEIFD 60
L S++F N ++ +Y +D A Q+FDE + E+FD
Sbjct: 148 LLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFD 207
Query: 61 ------LVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGS 114
LVSWNS+++ Y Q + A+ LF EMV + ++ D V++V+ L A A G
Sbjct: 208 SMPLRDLVSWNSLISGYAQMNHCREAIKLFD---EMVALGLKPDNVAIVSTLSACAQSGD 264
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTG 174
W GK +H + R LF D F+ LVD YAKCG + A ++FE K + +WNAM+TG
Sbjct: 265 WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 175 YSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN 234
+ G E + F +M I+ D V++ +V+ G + GL EA N+F QM+S +
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNR 384
Query: 235 EV 236
E+
Sbjct: 385 EM 386
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 253/528 (47%), Gaps = 69/528 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L+ + V N++++ YG+CG A +MF + + +D+VSWN+++ A +S + AL
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQD---AGSWDIVSWNAIICATAKSENPLKALK 302
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF M E Q VS++ V + G+Q+HG +++G + +GN+L+D
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC---GRQIHGMLIKNGCETGIVLGNALID 359
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
YAKC G E++ F+ +R++NI V
Sbjct: 360 FYAKC-------------------------------GNLEDSRLCFDYIRDKNI----VC 384
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL-VSLLSGCASVGALIH------GK 255
W+ +++GYA K G L++F QM +P E T +L S C + +H G
Sbjct: 385 WNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGY 443
Query: 256 ETHCYTIKCILNYDRCDQ---DELLVI------------NAIIDMYTKCKSISVARAIFD 300
E + Y + ++ +Q D LL++ N + +Y++ + +
Sbjct: 444 EDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIS 503
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
++ D V+W I ++ + +ELF ML+ + ++P+ +T L C++L
Sbjct: 504 TLEQPD--TVSWNIAIAACSRSDYHEEVIELFKHMLQSN--IRPDKYTFVSILSLCSKLC 559
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
L G IH + + + +V N LID Y K G I VF+ + KN ++WT+LI
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
+ G+HG G+EA++ F+E G PD ++F+ +L AC H GMV EG+ F M K+YGV
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGV 678
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
P +HY C VDLL R G L +A LI MP VW L GC +
Sbjct: 679 EPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNR 726
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 210/438 (47%), Gaps = 56/438 (12%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
VL V+VCN ++++Y + G + A ++FD+M + + VS+N+++ Y + GD A
Sbjct: 44 VLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPER---NKVSFNTIIKGYSKYGDVDKAW 100
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF-EDVFVGNSL 140
G+F +M + Q S V+ L + AS+ G Q+HG +++ GLF D FVG L
Sbjct: 101 GVFSEMRYFGYLPNQ----STVSGLLSCASLDVRA-GTQLHGLSLKYGLFMADAFVGTCL 155
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ +Y + ++ A +VFE M K + +WN M++ H G +
Sbjct: 156 LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK------------------ 197
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
E + FR++ + E + + +L G + V L K+ HC
Sbjct: 198 -----------------ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
K L+ E+ V+N++I Y KC + +A +F D +V+W A+I A
Sbjct: 241 ATKKGLDC------EISVVNSLISAYGKCGNTHMAERMFQDAGSWD--IVSWNAIICATA 292
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
+ +L+LF M + PN T L + + L GR+IH +++N ++
Sbjct: 293 KSENPLKALKLFVSM--PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETG 350
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
++ + N LID Y+K G+++ +R+ FD ++ KN V W +L++GY + G + +F +M
Sbjct: 351 IV-LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 441 KEGLLPDGITFLVMLYAC 458
+ G P TF L +C
Sbjct: 409 QMGFRPTEYTFSTALKSC 426
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 189/442 (42%), Gaps = 82/442 (18%)
Query: 100 VSLVNVL---PAFASMGSWWFGKQVHGFAVR--SGLFEDVFVGNSLVDMYAKCGMMHEAS 154
VSL+NV P+FA K +H ++ S L + V+V N+++ +Y K G + A
Sbjct: 16 VSLLNVCRKAPSFART------KALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAG 69
Query: 155 KVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKG 214
KVF+ QM E N VS++T+I GY++ G
Sbjct: 70 KVFD-------------------------------QMPERN----KVSFNTIIKGYSKYG 94
Query: 215 LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
+A VF +M+ PN+ T+ LLS CAS+ G + H ++K L
Sbjct: 95 DVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLF-----MA 147
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQ 334
+ V ++ +Y + + +A +F+ + K ++ TW M+ G + + F +
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK--SLETWNHMMSLLGHRGFLKECMFFFRE 205
Query: 335 MLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSK 394
+++ S+ ++F ++C + L +++H + D ++ V N LI Y K
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVK--DLDISKQLHCSATKKGLDCEI-SVVNSLISAYGK 262
Query: 395 SGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD------- 447
G+ +A +F + + VSW ++I +A+K+F M + G P+
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 448 -GITFLVMLYACS---HSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
G++ LV L +C H ++ G E G++ G ++D + G L+ +
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGC--------ETGIVLGNA----LIDFYAKCGNLEDS 370
Query: 504 MKLIEGMPMKPGQVVWVALLSG 525
+L V W ALLSG
Sbjct: 371 -RLCFDYIRDKNIVCWNALLSG 391
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 22/299 (7%)
Query: 238 LVSLLSGCASVGALIHGKETHCYTIKCILNYDRCD--QDELLVINAIIDMYTKCKSISVA 295
+VSLL+ C + K H +I C + V N II +Y K +S+A
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITL------CSVLLQPVYVCNNIISLYEKLGEVSLA 68
Query: 296 RAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
+FD + +RN V++ +I GY+++G+ + + +FS+M + PN T+S L++
Sbjct: 69 GKVFDQMP--ERNKVSFNTIIKGYSKYGDVDKAWGVFSEM--RYFGYLPNQSTVS-GLLS 123
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
CA L +R+G ++H L+ +V CL+ Y + +++A VF++M K+ +
Sbjct: 124 CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 182
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W +++ G G +E + F E+ + G +FL +L S +D K C +
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDIS-KQLHCSA 241
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQ---VVWVALLSGCRKHEN 531
+ G+ ++ G+ G A E M G V W A++ K EN
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMA----ERMFQDAGSWDIVSWNAIICATAKSEN 296
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 220/391 (56%), Gaps = 21/391 (5%)
Query: 210 YAQKGLGYEALNVFRQM--QSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
Y + G +AL FR QS + L ++ A + + G++ H K L
Sbjct: 38 YLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRK--LG 95
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAND 327
++ Q + +++ Y+ + AR +FD P+ +N+V WTAMI Y ++ + +
Sbjct: 96 FNAVIQ----IQTSLVGFYSSVGDVDYARQVFDE-TPEKQNIVLWTAMISAYTENENSVE 150
Query: 328 SLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAY-VLRNQYDSDVLYVAN 386
++ELF +M + ++ + ++ +L ACA L A++ G EI++ + R + + L + N
Sbjct: 151 AIELFKRM--EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRN 208
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRK----- 441
L++ Y KSG+ + AR +FD K+ ++TS+I GY ++GQ +E++++F++M+
Sbjct: 209 SLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQ 268
Query: 442 -EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
+ P+ +TF+ +L ACSHSG+V+EG ++F M +Y + P E H+ CMVDL R+G L
Sbjct: 269 DTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHL 328
Query: 501 DKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
A + I MP+KP V+W LL C H NV+LGE ++ EL+ ++ G Y LSNIY
Sbjct: 329 KDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIY 388
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQ 591
A+ W + +++R ++ ++ PG SW++
Sbjct: 389 ASKGMWDEKSKMRDRVRK---RRMPGKSWIE 416
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 172/384 (44%), Gaps = 54/384 (14%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N + Y++SG+ AL F+ + + +V L + + A S G+Q+H
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSV-LFAIKVSSAQKASSLDGRQIHAL 90
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF-ERMQKKDVVSWNAMVTGYSHIGMFEN 183
+ G + + SLV Y+ G + A +VF E +K+++V W AM++ Y+
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLS 243
A+ LF++M E IELD V + LS
Sbjct: 151 AIELFKRMEAEKIELD-----------------------------------GVIVTVALS 175
Query: 244 GCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVA 303
CA +GA+ G+E + +IK R D L + N++++MY K AR +FD
Sbjct: 176 ACADLGAVQMGEEIYSRSIK---RKRRLAMD-LTLRNSLLNMYVKSGETEKARKLFDESM 231
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQM----LKQDRSVKPNAFTISCSLMACARL 359
KD V T+T+MI GYA +G+A +SLELF +M QD + PN T LMAC+
Sbjct: 232 RKD--VTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 360 AALRSG-REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-NAVSWT 417
+ G R + ++ + C++D + +SG + A + M K N V W
Sbjct: 290 GLVEEGKRHFKSMIMDYNLKPREAHFG-CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 418 SLITGYGMHGQ---GEEAV-KVFE 437
+L+ +HG GEE ++FE
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFE 372
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 159/320 (49%), Gaps = 42/320 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
N+ + + ++V Y G +D+ARQ+FDE + + ++V W +M++AY ++ ++ A+
Sbjct: 96 FNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQ--NIVLWTAMISAYTENENSVEAIE 153
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSG--LFEDVFVGNSL 140
LF++M I+LD V + L A A +G+ G++++ +++ L D+ + NSL
Sbjct: 154 LFKRMEAE---KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
++MY K G +A K+F+ +KDV ++ +M+ GY+ G + +L LF++M+ + D
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD- 269
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
TVI PN+VT + +L C+ G + GK H
Sbjct: 270 ----TVIT------------------------PNDVTFIGVLMACSHSGLVEEGKR-HFK 300
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
++ I++Y+ ++ ++D++ + + A + + P N V W ++G +
Sbjct: 301 SM--IMDYNLKPREAHF--GCMVDLFCRSGHLKDAHEFINQM-PIKPNTVIWRTLLGACS 355
Query: 321 QHGEANDSLELFSQMLKQDR 340
HG E+ ++ + DR
Sbjct: 356 LHGNVELGEEVQRRIFELDR 375
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 196/364 (53%), Gaps = 17/364 (4%)
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C AL+ + +H ++ + SD+ N +I+ YS G ++ A VF++M +N +
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDI-SAYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W +I + +GQGE+A+ F ++EG PDG F + +AC G ++EG+ +F M
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
KEYG+IP EHY +V +L G LD+A++ +E M +P +W L++ R H ++ LG
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG 367
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
+ + + +L++ S + ++ + L+K + G ++ G
Sbjct: 368 DRCQDMVEQLDA---------SRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----G 413
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKL 655
GD + P++ +Y L L + + +GYVP + ALHDVD E K + LF+H+E+
Sbjct: 414 IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERF 473
Query: 656 ALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
A L + IR+ KNLRVC DCH A+ +S I+ E+I RD+ RFHH K+G CSC
Sbjct: 474 AFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533
Query: 716 RNYW 719
R YW
Sbjct: 534 REYW 537
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
C AL K H + + D + N+II+MY+ C S+ A +F+S+
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISD------ISAYNSIIEMYSGCGSVEDALTVFNSMP- 243
Query: 305 KDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
+RN+ TW +I +A++G+ D+++ FS+ KQ+ + KP+ AC L +
Sbjct: 244 -ERNLETWCGVIRCFAKNGQGEDAIDTFSR-FKQEGN-KPDGEMFKEIFFACGVLGDMNE 300
Query: 365 GREIHAYVLRNQYDSDVL---YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLIT 421
G +H + +Y YV+ L+ ++ G +D A ++M+ N W +L+
Sbjct: 301 GL-LHFESMYKEYGIIPCMEHYVS--LVKMLAEPGYLDEALRFVESME-PNVDLWETLMN 356
Query: 422 GYGMHGQ---GEEAVKVFEEM--------RKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
+HG G+ + E++ K GL+P + LV + + GI+Y
Sbjct: 357 LSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRY 416
Query: 471 FS 472
+
Sbjct: 417 MA 418
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
D+ ++N+++ YS G E+ALT+F M E N+E +W VI +A+ G G +A++ F
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLE----TWCGVIRCFAKNGQGEDAIDTF 270
Query: 224 RQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
+ + +KP+ + C +G + G
Sbjct: 271 SRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 227/436 (52%), Gaps = 58/436 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N+ V +++V Y +CG L A + FD M E D++SW ++++A + G A+G+F
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMM---EEKDVISWTAVISACSRKGHGIKAIGMFI 273
Query: 86 KM---WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
M W + + ++ ++L A + + FG+QVH V+ + DVFVG SL+D
Sbjct: 274 GMLNHWFLPN------EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG + + KVF+ M ++ V+
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVT----------------------------------- 352
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+++IA +A++G G EA+++FR M+ H N +T+VS+L C SVGAL+ GKE H I
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K + + + + + ++ +Y KC A + + +D VV+WTAMI G +
Sbjct: 413 KNSI------EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD--VVSWTAMISGCSSL 464
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G +++L+ +M+++ V+PN FT S +L ACA +L GR IH+ +N S+V
Sbjct: 465 GHESEALDFLKEMIQE--GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV- 521
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+V + LI Y+K G + A VFD+M KN VSW ++I GY +G EA+K+ M E
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Query: 443 GLLPDGITFLVMLYAC 458
G D F +L C
Sbjct: 582 GFEVDDYIFATILSTC 597
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 251/503 (49%), Gaps = 62/503 (12%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
++ N +++ R G L +AR++FD M + + V+W +M+ Y++ G A LF+
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEK---NTVTWTAMIDGYLKYGLEDEAFALFE- 172
Query: 87 MWEMVDVDIQL-DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+ V I+ + V +L + + G+QVHG V+ G+ ++ V +SLV YA
Sbjct: 173 --DYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYA 229
Query: 146 KCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+CG + +AL F+ M E+ DV+SW+
Sbjct: 230 QCGEL-------------------------------TSALRAFDMMEEK----DVISWTA 254
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
VI+ ++KG G +A+ +F M + PNE T+ S+L C+ AL G++ H +K +
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ D + V +++DMY KC IS R +FD ++ +RN VTWT++I +A+ G
Sbjct: 315 IKTD------VFVGTSLMDMYAKCGEISDCRKVFDGMS--NRNTVTWTSIIAAHAREGFG 366
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+++ LF M + R + N T+ L AC + AL G+E+HA +++N + +V Y+
Sbjct: 367 EEAISLFRIM--KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV-YIG 423
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
+ L+ Y K G+ A V + ++ VSWT++I+G G EA+ +EM +EG+
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG---VIPGEEHYACMVDLLGRAGRLDK 502
P+ T+ L AC++S + G S K + V G + ++ + + G + +
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG----SALIHMYAKCGFVSE 539
Query: 503 AMKLIEGMPMKPGQVVWVALLSG 525
A ++ + MP K V W A++ G
Sbjct: 540 AFRVFDSMPEK-NLVSWKAMIMG 561
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 166/314 (52%), Gaps = 49/314 (15%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
++ ++VFV +++ MY +CG + R++FD M + V+W S++AA+ + G + A+
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR---NTVTWTSIIAAHAREGFGEEAI 370
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF+ M + + +++V++L A S+G+ GK++H +++ + ++V++G++LV
Sbjct: 371 SLFRIMKRR---HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+Y KCG +A V +++ +DVVSW AM++G S +G AL ++M +E +E
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE---- 483
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
PN T S L CA+ +L+ G+ H
Sbjct: 484 -------------------------------PNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
K N+ + + V +A+I MY KC +S A +FDS+ K N+V+W AMI GYA+
Sbjct: 513 KK---NHALSN---VFVGSALIHMYAKCGFVSEAFRVFDSMPEK--NLVSWKAMIMGYAR 564
Query: 322 HGEANDSLELFSQM 335
+G ++L+L +M
Sbjct: 565 NGFCREALKLMYRM 578
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
+ NV++ + +V +Y +CG +R F+ + + D+VSW +M++ G AL
Sbjct: 416 IEKNVYIGSTLVWLYCKCG---ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
+ EM+ ++ + + + L A A+ S G+ +H A ++ +VFVG++L+
Sbjct: 473 FLK---EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
MYAKCG + EA +VF+ M +K++VSW AM+ GY+ G AL L +M E E+D
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 203 WSTVIA 208
++T+++
Sbjct: 590 FATILS 595
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLI 420
+R + IHA L+ +D V+Y N LI + + GD+ AR VFD+M KN V+WT++I
Sbjct: 97 GMRLIKRIHAMALKC-FDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGL-LPDGITFLVMLYACSHSGMVDEGIKYFSCMSK-EY 478
GY +G +EA +FE+ K G+ + F+ +L CS + G + M K
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGC-RKHENVK 533
G + E + +V + G L A++ + M K + W A++S C RK +K
Sbjct: 216 GNLIVE---SSLVYFYAQCGELTSALRAFDMMEEKD-VISWTAVISACSRKGHGIK 267
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 282/577 (48%), Gaps = 63/577 (10%)
Query: 63 SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVH 122
SW+++V A + G ++G+ + E+++ + DA LV++L + G +Q+H
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 123 GFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFE 182
G+ + G + + NSL+ Y + +A KVF+ M DV+SWN++V+GY G F+
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 183 NALTLFEQMREENIELDVVSWSTVIAG--------------------------------- 209
+ LF ++ ++ + S++ +A
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 210 ---YAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
Y + G +A+ VF+ M+ + + V+ ++++ C+ G L G +
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELG----------LW 244
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
+ + + + N +ID + K + A + + + N +W ++ GY ++
Sbjct: 245 FFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP--NPNSSSWNTILTGYVNSEKSG 302
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++ E F++M V+ + +++S L A A LA + G IHA + DS V+ VA+
Sbjct: 303 EATEFFTKM--HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVV-VAS 359
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL- 445
LID YSK G + A ++F M KN + W +I+GY +G EA+K+F ++++E L
Sbjct: 360 ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLK 419
Query: 446 PDGITFLVMLYACSHSGMVDE-GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
PD TFL +L CSH + E + YF M EY + P EH ++ +G+ G + +A
Sbjct: 420 PDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAK 479
Query: 505 KLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLEL--ESENDGSYTLLSNIYAN 562
++I+ V W ALL C +++K + A K++EL +++ Y ++SN+YA
Sbjct: 480 QVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAY 539
Query: 563 ARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATF 599
RW++V +IR +M+ +G+ K G SW+ + +++
Sbjct: 540 HERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 218/463 (47%), Gaps = 76/463 (16%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
SN + N+++ Y +L+ A ++FDEM D++SWNS+V+ YVQSG + + LF
Sbjct: 88 SNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP---DVISWNSLVSGYVQSGRFQEGICLF 144
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVDM 143
E+ D+ + S L A A + G +H V+ GL + +V VGN L+DM
Sbjct: 145 L---ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI----EL- 198
Y KCG M +A VF+ M++KD VSWNA+V S G E L F QM + EL
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELI 261
Query: 199 ----------------------DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEV 236
+ SW+T++ GY EA F +M S + +E
Sbjct: 262 DAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEY 321
Query: 237 TLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
+L +L+ A++ + G H K L+ ++V +A+IDMY+KC + A
Sbjct: 322 SLSIVLAAVAALAVVPWGSLIHACAHKLGLD------SRVVVASALIDMYSKCGMLKHAE 375
Query: 297 AIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC 356
+F ++ K N++ W MI GYA++G++ ++++LF+Q LKQ+R +KP+ FT L C
Sbjct: 376 LMFWTMPRK--NLIVWNEMISGYARNGDSIEAIKLFNQ-LKQERFLKPDRFTFLNLLAVC 432
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSW 416
+ E+ V+ ++ +I+ Y ++
Sbjct: 433 SHC-------EVPMEVMLGYFE--------MMINEYRIKPSVEHC--------------- 462
Query: 417 TSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACS 459
SLI G G+ +A +V +E G DG+ + +L ACS
Sbjct: 463 CSLIRAMGQRGEVWQAKQVIQEF---GFGYDGVAWRALLGACS 502
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 9 PWQFCSCCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMV 68
PW C L+S V V +A++ MY +CG L HA MF M + +L+ WN M+
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK---NLIVWNEMI 393
Query: 69 AAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVL 106
+ Y ++GD+ A+ LF ++ + + ++ D + +N+L
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQ--ERFLKPDRFTFLNLL 429
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 206/394 (52%), Gaps = 38/394 (9%)
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
D++EL D+ P+ +CA L +L +++H + L++++ D + N
Sbjct: 223 DAIELL------DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP-KLNN 275
Query: 387 CLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
+I + + I A+ VFD+M K+ SW ++ Y +G G++A+ +FEEM K GL P
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
+ TFL + AC+ G ++E +F M E+G+ P EHY ++ +LG+ G L +A +
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 507 IEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNI-YANARR 565
I +P +P W A+ + R H ++ L ++ + EL + D S +++ I +
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDY----MEELMVDVDPSKAVINKIPTPPPKS 451
Query: 566 WKDVTRIRSLMKHTGIKKRPGCSWVQGKKGTATFFVGDRTHPQSERMYAILTELIQRIKV 625
+K+ + S + + TF+ + E+ + V
Sbjct: 452 FKETNMVTSKSRILEFR-------------NLTFYKDE------------AKEMAAKKGV 486
Query: 626 LGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTA 685
+ YVP+T F LHD+D E K L HSE+LA+AYGI+ + P + + I KNLRVCGDCH
Sbjct: 487 V-YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNF 545
Query: 686 ISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
I +S II +I+RD+ RFHHFK+G CSC +YW
Sbjct: 546 IKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
L++ E++D D V + + A++ S K+VH ++S D + N ++
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
M+ +C + +A +VF+ M KD+ SW+ M+ YS GM ++AL LFE+M + ++ + +
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHS-KPNEVTLVSLLSGCASVGALIHGKE 256
+ TV A G EA F M++ H P + +L G L+ ++
Sbjct: 340 FLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P+ V L CA++ +L H K+ H + ++ D + N +I M+ +C SI
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP------KLNNMVISMFGECSSI 287
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+ A+ +FD + D+++ +W M+ Y+ +G +D+L LF +M K +KPN T
Sbjct: 288 TDAKRVFDHMV--DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH--GLKPNEETFLTV 343
Query: 353 LMACARLAALRSGREIHAYVLRNQY 377
+ACA + + +H ++N++
Sbjct: 344 FLACATVGGIEEAF-LHFDSMKNEH 367
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 209/418 (50%), Gaps = 39/418 (9%)
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++T+I Y G +L +F M + H +PN +T SL+ S ++ +G H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK------------DRN-- 308
K +D V + + Y + + +R +FD + RN
Sbjct: 114 KRGFLWDP------FVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 309 ---------------VVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV-KPNAFTISCS 352
VV+WT +I G+++ G +L +F +M++ +R+V PN T
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 353 LMACARL--AALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
L +CA +R G++IH YV+ + L+D Y K+GD+++A +FD ++
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTA-LLDMYGKAGDLEMALTIFDQIRD 286
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
K +W ++I+ +G+ ++A+++FE M+ + P+GIT L +L AC+ S +VD GI+
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHE 530
FS + EY +IP EHY C+VDL+GRAG L A I+ +P +P V ALL C+ HE
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
Query: 531 NVKLGEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCS 588
N +LG +L+ L+ ++ G Y LS A W + ++R M GI+K P S
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 171/339 (50%), Gaps = 24/339 (7%)
Query: 64 WNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHG 123
+N+++ +Y+ +G+ K++L LF M+ +Q + ++ +++ A S S +G +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFT---HMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHG 110
Query: 124 FAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFEN 183
A++ G D FV S V Y + G + + K+F+ + VV+ N+++ G +
Sbjct: 111 QALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDY 170
Query: 184 ALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM---QSCHSKPNEVTLVS 240
A F++M DVVSW+TVI G+++KGL +AL VF +M + PNE T VS
Sbjct: 171 AFEYFQRMPVT----DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 241 LLSGCASV--GALIHGKETHCYTI-KCILNYDRCDQDELLVINAIIDMYTKCKSISVARA 297
+LS CA+ G + GK+ H Y + K I+ + A++DMY K + +A
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIIL-------TTTLGTALLDMYGKAGDLEMALT 279
Query: 298 IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
IFD + +D+ V W A+I A +G +LE+F M + V PN T+ L ACA
Sbjct: 280 IFDQI--RDKKVCAWNAIISALASNGRPKQALEMFEMM--KSSYVHPNGITLLAILTACA 335
Query: 358 RLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG 396
R + G ++ + + C++D ++G
Sbjct: 336 RSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAG 374
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+LN V CN+++ GR G +D+A + F M + D+VSW +++ + + G AL
Sbjct: 147 ILNPCVVACNSLLDACGRNGEMDYAFEYFQRM---PVTDVVSWTTVINGFSKKGLHAKAL 203
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASM--GSWWFGKQVHGFAVRSGLFEDVFVGNS 139
+F +M + I + + V+VL + A+ G GKQ+HG+ + + +G +
Sbjct: 204 MVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTA 263
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+DMY K G + A +F++++ K V +WNA+++ + G + AL +FE M+ + +
Sbjct: 264 LLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPN 323
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
++ ++ A+ L + +F + S
Sbjct: 324 GITLLAILTACARSKLVDLGIQLFSSICS 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 43/261 (16%)
Query: 302 VAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAA 361
VA + + + +I Y GE SL LF+ ML V+PN T + A +
Sbjct: 44 VASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASH--VQPNNLTFPSLIKAACSSFS 101
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDN-------------- 407
+ G +H L+ + D +V + Y + GD++ +R +FD+
Sbjct: 102 VSYGVALHGQALKRGFLWDP-FVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLD 160
Query: 408 -----------------MKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM---RKEGLLPD 447
M + VSWT++I G+ G +A+ VF EM + + P+
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPN 220
Query: 448 GITFLVMLYACSH--SGMVDEGIKYFS-CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAM 504
TF+ +L +C++ G + G + MSKE +I ++D+ G+AG L+ A+
Sbjct: 221 EATFVSVLSSCANFDQGGIRLGKQIHGYVMSKE--IILTTTLGTALLDMYGKAGDLEMAL 278
Query: 505 KLIEGMPMKPGQVVWVALLSG 525
+ + + K W A++S
Sbjct: 279 TIFDQIRDKK-VCAWNAIISA 298
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 181/327 (55%), Gaps = 15/327 (4%)
Query: 277 LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE-----ANDSLEL 331
L+ ++ Y K + AR +FD + +R VTW AMIGGY H + A ++ L
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMP--ERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 332 FSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV-LYVANCLID 390
F + V+P T+ C L A ++ L G +H Y+ + + +V +++ L+D
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 391 TYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGIT 450
YSK G ++ A VF+ MK KN +WTS+ TG ++G+G E + M + G+ P+ IT
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 451 FLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
F +L A H G+V+EGI+ F M +GV P EHY C+VDLLG+AGR+ +A + I M
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 511 PMKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESEND---GS----YTLLSNIYANA 563
P+KP ++ +L + C + +GE LLE+E E++ GS Y LSN+ A+
Sbjct: 386 PIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHK 445
Query: 564 RRWKDVTRIRSLMKHTGIKKRPGCSWV 590
+W +V ++R MK IK RPG S+V
Sbjct: 446 GKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 48/286 (16%)
Query: 28 FVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGD-----TKSALG 82
+ ++ Y + G L +AR++FDEM + V+WN+M+ Y D + A+
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPER---TSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE--DVFVGNSL 140
LF++ + ++ ++V VL A + G G VHG+ + G DVF+G +L
Sbjct: 205 LFRR-FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTAL 263
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
VDMY+KCG ++ A VFE M+ K+V +W +M TG + G L +M E I+ +
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHS----------------------------- 231
++++++++ Y GL E + +F+ M++
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 232 ----KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQ 273
KP+ + L SL + C+ G + G+E K +L +R D+
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEEIG----KALLEIEREDE 425
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 153/337 (45%), Gaps = 55/337 (16%)
Query: 118 GKQVHGFAVRSG-LFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYS 176
G+ VHG + G L+E +G +L+ YAK G + A KVF+ M ++ V+
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVT--------- 180
Query: 177 HIGMFENALTLFEQMREENIELDVVSWSTVIAGY-AQKGLG----YEALNVFRQMQSCHS 231
W+ +I GY + K G +A+ +FR+ C S
Sbjct: 181 --------------------------WNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGS 214
Query: 232 --KPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKC 289
+P + T+V +LS + G L G H Y K L + + ++ + A++DMY+KC
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK--LGFT--PEVDVFIGTALVDMYSKC 270
Query: 290 KSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTI 349
++ A ++F+ + K +NV TWT+M G A +G N++ L ++M + +KPN T
Sbjct: 271 GCLNNAFSVFELM--KVKNVFTWTSMATGLALNGRGNETPNLLNRM--AESGIKPNEITF 326
Query: 350 SCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK 409
+ L A + + G E+ + + V+ C++D K+G I A M
Sbjct: 327 TSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Query: 410 HK-NAVSWTSLITGYGMHGQ---GEEAVKVFEEMRKE 442
K +A+ SL ++G+ GEE K E+ +E
Sbjct: 387 IKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSL---MACARLAALRSGREIHAYVLRNQYDSD 380
+ DS+ +F+ + + N T L A +ALR GR +H V + + +
Sbjct: 86 KPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYE 145
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHG-----QGEEAVKV 435
+ L+ Y+K+GD+ AR VFD M + +V+W ++I GY H +A+ +
Sbjct: 146 SELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 436 FEEMR--KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHY--ACMV 491
F G+ P T + +L A S +G+++ G + K G P + + +V
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK-LGFTPEVDVFIGTALV 264
Query: 492 DLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSG 525
D+ + G L+ A + E M +K W ++ +G
Sbjct: 265 DMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATG 297
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 247/508 (48%), Gaps = 84/508 (16%)
Query: 45 HARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVN 104
+ R +FD + +F + NSM + + L L++ + I DA S
Sbjct: 58 YTRLIFDSVTFPNVFVV---NSMFKYFSKMDMANDVLRLYE---QRSRCGIMPDAFSFPV 111
Query: 105 VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK------------------ 146
V+ + FG + G F+D +V N ++DMY K
Sbjct: 112 VIKSAGR-----FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRK 166
Query: 147 -------------CGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
G EA K+F+ M + DVVSW M+TG++ + ENA F++M E
Sbjct: 167 GSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 194 ENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA------- 246
++ VVSW+ +++GYAQ G +AL +F M +PNE T V ++S C+
Sbjct: 227 KS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 247 --SVGALIHGKET--HCYTIKCILN-YDRC--------------DQDELLVINAIIDMYT 287
S+ LI K +C+ +L+ + +C Q L+ NA+I YT
Sbjct: 283 TRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYT 342
Query: 288 KCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAF 347
+ +S AR +FD++ PK RNVV+W ++I GYA +G+A ++E F M+ S KP+
Sbjct: 343 RIGDMSSARQLFDTM-PK-RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS-KPDEV 399
Query: 348 TISCSLMACARLAALRSGREIHAYVLRNQYD-SDVLYVANCLIDTYSKSGDIDVARVVFD 406
T+ L AC +A L G I Y+ +NQ +D Y LI Y++ G++ A+ VFD
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY--RSLIFMYARGGNLWEAKRVFD 457
Query: 407 NMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
MK ++ VS+ +L T + +G G E + + +M+ EG+ PD +T+ +L AC+ +G++ E
Sbjct: 458 EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKE 517
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLL 494
G + F + P +HYACM DLL
Sbjct: 518 GQRIFKSIRN-----PLADHYACM-DLL 539
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 195/358 (54%), Gaps = 26/358 (7%)
Query: 15 CCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQS 74
C L + ++V ++T + + L++AR+ FD M + + VSWN+M++ Y Q+
Sbjct: 186 ACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV---VSWNAMLSGYAQN 242
Query: 75 GDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDV 134
G T+ AL LF +M+ + ++ + + V V+ A + + + + +
Sbjct: 243 GFTEDALRLFN---DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 135 FVGNSLVDMYAKCGMMHEASKVFERM-QKKDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
FV +L+DM+AKC + A ++F + ++++V+WNAM++GY+ IG +A LF+ M +
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 194 ENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPNEVTLVSLLSGCASVGALI 252
N VVSW+++IAGYA G A+ F M SKP+EVT++S+LS C + L
Sbjct: 360 RN----VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 253 HGKETHCYTIKCILNYDRCDQDEL--LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVV 310
G CI++Y R +Q +L ++I MY + ++ A+ +FD + K+R+VV
Sbjct: 416 LG--------DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM--KERDVV 465
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
++ + +A +G+ ++L L S+M +D ++P+ T + L AC R L+ G+ I
Sbjct: 466 SYNTLFTAFAANGDGVETLNLLSKM--KDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 167/450 (37%), Gaps = 147/450 (32%)
Query: 156 VFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
+F+ + +V N+M +S + M + L L+EQ I D S+ VI + G+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDE 275
++AL V L K+ +
Sbjct: 122 LFQAL---------------------------VEKLGFFKDPY----------------- 137
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPK-----------------------------D 306
V N I+DMY K +S+ AR +FD ++ + +
Sbjct: 138 --VRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
Query: 307 RNVVTWT-------------------------------AMIGGYAQHGEANDSLELFSQM 335
+VV+WT AM+ GYAQ+G D+L LF+ M
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 336 LKQDRSVKPNAFTISCSLMACARLAALRSGR----------------------EIHAYVL 373
L+ V+PN T + AC+ A R ++HA
Sbjct: 256 LRL--GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 374 RNQYDSDV---------LYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYG 424
Q + L N +I Y++ GD+ AR +FD M +N VSW SLI GY
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 425 MHGQGEEAVKVFEEMRKEG-LLPDGITFLVMLYACSHSGMVDEG---IKYFSCMSKEYGV 480
+GQ A++ FE+M G PD +T + +L AC H ++ G + Y ++ +
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI----RKNQI 429
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
+ Y ++ + R G L +A ++ + M
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 282 IIDMYTKCKSISV-ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDR 340
II T+ ++ S R IFDSV NV +M +++ AND L L+ Q +
Sbjct: 45 IISCCTRLRAPSYYTRLIFDSVTFP--NVFVVNSMFKYFSKMDMANDVLRLYEQ--RSRC 100
Query: 341 SVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDV 400
+ P+AF+ + + R L A V + + D YV N ++D Y K ++
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDP-YVRNVIMDMYVKHESVES 154
Query: 401 ARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH 460
AR VFD + + W +I+GY G EEA K+F+ M + D +++ VM+ +
Sbjct: 155 ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAK 210
Query: 461 SGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQV 517
++ KYF M ++ V + M+ + G + A++L M ++P +
Sbjct: 211 VKDLENARKYFDRMPEKSVV-----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET 265
Query: 518 VWVALLSGC 526
WV ++S C
Sbjct: 266 TWVIVISAC 274
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 172/288 (59%), Gaps = 4/288 (1%)
Query: 306 DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG 365
+R VV+WT +I GYA+ + +++ LFS+M+ D ++KPN TI L A L L+
Sbjct: 51 NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACD-AIKPNEITILAILPAVWNLGDLKMC 109
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH--KNAVSWTSLITGY 423
+HAYV + + + V N LID Y+K G I A F + + KN VSWT++I+ +
Sbjct: 110 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 169
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG-IKYFSCMSKEYGVIP 482
+HG G+EAV +F++M + GL P+ +T + +L ACSH G+ +E +++F+ M EY + P
Sbjct: 170 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITP 229
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLGEFAANKL 542
+HY C+VD+L R GRL++A K+ +P++ VVW LL C +++ +L E KL
Sbjct: 230 DVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 289
Query: 543 LELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWV 590
+ELE + G Y L+SNI+ R+ D R R M G+ K PG S V
Sbjct: 290 MELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 143/318 (44%), Gaps = 46/318 (14%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
N N ++T G + A ++M + VSW +++ Y + K A+ LF
Sbjct: 22 NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTV---VSWTTIIDGYARVDKPKEAILLFS 78
Query: 86 KMWEMVDVD-IQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-DVFVGNSLVDM 143
+M V D I+ + ++++ +LPA ++G VH + + G D+ V NSL+D
Sbjct: 79 RM---VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 135
Query: 144 YAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
YAKC G ++A F ++ N ++VSW
Sbjct: 136 YAKC-------------------------------GCIQSAFKFFIEI--PNGRKNLVSW 162
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+T+I+ +A G+G EA+++F+ M+ KPN VT++S+L+ C+ G +E
Sbjct: 163 TTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGL---AEEEFLEFFN 219
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
++N + D + ++DM + + A I + P + V W ++G + +
Sbjct: 220 TMVNEYKITPD-VKHYGCLVDMLRRKGRLEEAEKIALEI-PIEEKAVVWRMLLGACSVYD 277
Query: 324 EANDSLELFSQMLKQDRS 341
+A + + ++++ +RS
Sbjct: 278 DAELAERVTRKLMELERS 295
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 195/394 (49%), Gaps = 41/394 (10%)
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
P+ T VSL+S + GK H IK CDQ L V N+++ MYT C ++
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIK-----HGCDQ-VLPVQNSLMHMYTCCGAL 169
Query: 293 SVARAIFDSVAPKD-----------------------------RNVVTWTAMIGGYAQHG 323
+A+ +F + +D +N+++W MI Y
Sbjct: 170 DLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGAN 229
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
S+ LF +M++ + N T+ L AC R A L+ GR +HA ++R +S V+
Sbjct: 230 NPGVSISLFREMVRA--GFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV- 286
Query: 384 VANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG 443
+ LID Y K ++ +AR +FD++ +N V+W +I + +HG+ E +++FE M
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 444 LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
L PD +TF+ +L C+ +G+V +G Y+S M E+ + P H CM +L AG ++A
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 504 MKLIEGMP---MKPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDGSYTLLSNIY 560
+ ++ +P + P W LLS R N LGE A L+E + N Y LL NIY
Sbjct: 407 EEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIY 466
Query: 561 ANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKK 594
+ RW+DV R+R ++K I + PGC V K+
Sbjct: 467 SVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 188/393 (47%), Gaps = 25/393 (6%)
Query: 53 MYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASM 112
+Y+S I L N + AY+ S K ALG + + V VSL++ + +
Sbjct: 76 IYRS-IGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCV 134
Query: 113 GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMV 172
S GK HG A++ G + + V NSL+ MY CG + A K+F + K+D+VSWN+++
Sbjct: 135 DS---GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSII 191
Query: 173 TGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSK 232
G G A LF++M ++NI +SW+ +I+ Y ++++FR+M +
Sbjct: 192 AGMVRNGDVLAAHKLFDEMPDKNI----ISWNIMISAYLGANNPGVSISLFREMVRAGFQ 247
Query: 233 PNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSI 292
NE TLV LL+ C L G+ H I+ LN +++ A+IDMY KCK +
Sbjct: 248 GNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN------SSVVIDTALIDMYGKCKEV 301
Query: 293 SVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+AR IFDS++ RN VTW MI + HG LELF M+ + ++P+ T
Sbjct: 302 GLARRIFDSLS--IRNKVTWNVMILAHCLHGRPEGGLELFEAMI--NGMLRPDEVTFVGV 357
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
L CAR + G+ ++ ++ C+ + YS +G + A N+ ++
Sbjct: 358 LCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
Query: 413 ----AVSWTSLITGYGMHGQ---GEEAVKVFEE 438
+ W +L++ G GE K E
Sbjct: 418 VTPESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM- 87
V N+++ MY CGALD A+++F E+ K D+VSWNS++A V++GD +A LF +M
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKR---DIVSWNSIIAGMVRNGDVLAAHKLFDEMP 211
Query: 88 ------W---------------------EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQ 120
W EMV Q + +LV +L A G+
Sbjct: 212 DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRS 271
Query: 121 VHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGM 180
VH +R+ L V + +L+DMY KC + A ++F+ + ++ V+WN M+ + G
Sbjct: 272 VHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR 331
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM-QSCHSKPN 234
E L LFE M + D V++ V+ G A+ GL + + + M KPN
Sbjct: 332 PEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
LNS+V + A++ MYG+C + AR++FD + I + V+WN M+ A+ G + L
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSL---SIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVL-----PAFASMGSWWFGKQVHGFAVRSGLFEDVFVG 137
LF+ M++ ++ D V+ V VL S G ++ V F ++ +
Sbjct: 338 LFEA---MINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA 394
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
N +Y+ G EA + + + +DV + F TL E + + IE
Sbjct: 395 N----LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
Query: 198 LDVVSWS---TVIAGYAQKGLGYEALNVFRQM 226
D +++ ++ Y+ G +E +N R+M
Sbjct: 451 TDPLNYKYYHLLMNIYSVTGR-WEDVNRVREM 481
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 199/426 (46%), Gaps = 73/426 (17%)
Query: 119 KQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHI 178
KQ+H ++ L D + L+ + + G AS VF ++Q +WN M+ S
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 179 GMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
AL LF M M S S+ ++ T
Sbjct: 97 HKPREALLLFILM----------------------------------MISHQSQFDKFTF 122
Query: 239 VSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAI 298
++ C + ++ G + H IK D + N ++D+Y KC R +
Sbjct: 123 PFVIKACLASSSIRLGTQVHGLAIKAGFFND------VFFQNTLMDLYFKCGKPDSGRKV 176
Query: 299 FDSVAPKD-----------------------------RNVVTWTAMIGGYAQHGEANDSL 329
FD + + RNVV+WTAMI Y ++ +++
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
+LF +M D VKPN FTI L A +L +L GR +H Y +N + D ++ LI
Sbjct: 237 QLFRRMQVDD--VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDC-FLGTALI 293
Query: 390 DTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL-PDG 448
D YSK G + AR VFD M+ K+ +W S+IT G+HG GEEA+ +FEEM +E + PD
Sbjct: 294 DMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDA 353
Query: 449 ITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
ITF+ +L AC+++G V +G++YF+ M + YG+ P EH ACM+ LL +A ++KA L+E
Sbjct: 354 ITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Query: 509 GMPMKP 514
M P
Sbjct: 414 SMDSDP 419
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 194/386 (50%), Gaps = 18/386 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALG 82
L ++ + ++++ G +A +F+++ F +WN M+ + + + AL
Sbjct: 48 LTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF---TWNLMIRSLSVNHKPREALL 104
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
LF M M+ Q D + V+ A + S G QVHG A+++G F DVF N+L+D
Sbjct: 105 LFILM--MISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMD 162
Query: 143 MYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
+Y KCG KVF++M + +VSW M+ G ++A +F QM N VVS
Sbjct: 163 LYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN----VVS 218
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
W+ +I Y + EA +FR+MQ KPNE T+V+LL +G+L G+ H Y
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
K D C + A+IDMY+KC S+ AR +FD + + +++ TW +MI H
Sbjct: 279 KNGFVLD-C-----FLGTALIDMYSKCGSLQDARKVFDVM--QGKSLATWNSMITSLGVH 330
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
G ++L LF +M ++ SV+P+A T L ACA ++ G +++ S +
Sbjct: 331 GCGEEALSLFEEMEEE-ASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIR 389
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNM 408
C+I ++ +++ A + ++M
Sbjct: 390 EHNACMIQLLEQALEVEKASNLVESM 415
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
L C++ L K+ H IK L D+ L++ +I + + A +F+
Sbjct: 26 FLRTCSNFSQL---KQIHTKIIKHNLTNDQ------LLVRQLISVSSSFGETQYASLVFN 76
Query: 301 SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLA 360
+ + + TW MI + + + ++L LF M+ +S + + FT + AC +
Sbjct: 77 QL--QSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQS-QFDKFTFPFVIKACLASS 133
Query: 361 ALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSG------------------------ 396
++R G ++H ++ + +DV + N L+D Y K G
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFF-QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTML 192
Query: 397 -------DIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI 449
+D A +VF+ M +N VSWT++IT Y + + +EA ++F M+ + + P+
Sbjct: 193 YGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEF 252
Query: 450 TFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
T + +L A + G + G ++ + + G + ++D+ + G L A K+ +
Sbjct: 253 TIVNLLQASTQLGSLSMG-RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 510 MPMKPGQVVWVALLSGCRKH 529
M K W ++++ H
Sbjct: 312 MQGK-SLATWNSMITSLGVH 330
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 183/371 (49%), Gaps = 31/371 (8%)
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C + AL + R +H ++ DV N +I+ YS +D A VF+ M N+ +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDV-GARNAIIEMYSGCCSVDDALKVFEEMPEWNSGT 187
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
++ + +G GEEA+ +F ++EG P+G F + C+ +G V EG F M
Sbjct: 188 LCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMY 247
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
+EYG++P EHY + +L +G LD+A+ +E MPM+P VW L++ R H +V+LG
Sbjct: 248 REYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELG 307
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
+ A + +L D TR+ + G+ +V+ +
Sbjct: 308 DRCAELVEKL----------------------DATRLDKV-SSAGLVATKASDFVKKEPS 344
Query: 596 T-------ATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLL 648
T +TF D +HPQ +Y L L ++K +GYVP+T + + E + +
Sbjct: 345 TRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQI 404
Query: 649 FDHSEKLALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHF 708
F + E++A+ +L S P I + N+R+ GDCH + +S+I ++I RD+ +H F
Sbjct: 405 FGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLF 464
Query: 709 KNGSCSCRNYW 719
KNG C C N W
Sbjct: 465 KNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 180/364 (49%), Gaps = 16/364 (4%)
Query: 356 CARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS 415
C + AL R +H + D+ + +I+ YS D A VF+ M +N+ +
Sbjct: 122 CGEVEALEEARVVHDCI--TPLDARSYHT---VIEMYSGCRSTDDALNVFNEMPKRNSET 176
Query: 416 WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMS 475
W ++I +G+GE A+ +F +EG PD F + +AC G ++EG+ +F M
Sbjct: 177 WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMY 236
Query: 476 KEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPGQVVWVALLSGCRKHENVKLG 535
++YG++ E Y ++++L G LD+A+ +E M ++P +W L++ C ++LG
Sbjct: 237 RDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELG 296
Query: 536 EFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKKRPGCSWVQGKKG 595
+ A + +L++ + + A A + +++ L I+ P KK
Sbjct: 297 DRFAELIKKLDASRMSKESNAGLVAAKASD-SAMEKLKELRYCQMIRDDP-------KKR 348
Query: 596 TATFFVGDRTHPQSERMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKL 655
F GD +H + + L +Q + + G+VP T V++EEK + L S KL
Sbjct: 349 MHEFRAGDTSHLGTVSAFRSLK--VQMLDI-GFVPATRVCFVTVEEEEKEEQLLFRSNKL 405
Query: 656 ALAYGILTSAPGEPIRITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSC 715
A A+ I+ S P+ + +N+R C D H IS+I +I RD ++H +KNG CSC
Sbjct: 406 AFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSC 465
Query: 716 RNYW 719
++YW
Sbjct: 466 KDYW 469
>AT1G47580.1 | Symbols: | lipoyltransferase, putative |
chr1:17484753-17486387 FORWARD
Length = 416
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 77/109 (70%)
Query: 611 RMYAILTELIQRIKVLGYVPETSFALHDVDDEEKGDLLFDHSEKLALAYGILTSAPGEPI 670
+ Y L L + ++ GYVPET + LHD+D+E K L HSE+LA+A+GI+ + PG I
Sbjct: 308 KAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTI 367
Query: 671 RITKNLRVCGDCHTAISYISMIIQHEIILRDSSRFHHFKNGSCSCRNYW 719
R+ KNLR+CGDCH I +S I EII+RD+ RFHHF++G+CSC +YW
Sbjct: 368 RVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 416
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 223/498 (44%), Gaps = 57/498 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMY-KSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ ++ N++++ Y R G LD A ++ ++M K D+ ++ ++++ + ++G +SA+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F+ EM + + + + + + + G + ++ GL D+ N+L+
Sbjct: 405 SIFE---EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 142 DMYAKCGMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREENIE 197
++ + GM E S VF+ M++ V ++N +++ YS G FE A+T++ +M + +
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
D+ +++TV+A A+ G+ ++ V +M+ KPNE+T SLL A +GKE
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA------NGKEI 575
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAM 315
Y + +++ ++ + +KC + A F + + ++ T +M
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 316 IGGYAQH---GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV 372
+ Y + +AN L+ ++R P+ T + + +R A EI +
Sbjct: 636 VSIYGRRQMVAKANGVLDYM-----KERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 373 LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEA 432
L D+ +S+ ++I Y + + +A
Sbjct: 691 LAKGIKPDI--------------------------------ISYNTVIYAYCRNTRMRDA 718
Query: 433 VKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVD 492
++F EMR G++PD IT+ + + + M +E I M K +G P + Y +VD
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVD 777
Query: 493 LLGRAGRLDKAMKLIEGM 510
+ R D+A +E +
Sbjct: 778 GYCKLNRKDEAKLFVEDL 795
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/571 (22%), Positives = 251/571 (43%), Gaps = 33/571 (5%)
Query: 29 VCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKM 87
V +++M G+ G + A MF+ + + D+ S+ S+++A+ SG + A+ +F+KM
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 88 WEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVR---SGLFEDVFVGNSLVDMY 144
E + ++ +L F MG+ W ++ + G+ D + N+L+
Sbjct: 235 EE---DGCKPTLITYNVILNVFGKMGTPW--NKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ + EA++VFE M+ D V++NA++ Y + A+ + +M +
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V+++++I+ YA+ G+ EA+ + QM +KP+ T +LLSG G + E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV----ESAMS 405
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD--SVAPKDRNVVTWTAMIGG 318
+ + N C + + NA I MY + IFD +V ++VTW ++
Sbjct: 406 IFEEMRNAG-C-KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
+ Q+G ++ +F +M + P T + + A +R + ++ +L
Sbjct: 464 FGQNGMDSEVSGVFKEMKRA--GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITGYGMHGQGEEAVK 434
D L N ++ ++ G + + V M+ N +++ SL+ Y +
Sbjct: 522 PD-LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLL 494
+ EE+ + P + ++ CS ++ E + FS + KE G P MV +
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIY 639
Query: 495 GRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKLGEFAANKLLELESEND- 550
GR + KA +++ M + P + +L+ + + E ++L + D
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 551 GSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
SY + Y R +D +RI S M+++GI
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 244/541 (45%), Gaps = 75/541 (13%)
Query: 30 CNAVVTMYGRCGALDHARQMFDEMYKSEIFD-LVSWNSMVAAYVQSGDTKSALGLFQKMW 88
CN V+ + ++ A +++ M + I ++++N+M+ + ++GD + K+W
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV----DKIW 261
Query: 89 -EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKC 147
EM +I+ V+ ++ F+ G ++ HG RSG + N L++ Y K
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321
Query: 148 GMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
G+ +A V + M + ++N + G ++A L M DVVS+
Sbjct: 322 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSY 377
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK 263
+T++ GY + G EA +F +++ P+ VT +L+ G G L +
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ-------- 429
Query: 264 CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHG 323
+ K + IF +V+T+T ++ G+ ++G
Sbjct: 430 ------------------------RLKEEMTTQLIFP-------DVITYTTLVKGFVKNG 458
Query: 324 EANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLY 383
+ + E++ +ML+ + +KP+ + + + RL +H ++ + + L
Sbjct: 459 NLSMATEVYDEMLR--KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516
Query: 384 VANCLIDTYSKSGD----IDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEM 439
+ N ID K G+ I+ R +F + V++T++I GY +GQ + A +++EM
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 440 RKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGR 499
++ L P IT+ V++Y + +G +++ +Y + M K GV P + ++ + +AG
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGN 635
Query: 500 LDKAMKLI-----EGMPMKPGQVVWVALLS-GC---RKHENVKLGEFAANKLLELESEND 550
+D+A + + EG+P P + + L+S C + E VKL ++L+ E E D
Sbjct: 636 IDEAYRYLCKMEEEGIP--PNKYSYTMLISKNCDFEKWEEVVKL----YKEMLDKEIEPD 689
Query: 551 G 551
G
Sbjct: 690 G 690
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 229/497 (46%), Gaps = 62/497 (12%)
Query: 23 LNSNVFVCNAVV---TMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTK 78
L N+ CN ++ Y ++ AR++FD+M K + ++ ++N +V Y G +
Sbjct: 162 LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 79 SALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGN 138
ALG+ ++M + + + D V+ +L A + G K++ ++GL + N
Sbjct: 222 DALGMLERM--VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 139 SLVDMYAKCGMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREE 194
+LV Y K G + EA ++ E M++ +V+ ++N ++ G + G L L + M+
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 195 NIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
++ DVV+++T+I G + GL EA + QM++ K N+VT S+ L
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT------HNISLKWLCKE 393
Query: 255 KETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTA 314
++ T K + ++DM+ +P ++VT+
Sbjct: 394 EKREAVTRK---------------VKELVDMH--------------GFSP---DIVTYHT 421
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
+I Y + G+ + +LE+ +M + +K N T++ L A + L + +
Sbjct: 422 LIKAYLKVGDLSGALEMMREM--GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 375 NQYDSD-VLYVANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQG 429
+ D V Y LI + + ++ A ++D MK ++ SLI G HG+
Sbjct: 480 RGFIVDEVTY--GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC 489
E A++ F+E+ + GLLPD TF ++ G V++ ++++ S ++ P ++Y C
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN-ESIKHSFKP--DNYTC 594
Query: 490 MVDLLG--RAGRLDKAM 504
+ L G + G +KA+
Sbjct: 595 NILLNGLCKEGMTEKAL 611
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 221/483 (45%), Gaps = 62/483 (12%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
+L +++ ++ + + AL + KM ++ + D V+L ++L F
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKL---GYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGY 175
+ G V G D F N+L+ + EA + +RM K D+V++ +V G
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
G + AL+L ++M + IE VV ++T+I +ALN+F +M + +PN
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR-CDQDELLVINAIIDMYTKCKSISV 294
VT SL I+C+ NY R D LL S +
Sbjct: 292 VTYNSL--------------------IRCLCNYGRWSDASRLL-------------SDMI 318
Query: 295 ARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
R I + NVVT++A+I + + G+ ++ +L+ +M+K RS+ P+ FT S +
Sbjct: 319 ERKI-------NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLIN 369
Query: 355 ACARLAALRSGREIHAYVL-RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-- 411
L + + ++ ++ + + V Y N LI + K+ +D +F M +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTY--NTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 412 --NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
N V++T+LI G+ + + A VF++M +G+LPD +T+ ++L ++G V+ +
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 470 YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM---KPGQVVWVALLSG- 525
F + + + P Y M++ + +AG+++ L + + KP V + ++SG
Sbjct: 488 VFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 526 CRK 528
CRK
Sbjct: 547 CRK 549
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 191/427 (44%), Gaps = 29/427 (6%)
Query: 48 QMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLP 107
QM + Y+ + F ++N+++ + A+ L +M V Q D V+ V+
Sbjct: 176 QMVEMGYQPDSF---TFNTLIHGLFRHNRASEAVALVDRM---VVKGCQPDLVTYGIVVN 229
Query: 108 AFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK---- 163
G + + + V + N+++D +++A +F M K
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
+VV++N+++ + G + +A L M E I +VV++S +I + ++G EA ++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 224 RQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK--CILNYDRCDQDELLVINA 281
+M P+ T SL++G L K I C N ++ N
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYNT 401
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDR--NVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
+I + K K + +F ++ + N VT+T +I G+ Q E +++ +F QM+
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD- 460
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
V P+ T S L + + + Y+ R++ + D+ Y N +I+ K+G ++
Sbjct: 461 -GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI-YTYNIMIEGMCKAGKVE 518
Query: 400 VARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
+F ++ K N V++T++++G+ G EEA +F EM++EG LPD T+ ++
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 456 YACSHSG 462
A G
Sbjct: 579 RAHLRDG 585
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 196/463 (42%), Gaps = 81/463 (17%)
Query: 150 MHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ +A +F M K +V ++ +++ + + F+ ++L EQM+ I ++ ++S
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG--------------------- 244
+I + ++ AL V +M +P+ VTL SLL+G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 245 ----CASVGALIHGKETHCYTIKCILNYDR-----CDQD--------------------- 274
+ LIHG H + + DR C D
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 275 -------------ELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGY 319
+++ N IID K+++ A +F + K NVVT+ ++I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
+G +D+ L S M+ +R + PN T S + A + L +++ +++ D
Sbjct: 302 CNYGRWSDASRLLSDMI--ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKV 435
D+ + + LI+ + +D A+ +F+ M K N V++ +LI G+ + +E +++
Sbjct: 360 DI-FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
F EM + GL+ + +T+ +++ + D F M + GV+P Y+ ++D L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLC 477
Query: 496 RAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKLG 535
G+++ A+ + E + M+P + ++ G K V+ G
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 113/225 (50%), Gaps = 8/225 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F ++++ + LD A+ MF+ M + F ++V++N+++ + ++ +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF++M + V + V+ ++ F + V V G+ D+ + L+
Sbjct: 417 ELFREMSQRGLVG---NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D G + A VFE +Q+ D+ ++N M+ G G E+ LF + + ++
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
+VV+++T+++G+ +KGL EA +FR+M+ P+ T +L+
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
+N NV +A++ + + G L A +++DEM K I D+ +++S++ + A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F+ M + D + V+ ++ F G ++ + GL + +L+
Sbjct: 382 HMFELM---ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ + A VF++M D+++++ ++ G + G E AL +FE ++ +E
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
D+ +++ +I G + G + ++F + KPN VT +++SG
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLF 84
NV N ++ + + +D ++F EM + + + V++ +++ + Q+ + +A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+ +MV + D ++ +L + G V + RS + D++ N +++
Sbjct: 455 K---QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 145 AKCGMMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
K G + + +F + K +VV++ M++G+ G+ E A LF +M+EE D
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+++T+I + + G + + R+M+SC
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCR 601
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/517 (19%), Positives = 214/517 (41%), Gaps = 96/517 (18%)
Query: 30 CNAVVTMYGRCGALDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSALGLFQKMW 88
CN ++ + + G D ++ F +M + V ++N M+ + GD ++A GLF++M
Sbjct: 98 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 157
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
GL D NS++D + K G
Sbjct: 158 --------------------------------------FRGLVPDTVTYNSMIDGFGKVG 179
Query: 149 MMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+ + FE M+ + DV+++NA++ + G L + +M+ ++ +VVS+S
Sbjct: 180 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
T++ + ++G+ +A+ + M+ PNE T SL+ +G L ++
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 299
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV--APKDRNVVTWTAMIGGYAQH 322
+ ++ ++ A+ID + + A +F + A N+ ++ A+I G+ +
Sbjct: 300 GVEWN------VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 353
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
+ +LEL +++ + R +KP+ + L
Sbjct: 354 KNMDRALELLNEL--KGRGIKPDLLLYGTFIWGLCSLEK--------------------- 390
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEE 438
I+ A+VV + MK N++ +T+L+ Y G E + + +E
Sbjct: 391 ---------------IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 435
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M++ + +TF V++ + +V + + YF+ +S ++G+ + M+D L +
Sbjct: 436 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 495
Query: 499 RLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENV 532
+++ A L E M K P + + +L+ G K NV
Sbjct: 496 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 206/505 (40%), Gaps = 75/505 (14%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
VF N ++ + G ++ AR +F+EM ++ + D V++NSM+ + + G + F+
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
EM D+ + D ++ ++ F G G + + +GL +V ++LVD +
Sbjct: 190 ---EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 246
Query: 146 KCGMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
K GMM +A K + M++ +V ++ +++ IG +A L +M + +E +VV
Sbjct: 247 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 306
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG--KETHC 259
+++ +I G EA +F +M + PN AS ALIHG K +
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPN----------LASYNALIHGFVKAKNM 356
Query: 260 YTIKCILN--YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP--KDRNVVTWTAM 315
+LN R + +LL+ I + I A+ + + + N + +T +
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ Y + G + L L +M + D V F + + +L + A N
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS-------KAVDYFN 469
Query: 376 QYDSDVLYVANC-----LIDTYSKSGDIDVARVVFDNMKHKNAV---------------- 414
+ +D AN +ID K ++ A +F+ M K V
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529
Query: 415 -----------------------SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
++TSL+ G Q ++A EEM EG+ PD +
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 589
Query: 452 LVMLYACSHSGMVDEGIKYFSCMSK 476
+ +L G +DE ++ S + K
Sbjct: 590 ISVLKKHYELGCIDEAVELQSYLMK 614
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 236/525 (44%), Gaps = 71/525 (13%)
Query: 44 DHARQMFDEMYKSE-IFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSL 102
D A +F EM +S + LV ++ +A ++ L F K E+ + + +++
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNI 118
Query: 103 VNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ- 161
+ + F F V G ++ G D N+L+ G + EA + +RM
Sbjct: 119 M--INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
Query: 162 ---KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYE 218
+ DVV++N++V G G AL L +M E N++ DV ++ST+I + G
Sbjct: 177 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 219 ALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLV 278
A+++F++M++ K + VT SL+ G G D L+
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW---------------------NDGALL 275
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
+ DM ++ + P NV+T+ ++ + + G+ ++ EL+ +M+
Sbjct: 276 LK---DMVSR------------EIVP---NVITFNVLLDVFVKEGKLQEANELYKEMIT- 316
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
R + PN T + + L + ++RN+ D++ + LI Y +
Sbjct: 317 -RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS-LIKGYCMVKRV 374
Query: 399 DVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
D VF N+ + NAV+++ L+ G+ G+ + A ++F+EM G+LPD +T+ ++
Sbjct: 375 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 434
Query: 455 LYACSHSGMVDEGIKYFSCMSK---EYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP 511
L +G +++ ++ F + K + G++ Y +++ + + G+++ A L +P
Sbjct: 435 LDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLP 490
Query: 512 ---MKPGQVVWVALLSG-CRKHENVKLGEFAANKLLELESENDGS 552
+KP + + ++SG C+K G + +L + E DG+
Sbjct: 491 CKGVKPNVMTYTVMISGLCKK------GSLSEANILLRKMEEDGN 529
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ N+ N ++ Y L A M D M +++ D+V++ S++ Y +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F+ + + + +AV+ ++ F G +++ V G+ DV L+
Sbjct: 379 KVFRNISKR---GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 142 DMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D G + +A ++FE +QK +V + ++ G G E+A LF + + ++
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
+V++++ +I+G +KG EA + R+M+ + PN+ T +L+
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 244/559 (43%), Gaps = 63/559 (11%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
L++++ + N + +G+ G +D A + F E+ + + D V++ SM+ ++ A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F+ + + V + ++ + S G + + G V N ++
Sbjct: 294 EMFEHLEKNRRVPC---TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 142 DMYAKCGMMHEASKVFERMQK---KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
K G + EA KVFE M+K ++ ++N ++ G + A L + M++ +
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL-----IH 253
+V + + ++ + EA +F +M P+E+T SL+ G VG + ++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 254 GK--ETHCYT--------IKCILNYDR---------------CDQDELLVINAIIDMYTK 288
K ++ C T IK N+ R C D L ++N +D K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD-LQLLNTYMDCMFK 529
Query: 289 CKSISVARAIFDSVAPKDRNVV----TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
RA+F+ + K R V +++ +I G + G AN++ ELF M +Q +
Sbjct: 530 AGEPEKGRAMFEEI--KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD----VLYVANCLIDTYSKSGDIDV 400
A+ I + G+ AY L + + + +ID +K +D
Sbjct: 588 RAYNIVID-------GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 401 ARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
A ++F+ K K N V ++SLI G+G G+ +EA + EE+ ++GL P+ T+ +L
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MK 513
A + ++E + F M KE P + Y +++ L + + +KA + M MK
Sbjct: 701 ALVKAEEINEALVCFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 514 PGQVVWVALLSGCRKHENV 532
P + + ++SG K N+
Sbjct: 760 PSTISYTTMISGLAKAGNI 778
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 136/610 (22%), Positives = 259/610 (42%), Gaps = 77/610 (12%)
Query: 31 NAVVTMYGRCGALDHARQM---FDEMYKSEIFDLVS-WNSMVAAYVQSGDTKSALGLFQK 86
+A T+ G A++H+ M F +M + V + +++ + + G SAL L +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 87 MWEM-VDVDIQLDAVSLVNVLPAFASMG----SWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
M +D DI L V + +F +G +W F ++ +GL D S++
Sbjct: 229 MKSSSLDADIVLYNV----CIDSFGKVGKVDMAWKFFHEIEA----NGLKPDEVTYTSMI 280
Query: 142 DMYAKCGMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ K + EA ++FE ++K V ++N M+ GY G F+ A +L E+ R +
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
V++++ ++ + G EAL VF +M+ + PN T L+ G L E
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAM 315
K L + + +N ++D K + + A A+F+ + K + +T+ ++
Sbjct: 400 RDSMQKAGLFPN------VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
I G + G +D+ +++ +ML D + N+ + + G +I+ ++ N
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSD--CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI-N 510
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITG--------- 422
Q S L + N +D K+G+ + R +F+ +K + +A S++ LI G
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 423 -----YGMHGQG---------------------EEAVKVFEEMRKEGLLPDGITFLVMLY 456
Y M QG +A ++ EEM+ +G P +T+ ++
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK--- 513
+ +DE F +K + Y+ ++D G+ GR+D+A ++E + K
Sbjct: 631 GLAKIDRLDEAYMLFE-EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 514 PGQVVWVALLSGCRKHENVKLGEFAANKLLELE-SENDGSYTLLSNIYANARRWKDVTRI 572
P W +LL K E + + EL+ + N +Y +L N R++
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 573 RSLMKHTGIK 582
M+ G+K
Sbjct: 750 WQEMQKQGMK 759
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/539 (20%), Positives = 232/539 (43%), Gaps = 69/539 (12%)
Query: 27 VFVCNAVVTMYGRCGALDHARQMFD-EMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQ 85
+ N ++ YG G D A + + + K I ++++N ++ + G AL +F+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 86 KMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYA 145
+M + ++ + L+++L + + + ++ ++GLF +V N +VD
Sbjct: 368 EMKKDAAPNLSTYNI-LIDMLCRAGKLDTAF---ELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 146 KCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
K + EA +FE M K D +++ +++ G +G ++A ++E+M + + + +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPN-------------------------EV 236
++++I + G + +++ M + + P+ E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 237 TLVSLLSGCASVGALIHG-------KETH--CYTIK---CILNYDRCDQDELLVINAIID 284
+ S LIHG ET+ Y++K C+L + N +ID
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL--------DTRAYNIVID 595
Query: 285 MYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
+ KC ++ A + + + K + VVT+ ++I G A+ +++ LF + + + +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE--AKSKRI 653
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR 402
+ N S + ++ + I +++ + LY N L+D K+ +I+ A
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN-LYTWNSLLDALVKAEEINEAL 712
Query: 403 VVFDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
V F +MK N V++ LI G + +A ++EM+K+G+ P I++ M+
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 459 SHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE-----GMPM 512
+ +G + E F K G +P Y M++ L R A L E G+P+
Sbjct: 773 AKAGNIAEAGALFDRF-KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 199/477 (41%), Gaps = 60/477 (12%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLF 84
N+ N ++ M R G LD A ++ D M K+ +F ++ + N MV +S A +F
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 85 QKM--------------------------------WEMVDVDIQLDAVSLVNVLPAFASM 112
++M +M+D D + +++ +++ F +
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 113 GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSW 168
G G +++ + D+ + N+ +D K G + +FE ++ + D S+
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 169 NAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQS 228
+ ++ G G LF M+E+ LD +++ VI G+ + G +A + +M++
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 229 CHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTK 288
+P VT S++ G A + L Y + R + + +++ +++ID + K
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRL-----DEAYMLFEEAKSKRIELN-VVIYSSLIDGFGK 669
Query: 289 CKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNA 346
I A I + + K N+ TW +++ + E N++L F M ++ PN
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQ 727
Query: 347 FTISCSLMACARLAALRSG----REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVAR 402
T + ++ +E+ ++ S + Y +I +K+G+I A
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMK---PSTISYTT--MISGLAKAGNIAEAG 782
Query: 403 VVFDNMKHKNAVS----WTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
+FD K V + ++I G + +A +FEE R+ GL T +V+L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 176/412 (42%), Gaps = 70/412 (16%)
Query: 138 NSLVDMYAKC---GMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQ 190
N+ ++M C + E V + M+K ++ ++ +S + + LTLF+Q
Sbjct: 134 NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 191 MREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
M+E E V ++T+I G+A++G AL++ +M+S +S+ A
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS-----------------SSLDA 236
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRN 308
++++ N ID + K + +A F + +
Sbjct: 237 ------------------------DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 309 VVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
VT+T+MIG + ++++E+F + K R P + + +M +G+
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV--PCTYAYNTMIMGYG-----SAGKFD 325
Query: 369 HAYVL--RNQYDSDVLYVA--NCLIDTYSKSGDIDVARVVFDNMKH---KNAVSWTSLIT 421
AY L R + + V NC++ K G +D A VF+ MK N ++ LI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV- 480
G+ + A ++ + M+K GL P+ T +M+ S +DE F M +Y V
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM--DYKVC 443
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKH 529
P E + ++D LG+ GR+D A K+ E M + +V+ +L+ H
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 140/635 (22%), Positives = 267/635 (42%), Gaps = 90/635 (14%)
Query: 1 LWRASFLSPWQFCSCCCLV*WVLNSNVF---VCNAVVTMYGRCGALDHARQMFDEMYKSE 57
L R+ LS Q CL+ + S V + N++ + + CG+ D
Sbjct: 123 LVRSGRLSDAQ----SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND------------S 166
Query: 58 IFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWF 117
+FDL ++ YVQ+ + A F + + +DA + + + + +G
Sbjct: 167 VFDL-----LIRTYVQARKLREAHEAFT-LLRSKGFTVSIDACNAL--IGSLVRIGWVEL 218
Query: 118 GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVT 173
V+ RSG+ +V+ N +V+ K G M + ++Q+K D+V++N +++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 174 GYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKP 233
YS G+ E A L M + V +++TVI G + G A VF +M P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 234 NEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD---ELLVINAIIDMYTKCK 290
+ T SLL G ++ ++ D +D +L+ ++++ ++T+
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFS---------DMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 291 SISVARAIFDSV--APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ---------- 338
++ A F+SV A + V +T +I GY + G + ++ L ++ML+Q
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 339 -----------------------DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+R++ P+++T++ + +L L++ E+ +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEE 431
+ DV+ N L+D + K GDID A+ ++ +M K +S++ L+ G E
Sbjct: 510 RIRLDVV-TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 432 AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
A +V++EM + + P + M+ SG +G + M E G +P Y ++
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLI 627
Query: 492 DLLGRAGRLDKAMKLIEGMPMKPGQVV-----WVALLSGCRKHENVKLGEFAANKLLELE 546
R + KA L++ M + G +V + ++L G + +K E K++E
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 547 SENDGS-YTLLSNIYANARRWKDVTRIRSLMKHTG 580
D S YT + N + + + RI M G
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 178/414 (42%), Gaps = 48/414 (11%)
Query: 41 GALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDA 99
G + ++F +M ++ DLV ++SM++ + +SG+ AL F + E + D
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE---AGLIPDN 410
Query: 100 VSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER 159
V ++ + G + ++ G DV N+++ K M+ EA K+F
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 160 MQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
M ++ D + ++ G+ +G +NA+ LF++M+E+ I LDVV+++T++ G+ + G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDE 275
A ++ M S P ++ L++ S G L I + +
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI------SKNIKPT 584
Query: 276 LLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFS 333
+++ N++I Y + + S + + + + + +++ +I G+ + + + L
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 334 QMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYS 393
+M ++ + P+ FT + L H + +NQ
Sbjct: 645 KMEEEQGGLVPDVFTYNSIL---------------HGFCRQNQM---------------- 673
Query: 394 KSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPD 447
K ++ V R + + + + ++T +I G+ EA ++ +EM + G PD
Sbjct: 674 KEAEV-VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 210/474 (44%), Gaps = 66/474 (13%)
Query: 56 SEIFDLVSWNSMVAAY-------VQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPA 108
S + DL W Y + S AL LF M E + +D L+NV+
Sbjct: 25 SRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVI-- 82
Query: 109 FASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK----KD 164
A M + + G+ D++ N L++ + + + AS +M K D
Sbjct: 83 -AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPD 141
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
+V++ +++ G+ E A+++ QM E I+ DVV ++T+I + G AL++F
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID 284
QM++ +P+ V SL++G + G D D LL
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWR-------------------DADSLL------R 236
Query: 285 MYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
TK K + P +V+T+ A+I + + G+ D+ EL+++M++ S+ P
Sbjct: 237 GMTKRK-----------IKP---DVITFNALIDAFVKEGKFLDAEELYNEMIRM--SIAP 280
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQ--YDSDVLYVANCLIDTYSKSGDIDVAR 402
N FT + + + R++ Y++ + + V Y + LI+ + K +D A
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTS--LINGFCKCKKVDDAM 337
Query: 403 VVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYAC 458
+F M K N +++T+LI G+G G+ A +VF M G+ P+ T+ V+L+
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 459 SHSGMVDEGIKYFSCMSKEY--GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
++G V + + F M K GV P Y ++ L G+L+KA+ + E M
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 43/356 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
+ +V + ++ + G +++A +FD+M I D+V + S+V SG + A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L + M + I+ D ++ ++ AF G + ++++ +R + ++F SL+
Sbjct: 233 SLLRGMTKR---KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 142 DMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ + G + EA ++F M+ K DVV++ +++ G+ ++A+ +F +M ++ +
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL--------------- 242
+ ++++T+I G+ Q G A VF M S PN T LL
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 243 ---------SGCA----SVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTK- 288
G A + L+HG + K ++ ++ + E+ + + +
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 289 -CKSISVARAI--FDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
CK+ V A+ F S+ K NVVT+T MI G + G +++ LF +M K+D
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM-KED 524
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 214/486 (44%), Gaps = 48/486 (9%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
L +VF N V+ + L+ A ++ +EM S + LV+W ++ A+ ++G A+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
G ++M M ++ D V +++ F G GK + + G N+L+
Sbjct: 233 GFLKEMKFM---GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 142 DMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ K G + EAS++FE M ++ +V ++ ++ G +G + AL L M E++ E
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG-CA---------- 246
+ V+++ +I + GL +A+ + M+ ++P+ +T LL G CA
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 247 ----------------SVGALIHG--KETHCYTIKCI--LNYDRCDQDELLVINAIIDMY 286
S ALIHG KE + I L ++ + + N +++
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 287 TKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
K ++ A ++ ++ RN T+TAMI G+ + G N + L +M + ++P
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM--RVSELQP 527
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVV 404
+ F +C L + + +L + + R+ DV+ N +ID K+GDI A +
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF-NIMIDGSLKAGDIKSAESL 586
Query: 405 FDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSH 460
M + +++ LI + G +EA+ F++M G PD +L C
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 461 SGMVDE 466
G D+
Sbjct: 647 QGETDK 652
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 213/475 (44%), Gaps = 28/475 (5%)
Query: 65 NSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
N+++A V+S + + A ++KM E D ++ VSL +L + M F V
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLE---TDTFINFVSLSGLLECYVQMRKTGFAFGVLAL 132
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGM 180
++ G +V+ N L+ + +A + M++ DV S+N ++ G+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 181 FENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVS 240
E AL L +M+ +V+W +I + + G EA+ ++M+ + + V S
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 241 LLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD 300
L+ G G L GK + +R D + N +I + K + A IF+
Sbjct: 253 LIRGFCDCGELDRGKALFDEVL------ERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 301 SVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACAR 358
+ + NV T+T +I G G+ ++L+L + M+++D +PNA T + + +
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE--EPNAVTYNIIINKLCK 364
Query: 359 LAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA-RVVFDNMKHK-----N 412
+ EI + + + D + N L+ GD+D A ++++ +K +
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNI-TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
+S+ +LI G + +A+ +++ + ++ D +T ++L + +G V++ ++ +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLS 524
+S + ++ + Y M+D + G L+ A L+ M ++P + LLS
Sbjct: 484 QIS-DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 220/481 (45%), Gaps = 54/481 (11%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSG-DTKSALG 82
+ V+ +A+++ YGR G + A +F+ M + + +LV++N+++ A + G + K
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 83 LFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVD 142
F EM +Q D ++ ++L + G W + + + +DVF N+L+D
Sbjct: 326 FFD---EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 143 MYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIEL 198
K G M A ++ +M K +VVS++ ++ G++ G F+ AL LF +MR I L
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 199 DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETH 258
D VS++T+++ Y + G EAL++ R+M S K + VT +LL G +GK+
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG--------YGKQGK 494
Query: 259 CYTIKCILNYDRCDQ--DELLVINAIIDMYTKCKSISVARAIFDSV--APKDRNVVTWTA 314
+K + + + LL + +ID Y+K A IF A +VV ++A
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL-RSGREIHAYVL 373
+I ++G ++ L +M K+ + PN T + + A R A + RS + L
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKE--GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612
Query: 374 RNQYDSDVLYV-----ANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQ 428
+ S L N +I + + R D + +S
Sbjct: 613 --PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI----------- 659
Query: 429 GEEAVKVFEEMRKEGLLPDGITFLVMLYACSH------SGMVDEGIKYFSCMSKEYGVIP 482
++VF +M + + P+ +TF +L ACS + M+ E ++ F +K YGV+
Sbjct: 660 ----LEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD--NKVYGVVH 713
Query: 483 G 483
G
Sbjct: 714 G 714
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 186/389 (47%), Gaps = 29/389 (7%)
Query: 136 VGNSLVDMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENALTLFEQM 191
+ ++++ + G + A ++FE V +++A+++ Y G+ E A+++F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEAL-NVFRQMQSCHSKPNEVTLVSLLSGCASVGA 250
+E + ++V+++ VI + G+ ++ + F +MQ +P+ +T SLL+ C S G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC-SRGG 353
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RN 308
L + + R +QD + N ++D K + +A I + K N
Sbjct: 354 LWEA----ARNLFDEMTNRRIEQD-VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 309 VVTWTAMIGGYAQHGEANDSLELFSQM----LKQDRSVKPNAFTISCSLMACARLAALRS 364
VV+++ +I G+A+ G +++L LF +M + DR +I + AL
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE--ALDI 466
Query: 365 GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLI 420
RE+ + ++ DV+ N L+ Y K G D + VF MK + N +++++LI
Sbjct: 467 LREMASVGIKK----DVV-TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGV 480
GY G +EA+++F E + GL D + + ++ A +G+V + M+KE G+
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GI 580
Query: 481 IPGEEHYACMVDLLGRAGRLDKAMKLIEG 509
P Y ++D GR+ +D++ G
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSADYSNG 609
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 27/288 (9%)
Query: 313 TAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYV 372
T +I E + ++ + +K++R S + R + + I
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETA 259
Query: 373 LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITGYGMHG- 427
Y + V Y + LI Y +SG + A VF++MK N V++ ++I G G
Sbjct: 260 FAGGYGNTV-YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 428 QGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK---EYGVIPGE 484
+ ++ K F+EM++ G+ PD ITF +L CS G+ + F M+ E V
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF--- 375
Query: 485 EHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKLGEF--AA 539
Y ++D + + G++D A +++ MP+K P V + ++ G K G F A
Sbjct: 376 -SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF-----AKAGRFDEAL 429
Query: 540 NKLLELE----SENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIKK 583
N E+ + + SY L +IY R ++ I M GIKK
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 244/551 (44%), Gaps = 83/551 (15%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N +++ + D + + M I +DL S+N ++ + + AL + KM +
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQV-HGFAVRSGLF-----EDVFVGNSLVDM 143
+ + D V+L ++L + GK++ A+ +F + N+L+
Sbjct: 144 L---GYEPDIVTLSSLL------NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 144 YAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
EA + +RM + D+ ++ +V G G + AL+L ++M + IE D
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
VV ++T+I +ALN+F +M + +PN VT SL
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL------------------ 296
Query: 260 YTIKCILNYDR-CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
I+C+ NY R D LL S + R I + NVVT++A+I
Sbjct: 297 --IRCLCNYGRWSDASRLL-------------SDMIERKI-------NPNVVTFSALIDA 334
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL-RNQY 377
+ + G+ ++ +L+ +M+K RS+ P+ FT S + L + + ++ ++ +
Sbjct: 335 FVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAV 433
+ V Y N LI + K+ ++ +F M + N V++ +LI G G + A
Sbjct: 393 PNVVTY--NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDL 493
K+F++M +G+ PD IT+ ++L G +++ + F + K + P Y M++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEG 509
Query: 494 LGRAGRLDKAMKLIEGMPM---KPGQVVWVALLSG-CRKHENVKLGEFAANKLLELESE- 548
+ +AG+++ L + + KP +++ ++SG CRK L E A E++ +
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG----LKEEADALFREMKEDG 565
Query: 549 ---NDGSYTLL 556
N G+Y L
Sbjct: 566 TLPNSGTYNTL 576
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 201/462 (43%), Gaps = 53/462 (11%)
Query: 107 PAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVV 166
P F+ G ++ + R L +V + L D G M ++ + +V
Sbjct: 31 PLFSLRGVYF---SAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPL------PSIV 81
Query: 167 SWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQM 226
+N +++ + + F+ ++L E+M+ I D+ S++ +I + ++ AL V +M
Sbjct: 82 EFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 227 QSCHSKPNEVTLVSLLSG-------------------------CASVGALIHGKETHCYT 261
+P+ VTL SLL+G + LIHG H
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 262 IKCILNYDR-----CDQDELLVINAIIDMYTKCKSISVARAIFDSV--APKDRNVVTWTA 314
+ + DR C Q +L +++ K I +A ++ + + +VV +T
Sbjct: 202 SEAVALIDRMVARGC-QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
+I + ND+L LF++M ++ ++PN T + + + + ++
Sbjct: 261 IIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGE 430
+ + +V+ + LID + K G + A ++D M + + +++SLI G+ MH + +
Sbjct: 319 RKINPNVVTFS-ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACM 490
EA +FE M + P+ +T+ ++ + V+EG++ F MS+ G++ Y +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTL 436
Query: 491 VDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKH 529
+ L +AG D A K+ + M + P + + LL G K+
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 197/450 (43%), Gaps = 27/450 (6%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLF 84
++ ++++ Y + A + D+M+ E + V++N+++ A+ L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+M V Q D + V+ G + + + DV + +++D
Sbjct: 209 DRM---VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+++A +F M K +VV++N+++ + G + +A L M E I +V
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V++S +I + ++G EA ++ +M P+ T SL++G L K
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 261 TIK--CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR--NVVTWTAMI 316
I C N ++ N +I + K K + +F ++ + N VT+ +I
Sbjct: 386 MISKDCFPN--------VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
G Q G+ + + ++F +M+ V P+ T S L + L + Y+ +++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 377 YDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEA 432
+ D+ Y N +I+ K+G ++ +F ++ K N + +T++I+G+ G EEA
Sbjct: 496 MEPDI-YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 433 VKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+F EM+++G LP+ T+ ++ A G
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 117/225 (52%), Gaps = 8/225 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F ++++ + LD A+ MF+ M + F ++V++N+++ + ++ + +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF++M + V + V+ ++ G +++ V G+ D+ + L+
Sbjct: 416 ELFREMSQRGLVG---NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D K G + +A VFE +QK D+ ++N M+ G G E+ LF + + ++
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
+V+ ++T+I+G+ +KGL EA +FR+M+ + PN T +L+
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 209/458 (45%), Gaps = 52/458 (11%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D+V+ +S++ Y S A+ L +M EM P ++ F
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEM-------------GYKP-----DTFTFTT 193
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIG 179
+HG + + E V +LVD ++ +R + D+V++ +V G G
Sbjct: 194 LIHGLFLHNKASEAV----ALVD------------QMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
+ AL+L ++M + IE DVV ++T+I G + +ALN+F +M + +P+ T
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
SL+S + G I+ +N + ++ +A+ID + K + A ++
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPN------VVTFSALIDAFVKEGKLVEAEKLY 351
Query: 300 DSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACA 357
D + + D ++ T++++I G+ H +++ +F M+ +D PN T S +
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYSTLIKGFC 409
Query: 358 RLAALRSGREI-HAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM----KHKN 412
+ + G E+ R + V Y LI + ++ D D A++VF M H N
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTT--LIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
+++ L+ G +G+ +A+ VFE +++ + PD T+ +M+ +G V++G + F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
+S + GV P Y M+ R G ++A L++ M
Sbjct: 528 NLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 213/483 (44%), Gaps = 84/483 (17%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYK-SEIFDLVSWNSMVAAYVQSGDTKSAL 81
++ N++ N ++ + RC L A + +M K D+V+ NS++ + A+
Sbjct: 714 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 773
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L +M EM + D V+ F +HG + + E V +L+
Sbjct: 774 ALVDQMVEM---GYKPDTVT---------------FTTLIHGLFLHNKASEAV----ALI 811
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
D ++ +R + D+V++ A+V G G + AL L +M IE +VV
Sbjct: 812 D------------RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 859
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+STVI + +ALN+F +M++ +PN +T SL+S
Sbjct: 860 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS------------------ 901
Query: 262 IKCILNYDR-CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYA 320
C+ NY R D LL S + R I + N+VT++A+I +
Sbjct: 902 --CLCNYGRWSDASRLL-------------SDMIERKI-------NPNLVTFSALIDAFV 939
Query: 321 QHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSD 380
+ G+ + +L+ +M+K RS+ PN FT S + L L +++ ++R +
Sbjct: 940 KKGKLVKAEKLYEEMIK--RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 997
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVF 436
V+ N LI+ + K+ +D +F M + N V++T+LI G+ + A VF
Sbjct: 998 VV-TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 1056
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGR 496
++M G+ P+ +T+ ++L +G + + + F + + + P Y M++ + +
Sbjct: 1057 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCK 1115
Query: 497 AGR 499
AG+
Sbjct: 1116 AGK 1118
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 213/480 (44%), Gaps = 79/480 (16%)
Query: 105 VLPAFASM---GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
+P+F ++ G W FA SG + ++ + N L D+ + +A +F M
Sbjct: 26 TVPSFFNLCGSGCWE-----RSFASASGDYREI-LRNRLSDIIK----VDDAVDLFGDMV 75
Query: 162 K----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
K +V +N +++ + + FE ++L EQM+ I D+ ++S I + ++
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSG-CAS------------------------VGALI 252
AL V +M +P+ VTL SLL+G C S LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 253 HGKETHCYTIKCILNYD----RCDQDELLVINAIIDMYTKCKSISVARAIFDSV--APKD 306
HG H + + D R Q +L+ +++ K I +A ++ + +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC---------- 356
+VV + +I G ++ +D+L LF++M ++ ++P+ FT S SL++C
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEM--DNKGIRPDVFTYS-SLISCLCNYGRWSDA 312
Query: 357 ARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----N 412
+RL + R+I+ V+ + LID + K G + A ++D M + +
Sbjct: 313 SRLLSDMIERKINPNVV----------TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 413 AVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFS 472
+++SLI G+ MH + +EA +FE M + P+ +T+ ++ + V+EG++ F
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 473 CMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKH 529
MS+ G++ Y ++ +A D A + + M + P + + LL G K+
Sbjct: 423 EMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/588 (21%), Positives = 254/588 (43%), Gaps = 61/588 (10%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F ++++ + LD A+ MF+ M + F ++V++++++ + ++ + +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF++M + V + V+ ++ F + V V G+ ++ N L+
Sbjct: 419 ELFREMSQRGLVG---NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D K G + +A VFE +Q+ D+ ++N M+ G G E+ LF + + +
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+V++++T+I+G+ +KG EA ++ ++M+ PN T +L+ G +E
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG----DREA 591
Query: 258 HCYTIKCILNYDRCDQDELLVINAII-------DMYTKCKSISVARAIFDSVA---PKDR 307
IK + + + +++ + CK+I + I S + D
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDY 651
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARL----AALR 363
V T + E +D++ LF M Q R P+ S L A A++ +
Sbjct: 652 REVLRTGL-----SDIELDDAIGLFGVM-AQSRPF-PSIIEFSKLLSAIAKMNKFDLVIS 704
Query: 364 SGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSL 419
G ++ + + LY N LI+ + + + +A + M + V+ SL
Sbjct: 705 FGEKMEILGISHN-----LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL 759
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
+ G+ + +AV + ++M + G PD +TF +++ E + M + G
Sbjct: 760 LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-G 818
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLI---EGMPMKPGQVVWVALL-SGCR-KHENVKL 534
P Y +V+ L + G D A+ L+ E ++ V++ ++ S C+ +HE+ L
Sbjct: 819 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 878
Query: 535 GEFAANKLLELESENDG------SYTLLSNIYANARRWKDVTRIRSLM 576
F E EN G +Y+ L + N RW D +R+ S M
Sbjct: 879 NLFT-------EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 919
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 221/514 (42%), Gaps = 86/514 (16%)
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSW----WFGKQVHGFAVRSGLFEDVF 135
A+GLF M + + +L A A M + FG+++ G+ +++
Sbjct: 667 AIGLFGVMAQSRPFP---SIIEFSKLLSAIAKMNKFDLVISFGEKMEIL----GISHNLY 719
Query: 136 VGNSLVDMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQM 191
N L++ + +C + A + +M K D+V+ N+++ G+ H +A+ L +QM
Sbjct: 720 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 779
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
E + D V+++T+I G EA+ + +M +P+ VT GA+
Sbjct: 780 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY----------GAV 829
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVT 311
++G C R D D L +N + M A + NVV
Sbjct: 830 VNG---LC---------KRGDTD--LALNLLNKM---------------EAAKIEANVVI 860
Query: 312 WTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC----------ARLAA 361
++ +I ++ +D+L LF++M +++ V+PN T S SL++C +RL +
Sbjct: 861 YSTVIDSLCKYRHEDDALNLFTEM--ENKGVRPNVITYS-SLISCLCNYGRWSDASRLLS 917
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWT 417
R+I+ L + LID + K G + A +++ M + N +++
Sbjct: 918 DMIERKINPN----------LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 967
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
SLI G+ M + EA ++ E M ++ LP+ +T+ ++ + VD+G++ F MS+
Sbjct: 968 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 1027
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKL 534
G++ Y ++ +A D A + + M + P + + LL G K+ +
Sbjct: 1028 -GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 1086
Query: 535 GEFAANKLLELESEND-GSYTLLSNIYANARRWK 567
L E D +Y ++ A +WK
Sbjct: 1087 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 1120
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 228/513 (44%), Gaps = 61/513 (11%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N +++ + D + ++M + EI L ++N ++ + + AL L KM +
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
+ + V+L ++L + + V G D +L+
Sbjct: 149 L---GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 150 MHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
EA + +RM ++ ++V++ +V G G + AL L +M IE DVV ++T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I + +ALN+F++M++ +PN VT SL+S C+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS--------------------CL 305
Query: 266 LNYDR-CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGE 324
+Y R D +LL DM K + P N+VT+ A+I + + G+
Sbjct: 306 CSYGRWSDASQLLS-----DMIEK------------KINP---NLVTFNALIDAFVKEGK 345
Query: 325 ANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYV 384
++ +L+ M+K RS+ P+ FT + + L +++ +++ DV+
Sbjct: 346 FVEAEKLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV-T 402
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
N LI + KS ++ +F M H+ + V++T+LI G G + A KVF++M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
+G+ PD +T+ ++L ++G +++ ++ F M K + Y M++ + +AG++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKV 521
Query: 501 DKAMKLIEGMPM---KPGQVVWVALLSG-CRKH 529
D L + + KP V + ++SG C K
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 195/463 (42%), Gaps = 84/463 (18%)
Query: 122 HGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSH 177
F+ SG + ++ + N L DM + +A +F M K +V +N +++ +
Sbjct: 44 RAFSSGSGDYREI-LRNGLHDMK-----LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAK 97
Query: 178 IGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
+ F+ ++L E+M+ I + +++ +I + ++ AL + +M +P+ VT
Sbjct: 98 MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 238 LVSLLSG-------------------------CASVGALIHGKETHCYTIKCILNYDRCD 272
L SLL+G + LIHG H + + DR
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 273 Q---------------------DELLVIN------------------AIIDMYTKCKSIS 293
Q D L +N IID K + +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 294 VARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
A +F + K NVVT++++I +G +D+ +L S M+ ++ + PN T +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNA 335
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK 411
+ A + +++ +++ D D+ + N L++ + +D A+ +F+ M K
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDI-FTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 412 ----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
+ V++ +LI G+ + E+ ++F EM GL+ D +T+ ++ H G D
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
K F M + GV P Y+ ++D L G+L+KA+++ + M
Sbjct: 455 QKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 162/340 (47%), Gaps = 19/340 (5%)
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLF 188
DV + N+++D K + +A +F+ M+ K +VV+++++++ G + +A L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
M E+ I ++V+++ +I + ++G EA ++ M P+ T SL++G
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 249 GALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR- 307
L K+ + + C D ++ N +I + K K + +F ++ +
Sbjct: 379 DRLDKAKQMFEFMVS-----KDCFPD-VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 308 -NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
+ VT+T +I G G+ +++ ++F QM+ V P+ T S L L
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITG 422
E+ Y+ +++ D+ Y+ +I+ K+G +D +F ++ K N V++ ++I+G
Sbjct: 491 EVFDYMQKSEIKLDI-YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+EA + ++M+++G LP+ T+ ++ A G
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F N++V + LD A+QMF+ M + F D+V++N+++ + +S +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF+ EM + D V+ ++ G ++V V G+ D+ + L+
Sbjct: 421 ELFR---EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 142 DMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D G + +A +VF+ MQK D+ + M+ G G ++ LF + + ++
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
+VV+++T+I+G K L EA + ++M+ PN T +L+
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 10/231 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
+N N+ NA++ + + G A +++D+M K I D+ ++NS+V + A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA- 384
Query: 82 GLFQKMWE-MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
++M+E MV D D V+ ++ F G ++ GL D +L
Sbjct: 385 ---KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 141 VDMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+ G A KVF++M D+++++ ++ G + G E AL +F+ M++ I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
+LD+ ++T+I G + G + ++F + KPN VT +++SG S
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 206/475 (43%), Gaps = 51/475 (10%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
+L ++N M+ + AL + KM ++ V+L ++L F
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKL---GYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGY 175
+ V G D +LV + EA + ERM K D+V++ A++ G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
G + AL L +M + IE DVV +STVI + +ALN+F +M + +P+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDR-CDQDELL-------------VINA 281
T SL+S C+ NY R D LL N+
Sbjct: 276 FTYSSLIS--------------------CLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 282 IIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
+ID + K + A +FD + + D N+VT+ ++I G+ H +++ ++F+ M+ +D
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
P+ T + + + + G E+ + R + + LI + ++ D D
Sbjct: 376 --CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHGFFQASDCD 432
Query: 400 VARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
A++VF M H N +++ +L+ G +G+ E+A+ VFE ++K + PD T+ +M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 456 YACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
+G V++G F +S + GV P Y M+ + G ++A L M
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 192/413 (46%), Gaps = 22/413 (5%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D V++ ++V Q A+ L ++M V Q D V+ V+ G
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERM---VVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGY 175
+ + + DV + ++++D K + +A +F M K DV +++++++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
+ G + +A L M E I +VV+++++I +A++G EA +F +M PN
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
VT SL++G +H + I ++ C D ++ N +I+ + K K +
Sbjct: 346 VTYNSLINGFC-----MHDRLDEAQQIFTLMVSKDCLPD-VVTYNTLINGFCKAKKVVDG 399
Query: 296 RAIFDSVAPKDR--NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
+F ++ + N VT+T +I G+ Q + +++ +F QM+ V PN T + L
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHPNIMTYNTLL 457
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-- 411
+ L + Y+ +++ + D+ Y N + + K+G ++ +F ++ K
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDI-YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 412 --NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+ +++ ++I+G+ G EEA +F +M+++G LPD T+ ++ A G
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 197/434 (45%), Gaps = 28/434 (6%)
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSW----WFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
EMV V +L A A M + FG+++ V L+ N +++
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY----TYNIMINCL 110
Query: 145 AKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+ + A + +M K +V+ N+++ G+ H A+ L +QM E + D
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V+++T++ G Q EA+ + +M +P+ VT ++++G G+
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-----RGEPDLAL 225
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGG 318
+ + + + D +++ + +ID K + + A +F + K +V T++++I
Sbjct: 226 NLLNKMEKGKIEAD-VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
+G +D+ L S ML +R + PN T + + A A+ L ++ +++ D
Sbjct: 285 LCNYGRWSDASRLLSDML--ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN----AVSWTSLITGYGMHGQGEEAVK 434
+++ N LI+ + +D A+ +F M K+ V++ +LI G+ + + ++
Sbjct: 343 PNIV-TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 435 VFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLL 494
+F +M + GL+ + +T+ +++ + D F M + GV P Y ++D L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGL 460
Query: 495 GRAGRLDKAMKLIE 508
+ G+L+KAM + E
Sbjct: 461 CKNGKLEKAMVVFE 474
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 223/514 (43%), Gaps = 63/514 (12%)
Query: 100 VSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFER 159
V L P+F G ++ G G+ + N+L+ + + EA +F
Sbjct: 8 VHLRKASPSFCLRGIYFSGLSYDGY-------REKLSRNALLHL-----KLDEAVDLFGE 55
Query: 160 MQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGL 215
M K +V ++ +++ + + F+ ++ E+M + ++ +++ +I ++
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 216 GYEALNVFRQMQSCHSKPNEVTLVSLLSG-------------------------CASVGA 250
AL + +M P+ VTL SLL+G +
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 251 LIHGKETHCYTIKCILNYDR-----CDQDELLVINAIIDMYTKCKSISVARAIFDSV--A 303
L+HG H + + +R C Q +L+ A+I+ K +A + + +
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 304 PKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMAC-ARLAAL 362
+ +VV ++ +I ++ +D+L LF++M ++ ++P+ FT S SL++C
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEM--DNKGIRPDVFTYS-SLISCLCNYGRW 291
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTS 418
+ + +L + + +V+ N LID ++K G + A +FD M + N V++ S
Sbjct: 292 SDASRLLSDMLERKINPNVV-TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
LI G+ MH + +EA ++F M + LPD +T+ ++ + V +G++ F MS+
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR- 409
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKLG 535
G++ Y ++ +A D A + + M + P + + LL G K+ ++
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 536 EFAANKLLELESEND-GSYTLLSNIYANARRWKD 568
L + + E D +Y ++S A + +D
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ N+ N+++ + LD A+Q+F M + D+V++N+++ + ++ +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF+ M V + V+ ++ F + V V G+ ++ N+L+
Sbjct: 401 ELFRDMSRRGLVG---NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D K G + +A VFE +QK D+ ++N M G G E+ LF + + ++
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
DV++++T+I+G+ +KGL EA +F +M+ P+ T +L+
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 235/519 (45%), Gaps = 47/519 (9%)
Query: 25 SNVFVCNAVVTMYGRCG---ALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSA 80
++ F+ N ++ + R D R + D M KS + ++ + N ++ + + D +
Sbjct: 131 NDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMC 190
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
L L +K W D+++++ + +L A+ + V+ R G D+F N L
Sbjct: 191 LRLVKK-W-----DLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNML 244
Query: 141 VDMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+D AK +A +VFE M+K +D ++ M+ IG + A+ LF +M E +
Sbjct: 245 LDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIH--- 253
L+VV ++T++ A+ + +A+ VF +M +PNE T LL+ + G L+
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 254 -GKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSV--APKDRNVV 310
+ + Y + I +Y ++ +K +S A +F + P
Sbjct: 362 VVEISKRYMTQGIYSY-------------LVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 311 TWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA 370
++ +M+ G+ +++E+ S++ ++ V + + A +L + ++
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKI--HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 371 YVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMH 426
+ ++ D+ + N LI ++ + G++D A +F+ ++ + +S+ SLI G +
Sbjct: 467 KMKKDGPSPDI-FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 427 GQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH 486
G +EA F+EM+++GL PD +T+ ++ + V+ F M + G P
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVT 584
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVAL 522
Y ++D L + GR +A+ L M + P + + L
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 195/489 (39%), Gaps = 81/489 (16%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKS-EIFDLVSWNSMVAAYVQSGDTKS 79
W L N F ++ Y R A ++ E+ + D+ ++N ++ A + D K+
Sbjct: 197 WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK--DEKA 254
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
Q +M + D + ++ +G + + GL +V N+
Sbjct: 255 C----QVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
L+ + AK M+ +A +VF RM V Y++ + N L Q+ + LD
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRM-----VETGCRPNEYTY-SLLLNLLVAEGQL----VRLD 360
Query: 200 VVS-----------WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
V +S ++ ++ G EA +F M S K + +S+L
Sbjct: 361 GVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 249 GALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD-- 306
G I E +++ + ++ N + K K IS +F+ + KD
Sbjct: 421 GKTIEAIEMLSKI------HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK-KDGP 473
Query: 307 -RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG 365
++ T+ +I + + GE ++++ +F ++ + D KP
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSD--CKP--------------------- 510
Query: 366 REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLIT 421
+I +Y N LI+ K+GD+D A V F M+ K + V++++L+
Sbjct: 511 -DIISY--------------NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI 481
+G + E A +FEEM +G P+ +T+ ++L +G E + +S M K+ G+
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM-KQQGLT 614
Query: 482 PGEEHYACM 490
P Y +
Sbjct: 615 PDSITYTVL 623
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 105/236 (44%), Gaps = 47/236 (19%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKS-EIFDLVSWNSMVAAYVQSGDTKSALGL 83
++ + N V + G+ + H +F++M K D+ ++N ++A++ + G+ A+ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+++ RS D+ NSL++
Sbjct: 500 FEELE--------------------------------------RSDCKPDIISYNSLINC 521
Query: 144 YAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
K G + EA F+ MQ+K DVV+++ ++ + E A +LFE+M + + +
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
+V+++ ++ + G EA++++ +M+ P+ +T L + ++ HGK
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL----ERLQSVSHGK 633
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 234/544 (43%), Gaps = 87/544 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDE-MYKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+ ++ + ++ Y + G L ++F + ++K D+V ++S + YV+SGD +A
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
++++M I + V+ ++ G + ++G ++ G+ + +SL+
Sbjct: 377 VVYKRMLCQ---GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 142 DMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D + KCG + ++E M K DVV + +V G S G+ +A+ +M ++I
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTL-----VSLLSG-------- 244
L+VV ++++I G+ + EAL VFR M KP+ T VS++ G
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 245 ----------------CASVGALI-HGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
C + A H K T + ++ ++ D + V N +I +
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD-IAVCNVVIHLLF 612
Query: 288 KCKSISVARAIFDSV--APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
KC I A F+++ + ++VT+ MI GY +++ +F ++LK PN
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKV-TPFGPN 670
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
T++ LI K+ D+D A +F
Sbjct: 671 TVTLTI------------------------------------LIHVLCKNNDMDGAIRMF 694
Query: 406 DNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
M K NAV++ L+ + E + K+FEEM+++G+ P +++ +++
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVV 518
G VDE F + + ++P YA ++ + GRL +A L E M +KP ++
Sbjct: 755 GRVDEATNIFH-QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 519 WVAL 522
AL
Sbjct: 814 QRAL 817
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 221/528 (41%), Gaps = 47/528 (8%)
Query: 98 DAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVF 157
+ V+ ++ F G + + G+ D+ ++L+D Y K GM+ K+F
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 158 ERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQK 213
+ K DVV +++ + Y G A ++++M + I +VV+++ +I G Q
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 214 GLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYD---- 269
G YEA ++ Q+ +P+ VT SL+ G G L G + IK D
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 270 -------------------------RCDQDELLVINAIIDMYTKCKSISVARAIFD--SV 302
+ + ++V N++ID + + A +F +
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 303 APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
+V T+T ++ G ++L LF +M K ++P+A + A +
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM--GLEPDALAYCTLIDAFCKHMKP 582
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM----KHKNAVSWTS 418
G ++ + RN+ +D+ V N +I K I+ A F+N+ + V++ +
Sbjct: 583 TIGLQLFDLMQRNKISADI-AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I GY + +EA ++FE ++ P+ +T ++++ + +D I+ FS M+ E
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EK 700
Query: 479 GVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKLG 535
G P Y C++D ++ ++ + KL E M K P V + ++ G K V
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 536 EFAANKLLELESEND-GSYTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
++ ++ + D +Y +L Y R + + M G+K
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 203/468 (43%), Gaps = 69/468 (14%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
L N+ N V+ R G + + EM + D V++N+++ Y + G+ AL
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG-SWWFGKQVHGFAVRSGLFEDVFVGNSL 140
+ +M + SL++ + +M + F Q+ VR GL + +L
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR---VR-GLCPNERTYTTL 386
Query: 141 VDMYAKCGMMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
VD +++ G M+EA +V M VV++NA++ G+ G E+A+ + E M+E+ +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE 256
DVVS+STV++G+ + EAL V R+M KP+ +T SL+ G
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF----------- 495
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMI 316
C+Q D+Y + + + P D T+TA+I
Sbjct: 496 --------------CEQRR---TKEACDLYEEMLRVGL---------PPDE--FTYTALI 527
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ 376
Y G+ +L+L ++M+ ++ V P+ T S + + + R + + + +
Sbjct: 528 NAYCMEGDLEKALQLHNEMV--EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 377 -YDSDVLY---VANC----------LIDTYSKSGDIDVARVVFDNMKHKN----AVSWTS 418
SDV Y + NC LI + G + A VF++M KN ++
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
+I G+ G +A +++EM K G L +T + ++ A G V+E
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 220/540 (40%), Gaps = 105/540 (19%)
Query: 8 SPWQFCS--CCCLV*WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVSWN 65
+P QF + C C+ +L A + A D A + D+ Y S +F
Sbjct: 73 NPHQFFTLRCKCITLHILTKFKLYKTAQIL------AEDVAAKTLDDEYASLVF-----K 121
Query: 66 SMVAAYVQSGDTKSALGLFQKMWEMVD-VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGF 124
S+ Y T S L K + + +D L V L Q HGF
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA----------------QAHGF 165
Query: 125 AVRSGLFEDVFVGNSLVDMYAKCGM-MHEASKVFERMQKK----DVVSWNAMVTGYSHIG 179
V N+++D + + A VF+ M + +V ++N ++ G+ G
Sbjct: 166 ------MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 180 MFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLV 239
+ ALTLF++M + +VV+++T+I GY + + + R M +PN ++
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 240 SLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIF 299
+++G G + KE + +N DE+ N +I Y CK + +A+
Sbjct: 280 VVINGLCREGRM---KEVSFVLTE--MNRRGYSLDEV-TYNTLIKGY--CKEGNFHQALV 331
Query: 300 -------DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCS 352
+ P +V+T+T++I + G N ++E QM + R + PN T +
Sbjct: 332 MHAEMLRHGLTP---SVITYTSLIHSMCKAGNMNRAMEFLDQM--RVRGLCPNERTYTT- 385
Query: 353 LMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID----VARVVFDNM 408
L+D +S+ G ++ V R + DN
Sbjct: 386 -----------------------------------LVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
+ V++ +LI G+ + G+ E+A+ V E+M+++GL PD +++ +L S VDE +
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 469 KYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSG 525
+ M E G+ P Y+ ++ R +A L E M + P + + AL++
Sbjct: 471 RVKREMV-EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 222/511 (43%), Gaps = 54/511 (10%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLF 84
++F N +++ + D + ++M + I +L ++N ++ + + AL L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
KM ++ + V+L ++L + + V G D +L+
Sbjct: 144 GKMMKL---GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
EA + +RM ++ ++V++ +V G G + A L +M IE +V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V +STVI + +ALN+F +M++ +PN +T SL+S
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS----------------- 303
Query: 261 TIKCILNYDR-CDQDELL-------------VINAIIDMYTKCKSISVARAIFDSVAPK- 305
C+ NY+R D LL NA+ID + K + A ++D + +
Sbjct: 304 ---CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 306 -DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
D ++ T++++I G+ H +++ +F M+ +D PN T + + + +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYNTLINGFCKAKRIDE 418
Query: 365 GREIHAYV-LRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM----KHKNAVSWTSL 419
G E+ + R + V Y LI + ++ D D A++VF M H N +++ +L
Sbjct: 419 GVELFREMSQRGLVGNTVTYTT--LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
+ G +G+ E+A+ VFE +++ + P T+ +M+ +G V++G F +S + G
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-G 535
Query: 480 VIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
V P Y M+ R G ++A L M
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F ++++ + LD A+ MF+ M + F ++V++N+++ + ++ +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF++M + V + V+ ++ F + V V G+ ++ N+L+
Sbjct: 421 ELFREMSQRGLVG---NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 142 DMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D K G + +A VFE +Q+ + ++N M+ G G E+ LF + + ++
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVT 237
DV+ ++T+I+G+ +KGL EA +FR+M+ P+ T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/555 (18%), Positives = 226/555 (40%), Gaps = 94/555 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSAL 81
+N ++ + + + + G ++ A+ +FD M S + ++ S++ Y + + +
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG- 401
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
++ + EM +I + + V+ S G + + SG +V + +L+
Sbjct: 402 --YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 142 DMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ + +A +V + M+++ D+ +N+++ G S + A + +M E ++
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+ ++ I+GY + A ++M+ C PN+V L++ G +I
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE---- 575
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
+ S R++ D D T+T ++
Sbjct: 576 ---------------------------------ACSAYRSMVDQGILGDAK--TYTVLMN 600
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
G ++ + +D+ E+F +M + + + P+ F+ + ++L ++ I ++
Sbjct: 601 GLFKNDKVDDAEEIFREM--RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITGYGMHGQGEEAV 433
+V+ + N L+ + +SG+I+ A+ + D M H NAV++ ++I GY G EA
Sbjct: 659 TPNVI-IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 434 KVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK----------------- 476
++F+EM+ +GL+PD + ++ C V+ I F K
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 477 EYGVI--------------------PGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MK 513
++G P + Y M+D L + G L+ A +L M +
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 514 PGQVVWVALLSGCRK 528
P + + +LL+G K
Sbjct: 838 PTVITYTSLLNGYDK 852
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 36/293 (12%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSAL 81
L NV + N ++ + R G ++ A+++ DEM K + V++ +++ Y +SGD A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASM--GSWWFGKQVHGFAVRSGLFEDVFVGNS 139
LF +M V +LV+ + FG G A + F N+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF------NA 771
Query: 140 LVDMYAKCGMMHEASKV--------FERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM 191
L++ K G ++V F+R K + V++N M+ G E A LF QM
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
+ N+ V+++++++ GY + G E VF + + +P+ + +++ L
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN-----AFL 886
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK-SISVARAIFDSVA 303
G T + D++ NA+ D CK SIS RA+ A
Sbjct: 887 KEGMTTKALVL----------VDQMFAKNAVDD---GCKLSISTCRALLSGFA 926
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 131/585 (22%), Positives = 243/585 (41%), Gaps = 47/585 (8%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKS 79
+ N +V+ CNA++ + G EM K +I D+ ++N ++ G +
Sbjct: 152 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 211
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
+ L QKM + V+ VL + G + ++ G+ DV N
Sbjct: 212 SSYLMQKMEK---SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 268
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDV----VSWNAMVTGYSHIGMFENALTLFEQMREEN 195
L+ + + + + M+K+ + V++N ++ G+S+ G A L +M
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
+ + V+++ +I G+ +G EAL +F M++ P+EV+ LL G +
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 388
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWT 313
+ + + R + +ID K + A + + ++ D ++VT++
Sbjct: 389 GFYMRMKRNGVCVGR------ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 442
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
A+I G+ + G + E+ ++ + S PN S + C R+ L+ I+ ++
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLS--PNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 500
Query: 374 RNQYDSDVLYVANCLIDTYSKSGDI----DVARVVFDNMKHKNAVSWTSLITGYGMHGQG 429
+ D + N L+ + K+G + + R + + N VS+ LI GYG G+G
Sbjct: 501 LEGHTRD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEH--- 486
+A VF+EM K G P T+ +L G + E K+ K +P
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL----KSLHAVPAAVDTVM 615
Query: 487 YACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSG-CRKHENVKLGEFAANKL 542
Y ++ + ++G L KA+ L M + P + +L+SG CRK + V FA
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK--- 672
Query: 543 LELESENDGS-------YTLLSNIYANARRWKDVTRIRSLMKHTG 580
E+E G+ YT + A +WK R M + G
Sbjct: 673 ---EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 119/561 (21%), Positives = 220/561 (39%), Gaps = 81/561 (14%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N V+ Y + G A ++ D M + D+ ++N ++ +S L + M +
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
+ I + V+ ++ F++ G Q+ + GL + N+L+D + G
Sbjct: 292 RM---IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 150 MHEASKVFERMQKKDV---------------------------------------VSWNA 170
EA K+F M+ K + +++
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 171 MVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
M+ G G + A+ L +M ++ I+ D+V++S +I G+ + G A + ++
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 231 SKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCK 290
PN + +L+ C +G L + Y + + R + N ++ + CK
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCL--KEAIRIYEAMILEGHTR----DHFTFNVLVT--SLCK 520
Query: 291 SISVARA-------IFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVK 343
+ VA A D + P N V++ +I GY GE + +F +M K
Sbjct: 521 AGKVAEAEEFMRCMTSDGILP---NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH--H 575
Query: 344 PNAFTISCSLMACARLAALRSG----REIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
P FT L + LR + +HA + D+ V+Y N L+ KSG++
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHA--VPAAVDT-VMY--NTLLTAMCKSGNLA 630
Query: 400 VARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-LLPDGITFLVM 454
A +F M + ++ ++TSLI+G G+ A+ +E G +LP+ + +
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK- 513
+ +G GI YF G P M+D R G+++K L+ M +
Sbjct: 691 VDGMFKAGQWKAGI-YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 514 --PGQVVWVALLSGCRKHENV 532
P + LL G K ++V
Sbjct: 750 GGPNLTTYNILLHGYSKRKDV 770
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 182/445 (40%), Gaps = 64/445 (14%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMG----SW 115
D V +N+++ A +SG+ A+ LF EMV I D+ + +++ G +
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLF---GEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 116 WFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERM----QKKDVVSWNAM 171
F K+ R + + + VD K G E+M D+V+ NAM
Sbjct: 669 LFAKEAEA---RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 172 VTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHS 231
+ GYS +G E L +M +N ++ +++ ++ GY+++ + ++R +
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 232 KPNEVTLVSLLSG-CAS----VGALI------HGKETHCYTI-----KCILN------YD 269
P+++T SL+ G C S +G I G E YT KC N +D
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 270 ----------RCDQDELLVINAIIDMYTKCKSISVARAIF-----DSVAPKDRNVVTWTA 314
D+D +A++ + + +R + ++P+ R +
Sbjct: 846 LVKVMTSLGISLDKD---TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK---YIG 899
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
+I G + G+ + + +M+ + P S + A A+ + ++L+
Sbjct: 900 LINGLCRVGDIKTAFVVKEEMIAH--KICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVA---RVVFDNMKHK-NAVSWTSLITGYGMHGQGE 430
+ + L+ K+G++ A RVV N K + VS+ LITG G
Sbjct: 958 MKLVPTIASFTT-LMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 431 EAVKVFEEMRKEGLLPDGITFLVML 455
A +++EEM+ +G L + T+ ++
Sbjct: 1017 LAFELYEEMKGDGFLANATTYKALI 1041
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 209/463 (45%), Gaps = 27/463 (5%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
D ++++++V + G A+ L +M EM + D V++ ++ G
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ---RPDLVTVSTLINGLCLKGRVSEAL 195
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGY 175
+ V G D +++ K G A +F +M++++ VV ++ ++
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
G F++AL+LF +M + I+ DVV++S++I G G + + R+M + P+
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
VT +L+ G L+ KE + I R + + N++ID + K + A
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMIT------RGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 296 RAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
+FD + K + ++VT++ +I Y + +D + LF ++ + + PN T + +
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNTITYNTLV 427
Query: 354 MACARLAALRSGREI-HAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN 412
+ + L + +E+ V R S V Y L+D +G+++ A +F+ M+
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTY--GILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 413 AV----SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
+ +I G + ++A +F + +G+ PD +T+ VM+ G + E
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 469 KYFSCMSKEYGVIPGEEHYACMVDL-LGRAGRLDKAMKLIEGM 510
F M KE G P + Y ++ LG +G L +++LIE M
Sbjct: 546 MLFRKM-KEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEM 586
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 172/393 (43%), Gaps = 58/393 (14%)
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASV-----------GALIHGKETHCYTIKCIL 266
+A+++F M P + L S A G ++G E YT+ ++
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
N C + +LL +++ RA P + +T++ ++ G+ G +
Sbjct: 113 NC-YCRKKKLLFAFSVL-----------GRAWKLGYEP---DTITFSTLVNGFCLEGRVS 157
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMA-CARLAALRSGREIHAYVLRNQY------DS 379
+++ L +M++ + +P+ T+S + C + GR A VL ++
Sbjct: 158 EAVALVDRMVEMKQ--RPDLVTVSTLINGLCLK------GRVSEALVLIDRMVEYGFQPD 209
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHKN----AVSWTSLITGYGMHGQGEEAVKV 435
+V Y +++ KSG+ +A +F M+ +N V ++ +I G ++A+ +
Sbjct: 210 EVTY--GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
F EM +G+ D +T+ ++ + G D+G K M +IP ++ ++D+
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFV 326
Query: 496 RAGRLDKAMKLIEGMPMK---PGQVVWVALLSG-CRK---HENVKLGEFAANKLLELESE 548
+ G+L +A +L M + P + + +L+ G C++ HE ++ + +K E
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE---P 383
Query: 549 NDGSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
+ +Y++L N Y A+R D R+ + G+
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 33 VVTMYGRCGALDHARQMFDEMY-KSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
++ Y + +D ++F E+ K I + +++N++V + QSG +A LFQ EMV
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ---EMV 447
Query: 92 DVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMH 151
+ V+ +L G ++ +S + + + N ++ +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 152 EASKVF----ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
+A +F ++ K DVV++N M+ G G A LF +M+E+ D +++ +I
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTL 238
+ ++ + +M+ C + T+
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 197/433 (45%), Gaps = 23/433 (5%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLF 84
N+ ++++ Y + A + D+M+ + + V++N+++ A+ L
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+M V Q D V+ V+ G + + L V + N+++D
Sbjct: 210 DRM---VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
K M +A +F+ M+ K +VV+++++++ + G + +A L M E I DV
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
++S +I + ++G EA ++ +M P+ VT SL++G L K+ +
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR--NVVTWTAMIGG 318
+ C D ++ N +I + K K + +F ++ + N VT+ +I G
Sbjct: 387 MVS-----KHCFPD-VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
Q G+ + + E+F +M+ V PN T + L + L + Y+ R++ +
Sbjct: 441 LFQAGDCDMAQEIFKEMVSD--GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVK 434
+ Y N +I+ K+G ++ +F N+ K + V++ ++I+G+ G EEA
Sbjct: 499 PTI-YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 435 VFEEMRKEGLLPD 447
+F+EM+++G LP+
Sbjct: 558 LFKEMKEDGTLPN 570
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 177/370 (47%), Gaps = 22/370 (5%)
Query: 152 EASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
EA + +RM K D+V++ +V G G + A L +M + +E V+ ++T+I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILN 267
G + +ALN+F++M++ +PN VT SL+S + G I+ +N
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEA 325
D + +A+ID + K + A ++D + + D ++VT++++I G+ H
Sbjct: 324 PD------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI-HAYVLRNQYDSDVLYV 384
+++ ++F M+ + P+ T + + + + G E+ R + V Y
Sbjct: 378 DEAKQMFEFMV--SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY- 434
Query: 385 ANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEEMR 440
N LI ++GD D+A+ +F M N +++ +L+ G +G+ E+A+ VFE ++
Sbjct: 435 -NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 441 KEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRL 500
+ + P T+ +M+ +G V++G F +S + GV P Y M+ R G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSK 552
Query: 501 DKAMKLIEGM 510
++A L + M
Sbjct: 553 EEADALFKEM 562
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 199/463 (42%), Gaps = 81/463 (17%)
Query: 150 MHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ +A +F M K ++ ++ +++ + + F+ ++L EQM+ I + ++S
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG--------------------- 244
+I + ++ AL V +M +PN VTL SLL+G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 245 ----CASVGALIHGKETHCYTIKCILNYDR-----CDQD--------------------- 274
+ LIHG H + + DR C D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 275 -------------ELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGY 319
+L+ N IID K K + A +F + K NVVT++++I
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
+G +D+ L S M+ +R + P+ FT S + A + L +++ +++ D
Sbjct: 302 CNYGRWSDASRLLSDMI--ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 380 DVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKV 435
++ ++ LI+ + +D A+ +F+ M K + V++ +LI G+ + + EE ++V
Sbjct: 360 SIVTYSS-LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
F EM + GL+ + +T+ +++ +G D + F M + GV P Y ++D L
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLC 477
Query: 496 RAGRLDKAMKLIEGM---PMKPGQVVWVALLSGCRKHENVKLG 535
+ G+L+KAM + E + M+P + ++ G K V+ G
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 189/444 (42%), Gaps = 57/444 (12%)
Query: 34 VTMYGRC--GALDHARQMFDEMYKSEIFD-LVSWNSMVAAYVQSGDTKSALGLFQKMWEM 90
V + G C G D A + ++M + ++ ++ +N+++ + AL LF+ EM
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK---EM 282
Query: 91 VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMM 150
I+ + V+ +++ + G W ++ + + DVF ++L+D + K G +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 151 HEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTV 206
EA K+++ M K+ +V++++++ G+ + A +FE M ++ DVV+++T+
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 207 IAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCIL 266
I G+ + E + VFR+M N VT L+ G G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD---------------- 446
Query: 267 NYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEAN 326
CD + + + D V P N++T+ ++ G ++G+
Sbjct: 447 ----CDMAQEI----------------FKEMVSDGVPP---NIMTYNTLLDGLCKNGKLE 483
Query: 327 DSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVAN 386
++ +F + Q ++P +T + + + + G ++ + DV+ N
Sbjct: 484 KAMVVFEYL--QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV-AYN 540
Query: 387 CLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKE 442
+I + + G + A +F MK N+ + +LI G E + ++ +EMR
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 443 GLLPDGITFLVMLYACSHSGMVDE 466
G D T + ++ H G +D+
Sbjct: 601 GFAGDAST-IGLVTNMLHDGRLDK 623
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI------------------------ 58
+N +VF +A++ + + G L A +++DEM K I
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 59 ------------FDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVL 106
D+V++N+++ + + + + +F++M + V + V+ ++
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG---NTVTYNILI 438
Query: 107 PAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD-- 164
G +++ V G+ ++ N+L+D K G + +A VFE +Q+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 165 --VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
+ ++N M+ G G E+ LF + + ++ DVV+++T+I+G+ +KG EA +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 223 FRQMQSCHSKPN 234
F++M+ + PN
Sbjct: 559 FKEMKEDGTLPN 570
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 228/516 (44%), Gaps = 63/516 (12%)
Query: 30 CNAVVTMYGRCGALDHARQMFDEMYKSE-IFDLVSWNSMVAAY--VQSGDTKSALGLFQK 86
C V +G+ LD A +F M KS + + +N +++A ++ D +L L K
Sbjct: 10 CLFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGK 69
Query: 87 MWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
M ++ + V+L ++L + + V G D +L+
Sbjct: 70 MMKL---GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 126
Query: 147 CGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
EA + +RM ++ ++V++ +V G G + A L +M IE DVV
Sbjct: 127 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 186
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++T+I + +ALN+F++M++ +PN VT SL+S
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS------------------- 227
Query: 263 KCILNYDR-CDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQ 321
C+ +Y R D +LL DM K + P N+VT+ A+I + +
Sbjct: 228 -CLCSYGRWSDASQLLS-----DMIEK------------KINP---NLVTFNALIDAFVK 266
Query: 322 HGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
G+ ++ +L M+K RS+ P+ FT + + L +++ +++ D
Sbjct: 267 EGKFVEAEKLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD- 323
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFE 437
L N LI + KS ++ +F M H+ + V++T+LI G G + A KVF+
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
+M +G+ PD +T+ ++L ++G +++ ++ F M K + Y M++ + +A
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKA 442
Query: 498 GRLDKAMKLIEGMPM---KPGQVVWVALLSG-CRKH 529
G++D L + + KP V + ++SG C K
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 478
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 160/342 (46%), Gaps = 23/342 (6%)
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLF 188
DV + N+++D K + +A +F+ M+ K +VV+++++++ G + +A L
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
M E+ I ++V+++ +I + ++G EA + M P+ T SL++G
Sbjct: 243 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 302
Query: 249 GALIHGKETHCYTIK--CILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD 306
L K+ + + C + D N +I + K K + +F ++ +
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLD--------TYNTLIKGFCKSKRVEDGTELFREMSHRG 354
Query: 307 R--NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRS 364
+ VT+T +I G G+ +++ ++F QM+ V P+ T S L L
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEK 412
Query: 365 GREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLI 420
E+ Y+ +++ D+ Y+ +I+ K+G +D +F ++ K N V++ ++I
Sbjct: 413 ALEVFDYMQKSEIKLDI-YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 421 TGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
+G +EA + ++M+++G LPD T+ ++ A G
Sbjct: 472 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
+N N+ NA++ + + G A ++ D+M K I D+ ++NS++ + A
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA- 308
Query: 82 GLFQKMWE-MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
++M+E MV D D + ++ F G ++ GL D +L
Sbjct: 309 ---KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365
Query: 141 VDMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+ G A KVF++M D+++++ ++ G + G E AL +F+ M++ I
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS 247
+LD+ ++T+I G + G + ++F + KPN VT +++SG S
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 476
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
++ ++F N+++ + LD A+QMF+ M + F DL ++N+++ + +S +
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
LF+ EM + D V+ ++ G ++V V G+ D+ + L+
Sbjct: 345 ELFR---EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 142 DMYAKCGMMHEASKVFERMQKKD------------------------------------- 164
D G + +A +VF+ MQK +
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461
Query: 165 --VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNV 222
VV++N M++G + + A L ++M+E+ D +++T+I + + G + +
Sbjct: 462 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 521
Query: 223 FRQMQSCH 230
R+M+SC
Sbjct: 522 IREMRSCR 529
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 221/510 (43%), Gaps = 66/510 (12%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYK-SEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
+ +V + + G + A FDE + + + + ++ A+ Q+ + + A L ++M E
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 90 M-VDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+D I + ++ + + G V G V L+++Y K G
Sbjct: 443 EGIDAPIAI----YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 149 MMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+ +A +V M+ K ++ +++ M+ G+ + + NA +FE M +E ++ DV+ ++
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKC 264
+I+ + G A+ ++MQ +P T + ++ G A G + E +C
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 265 ILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFD--SVAPKDRNVVTWTAMIGGYAQH 322
C + N +I+ + + + A I D ++A N T+T ++ GYA
Sbjct: 619 -----GC-VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSG----REIHAY-VLRNQY 377
G+ + E F+++ Q+ + + FT L AC + ++S +E+ A + RN
Sbjct: 673 GDTGKAFEYFTRL--QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS- 729
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQGEEAVKVFE 437
+V N LID +++ GD+ W EA + +
Sbjct: 730 -----FVYNILIDGWARRGDV-----------------W--------------EAADLIQ 753
Query: 438 EMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRA 497
+M+KEG+ PD T+ + ACS +G ++ + M + GV P + Y ++ RA
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARA 812
Query: 498 GRLDKAMKLIE---GMPMKPGQVVWVALLS 524
+KA+ E M +KP + V+ LL+
Sbjct: 813 SLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 217/531 (40%), Gaps = 102/531 (19%)
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSH---IGM-FENALTLFEQMREEN 195
+V Y + G MH A + FERM+ + + + + T H +G + AL+ +M+EE
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 196 IELDVVSWSTVIAGYAQKGLG-------------YEALN-------VFRQMQSCHSKPNE 235
IE+ +V++S ++ G+++ G ++ LN ++ Q+C+ + E
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTI-----KCILNYDRCDQ----DELLVINAIIDMY 286
+ + I+ YT+ K ++ + R + ++ +I++Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 287 TKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKP 344
TK IS A + + + N+ T++ MI G+ + + ++ +F M+K+ +KP
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE--GMKP 552
Query: 345 ------NAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
N + C + R A+++ +E+ LR++ + +I Y+KSGD+
Sbjct: 553 DVILYNNIISAFCGMGNMDR--AIQTVKEMQK--LRHRPTTRTFM---PIIHGYAKSGDM 605
Query: 399 DVARVVFDNMKH---------------------------------------KNAVSWTSL 419
+ VFD M+ N ++T +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 420 ITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYG 479
+ GY G +A + F ++ EGL D T+ +L AC SG + + MS
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN- 724
Query: 480 VIPGEEH-YACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGCRKHENVKLG 535
IP Y ++D R G + +A LI+ M +KP + + +S C K ++
Sbjct: 725 -IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR- 782
Query: 536 EFAANKLLELES----ENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
A + E+E+ N +YT L +A A + MK GIK
Sbjct: 783 --ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 220/528 (41%), Gaps = 50/528 (9%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N ++ Y + G +D A ++ EM ++ D++ NS++ ++ A +F +M E
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
M ++ V+ +L G ++ V+ G + N+L D K
Sbjct: 567 M---KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 150 MHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
+ A K+ +M DV ++N ++ G G + A+ F QM++ + D V+ T
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCT 682
Query: 206 VIAGYAQKGLGYEALNVFRQ-MQSCHSKP-------------------NEVTLVSLL--S 243
++ G + L +A + + +C +P N V+ L +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 244 GCASVGALI----------HGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSIS 293
G G I H + T+ D Q +L N +I + I
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 294 VARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
+A+ +F V +V T+ ++ Y + G+ ++ EL+ +M + N T +
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM--STHECEANTITHNI 860
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK-- 409
+ + + +++ ++ ++ S LID SKSG + A+ +F+ M
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 410 --HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
N + LI G+G G+ + A +F+ M KEG+ PD T+ V++ G VDEG
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 468 IKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMKPG 515
+ YF + KE G+ P Y +++ LG++ RL++A+ L M G
Sbjct: 981 LHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 220/551 (39%), Gaps = 63/551 (11%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSALGLF 84
N+ N ++ R LD A ++F M + ++ + Y +SGD+ SAL F
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+KM I + V+ L + A G KQ+ GL D N ++ Y
Sbjct: 457 EKMKTK---GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
+K G + EA K+ M + DV+ N+++ + A +F +M+E ++ V
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
V+++T++AG + G EA+ +F M PN +T +L L E
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD------CLCKNDEVTLA 627
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS----VAPKDRNVVTWTAMI 316
D ++ N II K + A F V P + VT ++
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP---DFVTLCTLL 684
Query: 317 GGYAQHGEANDSLELFSQMLKQDRSVKPNAF--TISCSLMACA----------RLAA--- 361
G + D+ ++ + L N F + S++A A RL A
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 362 LRSGREIHAYVLR---------------NQYDSDV-----LYVANCLIDTYSKSGDIDVA 401
R G I ++R ++ D+ L N LI ++ I++A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 402 RVVFDNMKHKNAV----SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
+ VF +K + ++ L+ YG G+ +E ++++EM + IT +++
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 458 CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMKP 514
+G VD+ + + + + P Y ++D L ++GRL +A +L EGM +P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 515 GQVVWVALLSG 525
++ L++G
Sbjct: 925 NCAIYNILING 935
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 200/477 (41%), Gaps = 61/477 (12%)
Query: 47 RQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVL 106
+ +F M + D+ ++N+++ V++G K A+ F +M ++V D V+L +L
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDF----VTLCTLL 684
Query: 107 PAF--ASM-------------------GSWWFGKQVHGFAVRSGL-----FEDVFVGN-- 138
P AS+ + ++ + +G+ F + V N
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 139 ---------SLVDMYAKCGMMHEASKVFERMQK-----KDVVSWNAMVTGYSHIGMFENA 184
++ K + A +FE+ K + ++N ++ G M E A
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
+F Q++ DV +++ ++ Y + G E ++++M + + N +T ++SG
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG 864
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
G + + + Y L DR +ID +K + A+ +F+ +
Sbjct: 865 LVKAGNVDDALDLY-YD----LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 305 KD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
N + +I G+ + GEA+ + LF +M+K+ V+P+ T S + + +
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE--GVRPDLKTYSVLVDCLCMVGRV 977
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-----WT 417
G + + + DV+ N +I+ KS ++ A V+F+ MK ++ +
Sbjct: 978 DEGLHYFKELKESGLNPDVV-CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
SLI G+ G EEA K++ E+++ GL P+ TF ++ S SG + + M
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 189/465 (40%), Gaps = 85/465 (18%)
Query: 148 GMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSW 203
G + E + VF+ MQK+ D ++ + S G + A +MRE L+ S+
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 204 STVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA------SVGALIHGKET 257
+ +I + EA+ V+R+M +P+ T SL+ G SV L+ ET
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 258 -------HCYTIKCI------------------LNYDRCDQDELLVINAIIDMYTKCKSI 292
+ +TI CI ++ + C D ++ +ID + +
Sbjct: 252 LGLKPNVYTFTI-CIRVLGRAGKINEAYEILKRMDDEGCGPD-VVTYTVLIDALCTARKL 309
Query: 293 SVARAIFDSVA----PKDR---------------------------------NVVTWTAM 315
A+ +F+ + DR +VVT+T +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRN 375
+ + G ++ + M +D+ + PN T + + R+ L E+ + +
Sbjct: 370 VDALCKAGNFGEAFDTLDVM--RDQGILPNLHTYNTLICGLLRVHRLDDALELFGN-MES 426
Query: 376 QYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEE 431
Y ID Y KSGD A F+ MK K N V+ + + G+ E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 432 AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
A ++F ++ GL+PD +T+ +M+ S G +DE IK S M E G P ++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEPDVIVVNSLI 545
Query: 492 DLLGRAGRLDKAMKL---IEGMPMKPGQVVWVALLSGCRKHENVK 533
+ L +A R+D+A K+ ++ M +KP V + LL+G K+ ++
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/555 (19%), Positives = 215/555 (38%), Gaps = 88/555 (15%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSAL 81
L NV+ + + GR G ++ A ++ M D+V++ ++ A + A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F+KM + D V+ + +L F+ KQ + G DV LV
Sbjct: 314 EVFEKMKTGRH---KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 142 DMYAKCGMMHEASKVFERMQKKDVV----SWNAMVTGYSHIGMFENALTLFEQMREENIE 197
D K G EA + M+ + ++ ++N ++ G + ++AL LF M ++
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVG-------- 249
++ I Y + G AL F +M++ PN V + L A G
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 250 -------ALIHGKETHCYTIKCILNYDRCD--------------QDELLVINAIIDMYTK 288
L+ T+ +KC D + +++V+N++I+ K
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 289 CKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNA 346
+ A +F + VVT+ ++ G ++G+ +++ELF M++ + PN
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ--KGCPPNT 608
Query: 347 FTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA-RVVF 405
T N L D K+ ++ +A +++F
Sbjct: 609 ITF------------------------------------NTLFDCLCKNDEVTLALKMLF 632
Query: 406 DNMKH---KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSG 462
M + ++ ++I G +GQ +EA+ F +M+K + PD +T +L +
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAS 691
Query: 463 MVDEGIKYFSCMSKEYGVIPGEEHYACMV-DLLGRAGRLDKAM----KLIEGMPMKPGQV 517
++++ K + P + ++ +L AG +D A+ +L+ + G
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDS 750
Query: 518 VWVALLSGCRKHENV 532
+ V ++ KH NV
Sbjct: 751 ILVPIIRYSCKHNNV 765
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 39 RCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMW-EMVDVDIQ 96
+ G L A+Q+F+ M + +N ++ + ++G+ +A LF++M E V D++
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 97 LDAVSLVNVLPAFASM--GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEAS 154
+V LV+ L + G +F K++ SGL DV N +++ K + EA
Sbjct: 963 TYSV-LVDCLCMVGRVDEGLHYF-KELK----ESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 155 KVFERMQK-----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAG 209
+F M+ D+ ++N+++ GM E A ++ +++ +E +V +++ +I G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 210 YAQKGLGYEALNVFRQMQSCHSKPNEVT 237
Y+ G A V++ M + PN T
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 415 SWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCM 474
+++SL+ G G + + + +EM GL P+ TF + + +G ++E + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPM---KPGQVVWVALLSGCRKHEN 531
E G P Y ++D L A +LD A ++ E M KP +V ++ LL R +N
Sbjct: 285 DDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD--RFSDN 341
Query: 532 VKLGEFAANKLLELESENDG------SYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
L K E E DG ++T+L + A + + +M+ GI
Sbjct: 342 RDLDSV---KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 26/346 (7%)
Query: 136 VGNSLVDMYAKCGMMHEASKVFE---RMQK-KDVVSWNAMVTGYSHIGMFENALTLFEQM 191
V NSL++ K + +A K+F+ R Q D ++N ++ G +G E AL L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH-SKPNEVTLVSLLSGCASVGA 250
E D+V+++T+I G+ + +A +F+ ++S P+ VT S++SG G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RN 308
+ ++ + + N ++D Y K + A I + +
Sbjct: 293 MREASSLLDDMLRLGIYPTN------VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 309 VVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
VVT+T++I GY + G+ + L+ +M R + PNAFT S + A L RE+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEM--NARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 369 HAYVLRNQYDSDVL---YVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLIT 421
L D++ ++ N +ID + K+G ++ A V+ + M+ K + +++T LI
Sbjct: 405 ----LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
G+ M G+ EAV +F +M G PD IT +L +GM E
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 115/254 (45%), Gaps = 44/254 (17%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIF--DLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
N ++ + + L+ A +MF ++ + D+V++ SM++ Y ++G + A L
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD--- 301
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+M+ + I V+ ++ +A G +++ G + G F DV SL+D Y + G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 149 MMHEASKVFERMQ-----------------------------------KKDVVS----WN 169
+ + +++E M KD++ +N
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 170 AMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSC 229
++ G+ G A + E+M ++ + D ++++ +I G+ KG +EA+++F +M +
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 230 HSKPNEVTLVSLLS 243
P+++T+ SLLS
Sbjct: 482 GCSPDKITVSSLLS 495
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 170/399 (42%), Gaps = 94/399 (23%)
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDV----VSWNAMVTGYSHIGMFENALTLF-EQMREE 194
LV +A+ G +H A+ + +Q +V + N+++ + E+A+ LF E +R +
Sbjct: 144 LVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQ 201
Query: 195 NIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
+ D +++ +I G G +AL + M +P+ VT +L+ G
Sbjct: 202 SCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG---------- 250
Query: 255 KETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTA 314
C +EL N +M+ KS SV +VVT+T+
Sbjct: 251 ---------------FCKSNEL---NKASEMFKDVKSGSVCSP----------DVVTYTS 282
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
MI GY + G+ ++ L ML RL
Sbjct: 283 MISGYCKAGKMREASSLLDDML---------------------RLGI------------- 308
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGE 430
Y ++V + N L+D Y+K+G++ A + M + V++TSLI GY GQ
Sbjct: 309 --YPTNVTF--NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYA-CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC 489
+ +++EEM G+ P+ T+ +++ A C+ + ++ SK+ +IP Y
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNP 422
Query: 490 MVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSG 525
++D +AG++++A ++E M KP ++ + L+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 164/378 (43%), Gaps = 49/378 (12%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+V+ + G L A + + ++ E +V NS++ V+ + A+ LF +
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVV-NSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
+ D + ++ +G ++ G G D+ N+L+ + K +++
Sbjct: 203 CN---DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 153 ASKVFERMQK-----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
AS++F+ ++ DVV++ +M++GY G A +L + M I V+++ ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE----------- 256
GYA+ G A + +M S P+ VT SL+ G VG + G
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 257 THCYTIKCILNYDRCDQDELL-------------------VINAIIDMYTKCKSISVARA 297
+ +T ++N C+++ LL + N +ID + K ++ A
Sbjct: 380 PNAFTYSILIN-ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 298 IFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
I + + K + +T+T +I G+ G +++ +F +M+ S P+ T+S SL++
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS--PDKITVS-SLLS 495
Query: 356 CARLAALRSGREIHAYVL 373
C L++G AY L
Sbjct: 496 C----LLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 26/346 (7%)
Query: 136 VGNSLVDMYAKCGMMHEASKVFE---RMQK-KDVVSWNAMVTGYSHIGMFENALTLFEQM 191
V NSL++ K + +A K+F+ R Q D ++N ++ G +G E AL L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH-SKPNEVTLVSLLSGCASVGA 250
E D+V+++T+I G+ + +A +F+ ++S P+ VT S++SG G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 251 LIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RN 308
+ ++ + + N ++D Y K + A I + +
Sbjct: 293 MREASSLLDDMLRLGIYPTN------VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 309 VVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
VVT+T++I GY + G+ + L+ +M R + PNAFT S + A L RE+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEM--NARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 369 HAYVLRNQYDSDVL---YVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLIT 421
L D++ ++ N +ID + K+G ++ A V+ + M+ K + +++T LI
Sbjct: 405 ----LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEG 467
G+ M G+ EAV +F +M G PD IT +L +GM E
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 115/254 (45%), Gaps = 44/254 (17%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIF--DLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
N ++ + + L+ A +MF ++ + D+V++ SM++ Y ++G + A L
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD--- 301
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
+M+ + I V+ ++ +A G +++ G + G F DV SL+D Y + G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 149 MMHEASKVFERMQ-----------------------------------KKDVVS----WN 169
+ + +++E M KD++ +N
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 170 AMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSC 229
++ G+ G A + E+M ++ + D ++++ +I G+ KG +EA+++F +M +
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 230 HSKPNEVTLVSLLS 243
P+++T+ SLLS
Sbjct: 482 GCSPDKITVSSLLS 495
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 170/399 (42%), Gaps = 94/399 (23%)
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDV----VSWNAMVTGYSHIGMFENALTLF-EQMREE 194
LV +A+ G +H A+ + +Q +V + N+++ + E+A+ LF E +R +
Sbjct: 144 LVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQ 201
Query: 195 NIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG 254
+ D +++ +I G G +AL + M +P+ VT +L+ G
Sbjct: 202 SCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG---------- 250
Query: 255 KETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTA 314
C +EL N +M+ KS SV +VVT+T+
Sbjct: 251 ---------------FCKSNEL---NKASEMFKDVKSGSVCSP----------DVVTYTS 282
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
MI GY + G+ ++ L ML RL
Sbjct: 283 MISGYCKAGKMREASSLLDDML---------------------RLGI------------- 308
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGE 430
Y ++V + N L+D Y+K+G++ A + M + V++TSLI GY GQ
Sbjct: 309 --YPTNVTF--NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYA-CSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC 489
+ +++EEM G+ P+ T+ +++ A C+ + ++ SK+ +IP Y
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD--IIPQPFMYNP 422
Query: 490 MVDLLGRAGRLDKAMKLIEGM---PMKPGQVVWVALLSG 525
++D +AG++++A ++E M KP ++ + L+ G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 164/378 (43%), Gaps = 49/378 (12%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
+V+ + G L A + + ++ E +V NS++ V+ + A+ LF +
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVV-NSLLNTLVKLDRVEDAMKLFDEHLRFQS 202
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
+ D + ++ +G ++ G G D+ N+L+ + K +++
Sbjct: 203 CN---DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 153 ASKVFERMQK-----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVI 207
AS++F+ ++ DVV++ +M++GY G A +L + M I V+++ ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 208 AGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKE----------- 256
GYA+ G A + +M S P+ VT SL+ G VG + G
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 257 THCYTIKCILNYDRCDQDELL-------------------VINAIIDMYTKCKSISVARA 297
+ +T ++N C+++ LL + N +ID + K ++ A
Sbjct: 380 PNAFTYSILIN-ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 298 IFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMA 355
I + + K + +T+T +I G+ G +++ +F +M+ S P+ T+S SL++
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS--PDKITVS-SLLS 495
Query: 356 CARLAALRSGREIHAYVL 373
C L++G AY L
Sbjct: 496 C----LLKAGMAKEAYHL 509
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 204/470 (43%), Gaps = 54/470 (11%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
NV N V+ + G + A + M K D++S++++V Y + G+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE-------L 740
Query: 85 QKMWEMVDV----DIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
K+W++++V ++ ++ +++ + ++ +R G+ D V +L
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800
Query: 141 VDMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+D + K G + ASK F M +D V+++ A+++G+ IG A LF +M + +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA------SVGA 250
E D V+++ +I GY + G +A V M PN VT +L+ G S
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 251 LIH-----GKETHCYTIKCILN-----------YDRCDQDELLVINA-------IIDMYT 287
L+H G + + +T I+N + E +NA ++D Y
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 288 KCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
K + A+ I + K +VT+ ++ G+ HG D +L + ML + + PN
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPN 1038
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
A T + + L++ I+ + D N L+ + K+ ++ A +F
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN-LVKGHCKARNMKEAWFLF 1097
Query: 406 DNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
MK K + +++ LI G+ + EA +VF++MR+EGL D F
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 195/488 (39%), Gaps = 73/488 (14%)
Query: 72 VQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF 131
V S D K A L WE +++ V ++L + W +V
Sbjct: 573 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL--VYTYKDWGSDPRVF--------- 621
Query: 132 EDVFVGNSLVDMYAKCGMMHEASKVFERMQK------------------KD--------- 164
DVF LVD G++ EA +VFE+M KD
Sbjct: 622 -DVFF-QVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 675
Query: 165 -------------VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
V S+N ++ +G + A L M + DV+S+STV+ GY
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRC 271
+ G + + M+ KPN S++ + L +E I+ + D
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT- 794
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSL 329
+V +ID + K I A F + +D +V+T+TA+I G+ Q G+ ++
Sbjct: 795 -----VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
+LF +M + ++P++ T + + + ++ +H ++++ +V+ LI
Sbjct: 850 KLFHEMFC--KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV-TYTTLI 906
Query: 390 DTYSKSGDIDVARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
D K GD+D A + M N ++ S++ G G EEAVK+ E GL
Sbjct: 907 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
D +T+ ++ A SG +D+ + M + G+ P + +++ G L+ K
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEK 1025
Query: 506 LIEGMPMK 513
L+ M K
Sbjct: 1026 LLNWMLAK 1033
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 204/468 (43%), Gaps = 61/468 (13%)
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF------E 182
G DV +++V+ Y + G + + K+ E M++K + N+ + G S IG+
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYG-SIIGLLCRICKLA 776
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
A F +M + I D V ++T+I G+ ++G A F +M S P+ +T +++
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 243 SGCASVGALIH-GKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS 301
SG +G ++ GK H +M+ CK +
Sbjct: 837 SGFCQIGDMVEAGKLFH-------------------------EMF--CKGL--------- 860
Query: 302 VAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAA 361
+ + VT+T +I GY + G D+ + + M++ S PN T + + +
Sbjct: 861 ----EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGD 914
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWT 417
L S E+ + + ++ + N +++ KSG+I+ A + + + + V++T
Sbjct: 915 LDSANELLHEMWKIGLQPNI-FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
+L+ Y G+ ++A ++ +EM +GL P +TF V++ GM+++G K + M +
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKL 534
G+ P + +V L A + + M + P + L+ G K N+K
Sbjct: 1034 -GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 535 GEFAANKLL-ELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
F ++ + S + +Y++L + +++ + + M+ G+
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 204/470 (43%), Gaps = 54/470 (11%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
NV N V+ + G + A + M K D++S++++V Y + G+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE-------L 740
Query: 85 QKMWEMVDV----DIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
K+W++++V ++ ++ +++ + ++ +R G+ D V +L
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800
Query: 141 VDMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENI 196
+D + K G + ASK F M +D V+++ A+++G+ IG A LF +M + +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 197 ELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCA------SVGA 250
E D V+++ +I GY + G +A V M PN VT +L+ G S
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 251 LIH-----GKETHCYTIKCILN-----------YDRCDQDELLVINA-------IIDMYT 287
L+H G + + +T I+N + E +NA ++D Y
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 288 KCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
K + A+ I + K +VT+ ++ G+ HG D +L + ML + + PN
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPN 1038
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
A T + + L++ I+ + D N L+ + K+ ++ A +F
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN-LVKGHCKARNMKEAWFLF 1097
Query: 406 DNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
MK K + +++ LI G+ + EA +VF++MR+EGL D F
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 195/488 (39%), Gaps = 73/488 (14%)
Query: 72 VQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLF 131
V S D K A L WE +++ V ++L + W +V
Sbjct: 573 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL--VYTYKDWGSDPRVF--------- 621
Query: 132 EDVFVGNSLVDMYAKCGMMHEASKVFERMQK------------------KD--------- 164
DVF LVD G++ EA +VFE+M KD
Sbjct: 622 -DVFF-QVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 675
Query: 165 -------------VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
V S+N ++ +G + A L M + DV+S+STV+ GY
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRC 271
+ G + + M+ KPN S++ + L +E I+ + D
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT- 794
Query: 272 DQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSL 329
+V +ID + K I A F + +D +V+T+TA+I G+ Q G+ ++
Sbjct: 795 -----VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 330 ELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLI 389
+LF +M + ++P++ T + + + ++ +H ++++ +V+ LI
Sbjct: 850 KLFHEMFC--KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV-TYTTLI 906
Query: 390 DTYSKSGDIDVARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLL 445
D K GD+D A + M N ++ S++ G G EEAVK+ E GL
Sbjct: 907 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 446 PDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMK 505
D +T+ ++ A SG +D+ + M + G+ P + +++ G L+ K
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEK 1025
Query: 506 LIEGMPMK 513
L+ M K
Sbjct: 1026 LLNWMLAK 1033
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 204/468 (43%), Gaps = 61/468 (13%)
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMF------E 182
G DV +++V+ Y + G + + K+ E M++K + N+ + G S IG+
Sbjct: 719 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYG-SIIGLLCRICKLA 776
Query: 183 NALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL 242
A F +M + I D V ++T+I G+ ++G A F +M S P+ +T +++
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 243 SGCASVGALIH-GKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS 301
SG +G ++ GK H +M+ CK +
Sbjct: 837 SGFCQIGDMVEAGKLFH-------------------------EMF--CKGL--------- 860
Query: 302 VAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAA 361
+ + VT+T +I GY + G D+ + + M++ S PN T + + +
Sbjct: 861 ----EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGD 914
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWT 417
L S E+ + + ++ + N +++ KSG+I+ A + + + + V++T
Sbjct: 915 LDSANELLHEMWKIGLQPNI-FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
+L+ Y G+ ++A ++ +EM +GL P +TF V++ GM+++G K + M +
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 478 YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKL 534
G+ P + +V L A + + M + P + L+ G K N+K
Sbjct: 1034 -GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092
Query: 535 GEFAANKLL-ELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGI 581
F ++ + S + +Y++L + +++ + + M+ G+
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 199/448 (44%), Gaps = 41/448 (9%)
Query: 100 VSLVNVLPAFASMGSWWF----GKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASK 155
V +L A A M + G+Q+ G+ D++ + ++ + + + A
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTL----GISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 156 VFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYA 211
V +M K D+V+ ++++ GY H +A+ L +QM E + D +++T+I G
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 212 QKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVG----ALIHGKETHCYTIKCILN 267
EA+ + QM +P+ VT ++++G G AL + IK
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA--- 256
Query: 268 YDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEA 325
+++ N IID K + + VA +F + K NVVT+ ++I +G
Sbjct: 257 -------NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 326 NDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVA 385
+D+ L S ML ++ + PN T + + A + L ++H +++ D D +
Sbjct: 310 SDASRLLSNML--EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI-TY 366
Query: 386 NCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRK 441
N LI+ + +D A+ +F M K N ++ +LI G+ + E+ V++F EM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 442 EGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE-EHYACMVDLLGRAGRL 500
GL+ + +T+ ++ +G D F M +P + Y+ ++ L G+L
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR--VPTDIMTYSILLHGLCSYGKL 484
Query: 501 DKAM---KLIEGMPMKPGQVVWVALLSG 525
D A+ K ++ M+ ++ ++ G
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEG 512
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 190/419 (45%), Gaps = 26/419 (6%)
Query: 48 QMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLP 107
QM + YK + F ++ +++ A+ L +MV Q D V+ V+
Sbjct: 178 QMVEMGYKPDTF---TFTTLIHGLFLHNKASEAVALVD---QMVQRGCQPDLVTYGTVVN 231
Query: 108 AFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK---- 163
G + + + +V + N+++D K + A +F M+ K
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 164 DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVF 223
+VV++N+++ + G + +A L M E+ I +VV+++ +I + ++G EA +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 224 RQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIK--CILNYDRCDQDELLVINA 281
+M P+ +T L++G L K+ + + C+ N + N
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN--------IQTYNT 403
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDR--NVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
+I+ + KCK + +F ++ + N VT+T +I G+ Q G+ + + +F QM+
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN- 462
Query: 340 RSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDID 399
V + T S L L + I Y+ +++ + ++ ++ N +I+ K+G +
Sbjct: 463 -RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI-FIYNTMIEGMCKAGKVG 520
Query: 400 VARVVFDNMKHK-NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA 457
A +F ++ K + V++ ++I+G +EA +F +M+++G LP+ T+ ++ A
Sbjct: 521 EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 164/359 (45%), Gaps = 25/359 (6%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
+ +NV + N ++ + ++ A +F EM I ++V++NS++ G A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L M E I + V+ ++ AF G +++H ++ + D N L+
Sbjct: 314 RLLSNMLEK---KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 142 DMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
+ + + EA ++F+ M KD + ++N ++ G+ E+ + LF +M + +
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+ V+++T+I G+ Q G A VF+QM S + +T LL G S G L
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL------ 484
Query: 258 HCYTIKCILNYDRCDQDEL--LVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAM 315
T I Y + + EL + N +I+ K + A +F S++ K +VVT+ M
Sbjct: 485 --DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP-DVVTYNTM 541
Query: 316 IGGYAQHGEANDSLELFSQMLKQDRSVKPNAFT----ISCSLMACARLAALRSGREIHA 370
I G ++ +LF +M K+D ++ PN+ T I +L C R A+ +E+ +
Sbjct: 542 ISGLCSKRLLQEADDLFRKM-KEDGTL-PNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 195/447 (43%), Gaps = 56/447 (12%)
Query: 106 LPAFASM---GSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK 162
+P+F ++ G W FA SG + ++ + N L D+ + +A +F M K
Sbjct: 27 VPSFFNLCGSGCWE-----RSFASASGDYREI-LRNRLSDIIK----VDDAVDLFGDMVK 76
Query: 163 K----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYE 218
+V +N +++ + + FE ++L EQM+ I D+ ++S I + ++
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 219 ALNVFRQMQSCHSKPNEVTLVSLLSG-CAS------------------------VGALIH 253
AL V +M +P+ VTL SLL+G C S LIH
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 254 GKETHCYTIKCILNYD----RCDQDELLVINAIIDMYTKCKSISVARAIFDSV--APKDR 307
G H + + D R Q +L+ +++ K I +A + + + A
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
NVV + +I ++ +++LF++M + + ++PN T + +
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEM--ETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGY 423
+ + +L + + +V+ N LID + K G + A + + M + + +++ LI G+
Sbjct: 315 LLSNMLEKKINPNVV-TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
MH + +EA ++F+ M + LP+ T+ ++ V++G++ F MS+ G++
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGN 432
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGM 510
Y ++ +AG D A + + M
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQM 459
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 222/509 (43%), Gaps = 31/509 (6%)
Query: 22 VLNSNVFVC----NAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGD 76
+L S V +C N ++ + + G + ++ D++ K + +L ++N + Q G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 77 TKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFV 136
A+ + + +++ + D ++ N++ + + G V GL D +
Sbjct: 267 LDGAV---RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 137 GNSLVDMYAKCGMMHEASK-----VFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM 191
N+L+ Y K GM+ A + VF D ++ +++ G H G AL LF +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVP-DQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
+ I+ +V+ ++T+I G + +G+ EA + +M P T L++G +G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNV 309
+K +++ + ++ N +I Y+ + A I D + D +V
Sbjct: 443 SDADGL----VKVMIS--KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIH 369
T+ +++ G + + D +E + M+ ++ PN FT + L + R L +
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMV--EKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 370 AYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVSWTSLITGYGMHGQG 429
+ + D + LID + K+GD+D A +F M+ VS ++ +H
Sbjct: 555 EEMKNKSVNPDAVTFGT-LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 430 EE-----AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGE 484
E+ A K+F+EM L PDG T+ +M+ +G V+ G K+ M E G IP
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM-ENGFIPSL 672
Query: 485 EHYACMVDLLGRAGRLDKAMKLIEGMPMK 513
+++ L R+ +A +I M K
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 178/400 (44%), Gaps = 32/400 (8%)
Query: 126 VRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMF 181
V + + E V+VG + Y + G + EA VFERM D V S+NA+++ G F
Sbjct: 70 VGNHMLEGVYVG--AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYF 127
Query: 182 ENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSL 241
+ A ++ +MR+ I DV S++ + + + + AL + M S + N V ++
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 242 LSG-----CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVAR 296
+ G + G + GK C+ + N ++ + K +
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTF-----------NKLLRVLCKKGDVKECE 236
Query: 297 AIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLM 354
+ D V + N+ T+ I G Q GE + ++ + +++Q KP+ T + +
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ--GPKPDVITYNNLIY 294
Query: 355 ACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVA-RVVFD---NMKH 410
+ + + E++ + N+ Y N LI Y K G + +A R+V D N
Sbjct: 295 GLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 411 KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKY 470
+ ++ SLI G G+ A+ +F E +G+ P+ I + ++ S+ GM+ E +
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 471 FSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
+ MS E G+IP + + +V+ L + G + A L++ M
Sbjct: 414 ANEMS-EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 199/489 (40%), Gaps = 25/489 (5%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
++V++ ++V + + LF KM + L + +L G +
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLA---SGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASK----VFERMQKKDVVSWNAMVTGY 175
++ ++ G+ ++F N + + G + A + + E+ K DV+++N ++ G
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
F+ A +M E +E D +++T+IAGY + G+ A + P++
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
T SL+ G L H ET+ + + +++ N +I + I A
Sbjct: 357 FTYRSLIDG------LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 296 RAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
+ + ++ K V T+ ++ G + G +D+ L M+ + P+ FT + +
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI--SKGYFPDIFTFNILI 468
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK-- 411
+ + + EI +L N D DV Y N L++ K+ + + M K
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDV-YTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 412 --NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIK 469
N ++ L+ + + +EA+ + EEM+ + + PD +TF ++ +G +D
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 470 YFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGC 526
F M + Y V Y ++ + A KL + M + P + ++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 527 RKHENVKLG 535
K NV LG
Sbjct: 648 CKTGNVNLG 656
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 234/530 (44%), Gaps = 76/530 (14%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVS-WNSMVAAYVQSGDTKS 79
W + +A++ +GR G A + D+M ++ I S +N+++ A SG+ +
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSG--LFEDVFVG 137
AL + +K M D + D V+ VL A+ S + K + F + G + D
Sbjct: 232 ALEVCKK---MTDNGVGPDLVTHNIVLSAYKS--GRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKK------DVVSWNAMVTGYSHIGMFENALTLFEQM 191
N ++ +K G +A +F M++K DVV++ +++ YS G EN +FE M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
E ++ ++VS++ ++ YA G+ AL+V ++ P+ V+
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS-------------- 392
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR--NV 309
YT C+LN Y + + A+ +F + + R NV
Sbjct: 393 --------YT--CLLN-----------------SYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIH 369
VT+ A+I Y +G +++E+F QM +QD +KPN ++ L AC+ RS ++++
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQM-EQD-GIKPNVVSVCTLLAACS-----RSKKKVN 478
Query: 370 AYVLRNQYDSDVLYVA----NCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLIT 421
+ + S + + N I +Y + +++ A ++ +M+ K ++V++T LI+
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI 481
G + EA+ +EM + + +L A S G V E F+ M K G
Sbjct: 539 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCE 597
Query: 482 PGEEHYACMVDLLGRAGRLDKAMKL---IEGMPMKPGQVVWVALLSGCRK 528
P Y M+ + + KA +L +E ++P + AL+ K
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 184/445 (41%), Gaps = 60/445 (13%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N V++ Y A F+ M +++ D ++N ++ + G + AL LF M E
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
+ + D V+ +++ ++ G + V V GL ++ N+L+ YA GM
Sbjct: 312 K-RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 370
Query: 150 MHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
A V +++ DVVS+ ++ Y A +F MR+E + +VV+++
Sbjct: 371 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I Y G EA+ +FRQM+ KPN V++ +LL+ C+
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR------------------ 472
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ + + D +L S + +R I + N + + IG Y E
Sbjct: 473 -SKKKVNVDTVL-------------SAAQSRGI-------NLNTAAYNSAIGSYINAAEL 511
Query: 326 NDSLELFSQMLKQDRSVKPNAFTI----SCSLMACARLAALRSGREIHAYVLRNQYDSDV 381
++ L+ M K+ FTI SC + + E + L + S V
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 382 LYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITGYGMHGQGEEAVKVFE 437
L C YSK G + A +F+ MK + +++TS++ Y + +A ++F
Sbjct: 572 L----C---AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 438 EMRKEGLLPDGITFLVMLYACSHSG 462
EM G+ PD I ++ A + G
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGG 649
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 155/372 (41%), Gaps = 52/372 (13%)
Query: 168 WNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
+N M+ ++ + A LF +M++ + + D ++ +I + + G A+N+ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
P+ T +L++ C S G E C D +L+ N ++ Y
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEV------CKKMTDNGVGPDLVTHNIVLSAYK 259
Query: 288 KCKSISVARAIFDSV--APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+ S A + F+ + A + T+ +I ++ G+++ +L+LF+ M ++ +P+
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
T + ++ YS G+I+ R VF
Sbjct: 320 VVTFT------------------------------------SIMHLYSVKGEIENCRAVF 343
Query: 406 DNMK----HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
+ M N VS+ +L+ Y +HG A+ V ++++ G++PD +++ +L + S
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVV 518
+ + F M KE P Y ++D G G L +A+++ M +KP V
Sbjct: 404 RQPGKAKEVFLMMRKERRK-PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 519 WVALLSGCRKHE 530
LL+ C + +
Sbjct: 463 VCTLLAACSRSK 474
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 234/530 (44%), Gaps = 76/530 (14%)
Query: 21 WVLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIFDLVS-WNSMVAAYVQSGDTKS 79
W + +A++ +GR G A + D+M ++ I S +N+++ A SG+ +
Sbjct: 40 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 99
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSG--LFEDVFVG 137
AL + +K M D + D V+ VL A+ S + K + F + G + D
Sbjct: 100 ALEVCKK---MTDNGVGPDLVTHNIVLSAYKS--GRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 138 NSLVDMYAKCGMMHEASKVFERMQKK------DVVSWNAMVTGYSHIGMFENALTLFEQM 191
N ++ +K G +A +F M++K DVV++ +++ YS G EN +FE M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
E ++ ++VS++ ++ YA G+ AL+V ++ P+ V+
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS-------------- 260
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDR--NV 309
YT C+LN Y + + A+ +F + + R NV
Sbjct: 261 --------YT--CLLNS-----------------YGRSRQPGKAKEVFLMMRKERRKPNV 293
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIH 369
VT+ A+I Y +G +++E+F QM +QD +KPN ++ L AC+ RS ++++
Sbjct: 294 VTYNALIDAYGSNGFLAEAVEIFRQM-EQD-GIKPNVVSVCTLLAACS-----RSKKKVN 346
Query: 370 AYVLRNQYDSDVLYVA----NCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLIT 421
+ + S + + N I +Y + +++ A ++ +M+ K ++V++T LI+
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Query: 422 GYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVI 481
G + EA+ +EM + + +L A S G V E F+ M K G
Sbjct: 407 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCE 465
Query: 482 PGEEHYACMVDLLGRAGRLDKAMKL---IEGMPMKPGQVVWVALLSGCRK 528
P Y M+ + + KA +L +E ++P + AL+ K
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 187/446 (41%), Gaps = 62/446 (13%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N V++ Y A F+ M +++ D ++N ++ + G + AL LF M E
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGM 149
+ + D V+ +++ ++ G + V V GL ++ N+L+ YA GM
Sbjct: 180 K-RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 238
Query: 150 MHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWST 205
A V +++ DVVS+ ++ Y A +F MR+E + +VV+++
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 206 VIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCI 265
+I Y G EA+ +FRQM+ KPN V++ +LL+ C+
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR------------------ 340
Query: 266 LNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEA 325
+ + + D +L S + +R I + N + + IG Y E
Sbjct: 341 -SKKKVNVDTVL-------------SAAQSRGI-------NLNTAAYNSAIGSYINAAEL 379
Query: 326 NDSLELFSQMLKQDRSVKPNAFTI----SCSLMACAR-LAALRSGREIHAYVLRNQYDSD 380
++ L+ M K+ FTI SC + ++ L+ ++ + + Y S
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS- 438
Query: 381 VLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITGYGMHGQGEEAVKVF 436
++ YSK G + A +F+ MK + +++TS++ Y + +A ++F
Sbjct: 439 -------VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELF 491
Query: 437 EEMRKEGLLPDGITFLVMLYACSHSG 462
EM G+ PD I ++ A + G
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGG 517
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 156/372 (41%), Gaps = 52/372 (13%)
Query: 168 WNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQ 227
+N M+ ++ + A LF +M++ + + D ++ +I + + G A+N+ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 228 SCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYT 287
P+ T +L++ C S G E C D +L+ N ++ Y
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEV------CKKMTDNGVGPDLVTHNIVLSAYK 127
Query: 288 KCKSISVARAIFDSV--APKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPN 345
+ S A + F+ + A + T+ +I ++ G+++ +L+LF+ M ++ +P+
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 346 AFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVF 405
T + ++ YS G+I+ R VF
Sbjct: 188 VVTFT------------------------------------SIMHLYSVKGEIENCRAVF 211
Query: 406 DNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHS 461
+ M + N VS+ +L+ Y +HG A+ V ++++ G++PD +++ +L + S
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 462 GMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVV 518
+ + F M KE P Y ++D G G L +A+++ M +KP V
Sbjct: 272 RQPGKAKEVFLMMRKERRK-PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 519 WVALLSGCRKHE 530
LL+ C + +
Sbjct: 331 VCTLLAACSRSK 342
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 229/533 (42%), Gaps = 77/533 (14%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N ++ +YG+ G L+ A +F EM KS + D V++N+M+ G A L +KM E
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 90 MVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS---------- 139
I D + +L A G + + + GLF D +
Sbjct: 369 K---GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 140 -------------------------LVDMYAKCGMMHEASKVFERMQKKDVVSWN---AM 171
++ MY G++ +A +FER Q V+S A+
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 172 VTGYSHIGMFENALTLFEQMREENIEL-DVVSWSTVIAGYAQKGLGYEALNVFRQMQSCH 230
+ Y+ G++ A T+F R + + DV+ ++ +I Y + L +AL++F+ M++
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 231 SKPNEVTLVSLLSGCASVG-----------ALIHGKETHCYTIKC-ILNYDRCDQDELLV 278
+ P+E T SL A V L G + C T I +Y R L +
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR-----LGL 600
Query: 279 INAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
++ +D+Y + V N V + ++I G+A+ G ++++ F M +
Sbjct: 601 LSDAVDLYEAMEKTGV-----------KPNEVVYGSLINGFAESGMVEEAIQYFRMM--E 647
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
+ V+ N ++ + A +++ L R ++ + ++ DV +N ++ + G +
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA-ASNSMLSLCADLGIV 706
Query: 399 DVARVVFDNMKHK---NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVML 455
A +F+ ++ K + +S+ +++ Y G +EA++V EEMR+ GLL D +F ++
Sbjct: 707 SEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 456 YACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIE 508
+ G + E + F M E ++ + + LL + G +A+ ++
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQ 819
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 136/576 (23%), Positives = 238/576 (41%), Gaps = 109/576 (18%)
Query: 33 VVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMV 91
+V +YG+ G + A M + F D V+ ++V + SG+ A F K W
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-KGWCAG 244
Query: 92 DVDIQLDAV----------SLVNVLPAFASMGSWWFG------KQVHGFA------VRSG 129
VD+ LD++ S VN L F SM + G K +H FA R
Sbjct: 245 KVDLDLDSIDDFPKNGSAQSPVN-LKQFLSMELFKVGARNPIEKSLH-FASGSDSSPRKP 302
Query: 130 LFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENAL 185
F N+L+D+Y K G +++A+ +F M K D V++N M+ G A
Sbjct: 303 RLTSTF--NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 186 TLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLL--- 242
+L ++M E+ I D +++ +++ +A G AL +R+++ P+ VT ++L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 243 ---SGCASVGALIHGKETHC-----YTIKCILN--------------YDRCDQDELL--- 277
A V A+I + + +++ I+ ++R D +L
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 278 VINAIIDMYTKCKSISVARAIF---DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQ 334
+ A+ID+Y + A +F +++ + +V+ + MI Y + +L LF
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 335 MLKQ---------------------------------DRSVKPNAFTISCSLMACARLAA 361
M Q D KP T + + + RL
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 362 LRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWT 417
L +++ + + + + V LI+ +++SG ++ A F M+ N + T
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEV-VYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 418 SLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE 477
SLI Y G EEA +V+++M+ PD ML C+ G+V E F+ + +E
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL-RE 718
Query: 478 YG---VIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
G VI +A M+ L G LD+A+++ E M
Sbjct: 719 KGTCDVI----SFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 194/477 (40%), Gaps = 63/477 (13%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMF--DEMYKSEIFDLVSWNSMVAAYVQSGDTKS 79
VL+S AV+ +Y G A +F + D++ +N M+ AY ++ +
Sbjct: 476 VLSSTTLA--AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 80 ALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNS 139
AL LF+ M + SL +L + +++ + SG +
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE---AQRILAEMLDSGCKPGCKTYAA 590
Query: 140 LVDMYAKCGMMHEASKVFERMQKKDV----VSWNAMVTGYSHIGMFENALTLFEQMREEN 195
++ Y + G++ +A ++E M+K V V + +++ G++ GM E A+ F M E
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
++ + + +++I Y++ G EA V+ +M+ P+ S+LS CA +G + +
Sbjct: 651 VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAE 710
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKC------KSISVARAIFDSVAPKDRNV 309
+ CD VI+ MY ++I VA + +S D
Sbjct: 711 SI----FNALREKGTCD-----VISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD--C 759
Query: 310 VTWTAMIGGYAQHGEANDSLELFSQMLKQDR-------------------------SVKP 344
++ ++ YA G+ ++ ELF +ML + + S
Sbjct: 760 TSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQ 819
Query: 345 NAFTISCSLMACARLAALRSGREIHAYVLRN--QYDSDVL----YVANCLIDTYSKSGDI 398
A+ + L A A L S ++AY L + + S + + N +I TYS SGDI
Sbjct: 820 TAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDI 879
Query: 399 DVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITF 451
D+A + M+ K + V+ L+ YG G E +V + L P F
Sbjct: 880 DMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLF 936
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 211/510 (41%), Gaps = 43/510 (8%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYK-SEIFDLVSWNSMVAAYVQSGDTKSA--LGLFQKM 87
N++V Y G +A ++ +M K + V +N ++ + D+ + L L +K
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 394
Query: 88 W-EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAK 146
+ EM+ + L+ +++ + S G + V + G D + +++
Sbjct: 395 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 454
Query: 147 CGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVS 202
M A +FE M++ DV ++ MV + G+ E A F +MRE +VV+
Sbjct: 455 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 514
Query: 203 WSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTI 262
++ +I Y + A +F M S PN VT +L+ G G + E C
Sbjct: 515 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV----EKACQIF 570
Query: 263 KCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQH 322
+ + C ++ +DMY K + R NVVT+ A++ G+ +
Sbjct: 571 ERM-----CGSKDV----PDVDMYFKQYDDNSERP----------NVVTYGALLDGFCKS 611
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVL 382
++ +L M + +PN + ++ L +E+ + + + + L
Sbjct: 612 HRVEEARKLLDAMSME--GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA-TL 668
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEE 438
Y + LID Y K D+A V M N V +T +I G G+ +EA K+ +
Sbjct: 669 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 728
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAG 498
M ++G P+ +T+ M+ G ++ ++ M + GV P Y ++D + G
Sbjct: 729 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNG 787
Query: 499 RLDKAMKLIEGMPMKPGQVVWVALLSGCRK 528
LD A L+E M Q W +G RK
Sbjct: 788 ALDVAHNLLEEMK----QTHWPTHTAGYRK 813
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 221/512 (43%), Gaps = 74/512 (14%)
Query: 40 CGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLD 98
C LD A + + EM + + + ++ +S +G + A F + EM+ D
Sbjct: 385 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA---FSVIREMIGQGFIPD 441
Query: 99 AVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFE 158
+ VL + + R GL DV+ +VD + K G++ +A K F
Sbjct: 442 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 501
Query: 159 RMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKG 214
M++ +VV++ A++ Y A LFE M E ++V++S +I G+ + G
Sbjct: 502 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 561
Query: 215 LGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQD 274
+A +F +M C SK +V V + + K+ D ++
Sbjct: 562 QVEKACQIFERM--CGSK--DVPDVDM-----------YFKQYD----------DNSERP 596
Query: 275 ELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELF 332
++ A++D + K + AR + D+++ + + N + + A+I G + G+ +++ E+
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656
Query: 333 SQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTY 392
++M + +T S + ++ ++ + +L N +V+ +ID
Sbjct: 657 TEM--SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE-MIDGL 713
Query: 393 SKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDG 448
K G D A + M+ K N V++T++I G+GM G+ E +++ E M +G+ P+
Sbjct: 714 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 773
Query: 449 ITFLVMLYACSHSGMVDEG-------------------IKYFSCMSKEY----GVI---- 481
+T+ V++ C +G +D K +KE+ G++
Sbjct: 774 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 833
Query: 482 -----PGEEHYACMVDLLGRAGRLDKAMKLIE 508
P Y ++D L +A RL+ A++L+E
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 865
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 205/511 (40%), Gaps = 86/511 (16%)
Query: 138 NSLVDMYAKCGMMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
N L+ + K + AS + M + D + +G + ALTL E
Sbjct: 198 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET--- 254
Query: 194 ENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCAS------ 247
EN D V ++ +I+G + L EA++ +M++ PN VT +LL GC +
Sbjct: 255 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 314
Query: 248 -------------------VGALIHGKET---HCYTIKCILNYDRCDQ-DELLVINAIID 284
+L+H T H Y K + +C +V N +I
Sbjct: 315 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 374
Query: 285 MY------TKCKSISVARAIFDS-----VAPKDRNVVTWTAMIGGYAQHGEANDSLELFS 333
C + +A + V NV ++T + G+ + +
Sbjct: 375 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL---CSAGKYEKAFSVIR 431
Query: 334 QMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYS 393
+M+ Q P+ T S L + + + + R +DV Y ++D++
Sbjct: 432 EMIGQ--GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV-YTYTIMVDSFC 488
Query: 394 KSGDIDVARVVFDNMKH----KNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGI 449
K+G I+ AR F+ M+ N V++T+LI Y + A ++FE M EG LP+ +
Sbjct: 489 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 548
Query: 450 TFLVMLYACSHSGMVDEGIKYFS--CMSKEYGVI-------------PGEEHYACMVDLL 494
T+ ++ +G V++ + F C SK+ + P Y ++D
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 608
Query: 495 GRAGRLDKAMKLIEGMPM---KPGQVVWVALLSGCRKHENVKLGEFAANKLLELESENDG 551
++ R+++A KL++ M M +P Q+V+ AL+ G K+G+ + ++ E G
Sbjct: 609 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL-----CKVGKLDEAQEVKTEMSEHG 663
Query: 552 ------SYTLLSNIYANARRWKDVTRIRSLM 576
+Y+ L + Y +R +++ S M
Sbjct: 664 FPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/518 (20%), Positives = 205/518 (39%), Gaps = 103/518 (19%)
Query: 22 VLNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSA 80
VLN ++CNA ++ A +F+EM + + D+ ++ MV ++ ++G + A
Sbjct: 448 VLN---YLCNA--------SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 496
Query: 81 LGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSL 140
F +M E V + V+ ++ A+ + ++ + G ++ ++L
Sbjct: 497 RKWFNEMRE---VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 553
Query: 141 VDMYAKCGMMHEASKVFERM-QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
+D + K G + +A ++FERM KDV + M+ F+Q + + +
Sbjct: 554 IDGHCKAGQVEKACQIFERMCGSKDV----------PDVDMY------FKQYDDNSERPN 597
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALI------- 252
VV++ ++ G+ + EA + M +PN++ +L+ G VG L
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 253 ----HGKETHCYTIKCILN-YDRCDQDEL-----------------LVINAIIDMYTKCK 290
HG YT +++ Y + + +L ++ +ID K
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 291 SISVARAIFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFT 348
A + + K NVVT+TAMI G+ G+ LEL +M + V PN T
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM--GSKGVAPNYVT 775
Query: 349 ISCSLMACARLAALRSGRE----------------------------IHAYVLRNQYDSD 380
+ C + AL I + L ++ D
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 835
Query: 381 ----VLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAV------SWTSLITGYGMHGQGE 430
L V LID K+ +++A + + + +A ++ SLI + + E
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 895
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
A ++F EM K+G++P+ +F ++ + + E +
Sbjct: 896 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 239/542 (44%), Gaps = 72/542 (13%)
Query: 36 MYGRCGA--LDHARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSALGLFQKMWEMVD 92
++G C A +D A +F +M E F V ++ ++ + S AL L ++M E
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE--- 351
Query: 93 VDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHE 152
I+ + + ++ + S + +++ G + GL +V N+L++ Y K GM+ +
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 153 ASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIA 208
A V E M+ + + ++N ++ GY + + A+ + +M E + DVV+++++I
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLID 470
Query: 209 GYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNY 268
G + G A + M P++ T S+ + +L K C L +
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM------IDSLCKSKRVE---EACDL-F 520
Query: 269 DRCDQD----ELLVINAIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQH 322
D +Q +++ A+ID Y K + A + + + K+ N +T+ A+I G
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 323 GEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAY-----VLRNQY 377
G+ ++ L +M+K ++P T+S + RL L+ G HAY +L +
Sbjct: 581 GKLKEATLLEEKMVKI--GLQP---TVSTDTILIHRL--LKDGDFDHAYSRFQQMLSSGT 633
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHKNAVS-----WTSLITGYGMHGQGEEA 432
D + I TY + G + A + M+ +N VS ++SLI GYG GQ A
Sbjct: 634 KPDA-HTYTTFIQTYCREGRLLDAEDMMAKMR-ENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 433 VKVFEEMRKEGLLPDGITFLVMLY----------------ACSHSGMV--DEGIKYFSCM 474
V + MR G P TFL ++ C+ S M+ D ++ M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 475 SKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP----MKPGQVVWVALLSGC---R 527
E+ V P + Y ++ + G L A K+ + M + P ++V+ ALLS C +
Sbjct: 752 V-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 528 KH 529
KH
Sbjct: 811 KH 812
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 181/417 (43%), Gaps = 55/417 (13%)
Query: 138 NSLVDMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMRE 193
N+L++ A+ G++ E +V+ M + ++ ++N MV GY +G E A ++ E
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 194 ENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIH 253
++ D +++++I GY Q+ A VF +M + NEV LIH
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH----------LIH 296
Query: 254 GKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWT 313
G C+ I+ +D++ K K D P R T+T
Sbjct: 297 G--------LCVARR----------IDEAMDLFVKMKD--------DECFPTVR---TYT 327
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
+I +++L L +M ++ +KPN T + + + RE+ +L
Sbjct: 328 VLIKSLCGSERKSEALNLVKEM--EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 374 RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQG 429
+V+ N LI+ Y K G I+ A V + M+ + N ++ LI GY
Sbjct: 386 EKGLMPNVI-TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CKSNV 443
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC 489
+A+ V +M + +LPD +T+ ++ SG D + S M+ + G++P + Y
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDQWTYTS 502
Query: 490 MVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHENVKLGEFAANKLL 543
M+D L ++ R+++A L + + K P V++ AL+ G K V K+L
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 228/542 (42%), Gaps = 61/542 (11%)
Query: 36 MYGRCGALDHARQMFD---EMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKM----W 88
M C ++ A + D +M K E F+L + ++ Y ++ + GL +M
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFEL-KYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCG 148
EM++ + + + ++ + +G+ Q V +GL D F SL+ Y +
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 149 MMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWS 204
+ A KVF M +++ V++ ++ G + A+ LF +M+++ V +++
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 205 TVIAGYAQKGLGYEALNVFRQMQSCHSKPN----EVTLVSLLSGCASVGA-------LIH 253
+I EALN+ ++M+ KPN V + SL S C A L
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 254 GKETHCYTIKCILN--------YDRCDQDELL----------VINAIIDMYTKC---KSI 292
G + T ++N D D EL+ N +I Y K K++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 293 SVARAIFD-SVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISC 351
V + + V P +VVT+ ++I G + G + + L S M DR + P+ +T +
Sbjct: 448 GVLNKMLERKVLP---DVVTYNSLIDGQCRSGNFDSAYRLLSLM--NDRGLVPDQWTYTS 502
Query: 352 SLMACARLAALRSGREIHAYVLRNQYDSD-VLYVANCLIDTYSKSGDIDVARVVFDNMKH 410
+ + + + ++ + + + + V+Y A LID Y K+G +D A ++ + M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA--LIDGYCKAGKVDEAHLMLEKMLS 560
Query: 411 K----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDE 466
K N++++ +LI G G+ +EA + E+M K GL P T ++++ G D
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 467 GIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALL 523
F M G P Y + R GRL A ++ M + P + +L+
Sbjct: 621 AYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 524 SG 525
G
Sbjct: 680 KG 681
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 171/430 (39%), Gaps = 70/430 (16%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMY-KSEIFDLVSWNSMVAAYVQSGDTKSAL 81
+N NV + A++ Y + G +D A M ++M K+ + + +++N+++ G K A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L +KM V+ GL V L+
Sbjct: 588 LLEEKM--------------------------------------VKIGLQPTVSTDTILI 609
Query: 142 DMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
K G A F++M K D ++ + Y G +A + +MRE +
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
D+ ++S++I GY G A +V ++M+ +P++ T +SL+ + + +GK+
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK---HLLEMKYGKQK 726
Query: 258 HCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIG 317
+ C ++ + ++++ + + + SV P N ++ +I
Sbjct: 727 GSEP-------ELCAMSNMMEFDTVVEL--------LEKMVEHSVTP---NAKSYEKLIL 768
Query: 318 GYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY 377
G + G + ++F M +++ + P+ + L C +L ++ ++ +
Sbjct: 769 GICEVGNLRVAEKVFDHM-QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 378 DSDVLYVANCLIDTYSKSGDIDVARVVFDNM----KHKNAVSWTSLITGYGMHGQGEEAV 433
L LI K G+ + VF N+ +++ ++W +I G G G E
Sbjct: 828 LPQ-LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFY 886
Query: 434 KVFEEMRKEG 443
++F M K G
Sbjct: 887 ELFNVMEKNG 896
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 198/469 (42%), Gaps = 29/469 (6%)
Query: 46 ARQMFDEMYKSEIFDLV-SWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVN 104
A +FD+M + + +V ++N+++ G A L KM V + +D V+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM---VGKGLHIDVVTYGT 266
Query: 105 VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK- 163
++ MG + + + DV + ++++D K G +A +F M +K
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 164 ---DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEAL 220
+V ++N M+ G+ G + +A L M E I DV++++ +I+ ++G +EA
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 221 NVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVIN 280
+ +M P+ VT S++ G K +D +++ N
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM----------FDLMASPDVVTFN 436
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
IID+Y + K + + ++ + N T+ +I G+ + N + +LF +M+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
V P+ T + L L E+ + ++ D D + N +I K +
Sbjct: 497 --GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV-AYNIIIHGMCKGSKV 553
Query: 399 DVARVVFDNMK----HKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
D A +F ++ + ++ +I+G+ +A +F +M+ G PD T+ +
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKA 503
+ C +G +D+ I+ S M G+ MV L GRLDK+
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNG--FSGDAFTIKMVADLITDGRLDKS 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/548 (21%), Positives = 227/548 (41%), Gaps = 53/548 (9%)
Query: 30 CNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMW 88
CN V+ ++ R D A ++ +M I ++ S+N ++ + +L F K+
Sbjct: 109 CNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 89 EMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDV-------------- 134
++ Q D V+ +L + G+ V +G E V
Sbjct: 169 KL---GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 135 -FVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFE 189
N+L++ G + EA+ + +M K DVV++ +V G +G ++AL L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 190 QMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVG 249
+M E +I+ DVV +S +I + G +A +F +M PN T ++ G S G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 250 ALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DR 307
+ I+ +N D +L NA+I K + A + D + +
Sbjct: 346 RWSDAQRLLRDMIEREINPD------VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 308 NVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGRE 367
+ VT+ +MI G+ +H +D+ +F M P+ T + + R + G +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 368 IHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNM-KH---KNAVSWTSLITGY 423
+ + R ++ N LI + + +++ A+ +F M H + ++ L+ G+
Sbjct: 454 LLREISRRGLVANTT-TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 424 GMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPG 483
+ + EEA+++FE ++ + D + + ++++ VDE F C +GV P
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF-CSLPIHGVEPD 571
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGCRKHENVKLGEFAAN 540
+ Y M+ + A L M +P + L+ GC +K GE +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC-----LKAGEI--D 624
Query: 541 KLLELESE 548
K +EL SE
Sbjct: 625 KSIELISE 632
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/507 (21%), Positives = 221/507 (43%), Gaps = 35/507 (6%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLF 84
N++ N ++ + C L + F ++ K D+V++N+++ AL LF
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 85 QKM-----WEMVDVDIQLDAVSLVNVLPAFASM--GSWWFGKQVHGFA-----VRSGLFE 132
M E V + Q+ + L V+ F ++ G G+ + A V GL
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 133 DVFVGNSLVDMYAKCGMMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLF 188
DV ++V+ K G A + +M+ K DVV ++A++ G +A LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 189 EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASV 248
+M E+ I +V +++ +I G+ G +A + R M P+ +T +L+S
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 249 GALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRN 308
G L ++ C RC + + N++I + K A+ +FD +A D
Sbjct: 380 GKLFEAEKL------CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD-- 431
Query: 309 VVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREI 368
VVT+ +I Y + ++ ++L ++ + R + N T + + + L + +++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISR--RGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 369 HAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYG 424
++ + D + N L+ + ++ ++ A +F+ ++ + V++ +I G
Sbjct: 490 FQEMISHGVCPDTI-TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 425 MHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYA-CSHSGMVDEGIKYFSCMSKEYGVIPG 483
+ +EA +F + G+ PD T+ VM+ C S + D + + K+ G P
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK--MKDNGHEPD 606
Query: 484 EEHYACMVDLLGRAGRLDKAMKLIEGM 510
Y ++ +AG +DK+++LI M
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 157/365 (43%), Gaps = 14/365 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
+ +V + +A++ + G A+ +F EM + I ++ ++N M+ + G A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
L + +M++ +I D ++ ++ A G + +++ + +F D NS++
Sbjct: 352 RLLR---DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 142 DMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+ K +A +F+ M DVV++N ++ Y + + L ++ + +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+++T+I G+ + A ++F++M S P+ +T LL G L E
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE----- 523
Query: 262 IKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGGY 319
+ ++ + D D + N II K + A +F S+ + +V T+ MI G+
Sbjct: 524 LFEVIQMSKIDLDT-VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDS 379
+D+ LF +M +D +P+ T + + C + + E+ + + N +
Sbjct: 583 CGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 380 DVLYV 384
D +
Sbjct: 641 DAFTI 645
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 192/433 (44%), Gaps = 60/433 (13%)
Query: 60 DLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGK 119
DL S+ ++ + + AL + KM ++ + V+ ++L F +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKL---GYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 120 QVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGY 175
+ V+SG +V V N+L+D K G ++ A ++ M+KK DVV++N ++TG
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 176 SHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
+ G + +A + M + +I DVV+++ +I + ++G EA ++++M PN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 236 VTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVA 295
VT S+++G G L K+T
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKT-------------------------------------- 303
Query: 296 RAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSL 353
FD +A K NVVT+ +I G+ + ++ ++LF +M + FT + +
Sbjct: 304 ---FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNADIFTYNTLI 358
Query: 354 MACARLAALRSGREIHAYVLRNQYDSDVLYVANC-LIDTYSKSGDIDVARVVFDNM---- 408
++ LR +I +++ + D+ + +C L+ +G+I+ A V FD+M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDI--ITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 409 KHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGI 468
K+ V++ +I G + E+A ++F + EG+ PD T+ +M+ +G E
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 469 KYFSCMSKEYGVI 481
+ M KE G+I
Sbjct: 477 ELIRRM-KEEGII 488
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 165/356 (46%), Gaps = 24/356 (6%)
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
+V + ++T + + F+ + L+ +M I D+ S++ +I + + AL +
Sbjct: 608 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 667
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQ----DELLVIN 280
+M +P+ VTL SLL+G G + + D D +++ N
Sbjct: 668 KMMKLGFRPSIVTLGSLLNG------FCQGNRFQ----EAVSLVDSMDGFGFVPNVVIYN 717
Query: 281 AIIDMYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQ 338
+I+ K + ++ A +F + K + VT+ +I G + G D+ L M+K
Sbjct: 718 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK- 776
Query: 339 DRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDI 398
R + PN + + + L R ++ ++R +V + N LI+ + G +
Sbjct: 777 -RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV-FTYNSLINGFCIHGCL 834
Query: 399 DVARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVM 454
A+ +FD M K + V++ +LITG+ + E+ +K+F EM +GL+ D T+ +
Sbjct: 835 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 894
Query: 455 LYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM 510
++ +G ++ K F+ M + GV P Y ++D L G+++KA+ ++E +
Sbjct: 895 IHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 949
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 17/321 (5%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLF 84
NV + N V+ + L++A ++F M K I D V++N++++ SG A L
Sbjct: 712 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 771
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+ +MV I + + ++ F G+ + ++ +R + +VF NSL++ +
Sbjct: 772 R---DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 828
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
G + +A +F+ M K DVV++N ++TG+ E+ + LF +M + + D
Sbjct: 829 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 888
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCY 260
+++T+I GY Q G A VF +M C P+ VT LL + +GK
Sbjct: 889 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN-----NGKIEKAL 943
Query: 261 TIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTAMIGG 318
+ L D D ++ N II + + A +F S+ K + + + MI G
Sbjct: 944 VMVEDLQKSEMDVD-IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 1002
Query: 319 YAQHGEANDSLELFSQMLKQD 339
+ G ++ +L +M K+D
Sbjct: 1003 LCRKGLQREADKLCRRM-KED 1022
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 194/470 (41%), Gaps = 81/470 (17%)
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F EM+ V VL A M + ++ G+ D++ L+
Sbjct: 593 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 652
Query: 144 YAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
+ +C + A + +M K +V+ +++ G+ F+ A++L + M +
Sbjct: 653 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 712
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
VV ++TVI G + AL VF M+ + + VT +L+SG ++ G
Sbjct: 713 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG---------- 762
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK-DRNVVTWTAMIGG 318
+ AR + D V K D NV+ +TA+I
Sbjct: 763 ------------------------------RWTDAARLLRDMVKRKIDPNVIFFTALIDT 792
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
+ + G ++ L+ +M++ RSV PN FT + +L +G IH + +Y
Sbjct: 793 FVKEGNLLEARNLYKEMIR--RSVVPNVFTYN----------SLINGFCIHGCLGDAKYM 840
Query: 379 SDVLYVANC---------LIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGM 425
D++ C LI + KS ++ +F M ++ +A ++ +LI GY
Sbjct: 841 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 900
Query: 426 HGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSK---EYGVIP 482
G+ A KVF M G+ PD +T+ ++L ++G +++ + + K + +I
Sbjct: 901 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 960
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSG-CRK 528
Y ++ L R +L +A L + +KP + ++ ++SG CRK
Sbjct: 961 ----YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 1006
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGLF 84
NVF N+++ + G L A+ MFD M F D+V++N+++ + +S + + LF
Sbjct: 817 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 876
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
EM + DA + ++ + G ++V V G+ D+ N L+D
Sbjct: 877 ---CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 933
Query: 145 AKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
G + +A + E +QK D++++N ++ G + A LF + + ++ D
Sbjct: 934 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 993
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
+++ T+I+G +KGL EA + R+M+ P+E
Sbjct: 994 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1028
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 178/410 (43%), Gaps = 56/410 (13%)
Query: 165 VVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
+V + ++T +++ +E + ++M I D+ S++ +I + + AL+V
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 225 QMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIID 284
+M +P+ VT SLL G V + +++ IL + ++V N +ID
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRI-----GDAFSL-VILMVKSGYEPNVVVYNTLID 184
Query: 285 MYTKCKSISVARAIFDSVAPKD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSV 342
K +++A + + + K +VVT+ ++ G G +D+ + M+K RS+
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK--RSI 242
Query: 343 KPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD-SDVLYVANCLIDTYSKSGDIDVA 401
P+ T + + + L +E++ ++++ D ++V Y N +I+ G + A
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY--NSIINGLCMHGRLYDA 300
Query: 402 RVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEG-------------- 443
+ FD M K N V++ +LI+G+ +E +K+F+ M EG
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 444 ---------------------LLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
+ PD IT ++L+ +G ++ + F M + I
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI- 419
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSGCRKH 529
G Y M+ L +A +++KA +L +P +KP + ++ G K+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 126/307 (41%), Gaps = 46/307 (14%)
Query: 44 DHARQMFDEMYKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVSLV 103
D AR + D M +S D+V++ +++ +V+ G+ A L++ EM+ + + V+
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK---EMIQSSVDPNNVTYN 285
Query: 104 NVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ-- 161
+++ G + K+ G F +V N+L+ + K M+ E K+F+RM
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 162 --KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEA 219
D+ ++N ++ GY +G AL +F M + D+++ ++ G G A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 220 LNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVI 279
L F M+ G + +IHG C D+ +
Sbjct: 406 LVKFDDMRESEK----------YIGIVAYNIMIHG---------------LCKADK---V 437
Query: 280 NAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQD 339
+++ R + V P R T+T MI G ++G ++ EL +M ++
Sbjct: 438 EKAWELF--------CRLPVEGVKPDAR---TYTIMILGLCKNGPRREADELIRRMKEEG 486
Query: 340 RSVKPNA 346
+ NA
Sbjct: 487 IICQMNA 493
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 204/501 (40%), Gaps = 69/501 (13%)
Query: 26 NVFVCNAVVTMYGRCGALDHARQMFDEMYK-SEIFDLVSWNSMVAAYVQSGDTKSALGLF 84
N++ + ++ + RC L A ++ K + +++++++ G AL L
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 85 QKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFE-----DVFVGNS 139
+M EM + +LVN G GK+ + + E +
Sbjct: 182 DRMVEMGHKPDLITINTLVN--------GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 140 LVDMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREEN 195
++++ K G A ++ +M+++ D V ++ ++ G G +NA LF +M +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 196 IELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGK 255
I ++++++ +I G+ G + + R M PN VT L+ G L +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 256 ETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWT 313
E H I R + + ++ID + K + A + D + K D N+ T+
Sbjct: 354 ELHKEMIH------RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 314 AMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVL 373
+I GY + +D LELF +M L
Sbjct: 408 ILINGYCKANRIDDGLELFRKM------------------------------------SL 431
Query: 374 RNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQG 429
R V Y N LI + + G ++VA+ +F M + N V++ L+ G +G+
Sbjct: 432 RGVVADTVTY--NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 430 EEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYAC 489
E+A+++FE++ K + D + ++++ ++ VD+ F C GV PG + Y
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF-CSLPLKGVKPGVKTYNI 548
Query: 490 MVDLLGRAGRLDKAMKLIEGM 510
M+ L + G L +A L M
Sbjct: 549 MIGGLCKKGPLSEAELLFRKM 569
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 146/364 (40%), Gaps = 78/364 (21%)
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDEL- 276
+A+++FR M P + L S A +T Y + L C Q EL
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIA---------KTKQYDLVLAL----CKQMELK 117
Query: 277 ------LVINAIIDMYTKCKSISVARAIFDSVAP--KDRNVVTWTAMIGGYAQHGEANDS 328
++ +I+ + +C+ + +A + + + N +T++ +I G G +++
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 329 LELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQY------DSDVL 382
LEL +M++ KP+ TI+ + SG+E A +L ++ + V
Sbjct: 178 LELVDRMVEMGH--KPDLITINTLVNGLCL-----SGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 383 YVANCLIDTYSKSGDIDVARVVFDNMKHKN----AVSWTSLITGYGMHGQGEEAVKVFEE 438
Y +++ KSG +A + M+ +N AV ++ +I G HG + A +F E
Sbjct: 231 Y--GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 439 MRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKE--------------------- 477
M +G+ + IT+ +++ ++G D+G K M K
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 478 -------------YGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVA 521
G+ P Y ++D + LDKA ++++ M K P +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 522 LLSG 525
L++G
Sbjct: 409 LING 412
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 53/376 (14%)
Query: 162 KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALN 221
+ D+V++ +++ GY H E+A+ LF+Q+ + +VV+++T+I + A+
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 222 VFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELLVINA 281
+F QM + S+PN VT +L++G +G D LL
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRW-------------------GDAAWLLR--- 247
Query: 282 IIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRS 341
DM + + P NV+T+TA+I + + G+ ++ EL++ M++ S
Sbjct: 248 --DMMKR------------RIEP---NVITFTALIDAFVKVGKLMEAKELYNVMIQM--S 288
Query: 342 VKPNAFTISCSLMACARLAALRSGREIHAYVLRNQ-YDSDVLYVANCLIDTYSKSGDIDV 400
V P+ FT + L R++ + RN Y ++V+Y LI + KS ++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT--LIHGFCKSKRVED 346
Query: 401 ARVVFDNMKHK----NAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLY 456
+F M K N +++T LI GY + G+ + A +VF +M PD T+ V+L
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 457 ACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKLIEGM---PMK 513
+G V++ + F M K I Y ++ + + G+++ A L + MK
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 514 PGQVVWVALLSG-CRK 528
P + + ++SG CR+
Sbjct: 466 PNVITYTTMISGFCRR 481
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 55/369 (14%)
Query: 129 GLFEDVFVGNSLVDMYAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENA 184
G +V +L+ K ++ A ++F +M + +VV++NA+VTG IG + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 185 LTLFEQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSG 244
L M + IE +V++++ +I + + G EA ++ M P+ T SL++G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 245 CASVGALIHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAP 304
G L ++ ++ + C +E ++ +I + K K + IF ++
Sbjct: 303 LCMYGLLDEARQMF-----YLMERNGCYPNE-VIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 305 KD--RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAAL 362
K N +T+T +I GY G + + E+F+QM ++
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM------------------------SSR 392
Query: 363 RSGREIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTS 418
R+ +I Y N L+D +G ++ A ++F+ M+ + N V++T
Sbjct: 393 RAPPDIRTY--------------NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 419 LITGYGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEY 478
+I G G+ E+A +F + +G+ P+ IT+ M+ G++ E F M KE
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM-KED 497
Query: 479 GVIPGEEHY 487
G +P E Y
Sbjct: 498 GFLPNESVY 506
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 147/306 (48%), Gaps = 21/306 (6%)
Query: 43 LDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQKMWEMVDVDIQLDAVS 101
L+HA ++F++M ++V++N++V + G A L + +M+ I+ + ++
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR---DMMKRRIEPNVIT 260
Query: 102 LVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQ 161
++ AF +G K+++ ++ ++ DVF SL++ G++ EA ++F M+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 162 KK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVVSWSTVIAGYAQKGLGY 217
+ + V + ++ G+ E+ + +F +M ++ + + ++++ +I GY G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 218 EALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYTIKCILNYDRCDQDELL 277
A VF QM S + P+ T LL G G + I Y R + ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM--------IFEYMRKREMDIN 432
Query: 278 VINAIIDMYTKCKSISVARA--IFDSVAPK--DRNVVTWTAMIGGYAQHGEANDSLELFS 333
++ I + CK V A +F S+ K NV+T+T MI G+ + G +++ LF
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 334 QMLKQD 339
+M K+D
Sbjct: 493 KM-KED 497
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSALGL 83
+VF +++ G LD ARQMF M ++ + + V + +++ + +S + + +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F +EM + + ++ ++ + +G ++V D+ N L+D
Sbjct: 351 F---YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 144 YAKCGMMHEASKVFERMQKKD----VVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
G + +A +FE M+K++ +V++ ++ G +G E+A LF + + ++ +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNE 235
V++++T+I+G+ ++GL +EA ++F++M+ PNE
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSEIF-DLVSWNSMVAAYVQSGDTKSAL 81
+ NV A++ + + G L A+++++ M + ++ D+ ++ S++ G A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLV 141
+F + M + V ++ F G ++ + G+ + L+
Sbjct: 314 QMF---YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 142 DMYAKCGMMHEASKVFERMQKK----DVVSWNAMVTGYSHIGMFENALTLFEQMREENIE 197
Y G A +VF +M + D+ ++N ++ G G E AL +FE MR+ ++
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 198 LDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKET 257
+++V+++ +I G + G +A ++F + S KPN +T +++SG G LIH ++
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG-LIHEADS 489
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 216/518 (41%), Gaps = 78/518 (15%)
Query: 31 NAVVTMYGRCGALDHARQMFDEM----YKSEIFDLVSWNSMVAAYVQSGDTKSALGLFQK 86
NA++ R ++ A + +M Y+S D V+++ ++ + +S S + L +
Sbjct: 201 NALIGACARNNDIEKALNLIAKMRQDGYQS---DFVNYSLVIQSLTRSNKIDSVMLL--R 255
Query: 87 MWEMVDVD-IQLDAVSLVN-VLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
+++ ++ D ++LD V LVN ++ FA G Q+ G A +GL S++
Sbjct: 256 LYKEIERDKLELD-VQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 145 AKCGMMHEASKVFERMQ----KKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDV 200
A G EA +FE ++ K ++NA++ GY G ++A ++ +M + + D
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 201 VSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHG----KE 256
++S +I Y G A V ++M++ +PN LL+G G KE
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 257 THCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPK--DRNVVTWTA 314
+K DR N +ID + K + A FD + + + + VTW
Sbjct: 435 MKSIGVKP----DRQ------FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 315 MIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLR 374
+I + +HG + E+F M + R P A T
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAM--ERRGCLPCATTY------------------------- 517
Query: 375 NQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK----NAVSWTSLITGYGMHGQGE 430
N +I++Y D + + MK + N V+ T+L+ YG G+
Sbjct: 518 -----------NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 431 EAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACM 490
+A++ EEM+ GL P + ++ A + G+ ++ + F M+ + G+ P +
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSL 625
Query: 491 VDLLGRAGRLDKAMKLIEGMP---MKPGQVVWVALLSG 525
++ G R +A +++ M +KP V + L+
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 184/468 (39%), Gaps = 110/468 (23%)
Query: 138 NSLVDMYAKCGMMHEASKVFERMQK----KDVVSWNAMVTGYSHIGMFENA--LTLFEQM 191
N+L+ A+ + +A + +M++ D V+++ ++ + ++ L L++++
Sbjct: 201 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 260
Query: 192 REENIELDVVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGAL 251
+ +ELDV + +I G+A+ G +AL + Q+ TLVS++S A G
Sbjct: 261 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 320
Query: 252 IHGKETHCYTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDS-----VAPKD 306
+ A A+F+ + P+
Sbjct: 321 LE-----------------------------------------AEALFEELRQSGIKPRT 339
Query: 307 RNVVTWTAMIGGYAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGR 366
R + A++ GY + G D+ + S+M K R V P+
Sbjct: 340 R---AYNALLKGYVKTGPLKDAESMVSEMEK--RGVSPDE-------------------- 374
Query: 367 EIHAYVLRNQYDSDVLYVANCLIDTYSKSGDIDVARVVFDNMK----HKNAVSWTSLITG 422
H Y L LID Y +G + AR+V M+ N+ ++ L+ G
Sbjct: 375 --HTYSL--------------LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 423 YGMHGQGEEAVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIP 482
+ G+ ++ +V +EM+ G+ PD + V++ +D + F M E G+ P
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEP 477
Query: 483 GEEHYACMVDLLGRAGRLDKAMKLIEGMPMK---PGQVVWVALLSGCRKHE---NVK--L 534
+ ++D + GR A ++ E M + P + +++ E ++K L
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 535 GEFAANKLLELESENDGSYTLLSNIYANARRWKDVTRIRSLMKHTGIK 582
G+ + +L N ++T L ++Y + R+ D MK G+K
Sbjct: 538 GKMKSQGILP----NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 224/518 (43%), Gaps = 69/518 (13%)
Query: 23 LNSNVFVCNAVVTMYGRCGALDHARQMFDEMYKSE-IFDLVSWNSMVAAYVQSGDTKSAL 81
+ +F V+ + +D A + +M K + + V + +++ + + AL
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 82 GLFQKMWEMVDVDIQLDAVSLVNVLPAFASMGSW-WFGKQVHGFAVRSGLFEDVFVGNSL 140
L ++M+ M V DA + +V+ K V+ +R +D+ G L
Sbjct: 273 QLLEEMFLMGCVP---DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG-YL 328
Query: 141 VDMYAKCGMMHEASKVFERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQM-REENIELD 199
++ K G + A +F R+ K ++V +N ++ G+ G ++A + M I D
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 200 VVSWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHC 259
V +++++I GY ++GL AL V M++ KPN + L+ G +G
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK--------- 439
Query: 260 YTIKCILNYDRCDQDELLVINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGGY 319
I + Y +S D + P N V + +I +
Sbjct: 440 ----------------------IDEAYNVLNEMSA-----DGLKP---NTVGFNCLISAF 469
Query: 320 AQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHA-YVLRNQYD 378
+ +++E+F +M + + KP+ +T + + + ++ HA ++LR+
Sbjct: 470 CKEHRIPEAVEIFREMPR--KGCKPDVYTFNSLISGLCEVDEIK-----HALWLLRDMIS 522
Query: 379 SDVL---YVANCLIDTYSKSGDIDVARVVFDNMKHKNA----VSWTSLITGYGMHGQGEE 431
V+ N LI+ + + G+I AR + + M + + +++ SLI G G+ ++
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 432 AVKVFEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMV 491
A +FE+M ++G P I+ +++ SGMV+E +++ M G P + ++
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLI 641
Query: 492 DLLGRAGRLDKAMKLI-----EGMPMKPGQVVWVALLS 524
+ L RAGR++ + + EG+P P V + L+S
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIP--PDTVTFNTLMS 677
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 43/200 (21%)
Query: 25 SNVFVCNAVVTMYGRCGALDHARQMFDEM-YKSEIFDLVSWNSMVAAYVQSGDTKSALGL 83
+N N ++ + R G + AR++ +EM ++ D +++NS++ ++G+ A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 84 FQKMWEMVDVDIQLDAVSLVNVLPAFASMGSWWFGKQVHGFAVRSGLFEDVFVGNSLVDM 143
F+KM +R G N L++
Sbjct: 587 FEKM--------------------------------------LRDGHAPSNISCNILING 608
Query: 144 YAKCGMMHEASKVFERM----QKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELD 199
+ GM+ EA + + M D+V++N+++ G G E+ LT+F +++ E I D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 200 VVSWSTVIAGYAQKGLGYEA 219
V+++T+++ + G Y+A
Sbjct: 669 TVTFNTLMSWLCKGGFVYDA 688
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 233/512 (45%), Gaps = 70/512 (13%)
Query: 31 NAVVTMYGRCGALDHARQMFDEMYKSEI-FDLVSWNSMVAAYVQSGDTKSALGLFQKMWE 89
N +++++ + ++ A F EM + D VS+ +++ A+ + A GL E
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA---E 427
Query: 90 MVDVDIQLD--AVSLVNVLPAFASM--GSW-WFGKQVHGFAVRSGLFEDVFVGNSLVDMY 144
M D ++++D S + + A M SW WF + F V + + + N +D Y
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR----FHVAGNMSSEGYSAN--IDAY 481
Query: 145 AKCGMMHEASKVF---ERMQKKDVVSWNAMVTGYSHIGMFENALTLFEQMREENIELDVV 201
+ G + EA +VF + + K+ V+ +N M+ Y E A LFE M + D
Sbjct: 482 GERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 202 SWSTVIAGYAQKGLGYEALNVFRQMQSCHSKPNEVTLVSLLSGCASVGALIHGKETHCYT 261
+++T++ A + ++ +M+ + + +++S +G L +E +
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY--- 598
Query: 262 IKCILNYDRCDQDELL---VINAIIDMYTKCKSISVARAIFDSVAPKDRNVVTWTAMIGG 318
K ++ Y+ + D ++ +INA D +++S A+ ++ P N V + ++I
Sbjct: 599 -KEMVEYN-IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG--NSVIYNSLIKL 654
Query: 319 YAQHGEANDSLELFSQMLKQDRSVKPNAFTISCSLMACARLAALRSGREIHAYVLRNQYD 378
Y + G +++ ++ ++L+ SC+ + QY
Sbjct: 655 YTKVGYLDEAEAIYRKLLQ------------SCN---------------------KTQYP 681
Query: 379 SDVLYVANCLIDTYSKSGDIDVARVVFDNMKHK---NAVSWTSLITGYGMHGQGEEAVKV 435
+Y +NC+I+ YS+ + A +FD+MK + N ++ ++ Y +G+ EEA ++
Sbjct: 682 D--VYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 436 FEEMRKEGLLPDGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLG 495
++MR+ +L D +++ +L + G E ++ F M G+ P + + + +L
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS-GIQPDDSTFKSLGTILM 798
Query: 496 RAGRLDKAMKLIEGM---PMKPGQVVWVALLS 524
+ G KA++ IE + +K G +W++ LS
Sbjct: 799 KLGMSKKAVRKIEEIRKKEIKRGLELWISTLS 830
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 181/450 (40%), Gaps = 56/450 (12%)
Query: 115 WWFGKQVHGFAVRSGLFEDVFVGNSLVDMYAKCGMMHEASKVFERMQK----KDVVSWNA 170
W + + + +R G+ +L+D+Y+K G+ A +M K D V+
Sbjct: 203 WRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGI 262
Query: 171 MVTGYSHIGMFENALTLF------EQMREENIELDVVSWSTVIAGYAQKGLGYEALNVFR 224
++ Y F+ A F E + ++ L +++T+I Y + G EA F+
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 225 QMQSCHSKPNEVTLVSLL------SGCASVGALIHGKETHCYTIKCILNYDRCDQDELLV 278
+M P VT +++ V +L+ + HC +
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC-------------APDTRT 369
Query: 279 INAIIDMYTKCKSISVARAIF-----DSVAPKDRNVVTWTAMIGGYAQHGEANDSLELFS 333
N +I ++TK I A A F D + P + V++ ++ ++ ++ L +
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDGLKP---DPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 334 QMLKQDRSVKPNAFTISCSLMACARLAALRSG----REIHAYVLRNQYDSDVLYVANCLI 389
+M D +V+ + +T S L + H V N S Y AN I
Sbjct: 427 EM--DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH--VAGNM--SSEGYSAN--I 478
Query: 390 DTYSKSGDIDVARVVF---DNMKHKNAVSWTSLITGYGMHGQGEEAVKVFEEMRKEGLLP 446
D Y + G + A VF + + + + +I YG+ E+A ++FE M G+ P
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 447 DGITFLVMLYACSHSGMVDEGIKYFSCMSKEYGVIPGEEHYACMVDLLGRAGRLDKAMKL 506
D T+ ++ + + M +G Y M +E G + Y ++ + G+L+ A ++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 507 IEGM---PMKPGQVVWVALLSGCRKHENVK 533
+ M ++P VV+ L++ NV+
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627