Jatropha Genome Database

JcCB0143591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143591.10 - phase: 0 /partial
         (230 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65110.1 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);...   280   5e-76
AT5G65110.2 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);...   280   7e-76
AT1G06310.1 | Symbols: ACX6 | ACX6 (ACYL-COA OXIDASE 6); FAD bin...    67   8e-12
AT1G06290.1 | Symbols: ACX3, ATACX3 | ACX3 (ACYL-COA OXIDASE 3);...    67   1e-11

>AT5G65110.1 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);
           acyl-CoA oxidase | chr5:26009821-26012482 REVERSE
          Length = 692

 Score =  280 bits (717), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 135/190 (71%), Positives = 160/190 (84%), Gaps = 8/190 (4%)

Query: 13  KDPNPTAEDETQ-IVVSRRIQRLSFHLTPIPCSLYDSNQLGMVE----CAKAAKLVVNTD 67
           ++ NP  E+E+  ++ +RRIQRLS HL+P   SL  S  L +V+     A++ KL VN +
Sbjct: 5   REKNPMTEEESDGLIAARRIQRLSLHLSP---SLTPSPSLPLVQTETCSARSKKLDVNGE 61

Query: 68  KLSLYMRGKHREIQEKVFAYFNSRPELQTPVEIAKDDYRELCWRQLLGLVREAGIRPFRY 127
            LSLYMRGKH +IQEK+F +FNSRP+LQTP+EI+KDD+RELC  QL+GLVREAG+RPFRY
Sbjct: 62  ALSLYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRY 121

Query: 128 VADDPVKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPG 187
           VADDP KYFAI+EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHR+KYFDGIDNL+Y G
Sbjct: 122 VADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTG 181

Query: 188 CFAMTELHHG 197
           CFAMTELHHG
Sbjct: 182 CFAMTELHHG 191


>AT5G65110.2 | Symbols: ACX2, ATACX2 | ACX2 (ACYL-COA OXIDASE 2);
           acyl-CoA oxidase | chr5:26010060-26012482 REVERSE
          Length = 646

 Score =  280 bits (715), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 135/190 (71%), Positives = 160/190 (84%), Gaps = 8/190 (4%)

Query: 13  KDPNPTAEDETQ-IVVSRRIQRLSFHLTPIPCSLYDSNQLGMVE----CAKAAKLVVNTD 67
           ++ NP  E+E+  ++ +RRIQRLS HL+P   SL  S  L +V+     A++ KL VN +
Sbjct: 5   REKNPMTEEESDGLIAARRIQRLSLHLSP---SLTPSPSLPLVQTETCSARSKKLDVNGE 61

Query: 68  KLSLYMRGKHREIQEKVFAYFNSRPELQTPVEIAKDDYRELCWRQLLGLVREAGIRPFRY 127
            LSLYMRGKH +IQEK+F +FNSRP+LQTP+EI+KDD+RELC  QL+GLVREAG+RPFRY
Sbjct: 62  ALSLYMRGKHIDIQEKIFDFFNSRPDLQTPIEISKDDHRELCMNQLIGLVREAGVRPFRY 121

Query: 128 VADDPVKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPG 187
           VADDP KYFAI+EAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHR+KYFDGIDNL+Y G
Sbjct: 122 VADDPEKYFAIMEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTG 181

Query: 188 CFAMTELHHG 197
           CFAMTELHHG
Sbjct: 182 CFAMTELHHG 191


>AT1G06310.1 | Symbols: ACX6 | ACX6 (ACYL-COA OXIDASE 6); FAD
           binding / acyl-CoA dehydrogenase/ acyl-CoA oxidase/
           electron carrier/ oxidoreductase/ oxidoreductase, acting
           on the CH-CH group of donors | chr1:1926802-1930227
           FORWARD
          Length = 675

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 40/65 (61%)

Query: 133 VKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPGCFAMT 192
           +K FA+ E  G  D SL  K+GV + LWG +V   GTK+H EK+    ++    GCFAMT
Sbjct: 130 LKKFALYEVCGIYDYSLSAKLGVHFLLWGNAVKFFGTKRHHEKWLKDTEDYVVKGCFAMT 189

Query: 193 ELHHG 197
           EL HG
Sbjct: 190 ELGHG 194


>AT1G06290.1 | Symbols: ACX3, ATACX3 | ACX3 (ACYL-COA OXIDASE 3);
           acyl-CoA oxidase | chr1:1922423-1926002 FORWARD
          Length = 675

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 41/65 (63%)

Query: 133 VKYFAILEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHREKYFDGIDNLEYPGCFAMT 192
           ++  A+LE  G  D S+ IK+GV + LWG +V   GTK+H EK+    ++    GCFAMT
Sbjct: 130 LRKLALLEVCGIYDHSVSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMT 189

Query: 193 ELHHG 197
           EL HG
Sbjct: 190 ELGHG 194