Jatropha Genome Database

JcCB0143221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143221.10 + phase: 0 /pseudo/partial
         (365 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   192   3e-49
AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   192   3e-49
AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   188   5e-48

>AT1G18700.3 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 695

 Score =  192 bits (488), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 158/257 (61%), Gaps = 20/257 (7%)

Query: 124 ATALKNKRLTFAWLDGEAQEKYCLFYLHSETSYDTCGPRRDLSDVPRLFIVRYKRNTTQD 183
           A+A K+KRL+FAWLDGEAQ KYC FY+ SETSYDTCG RR   DVPR+ IVRY RN T+ 
Sbjct: 444 ASAHKSKRLSFAWLDGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATET 503

Query: 184 -NVRGKRNAF-------DDEDADPASQLVARYNGSDETPQIARWIAETISDGETRDLPFF 235
            N   K + +       + +D DPA+QLV  Y+G+ E PQI +W+++ + DG+ R+LPF+
Sbjct: 504 ANAEQKSSKWPKTVWQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFY 563

Query: 236 KIKAPDLVPEDSDPIWSRGAQNILYKSVGVKHWIYRIKSRIYDHMGDPRIGPILLLGALM 295
           + K P+LVPE ++P+     ++ + K+V     +  + +RI D++ DPR+GP LLLGAL+
Sbjct: 564 RAKTPELVPESAEPM-----RSGVPKTVKATQKLLSLWNRIKDYLADPRMGPTLLLGALL 618

Query: 296 SFGAVWLMRS-----QPAHRGQSS--QPSESGXXXXXXXXXXXXXXXXXXXXXXPPSISD 348
           S G VW MRS     QPA   Q S  QP+++                       P SI+D
Sbjct: 619 SAGNVWWMRSRSSTQQPAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITD 678

Query: 349 IEPKDAYQMPMSDSDSN 365
            EPKDA Q+  S SDS+
Sbjct: 679 NEPKDAVQILSSGSDSD 695


>AT1G18700.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443046 FORWARD
          Length = 700

 Score =  192 bits (488), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 158/257 (61%), Gaps = 20/257 (7%)

Query: 124 ATALKNKRLTFAWLDGEAQEKYCLFYLHSETSYDTCGPRRDLSDVPRLFIVRYKRNTTQD 183
           A+A K+KRL+FAWLDGEAQ KYC FY+ SETSYDTCG RR   DVPR+ IVRY RN T+ 
Sbjct: 449 ASAHKSKRLSFAWLDGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATET 508

Query: 184 -NVRGKRNAF-------DDEDADPASQLVARYNGSDETPQIARWIAETISDGETRDLPFF 235
            N   K + +       + +D DPA+QLV  Y+G+ E PQI +W+++ + DG+ R+LPF+
Sbjct: 509 ANAEQKSSKWPKTVWQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFY 568

Query: 236 KIKAPDLVPEDSDPIWSRGAQNILYKSVGVKHWIYRIKSRIYDHMGDPRIGPILLLGALM 295
           + K P+LVPE ++P+     ++ + K+V     +  + +RI D++ DPR+GP LLLGAL+
Sbjct: 569 RAKTPELVPESAEPM-----RSGVPKTVKATQKLLSLWNRIKDYLADPRMGPTLLLGALL 623

Query: 296 SFGAVWLMRS-----QPAHRGQSS--QPSESGXXXXXXXXXXXXXXXXXXXXXXPPSISD 348
           S G VW MRS     QPA   Q S  QP+++                       P SI+D
Sbjct: 624 SAGNVWWMRSRSSTQQPAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITD 683

Query: 349 IEPKDAYQMPMSDSDSN 365
            EPKDA Q+  S SDS+
Sbjct: 684 NEPKDAVQILSSGSDSD 700


>AT1G18700.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:6437591-6443814 FORWARD
          Length = 705

 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/249 (44%), Positives = 153/249 (61%), Gaps = 20/249 (8%)

Query: 124 ATALKNKRLTFAWLDGEAQEKYCLFYLHSETSYDTCGPRRDLSDVPRLFIVRYKRNTTQD 183
           A+A K+KRL+FAWLDGEAQ KYC FY+ SETSYDTCG RR   DVPR+ IVRY RN T+ 
Sbjct: 449 ASAHKSKRLSFAWLDGEAQNKYCFFYVQSETSYDTCGTRRAPIDVPRILIVRYHRNATET 508

Query: 184 -NVRGKRNAF-------DDEDADPASQLVARYNGSDETPQIARWIAETISDGETRDLPFF 235
            N   K + +       + +D DPA+QLV  Y+G+ E PQI +W+++ + DG+ R+LPF+
Sbjct: 509 ANAEQKSSKWPKTVWQSEADDVDPAAQLVVSYDGTAEIPQIIKWLSKMVDDGDNRNLPFY 568

Query: 236 KIKAPDLVPEDSDPIWSRGAQNILYKSVGVKHWIYRIKSRIYDHMGDPRIGPILLLGALM 295
           + K P+LVPE ++P+     ++ + K+V     +  + +RI D++ DPR+GP LLLGAL+
Sbjct: 569 RAKTPELVPESAEPM-----RSGVPKTVKATQKLLSLWNRIKDYLADPRMGPTLLLGALL 623

Query: 296 SFGAVWLMRS-----QPAHRGQSS--QPSESGXXXXXXXXXXXXXXXXXXXXXXPPSISD 348
           S G VW MRS     QPA   Q S  QP+++                       P SI+D
Sbjct: 624 SAGNVWWMRSRSSTQQPAQTNQPSPNQPADNVEEKKKKERKREQRRRNAKEEEVPASITD 683

Query: 349 IEPKDAYQM 357
            EPKDA Q+
Sbjct: 684 NEPKDAVQI 692