Jatropha Genome Database
- JcCB0142841.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0142841.10 + phase: 2 /pseudo/partial
(139 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34890.1 | Symbols: ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENA... 182 5e-47
AT4G34900.1 | Symbols: ATXDH2, XDH2 | XDH2 (XXANTHINE DEHYDROGEN... 161 1e-40
AT3G43600.1 | Symbols: AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyd... 62 1e-10
AT5G20960.2 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSI... 61 2e-10
AT5G20960.1 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSI... 61 2e-10
AT4G02180.1 | Symbols: | DC1 domain-containing protein | chr4:9... 56 6e-09
AT2G27150.2 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3)... 55 1e-08
AT2G27150.1 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3)... 55 1e-08
AT1G04580.1 | Symbols: AAO4, ATAO-4, ATAO2 | AAO4 (ARABIDOPSIS A... 55 2e-08
>AT4G34890.1 | Symbols: ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENASE
1); xanthine dehydrogenase | chr4:16618736-16624983
REVERSE
Length = 1361
Score = 182 bits (462), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 95/109 (87%)
Query: 31 GWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKD 90
G L T GPG YKIPSIND+PF VSLLKG+PN KAIHSSKAVGEPPFFLAS+VFFAIK+
Sbjct: 1253 GSLLTCGPGNYKIPSINDMPFNLNVSLLKGNPNTKAIHSSKAVGEPPFFLASSVFFAIKE 1312
Query: 91 AIKAARAEVGHHEWFPLDNPATPERIRMACLDEFTAPFINSDYRPKLSV 139
AIKAAR EVG +WFPL++PATPERIRMAC DEF+APF+NSD+ P LSV
Sbjct: 1313 AIKAARTEVGLTDWFPLESPATPERIRMACFDEFSAPFVNSDFYPNLSV 1361
>AT4G34900.1 | Symbols: ATXDH2, XDH2 | XDH2 (XXANTHINE DEHYDROGENASE
2); FAD binding / catalytic/ electron carrier/ iron ion
binding / iron-sulfur cluster binding / metal ion binding
/ oxidoreductase/ xanthine dehydrogenase |
chr4:16625688-16631306 REVERSE
Length = 1353
Score = 161 bits (408), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 95/109 (87%)
Query: 31 GWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKD 90
G L T GPG+YKIPSIND+PF+ VSLLKG+PN KAIHSSKAVGEPPFFLA++ FFAIK+
Sbjct: 1245 GSLLTCGPGSYKIPSINDMPFQLNVSLLKGNPNAKAIHSSKAVGEPPFFLAASAFFAIKE 1304
Query: 91 AIKAARAEVGHHEWFPLDNPATPERIRMACLDEFTAPFINSDYRPKLSV 139
AIKAAR+EVG WFPL+ PATPERIRMAC DEF+APF NSD+ PKLSV
Sbjct: 1305 AIKAARSEVGLTNWFPLETPATPERIRMACFDEFSAPFANSDFCPKLSV 1353
>AT3G43600.1 | Symbols: AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyde
oxidase | chr3:15512778-15517375 REVERSE
Length = 1321
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 30 QGWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIK 89
+G L T YKIP+++ +P +F V +L G + K + SSKA GEPP LA++V A +
Sbjct: 1204 EGLLLTDSTWTYKIPTVDTIPKQFNVEILNGGCHEKRVLSSKASGEPPLLLAASVHCATR 1263
Query: 90 DAIKAARAEV--------GHHEWFPLDNPATPERIRMAC 120
A+K AR ++ F L PAT ++ C
Sbjct: 1264 QAVKEARKQLCMWKGENGSSGSAFQLPVPATMPVVKELC 1302
>AT5G20960.2 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSIS
ALDEHYDE OXIDASE 1); aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr5:7116783-7122338
FORWARD
Length = 1368
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 31 GWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKD 90
G + T YKIP+++ +P +F V +L + + SSKA GEPP LA++V A++
Sbjct: 1252 GLVVTDSTWTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRA 1311
Query: 91 AIKAARAEV--------GHHEWFPLDNPATPERIRMAC 120
A+K AR ++ G +F L PAT ++ C
Sbjct: 1312 AVKEARKQILSWNSNKQGTDMYFELPVPATMPIVKEFC 1349
>AT5G20960.1 | Symbols: AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSIS
ALDEHYDE OXIDASE 1); aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr5:7116783-7122338
FORWARD
Length = 1368
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 31 GWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAIKD 90
G + T YKIP+++ +P +F V +L + + SSKA GEPP LA++V A++
Sbjct: 1252 GLVVTDSTWTYKIPTVDTIPRQFNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRA 1311
Query: 91 AIKAARAEV--------GHHEWFPLDNPATPERIRMAC 120
A+K AR ++ G +F L PAT ++ C
Sbjct: 1312 AVKEARKQILSWNSNKQGTDMYFELPVPATMPIVKEFC 1349
>AT4G02180.1 | Symbols: | DC1 domain-containing protein |
chr4:959964-963517 FORWARD
Length = 989
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 102 HEWFPLDNPATPERIRMACLDEFTAPF 128
++WFPLD ATPERIRMAC DEFT+PF
Sbjct: 5 NQWFPLDTLATPERIRMACFDEFTSPF 31
>AT2G27150.2 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3);
abscisic aldehyde oxidase/ aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr2:11601952-11607014
FORWARD
Length = 1332
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 29 DQGWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAI 88
++G + G YKIP+++ +P F V ++ + + SSKA GEPP LA++V A
Sbjct: 1218 EKGLVVQQGTWDYKIPTVDTIPKHFNVEIVNTGHHKNRVLSSKASGEPPLLLAASVHCAT 1277
Query: 89 KDAIKAARAEV-------GHHEWFPLDNPATPERIRMAC 120
+ AI+ AR G F L PAT ++ C
Sbjct: 1278 RSAIREARKHSLSSNFIDGSDSEFELPVPATMPVVKSLC 1316
>AT2G27150.1 | Symbols: AAO3 | AAO3 (Abscisic ALDEHYDE OXIDASE 3);
abscisic aldehyde oxidase/ aldehyde oxidase/
indole-3-acetaldehyde oxidase | chr2:11601952-11607014
FORWARD
Length = 1332
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 29 DQGWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAI 88
++G + G YKIP+++ +P F V ++ + + SSKA GEPP LA++V A
Sbjct: 1218 EKGLVVQQGTWDYKIPTVDTIPKHFNVEIVNTGHHKNRVLSSKASGEPPLLLAASVHCAT 1277
Query: 89 KDAIKAARAEV-------GHHEWFPLDNPATPERIRMAC 120
+ AI+ AR G F L PAT ++ C
Sbjct: 1278 RSAIREARKHSLSSNFIDGSDSEFELPVPATMPVVKSLC 1316
>AT1G04580.1 | Symbols: AAO4, ATAO-4, ATAO2 | AAO4 (ARABIDOPSIS
ALDEHYDE OXIDASE 4); aldehyde oxidase/ aryl-aldehyde
oxidase | chr1:1252212-1257510 REVERSE
Length = 1337
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 29 DQGWLYTSGPGAYKIPSINDVPFKFKVSLLKGHPNVKAIHSSKAVGEPPFFLASAVFFAI 88
+ G + G YKIP+I+ +P +F V +L + + SSKA GEPP +A++V A
Sbjct: 1219 ENGLVNEEGTWDYKIPTIDTIPKQFNVQILNSGHHKNRVLSSKASGEPPLLVAASVHCAT 1278
Query: 89 KDAIKAARAEVGHHEWFPLDN 109
+ AI+ AR + + W +D+
Sbjct: 1279 RSAIREARKQ--YLSWNCIDD 1297