Jatropha Genome Database

JcCB0140211.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0140211.10 - phase: 2 /partial
         (421 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...   677   0.0  
AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...   677   0.0  

>AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21945920-21948070
           FORWARD
          Length = 461

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/373 (83%), Positives = 336/373 (90%)

Query: 49  YQSGFGNSFESEAISGALPRGQNSPLLCPYGLYAEQLSGSSFTSPRKLNQRSWFYRIKPS 108
           YQSGFGN F SEAI+GALP  QNSPLLCPYGLYAEQ+SG+SFTSPRKLNQRSW YR+KPS
Sbjct: 13  YQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72

Query: 109 VTHEPFKPRIPSNEKLASEFDKTNSRTTPTQLRWKPMEIPDSPTDFVDGLYTVCGAGSSF 168
           VTHEPFKPR+P+++KL SEFD +NSRT PTQLRW+P +IPDS  DFVDGL+T+CGAGSSF
Sbjct: 73  VTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSF 132

Query: 169 LRHGFAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLQVTPGEIVVLPQGF 228
           LRHGFAIHMY AN  M + AFCNADGDFL+VPQ GRLWI TECG+L VTPGEI V+PQGF
Sbjct: 133 LRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGF 192

Query: 229 RFAVDLPDGPSRGYACEIFGTHFQLPDLGPIGGNGLAAPRDFLVPKAWFEEASRPGYTII 288
           RF++DLPDG SRGY  EI+G HFQLPDLGPIG NGLAA RDFL P AWFE+  RP YTI+
Sbjct: 193 RFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLRPEYTIV 252

Query: 289 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLFDHSDPSINTVLTAPTD 348
           QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVL DH DPSINTVLTAPTD
Sbjct: 253 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTD 312

Query: 349 KPGVALLDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFIPGAASLHS 408
           KPGVALLDFVIFP RW+VAEHTFRPPYYHRNCMSEFMGLIYG YEAKADGF+PG ASLHS
Sbjct: 313 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHS 372

Query: 409 CMTPHGPDTKTYE 421
           CMTPHGPDT TYE
Sbjct: 373 CMTPHGPDTTTYE 385


>AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21945920-21948070
           FORWARD
          Length = 461

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/373 (83%), Positives = 336/373 (90%)

Query: 49  YQSGFGNSFESEAISGALPRGQNSPLLCPYGLYAEQLSGSSFTSPRKLNQRSWFYRIKPS 108
           YQSGFGN F SEAI+GALP  QNSPLLCPYGLYAEQ+SG+SFTSPRKLNQRSW YR+KPS
Sbjct: 13  YQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72

Query: 109 VTHEPFKPRIPSNEKLASEFDKTNSRTTPTQLRWKPMEIPDSPTDFVDGLYTVCGAGSSF 168
           VTHEPFKPR+P+++KL SEFD +NSRT PTQLRW+P +IPDS  DFVDGL+T+CGAGSSF
Sbjct: 73  VTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSF 132

Query: 169 LRHGFAIHMYTANKSMDNCAFCNADGDFLIVPQKGRLWITTECGKLQVTPGEIVVLPQGF 228
           LRHGFAIHMY AN  M + AFCNADGDFL+VPQ GRLWI TECG+L VTPGEI V+PQGF
Sbjct: 133 LRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGF 192

Query: 229 RFAVDLPDGPSRGYACEIFGTHFQLPDLGPIGGNGLAAPRDFLVPKAWFEEASRPGYTII 288
           RF++DLPDG SRGY  EI+G HFQLPDLGPIG NGLAA RDFL P AWFE+  RP YTI+
Sbjct: 193 RFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLRPEYTIV 252

Query: 289 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLFDHSDPSINTVLTAPTD 348
           QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVL DH DPSINTVLTAPTD
Sbjct: 253 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTD 312

Query: 349 KPGVALLDFVIFPSRWVVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKADGFIPGAASLHS 408
           KPGVALLDFVIFP RW+VAEHTFRPPYYHRNCMSEFMGLIYG YEAKADGF+PG ASLHS
Sbjct: 313 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHS 372

Query: 409 CMTPHGPDTKTYE 421
           CMTPHGPDT TYE
Sbjct: 373 CMTPHGPDTTTYE 385