Jatropha Genome Database

JcCB0139821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0139821.10 + phase: 0 /pseudo/partial
         (353 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family prote...   549   e-157

>AT1G55090.1 | Symbols:  | carbon-nitrogen hydrolase family protein
           | chr1:20554857-20558188 FORWARD
          Length = 725

 Score =  549 bits (1415), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 263/309 (85%), Positives = 287/309 (92%)

Query: 13  VASLRGSISSFQEQASCKTRVSSIAAPFNLCQPFNLQISLSTPLKIDYHSPEEEIAFGPG 72
           VASLRGSISSFQEQASCK +VSS+A P  L Q FNL+++LS+P KI YHSP+EEIAFGP 
Sbjct: 277 VASLRGSISSFQEQASCKVKVSSVAVPCRLTQSFNLKMTLSSPKKIIYHSPQEEIAFGPA 336

Query: 73  CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRY 132
           CW+WDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIA GDEQVKADA RIG Y
Sbjct: 337 CWMWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIAKGDEQVKADANRIGNY 396

Query: 133 TNGQFPTDSKEFAKRIFYTVFMGSENSSEATRQRAKVLANEIGSWHLDVSIDGVVSALLS 192
            NGQFPTDSKEFAKRIFYTVFMGSENSSE T++R+K LA+EIG+WHLDV IDGVVSA+LS
Sbjct: 397 ANGQFPTDSKEFAKRIFYTVFMGSENSSEETKRRSKQLADEIGAWHLDVCIDGVVSAVLS 456

Query: 193 LFQTLTGKRPRYKVDGGSDVENLGLQNIQARIRMVLAFMLASLLPWVHNKSGFYLVLGSS 252
           LFQT+TGKRPRYKVDGGS+ ENLGLQNIQAR+RMVLAFMLASLLPWVH+K GFYLVLGSS
Sbjct: 457 LFQTVTGKRPRYKVDGGSNAENLGLQNIQARMRMVLAFMLASLLPWVHSKPGFYLVLGSS 516

Query: 253 NVDEGLRGYLTKYDCSSADINPIGSISKQDLRAFLRWAAIHLGYSSLAEVESAPPTAELE 312
           NVDEGLRGYLTKYDCSSADINPIGSISK DLR FL+WAA +LGY SLAE+E+APPTAELE
Sbjct: 517 NVDEGLRGYLTKYDCSSADINPIGSISKMDLRLFLKWAATNLGYPSLAEIEAAPPTAELE 576

Query: 313 PIRSNYSQV 321
           PIRS+YSQ+
Sbjct: 577 PIRSDYSQL 585