Jatropha Genome Database
- JcCB0138981.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0138981.10 + phase: 0
(317 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 221 6e-58
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 221 6e-58
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 218 4e-57
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 211 6e-55
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 174 6e-44
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 173 1e-43
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 149 2e-36
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 140 1e-33
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 139 3e-33
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 136 2e-32
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 132 3e-31
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 127 7e-30
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 125 3e-29
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 122 3e-28
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 121 6e-28
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 121 6e-28
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 120 1e-27
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 117 8e-27
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 117 8e-27
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 112 3e-25
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 109 2e-24
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 109 2e-24
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 107 1e-23
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 103 1e-22
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 100 1e-21
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 97 1e-20
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 97 2e-20
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 94 8e-20
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 94 1e-19
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 92 4e-19
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 92 5e-19
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 91 7e-19
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 86 4e-17
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 85 5e-17
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 81 1e-15
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 69 3e-12
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 64 1e-10
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 64 1e-10
AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 62 7e-10
AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 62 7e-10
AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DN... 61 8e-10
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 57 1e-08
AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID INDUC... 57 2e-08
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 56 3e-08
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 56 3e-08
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 56 3e-08
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 54 9e-08
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 54 9e-08
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 54 9e-08
AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);... 51 9e-07
AT1G34170.3 | Symbols: | transcription factor | chr1:12443578-1... 51 1e-06
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 51 1e-06
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 51 1e-06
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 51 1e-06
AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);... 50 3e-06
AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);... 49 3e-06
AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);... 49 3e-06
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 145/242 (59%), Gaps = 41/242 (16%)
Query: 78 RILTAKDFPSVVTQSHRVXXXXXXXXXXXXCVVGAISGTKRAAEPVSNEGGSPTSVSQVV 137
R+LTAKDFPSV G+KRAA+ S+ G SP SQVV
Sbjct: 44 RLLTAKDFPSV--------------------------GSKRAADSASHAGSSPPRSSQVV 77
Query: 138 GWPPIRAYRINSLVNQ--AKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXXXX 195
GWPPI ++R+NSLVN K++R +
Sbjct: 78 GWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-------- 129
Query: 196 XFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLL 255
F+KVNMDGV IGRKVDLNAH SYE LAQTLE+MFFR+ P G++G Q T +LL
Sbjct: 130 -FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNP--GTVGL--TSQFTKPLRLL 184
Query: 256 DGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQERNGRQRCK 315
DGSSEFVLTYEDKEGDWMLVGDVPW MF+ SVKRLR+M+TSEANGLA R QE N RQR +
Sbjct: 185 DGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQ 244
Query: 316 PI 317
P+
Sbjct: 245 PV 246
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 145/242 (59%), Gaps = 41/242 (16%)
Query: 78 RILTAKDFPSVVTQSHRVXXXXXXXXXXXXCVVGAISGTKRAAEPVSNEGGSPTSVSQVV 137
R+LTAKDFPSV G+KRAA+ S+ G SP SQVV
Sbjct: 44 RLLTAKDFPSV--------------------------GSKRAADSASHAGSSPPRSSQVV 77
Query: 138 GWPPIRAYRINSLVNQ--AKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXXXX 195
GWPPI ++R+NSLVN K++R +
Sbjct: 78 GWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-------- 129
Query: 196 XFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLL 255
F+KVNMDGV IGRKVDLNAH SYE LAQTLE+MFFR+ P G++G Q T +LL
Sbjct: 130 -FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNP--GTVGL--TSQFTKPLRLL 184
Query: 256 DGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQERNGRQRCK 315
DGSSEFVLTYEDKEGDWMLVGDVPW MF+ SVKRLR+M+TSEANGLA R QE N RQR +
Sbjct: 185 DGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQ 244
Query: 316 PI 317
P+
Sbjct: 245 PV 246
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 146/243 (60%), Gaps = 42/243 (17%)
Query: 78 RILTAKDFPSVVTQSHRVXXXXXXXXXXXXCVVGAISGTKRAAEPVSNEGGSP-TSVSQV 136
R+LTAKDFPSV G+KRAA+ S+ G SP S SQV
Sbjct: 44 RLLTAKDFPSV--------------------------GSKRAADSASHAGSSPPRSSSQV 77
Query: 137 VGWPPIRAYRINSLVNQ--AKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXXX 194
VGWPPI ++R+NSLVN K++R +
Sbjct: 78 VGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG------- 130
Query: 195 XXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKL 254
F+KVNMDGV IGRKVDLNAH SYE LAQTLE+MFFR+ P G++G Q T +L
Sbjct: 131 --FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNP--GTVGL--TSQFTKPLRL 184
Query: 255 LDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQERNGRQRC 314
LDGSSEFVLTYEDKEGDWMLVGDVPW MF+ SVKRLR+M+TSEANGLA R QE N RQR
Sbjct: 185 LDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRK 244
Query: 315 KPI 317
+P+
Sbjct: 245 QPV 247
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/247 (50%), Positives = 140/247 (56%), Gaps = 42/247 (17%)
Query: 73 WGECGRILTAKDFPSVVTQSHRVXXXXXXXXXXXXCVVGAISGTKRAAEPVSNEGGSPTS 132
W E GRILTAKDFPSV G+KR+AE S++G SP
Sbjct: 33 WKERGRILTAKDFPSV--------------------------GSKRSAESSSHQGASPPR 66
Query: 133 VSQVVGWPPIRAYRINSLVNQA--KASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXX 190
SQVVGWPPI +R+NSLVN KA+R
Sbjct: 67 SSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM-------KVNP 119
Query: 191 XXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTN 250
FVKVNMDGV IGRKVD+ AH SYE LAQTLEEMFF T T ++
Sbjct: 120 KVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC-------REKVK 172
Query: 251 ASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQERNG 310
+LLDGSS+FVLTYEDKEGDWMLVGDVPW MF+ SVKRLRIM TSEA+GLAPR QE+
Sbjct: 173 PLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKD 232
Query: 311 RQRCKPI 317
RQR P+
Sbjct: 233 RQRNNPV 239
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 114/191 (59%), Gaps = 21/191 (10%)
Query: 113 ISGTKRAAEPVSNEGGSPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXX 172
I+G KR A+ ++ G QVVGWPPIR YR+NS+VNQAKAS
Sbjct: 72 IAGIKRTADSMAATSG------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQ---- 121
Query: 173 XXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFR 232
+ FVKV MDG+PIGRK+DLNAH YE+L+ TLEEMF +
Sbjct: 122 --------AVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLK 173
Query: 233 STPTIGSIGSGEKQQLTNASKLL-DGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLR 291
P +GS + K+L DGSS VLTYEDKEGDWMLVGDVPWGMF+ SV+RLR
Sbjct: 174 --PKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLR 231
Query: 292 IMRTSEANGLA 302
IM+TSEA G A
Sbjct: 232 IMKTSEATGKA 242
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 113/190 (59%), Gaps = 21/190 (11%)
Query: 112 AISGTKRAAEPVSNEGGSPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXX 171
I+G KR A+ ++ G QVVGWPPIR YR+NS+VNQAKAS
Sbjct: 71 VIAGIKRTADSMAATSG------QVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQ--- 121
Query: 172 XXXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFF 231
+ FVKV MDG+PIGRK+DLNAH YE+L+ TLEEMF
Sbjct: 122 ---------AVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFL 172
Query: 232 RSTPTIGSIGSGEKQQLTNASKLL-DGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRL 290
+ P +GS + K+L DGSS VLTYEDKEGDWMLVGDVPWGMF+ SV+RL
Sbjct: 173 K--PKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRL 230
Query: 291 RIMRTSEANG 300
RIM+TSEA G
Sbjct: 231 RIMKTSEATG 240
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 114 SGTKRAAEPVSNEGGSPTSVSQV-VGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXX 172
SGTKR+A+ + T QV VGWPP+R YRINSLVNQAK+
Sbjct: 73 SGTKRSADSSPAAASNATR--QVAVGWPPLRTYRINSLVNQAKS--LATEGGLSSGIQKE 128
Query: 173 XXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFR 232
+ VKV MDGV IGRKVDLNA SY L +TL+ MFF+
Sbjct: 129 TTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQ 188
Query: 233 -STPTIGSIGSGEKQ-QLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRL 290
+P S G K + T SKLLDGSSE+++TY+DK+GDWMLVGDVPW MFL SV RL
Sbjct: 189 IPSPVTRSNTQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRL 248
Query: 291 RIMRTSEANGL 301
RIM+TS G+
Sbjct: 249 RIMKTSIGAGV 259
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 100/181 (55%), Gaps = 30/181 (16%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P + +QVVGWPP+R YR N + NQ S
Sbjct: 71 PPAKAQVVGWPPVRNYRKNVMANQK--------------------------SGEAEEAMS 104
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLT 249
FVKV+MDG P RKVDL + SY+ L+ L +MF S+ T+GS G+
Sbjct: 105 SGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMF--SSFTMGSYGAQGMIDFM 162
Query: 250 NASKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQE 307
N SK++D SSE+V +YEDK+GDWMLVGDVPW MF+ S KRLRIM+ SEA GLAPR E
Sbjct: 163 NESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAME 222
Query: 308 R 308
+
Sbjct: 223 K 223
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 102/186 (54%), Gaps = 22/186 (11%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P + +QVVGWPP+R YR N + Q +S S
Sbjct: 77 PPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEE------------------ASSEKAGNFG 118
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLT 249
VKV+MDG P RKVDL + SY+ L+ L +MF S+ T+G+ G+
Sbjct: 119 GGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMF--SSFTMGNYGAQGMIDFM 176
Query: 250 NASKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQE 307
N SKL++ SSE+V +YEDK+GDWMLVGDVPW MF+ S KRLRIM+ SEA GLAPR E
Sbjct: 177 NESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAME 236
Query: 308 RNGRQR 313
+ + R
Sbjct: 237 KYCKNR 242
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 101/181 (55%), Gaps = 16/181 (8%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P + +QVVGWPP+R++R N + Q + C+
Sbjct: 65 PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVA----- 119
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLT 249
+VKV+MDG P RK+DL + +Y+ L+ L +MF S+ TIG+ G +
Sbjct: 120 -------YVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMF--SSFTIGNYGPQGMKDFM 170
Query: 250 NASKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQE 307
N SKL+D S++V TYEDK+GDWMLVGDVPW MF+ S KR+RIM+ SEA GLAPR E
Sbjct: 171 NESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALE 230
Query: 308 R 308
+
Sbjct: 231 K 231
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 102/184 (55%), Gaps = 24/184 (13%)
Query: 129 SPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXX 188
+P S +QVVGWPPIR++R NS+ A + C
Sbjct: 137 APASKAQVVGWPPIRSFRKNSM---ASSQSQKPGNNSETEEAEAKSGPEQPC-------- 185
Query: 189 XXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGS--GEKQ 246
+VKV+M+G P RK+DL + SY L+ LE+MF S TIG GS G +
Sbjct: 186 -------LYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMF--SCFTIGQFGSHGGCGR 236
Query: 247 QLTNASKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
N S+L D SE+V+TYEDK+ DWMLVGDVPW MF+ S K+LRIM++SEA GLAPR
Sbjct: 237 DGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPR 296
Query: 305 FQER 308
E+
Sbjct: 297 VMEK 300
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 99/182 (54%), Gaps = 37/182 (20%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P + +QVVGWPP+R+YR N +V+ K+S
Sbjct: 77 PPAKAQVVGWPPVRSYRKNVMVSCQKSS-------------------------------- 104
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQ-QL 248
FVKV+MDG P RK+DL + SY+ L+ L MF S+ T+G G E
Sbjct: 105 GGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMF--SSFTMGKHGGEEGMIDF 162
Query: 249 TNASKLLD--GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQ 306
N KL+D S ++V +YEDK+GDWMLVGDVPW MF+ + KRLR+M+ S+A GLAPR
Sbjct: 163 MNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAM 222
Query: 307 ER 308
E+
Sbjct: 223 EK 224
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 98/181 (54%), Gaps = 35/181 (19%)
Query: 134 SQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXX 193
+Q+VGWPP+R+YR N+L K S
Sbjct: 182 AQIVGWPPVRSYRKNTLATTCKNS---------------------------DEVDGRPGS 214
Query: 194 XXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGS---GEKQQL-- 248
FVKV+MDG P RKVDL ++ +Y L+ LE+MF +T T+G GS K L
Sbjct: 215 GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMF--TTFTLGQCGSNGAAGKDMLSE 272
Query: 249 TNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQER 308
T LL+G ++VLTYEDK+GDWMLVGDVPW MF+ K+L+IM+ +A GLAPR E+
Sbjct: 273 TKLKDLLNGK-DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAPRAMEK 331
Query: 309 N 309
+
Sbjct: 332 S 332
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 131 TSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXX 190
T+ VVGWPP+R++R N
Sbjct: 99 TAPGPVVGWPPVRSFRKN------------LASTSSSKLGNESSHGGQINKSDDGEKQVE 146
Query: 191 XXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMF--FRSTPTIGSIGSGEKQQL 248
FVK+NMDGVPIGRKVDLNA+ SYE L+ ++++F + S G GE++ +
Sbjct: 147 TKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPI 206
Query: 249 TNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSE 297
LLDG EF LTYED EGD MLVGDVPW MF++SVKRLR++++SE
Sbjct: 207 IG---LLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 34/186 (18%)
Query: 129 SPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXX 188
+P + +QVVGWPPIR+YR N++ + S
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASST--------------------------SKNTDEVD 192
Query: 189 XXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIG-----SG 243
FVKV+MDG P RKVDL + SY+ L+ LE+MF S T+G G
Sbjct: 193 GKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMF--SCFTLGQCGLHGAQGR 250
Query: 244 EKQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
E+ LL GS EFVLTYEDK+GDWMLVGDVPW +F + ++L+IM+ S++ GLAP
Sbjct: 251 ERMSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAP 309
Query: 304 RFQERN 309
E++
Sbjct: 310 GAVEKS 315
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 34/186 (18%)
Query: 129 SPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXX 188
+P + +QVVGWPPIR+YR N++ + S
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASST--------------------------SKNTDEVD 192
Query: 189 XXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIG-----SG 243
FVKV+MDG P RKVDL + SY+ L+ LE+MF S T+G G
Sbjct: 193 GKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMF--SCFTLGQCGLHGAQGR 250
Query: 244 EKQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
E+ LL GS EFVLTYEDK+GDWMLVGDVPW +F + ++L+IM+ S++ GLAP
Sbjct: 251 ERMSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAP 309
Query: 304 RFQERN 309
E++
Sbjct: 310 GAVEKS 315
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 37/183 (20%)
Query: 134 SQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXX 193
+Q+VGWPP+R+YR N+L K S
Sbjct: 182 AQIVGWPPVRSYRKNTLATTCKNS---------------------------DEVDGRPGS 214
Query: 194 XXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGS---GEKQQL-- 248
FVKV+MDG P RKVDL ++ +Y L+ LE+MF +T T+G GS K L
Sbjct: 215 GALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMF--TTFTLGQCGSNGAAGKDMLSE 272
Query: 249 TNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL--APRFQ 306
T LL+G ++VLTYEDK+GDWMLVGDVPW MF+ K+L+IM+ +A GL APR
Sbjct: 273 TKLKDLLNGK-DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAM 331
Query: 307 ERN 309
E++
Sbjct: 332 EKS 334
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 131 TSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXX 190
T+ VVGWPP+R++R N AS C
Sbjct: 92 TAPGPVVGWPPVRSFRKNL------ASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPK 145
Query: 191 XXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFF------RSTPTIGSIGSGE 244
FVK+NM GVPIGRKVDL+AH SYE L+ T++++F R P+ S E
Sbjct: 146 RQGGM-FVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPS-----SIE 199
Query: 245 KQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSE 297
++ LLDG+ E+ LTYED EGD MLVGDVPW MF++SVKRLR+++TSE
Sbjct: 200 DEKPITG--LLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 96/186 (51%), Gaps = 34/186 (18%)
Query: 129 SPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXX 188
+P + +QVVGWPPIR+YR N++ + S
Sbjct: 159 APAAKAQVVGWPPIRSYRKNTMASST--------------------------SKNTDEVD 192
Query: 189 XXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIG-----SG 243
FVKV+MDG P RKVDL + SY+ L+ LE+MF S T+G G
Sbjct: 193 GKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMF--SCFTLGQCGLHGAQGR 250
Query: 244 EKQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
E+ LL GS EFVLTYEDK+GDWMLVGDVPW +F + ++L+IM+ S++ GL
Sbjct: 251 ERMSEIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLGA 309
Query: 304 RFQERN 309
+ +N
Sbjct: 310 VEKSKN 315
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 80/164 (48%), Gaps = 35/164 (21%)
Query: 73 WGECGRILTAKDFPSVVTQSHRVXXXXXXXXXXXXCVVGAISGTKRAAEPVSNEGGSPTS 132
W E GRILTAKDFPSV G+KR+AE S++G SP
Sbjct: 33 WKERGRILTAKDFPSV--------------------------GSKRSAESSSHQGASPPR 66
Query: 133 VSQVVGWPPIRAYRINSLVNQ--AKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXX 190
SQVVGWPPI +R+NSLVN KA+R
Sbjct: 67 SSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM-------KVNP 119
Query: 191 XXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRST 234
FVKVNMDGV IGRKVD+ AH SYE LAQTLEEMFF T
Sbjct: 120 KVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMT 163
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 98/201 (48%), Gaps = 58/201 (28%)
Query: 108 CVVGAISGTKRAAEPVSNEGGSPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXX 167
C G +S + AE V++ SP + SQVVGWPP+ +YR + +A ++
Sbjct: 47 CESGVVS-SGGDAEKVND---SPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG----- 97
Query: 168 XXXXXXXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLE 227
+VKV+MDGVP RK+DL + Y+ LA L+
Sbjct: 98 -----------------------------YVKVSMDGVPYLRKMDLGSSQGYDDLAFALD 128
Query: 228 EMF-FRSTPTIGSIGSGEKQQLTNASKLLDGSS-EFVLTYEDKEGDWMLVGDVPWGMFLT 285
++F FR L DG + E+V YEDK+GDWML GDVPWGMFL
Sbjct: 129 KLFGFRGIGVA----------------LKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLE 172
Query: 286 SVKRLRIMRTSEAN--GLAPR 304
S KRLRIM+ S+A GL PR
Sbjct: 173 SCKRLRIMKRSDATGFGLQPR 193
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 85/174 (48%), Gaps = 45/174 (25%)
Query: 129 SPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXX 188
SP +Q+VGWPP+R+YR N++ ++ S
Sbjct: 58 SPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGI------------------------ 93
Query: 189 XXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQL 248
+VKV+MDG P RK+DL+ + Y L + LE MF S GE +
Sbjct: 94 --------YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSV--------GEYFER 137
Query: 249 TNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
S+FV TYEDK+GDWML+GDVPW MF+ + KRLRIM+ SEA GL
Sbjct: 138 DGYK-----GSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 84/169 (49%), Gaps = 47/169 (27%)
Query: 134 SQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXXX 193
+Q+VGWPP+R+YR N++ Q K S
Sbjct: 61 AQIVGWPPVRSYRKNNV--QTKKSESEGQGN----------------------------- 89
Query: 194 XXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASK 253
+VKV+MDG P RK+DL + Y L ++LE MF S +G E +
Sbjct: 90 ---YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFS---VGEYFEREGYK------ 137
Query: 254 LLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
S+FV TYEDK+GDWMLVGDVPW MF++S KRLRIM+ SE GL
Sbjct: 138 ----GSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P + +QVVGWPP+R YR N + Q +S S
Sbjct: 77 PPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEE------------------ASSEKAGNFG 118
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLT 249
VKV+MDG P RKVDL + SY+ L+ L +MF S+ T+G+ G+
Sbjct: 119 GGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMF--SSFTMGNYGAQGMIDFM 176
Query: 250 NASKLLD--GSSEFVLTYEDKEGDWMLVGDVPW 280
N SKL++ SSE+V +YEDK+GDWMLVGDVPW
Sbjct: 177 NESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPW 209
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 85/189 (44%), Gaps = 57/189 (30%)
Query: 114 SGTKRAAEPVSNEGGS-PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXX 172
S KR E +E S P + +Q+VGWPP+R+ R N+
Sbjct: 38 SNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKNN----------------------- 74
Query: 173 XXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFR 232
+VKV+MDG P RK+DL + +Y L + LE MF
Sbjct: 75 --------------------NSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMF-- 112
Query: 233 STPTIGSIGSGEKQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRI 292
IG E + S FV TYEDK+GDWMLVGDVPW MF +S KRLRI
Sbjct: 113 -KVMIGEYCEREGYK----------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRI 161
Query: 293 MRTSEANGL 301
M+ S+A L
Sbjct: 162 MKGSDAPAL 170
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 47/172 (27%)
Query: 133 VSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXXXXX 192
V+ VVGWPP+R+ R N L Q K
Sbjct: 46 VAPVVGWPPVRSSRRN-LTAQLKEE---------------------------MKKKESDE 77
Query: 193 XXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNAS 252
+VK+NM+GVPIGRKV+L+A+ +Y+ L+ ++++F +
Sbjct: 78 EKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDS----------------- 120
Query: 253 KLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
D + ++ L YED EGD +LVGDVPW MF+++VKRL +++TS A L+PR
Sbjct: 121 --WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 79/173 (45%), Gaps = 52/173 (30%)
Query: 130 PTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXXXXXXXXXXFCSXXXXXXXX 189
P SQ VGWPP+ +YR N +AS+
Sbjct: 65 PVVKSQAVGWPPVCSYRRKK--NNEEASKAIG---------------------------- 94
Query: 190 XXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLT 249
+VKV+MDGVP RK+DL + SY L LE +F G +G G ++
Sbjct: 95 -------YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLF-------GCLGIGVAKEGK 140
Query: 250 NASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
E+++ YEDK+ DWMLVGDVPW MF S KRLRI++ S+A G
Sbjct: 141 KC--------EYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFG 185
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 85/190 (44%), Gaps = 56/190 (29%)
Query: 112 AISGTKRAAEPVS-NEGGSPTSVSQVVGWPPIRAYRINSLVNQAKASRXXXXXXXXXXXX 170
+ISG KRA+ V + P SQVVGWPP+ +YR + + + K+S
Sbjct: 29 SISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSS------------- 75
Query: 171 XXXXXXXXFCSXXXXXXXXXXXXXXXFVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMF 230
+VKV++DG RK+DL + Y+ LA L+ +F
Sbjct: 76 --------------------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILF 109
Query: 231 FRSTPTIGSIGSGEKQQLTNASKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRL 290
G + K SE V YEDK+GDWML GDVPW MFL S KRL
Sbjct: 110 ------------GCYINFDDTLK----ESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRL 153
Query: 291 RIMRTSEANG 300
RIM+ S G
Sbjct: 154 RIMKRSCNRG 163
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 13/100 (13%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKVNM+GVPIGRK+DL + Y L +TL+ MF SI E++ + N
Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMF------NASILWAEEEDMCN------ 133
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTS 296
VLTY DKEGDWM+VGDVPW MFL++V+RL+I R +
Sbjct: 134 -EKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKVNM+GVPIGRK+DL + Y L TL+ MF SI E++ + +
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMF------NASILWAEEEDMCSEKS--- 134
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMR 294
VLTY DKEGDWM+VGDVPW MFL+SV+RL+I R
Sbjct: 135 ----HVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 13/102 (12%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKV+MDG P RK+DL + +Y L + LE MF T+G E +
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMF---KFTVGEYSEREGYK--------- 123
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEA 298
S FV TYEDK+GDWMLVGDVPW MF +S ++LRIM+ SEA
Sbjct: 124 -GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 17/98 (17%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
FVKV M+GVPIGRK+DL YE+L + L MF SI G + +
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMF------DTSIICGNRDR--------- 118
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMR 294
VLTYEDK+GDWM+VGD+PW MFL +V+RL+I R
Sbjct: 119 --KHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 14/102 (13%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKV MDG+ +GRKV + HGSY TLA LE+MF Q + +L
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF--------------GMQSVSGLRLFQ 139
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEA 298
SEF L Y D+EG W GDVPW F+ SV+RLRI R ++A
Sbjct: 140 MESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKV +DG RKVDL + Y L LE MF + TI + E++
Sbjct: 88 YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF-QGIITICRVTELERK---------- 136
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL 301
EFV TYEDK+GD MLVGDVPW MF+ S KR+R+M+T +A GL
Sbjct: 137 --GEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKVN+DG+ +GRKV L G+Y TLA L +MF Q + +L
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMF--------------GMQTVSGLRLFQ 145
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEA 298
SEF L Y D+EG W VGDVPW F+ SV R+RI R ++A
Sbjct: 146 TESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDA 187
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+VKV MDGV I RKVD+ SYE+L +L MF T
Sbjct: 161 YVKVKMDGVAIARKVDIKLFNSYESLTNSLITMF------------------TEYEDCDR 202
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMR 294
+ + T++ KEGDW+L GDV W +F SV R+ I+R
Sbjct: 203 EDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GVP+GR VDLNA Y L +E++F + L
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF-------------------DIKGELRSR 565
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQER 308
+++ + + D EGD MLVGD PW F VKR+ I E + P Q R
Sbjct: 566 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLR 615
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GVP+GR VDLNA Y L +E++F + L
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF-------------------DIKGELRSR 567
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQER 308
+++ + + D EGD MLVGD PW F VKR+ I E + P Q R
Sbjct: 568 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLR 617
>AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+M G +GR +DL YE L + LEEMF +LL+
Sbjct: 545 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF------------------DIKGELLES 586
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
+ ++ + Y D E D M+VGD PW F V+++ I E L+P+
Sbjct: 587 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 633
>AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 665
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+M G +GR +DL YE L + LEEMF +LL+
Sbjct: 545 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF------------------DIKGELLES 586
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
+ ++ + Y D E D M+VGD PW F V+++ I E L+P+
Sbjct: 587 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 633
>AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1); DNA
binding / transcription factor | chr1:21980414-21984193
FORWARD
Length = 662
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+M G +GR +DL YE L + LEEMF +LL+
Sbjct: 542 TKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMF------------------DIKGELLES 583
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
+ ++ + Y D E D M+VGD PW F V+++ I E L+P+
Sbjct: 584 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 630
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV M G+ +GR VDL SY+ L LEEMF L
Sbjct: 492 TKVQMQGIAVGRAVDLTLLKSYDELIDELEEMF-------------------EIQGQLLA 532
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQ 306
++++ + D EGD ML GD PW F K++ I + E + + +
Sbjct: 533 RDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLK 581
>AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID
INDUCIBLE 33); transcription factor |
chr5:23270024-23270959 FORWARD
Length = 171
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 202 MDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGSSEF 261
++G I +++ L+ HGSY++LA L +MF + S + L+NA + G
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF------VDGADSTDDLDLSNA---IPGH--- 126
Query: 262 VLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIM 293
++ YED E D +L GD+ W F+ KR+RI+
Sbjct: 127 LIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
+KV M G +GR VDL SY+ L + LE+MF GE L
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF---------EIEGE----------LSP 446
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL 301
++ + + D EGD MLVGD PW F K+L I + E +
Sbjct: 447 KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 490
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
+KV M G +GR VDL SY+ L + LE+MF GE L
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF---------EIEGE----------LSP 533
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL 301
++ + + D EGD MLVGD PW F K+L I + E +
Sbjct: 534 KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 577
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
+KV M G +GR VDL SY+ L + LE+MF GE L
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE---------GE----------LSP 554
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL 301
++ + + D EGD MLVGD PW F K+L I + E +
Sbjct: 555 KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+ G+ +GR VDL+ +YE L L+ +F +GE L+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLF---------EFNGE---------LMAP 777
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
++++ Y D+E D MLVGD PW F V+++ I E + P
Sbjct: 778 KKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+ G+ +GR VDL+ +YE L L+ +F +GE L+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLF---------EFNGE---------LMAP 777
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
++++ Y D+E D MLVGD PW F V+++ I E + P
Sbjct: 778 KKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 198 VKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDG 257
KV+ G+ +GR VDL+ +YE L L+ +F +GE L+
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLF---------EFNGE---------LMAP 777
Query: 258 SSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 303
++++ Y D+E D MLVGD PW F V+++ I E + P
Sbjct: 778 KKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNP 823
>AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);
transcription factor | chr1:13108634-13111700 FORWARD
Length = 605
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 19/106 (17%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GV IGR VDL+ Y+ L LE++F + L
Sbjct: 514 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-------------------DLKGQLQAR 554
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPR 304
+++ + + + E D MLVG+ PW F VK++ I E L R
Sbjct: 555 NQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSR 600
>AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 546
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 19/105 (18%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
KV+M GV I R VDL A Y L Q LEE+F + L
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELF-------------------DLKDELR 475
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGL 301
+++ + + + EG MLVGD PW F KR+ I E +
Sbjct: 476 TRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKM 520
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+ KV G +GR +D+N + Y+ L L MF G G E Q
Sbjct: 1040 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF-------GIEGQLEDPQ--------- 1082
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
+S++ L Y D E D +LVGD PW F+ V+ ++I+ ++E ++
Sbjct: 1083 -TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1164
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+ KV G +GR +D+N + Y+ L L MF G G E Q
Sbjct: 1039 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF-------GIEGQLEDPQ--------- 1081
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
+S++ L Y D E D +LVGD PW F+ V+ ++I+ ++E ++
Sbjct: 1082 -TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1165
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 197 FVKVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLD 256
+ KV G +GR +D+N + Y+ L L MF G G E Q
Sbjct: 1040 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF-------GIEGQLEDPQ--------- 1082
Query: 257 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 302
+S++ L Y D E D +LVGD PW F+ V+ ++I+ ++E ++
Sbjct: 1083 -TSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 593
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GV IGR VDL+ Y+ L LE++F + L
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-------------------DIKGQLQTR 555
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMR 294
+++ + + D + D MLVGD PW F VK++ I +
Sbjct: 556 NQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFIQK 591
>AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 606
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GV IGR VDL+ Y+ L LE++F + L
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-------------------DIKGQLQTR 555
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEA 298
+++ + + D +G MLVGD PW F VK++ I E
Sbjct: 556 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 595
>AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 590
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 199 KVNMDGVPIGRKVDLNAHGSYETLAQTLEEMFFRSTPTIGSIGSGEKQQLTNASKLLDGS 258
KV M GV IGR VDL+ Y+ L LE++F + L
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF-------------------DLKGQLQTR 539
Query: 259 SEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEA 298
+++ + + D +G MLVGD PW F VK++ I E
Sbjct: 540 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 579