Jatropha Genome Database

JcCB0138801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0138801.10 + phase: 0 /partial
         (151 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35390.3 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...   196   5e-51
AT2G35390.2 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...   196   6e-51
AT2G35390.1 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /...   185   8e-48
AT1G32380.1 | Symbols:  | ribose-phosphate pyrophosphokinase 2 /...   159   6e-40
AT2G44530.1 | Symbols:  | ribose-phosphate pyrophosphokinase, pu...   127   3e-30
AT2G44530.2 | Symbols:  | ribose-phosphate pyrophosphokinase, pu...   125   1e-29

>AT2G35390.3 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895808-14897581 REVERSE
          Length = 344

 Score =  196 bits (498), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 98/105 (93%)

Query: 47  VHPSVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPA 106
           V   VKCDM E +NVGNG PSIPI+NERTLPKFLESARMEKSVNR +TRLKLFSG+ANPA
Sbjct: 44  VFACVKCDMPESLNVGNGNPSIPIINERTLPKFLESARMEKSVNRTNTRLKLFSGTANPA 103

Query: 107 LSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           L+QEIAWYMGL+LGK+NIKRFADGEIYVQLQESVRGCDVYL+QPT
Sbjct: 104 LAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPT 148


>AT2G35390.2 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895528-14897581 REVERSE
          Length = 403

 Score =  196 bits (497), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 90/105 (85%), Positives = 98/105 (93%)

Query: 47  VHPSVKCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPA 106
           V   VKCDM E +NVGNG PSIPI+NERTLPKFLESARMEKSVNR +TRLKLFSG+ANPA
Sbjct: 44  VFACVKCDMPESLNVGNGNPSIPIINERTLPKFLESARMEKSVNRTNTRLKLFSGTANPA 103

Query: 107 LSQEIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           L+QEIAWYMGL+LGK+NIKRFADGEIYVQLQESVRGCDVYL+QPT
Sbjct: 104 LAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPT 148


>AT2G35390.1 | Symbols:  | ribose-phosphate pyrophosphokinase 1 /
           phosphoribosyl diphosphate synthetase 1 (PRSI) |
           chr2:14895528-14897098 REVERSE
          Length = 352

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 85/97 (87%), Positives = 93/97 (95%)

Query: 55  MAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQEIAWY 114
           M E +NVGNG PSIPI+NERTLPKFLESARMEKSVNR +TRLKLFSG+ANPAL+QEIAWY
Sbjct: 1   MPESLNVGNGNPSIPIINERTLPKFLESARMEKSVNRTNTRLKLFSGTANPALAQEIAWY 60

Query: 115 MGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           MGL+LGK+NIKRFADGEIYVQLQESVRGCDVYL+QPT
Sbjct: 61  MGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPT 97


>AT1G32380.1 | Symbols:  | ribose-phosphate pyrophosphokinase 2 /
           phosphoribosyl diphosphate synthetase 2 (PRS2) |
           chr1:11682033-11684229 FORWARD
          Length = 400

 Score =  159 bits (402), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 92/100 (92%), Gaps = 3/100 (3%)

Query: 52  KCDMAEPVNVGNGKPSIPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQEI 111
           KC++ + +N GN +  +PI+NE T+PKF +S+R+EKSV+RN+T+LKLFSG+ANPALSQEI
Sbjct: 49  KCNLPKALN-GNAR--VPIINETTIPKFFDSSRLEKSVSRNNTKLKLFSGTANPALSQEI 105

Query: 112 AWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           AWYMGLELGK++IKRFADGEIYVQL+ESVRGCDV+L+QPT
Sbjct: 106 AWYMGLELGKVSIKRFADGEIYVQLKESVRGCDVFLVQPT 145


>AT2G44530.1 | Symbols:  | ribose-phosphate pyrophosphokinase,
           putative / phosphoribosyl diphosphate synthetase,
           putative | chr2:18383732-18385974 FORWARD
          Length = 394

 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 1/102 (0%)

Query: 51  VKCDMAEPVNVGNGKPS-IPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQ 109
           +KC+ A+P     G  +   +L   T+P      R+E S+ +N+TRL++FSG+ANP L+Q
Sbjct: 32  LKCNAADPYKFDGGNSAGFHLLTGDTVPASFSRTRLEDSIYQNTTRLRIFSGTANPILAQ 91

Query: 110 EIAWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           EI+ Y+GL+LGKI IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 92  EISCYLGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPT 133


>AT2G44530.2 | Symbols:  | ribose-phosphate pyrophosphokinase,
           putative / phosphoribosyl diphosphate synthetase,
           putative | chr2:18383732-18385974 FORWARD
          Length = 393

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 1/100 (1%)

Query: 53  CDMAEPVNVGNGKPS-IPILNERTLPKFLESARMEKSVNRNSTRLKLFSGSANPALSQEI 111
           C+ A+P     G  +   +L   T+P      R+E S+ +N+TRL++FSG+ANP L+QEI
Sbjct: 33  CNAADPYKFDGGNSAGFHLLTGDTVPASFSRTRLEDSIYQNTTRLRIFSGTANPILAQEI 92

Query: 112 AWYMGLELGKINIKRFADGEIYVQLQESVRGCDVYLLQPT 151
           + Y+GL+LGKI IKRFADGEIYVQLQESVRGCDV+L+QPT
Sbjct: 93  SCYLGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPT 132