Jatropha Genome Database

JcCB0137471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0137471.10 - phase: 0 /partial
         (130 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57050.1 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...   218   1e-57
AT3G57050.2 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...   217   1e-57
AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONIN...    87   3e-18
AT1G33320.1 | Symbols:  | cystathionine gamma-synthase, chloropl...    73   6e-14
AT3G57050.3 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...    60   3e-10

>AT3G57050.1 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21111939-21114521
           REVERSE
          Length = 464

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/129 (79%), Positives = 117/129 (90%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 61
           Q+NA+KIA +L++HP+VKKV YAGLP HPG  LH+SQAKGAGSV SF+TGS+ALSKH+VE
Sbjct: 336 QENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVE 395

Query: 62  TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADL 121
           TTKYFSI VSFGSVKSLISMPCFMSHASIPA VREARGLTEDL+RIS GIEDV+DLI+DL
Sbjct: 396 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDL 455

Query: 122 DYALRTGPL 130
           D A +T PL
Sbjct: 456 DIAFKTFPL 464


>AT3G57050.2 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21111939-21114521
           REVERSE
          Length = 449

 Score =  217 bits (553), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/129 (79%), Positives = 117/129 (90%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVE 61
           Q+NA+KIA +L++HP+VKKV YAGLP HPG  LH+SQAKGAGSV SF+TGS+ALSKH+VE
Sbjct: 321 QENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVE 380

Query: 62  TTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADL 121
           TTKYFSI VSFGSVKSLISMPCFMSHASIPA VREARGLTEDL+RIS GIEDV+DLI+DL
Sbjct: 381 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDL 440

Query: 122 DYALRTGPL 130
           D A +T PL
Sbjct: 441 DIAFKTFPL 449


>AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONINE
           OVERACCUMULATION 1); cystathionine gamma-synthase |
           chr3:39234-41865 REVERSE
          Length = 563

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIV 60
              A ++AE L AHP+V  V Y GLP HP  +L   Q  G G V+SF + G +  +   V
Sbjct: 436 NSTAFRMAEILEAHPKVSHVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDIETTIKFV 495

Query: 61  ETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIAD 120
           ++ K   I  SFG  +S++  P  MS+  +P   R   G+ ++L+R S G+ED  D+ AD
Sbjct: 496 DSLKIPYIAPSFGGCESIVDQPAIMSYWDLPQEERLKYGIKDNLVRFSFGVEDFEDVKAD 555

Query: 121 LDYALR 126
           +  AL 
Sbjct: 556 ILQALE 561


>AT1G33320.1 | Symbols:  | cystathionine gamma-synthase,
           chloroplast, putative / O-succinylhomoserine
           (Thiol)-lyase, putative | chr1:12081009-12083462 FORWARD
          Length = 412

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 2/122 (1%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVETTKY 65
           K+A+ L AHP+V +V Y GLP HP   +   Q  G G ++SF + G L  +   ++  K 
Sbjct: 291 KMAQVLEAHPKVSRVYYLGLPSHPEHLIAKRQMTGIGGLISFEIDGDLKTTIKFIDALKI 350

Query: 66  FSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDYAL 125
             +  SFG  +SL+          IP   R   G  ++L+R S GIED  D+ AD+  AL
Sbjct: 351 PYLAASFGGCESLVDQLA-TGIWDIPREERLKDGFQDNLVRFSFGIEDFEDIKADVLQAL 409

Query: 126 RT 127
            T
Sbjct: 410 ET 411


>AT3G57050.3 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21112392-21114521
           REVERSE
          Length = 378

 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 32/37 (86%)

Query: 2   QDNAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQ 38
           Q+NA+KIA +L++HP+VKKV YAGLP HPG  LH+SQ
Sbjct: 336 QENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQ 372