Jatropha Genome Database
- JcCB0133181.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0133181.10 - phase: 0 /partial
(271 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14210.2 | Symbols: PDS3, PDS, PDE226 | PDS3 (PHYTOENE DESATU... 506 e-144
AT4G14210.1 | Symbols: PDS3, PDS, PDE226 | PDS3 (PHYTOENE DESATU... 506 e-144
AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA... 137 1e-32
AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURA... 137 1e-32
AT3G59050.1 | Symbols: ATPAO3 | ATPAO3 (Polyamine oxidase 3); po... 62 3e-10
AT1G65840.1 | Symbols: ATPAO4, PAO4 | ATPAO4 (ARABIDOPSIS THALIA... 53 2e-07
AT2G43020.1 | Symbols: ATPAO2 | ATPAO2 (Polyamine oxidase 2); am... 53 2e-07
>AT4G14210.2 | Symbols: PDS3, PDS, PDE226 | PDS3 (PHYTOENE
DESATURASE 3); phytoene dehydrogenase |
chr4:8190426-8194769 REVERSE
Length = 566
Score = 506 bits (1303), Expect = e-144, Method: Compositional matrix adjust.
Identities = 235/265 (88%), Positives = 253/265 (95%)
Query: 1 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
CILIALNRFLQEKHGSKMAFLDGNPPERLCMP+VDHI+SLGGEV+LNSRIKK+ELN+DGT
Sbjct: 281 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGT 340
Query: 61 VRSFLLNTGDVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVINVHIWFDR 120
V+SFLL G +E DAYVFA PVDILKLLLPD WKEIPYF KL+KLVGVPVINVHIWFDR
Sbjct: 341 VKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDR 400
Query: 121 KLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDSEIINAT 180
KLKN YDHLLFSRS+LLSVYADMS+TCKEYY PN+SMLELVFAPAEEWISR+DS+II+AT
Sbjct: 401 KLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDAT 460
Query: 181 MKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDY 240
MKEL KLFPDEI+ADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLAGDY
Sbjct: 461 MKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDY 520
Query: 241 TKQKYLASMEGAVLSGKLCAQAIVQ 265
TKQKYLASMEGAVLSGK C+Q+IVQ
Sbjct: 521 TKQKYLASMEGAVLSGKFCSQSIVQ 545
>AT4G14210.1 | Symbols: PDS3, PDS, PDE226 | PDS3 (PHYTOENE
DESATURASE 3); phytoene dehydrogenase |
chr4:8190426-8194769 REVERSE
Length = 566
Score = 506 bits (1302), Expect = e-144, Method: Compositional matrix adjust.
Identities = 235/265 (88%), Positives = 253/265 (95%)
Query: 1 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
CILIALNRFLQEKHGSKMAFLDGNPPERLCMP+VDHI+SLGGEV+LNSRIKK+ELN+DGT
Sbjct: 281 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGT 340
Query: 61 VRSFLLNTGDVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVINVHIWFDR 120
V+SFLL G +E DAYVFA PVDILKLLLPD WKEIPYF KL+KLVGVPVINVHIWFDR
Sbjct: 341 VKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDR 400
Query: 121 KLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDSEIINAT 180
KLKN YDHLLFSRS+LLSVYADMS+TCKEYY PN+SMLELVFAPAEEWISR+DS+II+AT
Sbjct: 401 KLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISRTDSDIIDAT 460
Query: 181 MKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDY 240
MKEL KLFPDEI+ADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSP+EGFYLAGDY
Sbjct: 461 MKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIEGFYLAGDY 520
Query: 241 TKQKYLASMEGAVLSGKLCAQAIVQ 265
TKQKYLASMEGAVLSGK C+Q+IVQ
Sbjct: 521 TKQKYLASMEGAVLSGKFCSQSIVQ 545
>AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
DESATURASE); carotene 7,8-desaturase |
chr3:1342842-1346189 FORWARD
Length = 558
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 28/286 (9%)
Query: 1 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
C+L + F + S + L G+P L PI +I GG + L +++ +
Sbjct: 250 CMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSAD 309
Query: 61 VRSFLLNTG-------DVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVIN 113
+++ +++AD YV A V +K LLP W+E +FN + +L GVPV+
Sbjct: 310 GETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVT 369
Query: 114 VHIWFD------------RKLKNA--YDHLLFSRSSLLSVYADMSVTC-KEYYSPNQ-SM 157
V + ++ R+LK A D+LL++ + S +AD+++ +YY Q ++
Sbjct: 370 VQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTL 429
Query: 158 LELVFAPAEEWISRSDSEIINATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTI 217
L+ V P + ++ + +II ++ +LFP + + + VVK +S+Y+
Sbjct: 430 LQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSS-----VVKIAQSLYREA 484
Query: 218 PNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 263
P +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 485 PGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYI 530
>AT3G04870.1 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE
DESATURASE); carotene 7,8-desaturase |
chr3:1342842-1346189 FORWARD
Length = 558
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 28/286 (9%)
Query: 1 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
C+L + F + S + L G+P L PI +I GG + L +++ +
Sbjct: 250 CMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSAD 309
Query: 61 VRSFLLNTG-------DVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVIN 113
+++ +++AD YV A V +K LLP W+E +FN + +L GVPV+
Sbjct: 310 GETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVT 369
Query: 114 VHIWFD------------RKLKNA--YDHLLFSRSSLLSVYADMSVTC-KEYYSPNQ-SM 157
V + ++ R+LK A D+LL++ + S +AD+++ +YY Q ++
Sbjct: 370 VQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTL 429
Query: 158 LELVFAPAEEWISRSDSEIINATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTI 217
L+ V P + ++ + +II ++ +LFP + + + VVK +S+Y+
Sbjct: 430 LQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSS-----VVKIAQSLYREA 484
Query: 218 PNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 263
P +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I
Sbjct: 485 PGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYI 530
>AT3G59050.1 | Symbols: ATPAO3 | ATPAO3 (Polyamine oxidase 3);
polyamine oxidase | chr3:21824932-21827173 REVERSE
Length = 488
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 32 PIVDHIQSLGGEVRLNSRIKKVELNNDGTVRSFLLNTGDVIEADAYVFATPVDILKLLLP 91
P+++ + S G ++RL+ RI K+ G GD ADA V A P+ +LK +
Sbjct: 230 PVINTL-SKGLDIRLSHRITKISRRYSGV--KVTTEKGDTFVADAAVIALPLGVLKSGM- 285
Query: 92 DSWKEIPYFNKLEKLVGVPVINVHIWFDRKLKNAYDHLLFSRSSLLSVYADMSVTCKEYY 151
I + KL + + ++ + + K+ +D++ + L V A+ S C +
Sbjct: 286 -----ITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFL 340
Query: 152 SPNQSMLE--LVFAPAEEWI----SRSDSEIINATMKELAKLFPD----------EIAAD 195
+ +++ LV+ PA + +SD N +L K+ PD +D
Sbjct: 341 NLHKATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSD 400
Query: 196 QSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 255
+ Y +V P +Y+ + R P++ + AG+ T Y S+ GA +
Sbjct: 401 INSLGSYSYDIVNKPHDLYERL----------RVPLDNLFFAGEATSSSYPGSVHGAYST 450
Query: 256 GKLCAQ 261
G L A+
Sbjct: 451 GVLAAE 456
>AT1G65840.1 | Symbols: ATPAO4, PAO4 | ATPAO4 (ARABIDOPSIS THALIANA
POLYAMINE OXIDASE 4); amine oxidase/ polyamine oxidase |
chr1:24490173-24492728 FORWARD
Length = 497
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 43 EVRLNSRIKKVELNNDGTVRSFLLNTGDVIEADAYVFATPVDILKLLLPDSWKEIPYFNK 102
++RLN R+ KV ++ V + G ADA + P+ +LK L E+P + K
Sbjct: 240 DIRLNHRVTKVVRTSNNKV-IVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQW-K 297
Query: 103 LEKLVGVPVINVHIWFDRKLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLE--L 160
+ G+ V N + K+ +D + L + A S C + + +++ L
Sbjct: 298 TSAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 161 VFAPA----EEWISRSDSEIINATMKELAKLFPD----------EIAADQSKAKILKYHV 206
V+ A ++ SD N M +L K+FPD D + Y V
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDV 412
Query: 207 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG----KLCAQA 262
V P +Y P PV+ + G+ ++ S GA L+G + C +
Sbjct: 413 VGMPEDLY----------PRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRY 462
Query: 263 IVQVLAA 269
I + L A
Sbjct: 463 IFERLGA 469
>AT2G43020.1 | Symbols: ATPAO2 | ATPAO2 (Polyamine oxidase 2); amine
oxidase/ electron carrier/ oxidoreductase |
chr2:17891945-17894440 FORWARD
Length = 490
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 32 PIVDHIQSLGGEVRLNSRIKKVELNNDGTVRSFLLNTGDVIEADAYVFATPVDILKLLLP 91
P+++ + G ++R+ R+ K+ +G G ADA V A P+ +LK
Sbjct: 229 PVINTLAK-GLDIRVGHRVTKIVRRYNGV--KVTTENGQTFVADAAVIAVPLGVLKS--- 282
Query: 92 DSWKEIPYFNKLEKLVGVPVINVHIWFDRKLKNAYDHLLFSRSSLLSVYADMSVTCKEYY 151
I + KL + + ++ + + K+ ++ + + + L V A+ S C +
Sbjct: 283 ---GTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFL 339
Query: 152 SPNQSMLE--LVFAPAEEWIS----RSDSEIINATMKELAKLFPDEI----------AAD 195
+ +++ LV+ PA + SD N + +L ++ PD + +D
Sbjct: 340 NLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSD 399
Query: 196 QSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLS 255
+ Y +V P +Y+ + R PV+ + AG+ T + S+ GA +
Sbjct: 400 VNSMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGSVHGAYST 449
Query: 256 GKLCAQ 261
G + A+
Sbjct: 450 GLMAAE 455