Jatropha Genome Database

JcCB0131911.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131911.20 + phase: 0 /partial
         (187 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63890.2 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);...   315   1e-86
AT5G63890.1 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);...   315   1e-86

>AT5G63890.2 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);
           histidinol dehydrogenase | chr5:25565600-25568104
           REVERSE
          Length = 466

 Score =  315 bits (807), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 148/186 (79%), Positives = 169/186 (90%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           MKSY+LSELS ++V+SLK+RPRIDF SIF+ V PI+D VRS GD AVK+YT RFDKV+L 
Sbjct: 32  MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 91

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
           K+VED+SEL  PELD+ V+EAFDVAYDNIYAFHLAQK+ EKSVENM+GVRCKRV R I S
Sbjct: 92  KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSIGS 151

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML++PAQIAGCKT+V+ATPP +DGSICKEVLYCAK+AGVTHIL
Sbjct: 152 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTHIL 211

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 212 KAGGAQ 217


>AT5G63890.1 | Symbols: ATHDH | ATHDH (HISTIDINOL DEHYDROGENASE);
           histidinol dehydrogenase | chr5:25565600-25567879
           REVERSE
          Length = 452

 Score =  315 bits (807), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 148/186 (79%), Positives = 169/186 (90%)

Query: 1   MKSYQLSELSRTEVESLKARPRIDFFSIFSIVTPIVDDVRSRGDAAVKDYTTRFDKVKLE 60
           MKSY+LSELS ++V+SLK+RPRIDF SIF+ V PI+D VRS GD AVK+YT RFDKV+L 
Sbjct: 18  MKSYRLSELSSSQVDSLKSRPRIDFSSIFATVNPIIDAVRSNGDNAVKEYTERFDKVQLN 77

Query: 61  KIVEDVSELPDPELDAAVREAFDVAYDNIYAFHLAQKAAEKSVENMQGVRCKRVPRCISS 120
           K+VED+SEL  PELD+ V+EAFDVAYDNIYAFHLAQK+ EKSVENM+GVRCKRV R I S
Sbjct: 78  KVVEDMSELSVPELDSNVKEAFDVAYDNIYAFHLAQKSTEKSVENMKGVRCKRVSRSIGS 137

Query: 121 VGLYVPGGTAVLPSTALMLSVPAQIAGCKTIVIATPPGQDGSICKEVLYCAKKAGVTHIL 180
           VGLYVPGGTAVLPSTALML++PAQIAGCKT+V+ATPP +DGSICKEVLYCAK+AGVTHIL
Sbjct: 138 VGLYVPGGTAVLPSTALMLAIPAQIAGCKTVVLATPPSKDGSICKEVLYCAKRAGVTHIL 197

Query: 181 KAGGAQ 186
           KAGGAQ
Sbjct: 198 KAGGAQ 203