Jatropha Genome Database

JcCB0131141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131141.10 + phase: 0 /pseudo
         (202 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38800.1 | Symbols: ATMTN1, ATMTAN1, MTN1, MTAN1 | ATMTN1; ca...   215   2e-56
AT4G34840.1 | Symbols: ATMTN2, ATMTAN2, MTN2, MTAN2 | ATMTN2; me...   195   2e-50

>AT4G38800.1 | Symbols: ATMTN1, ATMTAN1, MTN1, MTAN1 | ATMTN1;
           catalytic/ methylthioadenosine nucleosidase |
           chr4:18113355-18114996 REVERSE
          Length = 267

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 2/172 (1%)

Query: 1   MAPHGEG-SDAAGDTTVVQAE-QRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGV 58
           MAPHG+G SD        Q+E  RPIS+++ +IAMQ EA+P+VNKF L E   +   KG+
Sbjct: 1   MAPHGDGLSDIEEPEVDAQSEILRPISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGL 60

Query: 59  PWVWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXX 118
           PWV YHGV+ DL IN+V PG+D  LG+DSVGTV ASL+T+A+IQAL+PD+IIN       
Sbjct: 61  PWVLYHGVHKDLRINVVCPGRDAALGIDSVGTVPASLITFASIQALKPDIIINAGTCGGF 120

Query: 119 XXXXXSIGDVYLASDVAFHDRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
                +IGDV+L SDV FHDRRIPIP+FDLYGVGLR+A+STPNLLKELNLK+
Sbjct: 121 KVKGANIGDVFLVSDVVFHDRRIPIPMFDLYGVGLRQAFSTPNLLKELNLKI 172


>AT4G34840.1 | Symbols: ATMTN2, ATMTAN2, MTN2, MTAN2 | ATMTN2;
           methylthioadenosine nucleosidase |
           chr4:16606299-16607748 FORWARD
          Length = 254

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/153 (58%), Positives = 113/153 (73%)

Query: 18  QAEQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWP 77
           Q E+RPIS I+ I+AMQ EA P++N+ +L E+ +  FPK V W+ + G+Y DLNIN+V P
Sbjct: 7   QVEKRPISTIVFIVAMQKEAQPLINRLRLVEEVNTPFPKEVTWIMFKGMYKDLNINIVCP 66

Query: 78  GKDPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFH 137
           GKD  LGV+SVGTV ASL+TYA+I A+QPDLIIN             I DVY+ S VAFH
Sbjct: 67  GKDSTLGVESVGTVPASLVTYASILAIQPDLIINAGTAGGFKAKGACISDVYVVSTVAFH 126

Query: 138 DRRIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
           DRRIP+PV D+YGVG+R  + TPNL+KELNLKV
Sbjct: 127 DRRIPVPVLDIYGVGMRNTFPTPNLIKELNLKV 159