Jatropha Genome Database

JcCB0130751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.10 + phase: 2 /pseudo/partial
         (272 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02860.1 | Symbols:  | catalytic | chr4:1268952-1270508 REVERSE    256   1e-68
AT1G03210.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   245   2e-65
AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   235   3e-62

>AT4G02860.1 | Symbols:  | catalytic | chr4:1268952-1270508 REVERSE
          Length = 313

 Score =  256 bits (654), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 125/222 (56%), Positives = 172/222 (77%), Gaps = 7/222 (3%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETS--NDKSKEG--FL 112
           + ++ LC HATLA++H LFSN LV+S+++EF T SGILTAK++ +TS  +D   +G  FL
Sbjct: 93  LAEVDLCGHATLASAHCLFSNGLVDSDMVEFVTRSGILTAKRVSDTSELSDGEVKGGTFL 152

Query: 113 IELDFPVVPTIEFNSVDLAP--ISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELEPQ 170
           IEL+FPVV T + N  D++   I+KALNGA+I+DIK TA ++++ +V+PS + VTEL+P+
Sbjct: 153 IELNFPVVTTCDVNLSDVSSSMITKALNGATIVDIKATA-TNNILVVLPSKESVTELQPR 211

Query: 171 FDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKLGK 230
            D++LK P  G+IVT    + S +DFYSR+F PK GV+EDPVCGSAHC++A YWS K+ K
Sbjct: 212 MDDILKCPCDGIIVTAAGSTGSSYDFYSRYFAPKFGVDEDPVCGSAHCALAHYWSIKMNK 271

Query: 231 CDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
            DF+AYQAS+R G + IH D++KQRVLLRGKAV+VMEG + V
Sbjct: 272 FDFLAYQASSRSGTIRIHLDKEKQRVLLRGKAVTVMEGHVLV 313


>AT1G03210.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr1:782948-784240 FORWARD
          Length = 286

 Score =  245 bits (626), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 7/218 (3%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETSNDKSKEGFLIELD 116
           + ++ LC HATLA++H LFS  LV S  +EF TLSGILTAK +    ND   E   IELD
Sbjct: 74  VAEVDLCGHATLASAHVLFSTGLVGSETVEFDTLSGILTAKHL---KNDDDGEESSIELD 130

Query: 117 FPVVPTIEFNSVD--LAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELEPQFDEV 174
           FPVVPT E N +D  L+  SKALNGA+I+D+K  A   DL +V+ S + V +L+P+ DE+
Sbjct: 131 FPVVPTYEVNYIDDDLSLFSKALNGATILDVK--ATKKDLLVVLSSWEAVIDLKPRLDEI 188

Query: 175 LKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKLGKCDFM 234
            K P  G++VT  A   S +DF SR+F P+ G+NEDPV GSAHC++A YWS ++ KCDF 
Sbjct: 189 SKCPCEGMMVTAAASDGSTYDFCSRYFAPRFGINEDPVTGSAHCALAHYWSLRMNKCDFF 248

Query: 235 AYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           AYQAS+RGG L +H D++KQRVLLRGKAV+VMEG + V
Sbjct: 249 AYQASSRGGTLKVHLDKEKQRVLLRGKAVTVMEGYVLV 286


>AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr4:1266535-1268569 REVERSE
          Length = 306

 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/233 (48%), Positives = 167/233 (71%), Gaps = 20/233 (8%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLV-NSNIIEFATLSGILTAKKIPETSNDKSKEGFLIEL 115
           + ++ +C HATLA++H++FSN+LV +S+ +EF+T SGILTAK++   S+  SK  FLIE+
Sbjct: 77  VAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGILTAKRL---SDCDSKRSFLIEM 133

Query: 116 DFPVVPTIEFNSVDLAPISKALNGASIIDIK----------------RTAVSDDLFIVVP 159
           +FPV+ T E++S D++  SKALNGA+I+D++                +T  +D + +V+ 
Sbjct: 134 NFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLIFKPLIGAFKTTSTDQIIVVLS 193

Query: 160 SAKVVTELEPQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCS 219
           S + V E +P+ D+++K PG+ +IVT  AP  S FDF SR F PK+G+NED VCGSAHCS
Sbjct: 194 SWESVIEFQPRVDDIVKCPGKVMIVTAAAPQGSPFDFCSRLFAPKLGLNEDSVCGSAHCS 253

Query: 220 IAPYWSKKLGKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           +A YWS K+ KCDF+A+ AS R G L +H+D++KQRVLL GKAV+VM+G + V
Sbjct: 254 LAHYWSLKMNKCDFVAFAASQRSGTLKVHYDKEKQRVLLTGKAVTVMKGSILV 306